View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_524 (Length: 209)

Name: NF9839A_low_524
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_524
NF9839A_low_524
[»] chr7 (16 HSPs)
chr7 (9-189)||(23642290-23642470)
chr7 (22-137)||(17924547-17924662)
chr7 (20-137)||(45147448-45147565)
chr7 (22-134)||(15364839-15364951)
chr7 (22-163)||(27107033-27107176)
chr7 (32-134)||(14937246-14937348)
chr7 (22-163)||(7824768-7824911)
chr7 (22-159)||(13455619-13455758)
chr7 (32-137)||(4440824-4440929)
chr7 (22-163)||(17144520-17144663)
chr7 (22-134)||(21673792-21673904)
chr7 (36-189)||(13353992-13354147)
chr7 (76-120)||(15625465-15625509)
chr7 (75-120)||(321349-321394)
chr7 (76-120)||(11771554-11771598)
chr7 (85-125)||(15204527-15204567)
[»] chr8 (16 HSPs)
chr8 (22-189)||(25283275-25283444)
chr8 (33-189)||(25283049-25283207)
chr8 (22-159)||(20652026-20652165)
chr8 (22-137)||(23156705-23156820)
chr8 (22-137)||(21196195-21196310)
chr8 (22-163)||(22316136-22316279)
chr8 (25-137)||(16876791-16876903)
chr8 (22-163)||(21850030-21850173)
chr8 (78-163)||(22283949-22284036)
chr8 (33-120)||(23655917-23656004)
chr8 (76-120)||(22377201-22377245)
chr8 (76-120)||(22383376-22383420)
chr8 (33-120)||(1267228-1267315)
chr8 (33-120)||(31416178-31416265)
chr8 (47-120)||(23949909-23949982)
chr8 (76-120)||(20395879-20395923)
[»] scaffold0567 (1 HSPs)
scaffold0567 (22-137)||(10232-10347)
[»] chr4 (9 HSPs)
chr4 (22-137)||(12342115-12342230)
chr4 (22-163)||(16028989-16029133)
chr4 (22-163)||(9291714-9291857)
chr4 (22-163)||(13248524-13248667)
chr4 (55-163)||(14998195-14998305)
chr4 (22-163)||(15292408-15292551)
chr4 (33-120)||(15414287-15414374)
chr4 (76-120)||(1648581-1648625)
chr4 (76-120)||(14160394-14160438)
[»] chr5 (7 HSPs)
chr5 (20-189)||(25243780-25243951)
chr5 (20-189)||(25307932-25308103)
chr5 (22-163)||(21936620-21936763)
chr5 (34-163)||(23504235-23504366)
chr5 (22-163)||(24582003-24582146)
chr5 (22-163)||(27011877-27012020)
chr5 (76-120)||(21890245-21890289)
[»] scaffold0160 (1 HSPs)
scaffold0160 (22-137)||(8203-8318)
[»] chr3 (16 HSPs)
chr3 (22-194)||(15095482-15095656)
chr3 (33-137)||(6711909-6712013)
chr3 (22-163)||(13966829-13966972)
chr3 (22-163)||(16257652-16257795)
chr3 (22-163)||(30138314-30138457)
chr3 (22-163)||(30147865-30148008)
chr3 (22-137)||(8273888-8274003)
chr3 (22-163)||(16742192-16742335)
chr3 (22-137)||(6152341-6152455)
chr3 (22-137)||(18749201-18749316)
chr3 (22-163)||(15610612-15610754)
chr3 (22-163)||(17193602-17193745)
chr3 (34-120)||(18133836-18133922)
chr3 (33-137)||(10419534-10419638)
chr3 (22-114)||(12792700-12792792)
chr3 (76-120)||(15248690-15248734)
[»] chr6 (14 HSPs)
chr6 (22-192)||(15077761-15077933)
chr6 (22-163)||(16098793-16098936)
chr6 (22-163)||(16381768-16381911)
chr6 (22-163)||(23027111-23027254)
chr6 (22-163)||(1648209-1648352)
chr6 (30-163)||(18572394-18572529)
chr6 (30-163)||(18837311-18837446)
chr6 (22-137)||(21927976-21928091)
chr6 (22-137)||(35275481-35275596)
chr6 (25-163)||(14624755-14624895)
chr6 (25-163)||(23996991-23997131)
chr6 (22-163)||(16233771-16233914)
chr6 (75-120)||(15896882-15896927)
chr6 (33-137)||(15460107-15460211)
[»] scaffold0589 (1 HSPs)
scaffold0589 (22-163)||(9896-10039)
[»] scaffold0369 (1 HSPs)
scaffold0369 (22-163)||(372-515)
[»] scaffold0310 (1 HSPs)
scaffold0310 (22-163)||(13990-14133)
[»] scaffold0205 (1 HSPs)
scaffold0205 (22-163)||(9320-9463)
[»] scaffold0162 (1 HSPs)
scaffold0162 (22-163)||(13818-13961)
[»] scaffold0117 (1 HSPs)
scaffold0117 (22-163)||(677-820)
[»] scaffold0218 (1 HSPs)
scaffold0218 (23-163)||(3198-3340)
[»] scaffold0058 (1 HSPs)
scaffold0058 (22-189)||(75442-75611)
[»] scaffold0876 (1 HSPs)
scaffold0876 (24-163)||(3452-3593)
[»] scaffold0610 (1 HSPs)
scaffold0610 (24-163)||(8145-8286)
[»] chr2 (10 HSPs)
chr2 (20-137)||(12640021-12640138)
chr2 (22-160)||(21905959-21906099)
chr2 (22-163)||(22276788-22276931)
chr2 (22-163)||(24569458-24569601)
chr2 (22-137)||(22761359-22761474)
chr2 (22-163)||(23816833-23816976)
