View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_410 (Length: 230)
Name: NF9839A_low_410
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_410 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 28250022 - 28249828
Alignment:
| Q |
36 |
cacagcggttttcacaccgggagaactcaaacaatcattctccgtccctatgctgcgtgtggcgaaaaccgtcgatatgtacctcgctgaaatcgccgcg |
135 |
Q |
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| T |
28250022 |
cacagcggttttcacaccgggagaactcaaacaatcattctccgtccctatgctgcgtgtggcgaaaaccgtcgacatgtacctcgctgaaatcgccgcg |
28249923 |
T |
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| Q |
136 |
tacggtgaactcagcatctcaaaattcaacggaatcgctgttcttattcctaaacacgcgcgtaaaatcgacgatgatctttaccgcgccgttga |
230 |
Q |
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| T |
28249922 |
tacggtgaactcagcatctcaaaattcaacggaatcgctgttcttattcctaaacacgcgcgtaaaatcgacgatgatctttaccgcgccgttga |
28249828 |
T |
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