View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_493 (Length: 219)
Name: NF9839A_low_493
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_493 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 2337373 - 2337190
Alignment:
| Q |
22 |
ctaagggcaggtaagagaggaaagcttgagaagataggggaatttactatgtcctacgttgagacaccaaacatgagtgagattcattggattcctgacc |
121 |
Q |
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| T |
2337373 |
ctaagggcaggtaagagaggaaagcttgagaagataggagaatttactatgtcctacgttgagacaccaaacatgagtgagattcattggattcctgacc |
2337274 |
T |
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| Q |
122 |
caacaaattctaagaagtatatccaagagtatgtcatatctccccattcccgtgccttctctccaattttgtagattttgatgt |
205 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
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| T |
2337273 |
caacaaatcctaagaagtatatccaagagtatgtcatatctcctcattcccgtgccttctctccagttttgtagattttgatgt |
2337190 |
T |
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