chr2 (25-163)||(24830981-24831120)
chr2 (85-163)||(25129157-25129236)
chr2 (84-125)||(24819538-24819579)
chr2 (76-120)||(45530066-45530110)
[»] scaffold0692 (1 HSPs)
scaffold0692 (22-163)||(3128-3271)
[»] scaffold0225 (1 HSPs)
scaffold0225 (22-163)||(24304-24447)
[»] scaffold0207 (1 HSPs)
scaffold0207 (22-163)||(18957-19100)
[»] scaffold0132 (1 HSPs)
scaffold0132 (22-163)||(15566-15709)
[»] scaffold0076 (1 HSPs)
scaffold0076 (22-163)||(41168-41311)
[»] chr1 (4 HSPs)
chr1 (22-163)||(20830714-20830857)
chr1 (30-137)||(22134887-22134994)
chr1 (73-137)||(21201664-21201728)
chr1 (76-120)||(20139769-20139813)
[»] scaffold0021 (3 HSPs)
scaffold0021 (22-137)||(72127-72242)
scaffold0021 (22-159)||(24877-25015)
scaffold0021 (22-137)||(32666-32781)
[»] scaffold0327 (1 HSPs)
scaffold0327 (23-137)||(8107-8221)
[»] scaffold0077 (1 HSPs)
scaffold0077 (34-163)||(27531-27662)
[»] scaffold0235 (1 HSPs)
scaffold0235 (22-137)||(26744-26859)
[»] scaffold0124 (1 HSPs)
scaffold0124 (22-137)||(7061-7176)
[»] scaffold0120 (1 HSPs)
scaffold0120 (22-137)||(23114-23229)
[»] scaffold0266 (1 HSPs)
scaffold0266 (30-163)||(9122-9257)
[»] scaffold0028 (1 HSPs)
scaffold0028 (34-163)||(105838-105969)
[»] scaffold0554 (1 HSPs)
scaffold0554 (22-160)||(4071-4211)
[»] scaffold0302 (1 HSPs)
scaffold0302 (22-163)||(6085-6227)
[»] scaffold0011 (4 HSPs)
scaffold0011 (22-163)||(180834-180977)
scaffold0011 (76-120)||(25840-25884)
scaffold0011 (76-120)||(149525-149569)
scaffold0011 (76-120)||(195011-195055)
[»] scaffold0008 (1 HSPs)
scaffold0008 (86-163)||(24790-24869)
[»] scaffold0387 (1 HSPs)
scaffold0387 (22-123)||(15028-15129)
[»] scaffold0066 (1 HSPs)
scaffold0066 (55-163)||(47064-47174)
[»] scaffold0047 (1 HSPs)
scaffold0047 (86-137)||(587-638)
[»] scaffold0243 (1 HSPs)
scaffold0243 (31-132)||(430-531)
[»] scaffold0808 (1 HSPs)
scaffold0808 (95-163)||(380-450)
[»] scaffold0023 (1 HSPs)
scaffold0023 (85-163)||(55216-55296)
[»] scaffold0100 (1 HSPs)
scaffold0100 (62-120)||(25012-25070)
[»] scaffold0222 (1 HSPs)
scaffold0222 (33-120)||(2619-2706)
[»] scaffold0049 (1 HSPs)
scaffold0049 (75-120)||(51169-51214)
[»] scaffold0053 (1 HSPs)
scaffold0053 (33-125)||(48298-48390)
[»] scaffold0010 (2 HSPs)
scaffold0010 (76-120)||(2869-2913)
scaffold0010 (34-120)||(46664-46750)
[»] scaffold0411 (1 HSPs)
scaffold0411 (62-120)||(14372-14430)
[»] scaffold0403 (1 HSPs)
scaffold0403 (38-120)||(3746-3828)
[»] scaffold0270 (2 HSPs)
scaffold0270 (76-118)||(4828-4870)
scaffold0270 (76-118)||(11958-12000)
[»] scaffold0090 (2 HSPs)
scaffold0090 (34-120)||(19804-19890)
scaffold0090 (34-120)||(23966-24052)
[»] scaffold0682 (1 HSPs)
scaffold0682 (76-137)||(821-882)
[»] scaffold0074 (1 HSPs)
scaffold0074 (23-120)||(4095-4192)
[»] scaffold0018 (2 HSPs)
scaffold0018 (84-125)||(11512-11553)
scaffold0018 (84-125)||(17704-17745)
[»] scaffold0342 (1 HSPs)
scaffold0342 (76-120)||(18522-18566)
[»] scaffold0331 (1 HSPs)
scaffold0331 (76-120)||(17284-17328)
[»] scaffold0326 (1 HSPs)
scaffold0326 (76-120)||(17844-17888)
[»] scaffold0228 (1 HSPs)
scaffold0228 (76-120)||(651-695)
[»] scaffold0126 (1 HSPs)
scaffold0126 (76-120)||(41872-41916)
[»] scaffold0040 (1 HSPs)
scaffold0040 (76-120)||(15832-15876)
[»] scaffold0020 (1 HSPs)
scaffold0020 (76-120)||(100859-100903)
[»] scaffold0012 (1 HSPs)
scaffold0012 (76-120)||(218724-218768)
[»] scaffold0001 (2 HSPs)
scaffold0001 (76-120)||(89752-89796)
scaffold0001 (76-120)||(90430-90474)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 23642470 - 23642290
Alignment:
Q  9 agatggacatcaacttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagagg 108  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||    
T  23642470 agatgtacatcaacttaagaagcagattttgcaagaaggttacatgagtaatatgagtattcatccaggagcgacaaagatgtatcaggatttgaagagg 23642371  T
Q  109 ttgttttggtggcctagaatgaagaaggacatatgagtttgtgtatgcttgtttgtttttgtcaaagtctaacattgaaca 189  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23642370 ttgttttggtggcctggaatgaagaaggacatatgagtttgtgtatgcttgtttgattttgtcaaagtctaacattgaaca 23642290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 17924662 - 17924547
