View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9839A_low_508 (Length: 214)
Name: NF9839A_low_508
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9839A_low_508 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 22 - 193
Target Start/End: Complemental strand, 46844701 - 46844530
Alignment:
| Q |
22 |
tggtcacggcattcgtggctgcaaaatgccatctcacccctgcaatgcaataatgcaactaggttcaagatctcatggtattcactatcattccttcaag |
121 |
Q |
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| T |
46844701 |
tggtcacggcattcatggctgcaaaatgccatctcacccctgcaatgcaataatgcaactaggttcaagatctcatggtattcactatcattccttcaag |
46844602 |
T |
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| Q |
122 |
gaatcgttctaattctaatcggacacaaattagcaaatcatactttcctttgatgtaataagacagacacgg |
193 |
Q |
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|||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
46844601 |
gaatcggtctaattctaatcggacacaaattagcaaattatactttcctttgatgtaataagacagacacgg |
46844530 |
T |
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