View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_403 (Length: 230)
Name: NF9839A_low_403
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_403 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 8927791 - 8927562
Alignment:
| Q |
1 |
ggtattggaggagacgaactcctttcatatcatactcacttcatcaacgtatatggaaatcctgagaaagcttatcataacgccattgctgtaagaggaa |
100 |
Q |
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| T |
8927791 |
ggtattggaggagacgaactgctttcatatcatactcacttcatcaacgtatatggaaatcctgagaaagcttatcataacgccattgctgtaagaggaa |
8927692 |
T |
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| Q |
101 |
cttctatttatatacttggtccaacacatcttatcatttctcgtcttctcccttggaaagagcgtatcttggttttacggaaagcaggtgactggatggg |
200 |
Q |
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| T |
8927691 |
cttctatttatatacttggtccaacacatcttatcatttctcgtcttctcccttggaaagagcgtatcttggttttacggaaagcaggtgactggatggg |
8927592 |
T |
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| Q |
201 |
tgccttgaacatggcaatgactctttatga |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
8927591 |
tgccttgaacatggcaatgactctttatga |
8927562 |
T |
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