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||||| ||||||| ||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  17924662 cttaagagacagattttggacgaaggtcacaggagtagtctgagtattcatccaggagcgacgaagatgtattaggatttgaagaggttgttttggtggc 17924563  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  17924562 ctggaatgaagaagga 17924547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 45147565 - 45147448
Alignment:
Q  20 aacttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtg 119  Q
    |||||||||  || |||||||  |||||||||| ||||||| ||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||    
T  45147565 aacttaagagacaaattttggttgaaggtcacaggagtagtctgagtattcatccaggagcgaataagatgtatcaggatttgaagaggttgttttggtg 45147466  T
Q  120 gcctagaatgaagaagga 137  Q
    |||| |||||||||||||    
T  45147465 gcctggaatgaagaagga 45147448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 15364951 - 15364839
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  15364951 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatctaggagcgacgaagatgtattaggatttgaagaggttgttttggtggc 15364852  T
Q  122 ctagaatgaagaa 134  Q
    |||||||||||||    
T  15364851 ctagaatgaagaa 15364839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 27107033 - 27107176
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  27107033 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 27107132  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  27107133 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 27107176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 14937348 - 14937246
Alignment:
Q  32 agattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaa 131  Q
    |||||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  14937348 agattttggacgaaggtcatagaagtagtttgagtattcatctaggagcgacgaagatgtattaggatttgaagaggttgttttggtggcctagaatgaa 14937249  T
Q  132 gaa 134  Q
    |||    
T  14937248 gaa 14937246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 7824911 - 7824768
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||| |||||||||| ||||||||||||||||    
T  7824911 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtattaggatttgaaaaggttgttttggtggc 7824812  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  7824811 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 7824768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 13455758 - 13455619
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||| ||||||||||| |||| ||| |  |||||| ||||||||||   ||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  13455758 cttaagaaacagattttggacgaagatcatagaagtagtttgagtattcatccaggagcgacgaagatgtattaggatttgaagaggttgttatggtggc 13455659  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttg 159  Q
    || ||||||||||||| ||   ||||||||| ||||||||    
T  13455658 ctggaatgaagaaggagattgctgagtttgtttatgcttg 13455619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 4440929 - 4440824
Alignment:
Q  32 agattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaa 131  Q
    |||||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||||||||||| |||||||||||||||||| || |||||||    
T  4440929 agattttggacgaaggtcatagaagtagtttgagtattcatccaggagcgacgaagatgtatcaggatttaaagaggttgttttggtggtctggaatgaa 4440830  T
Q  132 gaagga 137  Q
    ||||||    
T  4440829 gaagga 4440824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 17144520 - 17144663
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||||||||||||||||||| ||| | | ||||||| ||||||||||   | ||||||| ||||||||||| ||||||||||| ||| || |||||     
T  17144520 cttaagaagcagattttggaagagggttataggagtagtctgagtattcatccatgagcgacgaagatgtatcaagatttgaagagattgcttaggtggt 17144619  T
Q  122 ctagaatgaagaaggacata--tgagtttgtgtatgcttgtttg 163  Q
    |||||||||| | ||| |||   |||||||||||||||||||||    
