View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_495 (Length: 219)
Name: NF9839A_low_495
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_495 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 11 - 206
Target Start/End: Complemental strand, 10545613 - 10545418
Alignment:
| Q |
11 |
tggttacttactttaccgacctaaagtgcttctgttcatcagaggattagtggtgtttgttttgttttatccgaggtagattaggggtctttgttttgtt |
110 |
Q |
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| T |
10545613 |
tggtcacttactttaccgacctaaagtgtttctgttcatcagaggattagtggtgtttgttttgttttatccgaggtagattagtggtctttgttttgtt |
10545514 |
T |
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| Q |
111 |
ttattggagatttaatgttaaccacatcaactcaatctattactaatcactaatattttaattactatagataaaaacaaataaaacttcacatta |
206 |
Q |
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| T |
10545513 |
ttactggagatttaatgttaaccacatcaactcaatctattactaatcactaatattttaattactatacataaaaacaaataaaacttcacatta |
10545418 |
T |
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