T  17144620 ctagaatgaaaagggaaatagcggagtttgtgtatgcttgtttg 17144663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 21673792 - 21673904
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||||| | ||||| ||||||||||   || |||||| |||||||||||||||||||||| ||||||||||||||    
T  21673792 cttaagagacagattttggacgaaggtcacaggggtagtctgagtattcatccagaagcgactaagatgtatcaggatttgaagatgttgttttggtggc 21673891  T
Q  122 ctagaatgaagaa 134  Q
    || || |||||||    
T  21673892 ctggactgaagaa 21673904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 13354147 - 13353992
Alignment:
Q  36 tttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaag 135  Q
    |||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  13354147 tttggacgaaggtcatagaagtagtttgagtattcatccaggagcaacgaagatgtatcaggatttgaagagattgttttggtggactggaatgaagaag 13354048  T
Q  136 gacat--atgagtttgtgtatgcttgtttgtttttgtcaaagtctaacattgaaca 189  Q
    || ||    |||||||| |||||||||||| |||  |  |||||||| ||||||||    
T  13354047 gagatcgcagagtttgtttatgcttgtttggtttgttagaagtctaagattgaaca 13353992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 15625509 - 15625465
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||    
T  15625509 ggagctacaaagatgtatcatgatttgaagaagttgttttggtgg 15625465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 321349 - 321394
Alignment:
Q  75 aggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||| || ||||||||||| |||||||||| |||||||||||||    
T  321349 aggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 11771554 - 11771598
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  11771554 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 11771598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 15204567 - 15204527
Alignment:
Q  85 aagatgtatcaggatttgaagaggttgttttggtggcctag 125  Q
    ||||||||||| |||||||||| ||||||||||||| ||||    
T  15204567 aagatgtatcatgatttgaagaagttgttttggtggtctag 15204527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 25283444 - 25283275
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||||||||||||||||||||||||||| ||||||| | ||||||||   ||||| ||| ||||||||||||||||||||||  |||||||||||||    
T  25283444 cttaagaagcagattttggaagaaggtcacaagagtagtttaagtattcatctaggagtgacgaagatgtatcaggatttgaagaaattgttttggtggc 25283345  T
Q  122 ctagaatgaagaaggacatat--gagtttgtgtatgcttgtttgtttttgtca-aagtctaacattgaaca 189  Q
    |  ||||||||||||| ||||  |||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  25283344 caggaatgaagaaggatatataggagtttgtgtatgcttgtttg-gtttgtcagaagtctaagattgaaca 25283275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 189
Target Start/End: Complemental strand, 25283207 - 25283049
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaag 132  Q
    |||||||||||||||||||| ||||||| | ||||||||   ||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||    
T  25283207 gattttggaagaaggtcacaggagtagtttaagtattcatctaggagcgacgaagatgtatcaggatttgaagaagttgttttggtggccaggaatgaag 25283108  T
Q  133 aaggacatat--gagtttgtgtatgcttgtttgtttttgtca-aagtctaacattgaaca 189  Q
    ||||| ||||  |||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  25283107 aaggatatatcagagtttgtgtatgcttgtttg-gtttgtcagaagtctaagattgaaca 25283049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 20652026 - 20652165
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||||||||||||| ||||||| |  |||||| ||||||||||   ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  20652026 cttaagaggcagattttggaaaaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgaatcaggatttgaagaggttgttttggtggc 20652125  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttg 159  Q
    || ||||||||||||| ||   ||||||||||||||||||    
T  20652126 ctggaatgaagaaggaaattgctgagtttgtgtatgcttg 20652165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 23156705 - 23156820
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||| | ||||||| ||||||||||   ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  23156705 cttaagagacagattttggacgaaggtcataagagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaggttgtttttgtggc 23156804  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  23156805 ctggaatgaagaagga 23156820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 21196195 - 21196310
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| |  |||||| ||||||||||   ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  21196195 cttaagaggcagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagatgttgttttggtggc 21196294  T
Q  122 ctagaatgaagaagga 137  Q
    || ||||||| |||||    
T  21196295 ctggaatgaaaaagga 21196310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 22316279 - 22316136
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||||||||||||||| |||||||||||||    
T  22316279 cttaagagacagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaacgaagatgtatcaggatttgaagagattgttttggtggc 22316180  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||    |||||||| ||||||||||||    
T  22316179 ctggaatgaagaaggagatcacagagtttgtttatgcttgtttg 22316136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 16876791 - 16876903
Alignment:
Q  25 aagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggccta 124  Q
    |||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||||     
T  16876791 aagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggcctg 16876890  T
Q  125 gaatgaagaagga 137  Q
    |||||||||||||    
T  16876891 gaatgaagaagga 16876903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 21850030 - 21850173
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| |||||||| ||||||||| ||||||    
T  21850030 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaaaaggttgtttcggtggc 21850129  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  21850130 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 21850173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 22284036 - 22283949
Alignment:
Q  78 agcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaaggacata--tgagtttgtgtatgcttgtttg 163  Q
    |||||| ||||||||||||||| |||||| |||||||||||||| | ||||||||||||| |||  ||||||||||||||||||||||    
T  22284036 agcgacgaagatgtatcaggatctgaagaagttgttttggtggcatggaatgaagaaggatatagctgagtttgtgtatgcttgtttg 22283949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 23656004 - 23655917
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||| ||||||||||||||| ||||||  | ||||||||    ||||| |||||||||||||| |||||||||| | |||||||||||    
T  23656004 gattctggaagaaggtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcatgatttgaagaagctgttttggtgg 23655917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 22377201 - 22377245
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||    
T  22377201 ggagctacaaagatgtatcatgatttgaagaagttgttttggtgg 22377245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 22383376 - 22383420
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||    
T  22383376 ggagctacaaagatgtatcatgatttgaagaagttgttttggtgg 22383420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 1267315 - 1267228
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||| |||||| |||||| ||||||  ||||||||||   |||||| ||||||||||| || |||||||| | | |||||||||||    
T  1267315 gattttagaagaaagtcacaagagtagcttgagtattcatccaggagctacaaagatgtaccatgatttgaaaaagctgttttggtgg 1267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 31416178 - 31416265
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||| |||||| |||||| ||||||  ||||||||||    ||||| ||||||||||| || |||||||||| | |||||||||||    
T  31416178 gattttagaagaaagtcacaagagtagcttgagtattcatccgggagctacaaagatgtaccatgatttgaagaagctgttttggtgg 31416265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 23949982 - 23949909
Alignment:
Q  47 gtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||||| |||||  ||||||||||    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  23949982 gtcacataagtagcttgagtattcatccgggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 23949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 20395879 - 20395923
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||    
T  20395879 ggagctacaaagatgtatcatgatttgaagaaattgttttggtgg 20395923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 10347 - 10232
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| | ||||||| ||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10347 cttaagaggcagattttggacgaaggtcataggagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaggttgttttggtggc 10248  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  10247 ctggaatgaagaagga 10232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 2e-35; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 12342115 - 12342230
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||   ||||| |||||||||||||||||||||||||||||| ||||  ||||    
T  12342115 cttaagaagcagattttggaagaaggtcacatgagtagtctaagtattcatccaggagtgacaaagatgtatcaggatttgaagaggttattttactggc 12342214  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  12342215 ctggaatgaagaagga 12342230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 16029133 - 16028989
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg- 120  Q
    |||||||||| |||||| || || ||| ||||||||||| | ||||||||   ||||||||| |||||||||||||||||||| |||||||||||||||     
T  16029133 cttaagaagcggattttagaggagggttacatgagtagtcttagtattcatccaggagcgacgaagatgtatcaggatttgaaaaggttgttttggtggc 16029034  T
Q  121 cctagaatgaagaaggacata--tgagtttgtgtatgcttgtttg 163  Q
    ||| ||||||||||||| |||   |||||| ||||||||||||||    
T  16029033 cctggaatgaagaaggatataacagagtttatgtatgcttgtttg 16028989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 9291857 - 9291714
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| || ||||| |  |||||| ||||||||||   ||||||||  ||||||||||| |||||||| ||||||||||||||||    
T  9291857 cttaagaggcaaattttggacgagggtcatagaagtagtttgagtattcatctaggagcgattaagatgtatcaagatttgaaaaggttgttttggtggc 9291758  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  9291757 ctggaatgaagaaggaaattgctgagtttgtttatgcttgtttg 9291714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 13248667 - 13248524
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| |  |||||| ||||||| || | |||||| || ||||||||||| |||||||||||||||||||||| ||    
T  13248667 cttaagaggcagattttggacgaaggtcatagaagtagtttgagtatgcattcaggagcaactaagatgtatcaagatttgaagaggttgttttggttgc 13248568  T
Q  122 ctagaatgaagaaggaca--tatgagtttgtgtatgcttgtttg 163  Q
     |  |||||||||||| |  | ||||||||| ||||||||||||    
T  13248567 ttttaatgaagaaggatatttttgagtttgtttatgcttgtttg 13248524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 14998305 - 14998195
Alignment:
Q  55 agtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaaggacat--atgagtttgtgt 152  Q
    |||||| |||||||||| | ||||||||| || |||||||| |||||||| |||||||||||||||||| ||||||||||||| ||   ||||||||| |    
T  14998305 agtagtttgagtattcattcaggagcgactaaaatgtatcaagatttgaaaaggttgttttggtggcctggaatgaagaaggagatcgctgagtttgttt 14998206  T
Q  153 atgcttgtttg 163  Q
    |||||||||||    
T  14998205 atgcttgtttg 14998195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 15292408 - 15292551
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| |||||||| |||||||||||||||     
T  15292408 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaaaaggttgttttggtggt 15292507  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||| ||| ||||||||||||    
T  15292508 ctggaatgaagaaggagatcgctgagtatgtttatgcttgtttg 15292551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 15414287 - 15414374
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||||||||||| ||||||  |||||| | ||||||||   |||||| |||||||||||||| || |||||||  ||||||||||||    
T  15414287 gattttggaagaaagtcacagaagtagtttaagtattcatccaggagctacaaagatgtatcatgacttgaagaaattgttttggtgg 15414374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 1648581 - 1648625
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| ||||||||||| || |||||||||| |||||||||||||    
T  1648581 ggagctacaaagatgtaccatgatttgaagaagttgttttggtgg 1648625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 14160438 - 14160394
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  14160438 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 14160394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 25243780 - 25243951
Alignment:
Q  20 aacttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtg 119  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||   ||||||||| ||||||||||| ||||| |||| |||||||||| |    
T  25243780 aacttaagaagcggattttagaagagggtcacatgagtagtctgagtattcatctaggagcgacgaagatgtatcaagatttaaagatgttgttttggcg 25243879  T
Q  120 gcctagaatgaagaaggacat--atgagtttgtgtatgcttgtttgtttttgtca-aagtctaacattgaaca 189  Q
    |||| || |||||||||| ||  ||||||||||| |||||||||||  ||||||| |||||||| ||||||||    
T  25243880 gcctggagtgaagaaggatataaatgagtttgtgcatgcttgtttg-atttgtcagaagtctaagattgaaca 25243951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 25307932 - 25308103
Alignment:
Q  20 aacttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtg 119  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||   ||||||||| ||||||||||| ||||| |||| |||||||||| |    
T  25307932 aacttaagaagcggattttagaagagggtcacatgagtagtctgagtattcatctaggagcgacgaagatgtatcaagatttaaagatgttgttttggcg 25308031  T
Q  120 gcctagaatgaagaaggacat--atgagtttgtgtatgcttgtttgtttttgtca-aagtctaacattgaaca 189  Q
    |||| || |||||||||| ||  ||||||||||| |||||||||||  ||||||| |||||||| ||||||||    
T  25308032 gcctggagtgaagaaggatataaatgagtttgtgcatgcttgtttg-atttgtcagaagtctaagattgaaca 25308103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 21936620 - 21936763
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  21936620 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcacccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 21936719  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  21936720 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 21936763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 23504366 - 23504235
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaaga 133  Q
    |||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  23504366 attttggacgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtatcaagatttgaagaggttgttttggtggcctggaatgaaga 23504267  T
Q  134 aggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||| ||   ||||||||| ||||||||||||    
T  23504266 aggagattgctgagtttgtttatgcttgtttg 23504235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 24582146 - 24582003
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  24582146 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 24582047  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||  |||||||||||| ||   ||||||||| ||||||||||||    
T  24582046 ctgtaatgaagaaggagattgctgagtttgtttatgcttgtttg 24582003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 27012020 - 27011877
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| | ||||||||   |||||| || |||||||||||||||||||| |||||||||||||||     
T  27012020 cttaagaggcaaattttggacgaaggtcatagaagtagttttagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggt 27011921  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  27011920 ctggaatgaagaaggagattactgagtttgtttatgcttgtttg 27011877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 21890245 - 21890289
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||    
T  21890245 ggagctacaaagatgtatcatgatttgaagaaattgttttggtgg 21890289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 8318 - 8203
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| | ||||||| ||||||||||   ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  8318 cttaagaggcagattttggacgaaggtcaaaggagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaggctgttttggtggc 8219  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  8218 ctggaatgaagaagga 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 22 - 194
Target Start/End: Complemental strand, 15095656 - 15095482
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| | ||   |  |||||| || ||||| |||||||| |||||||||||||||||||    
T  15095656 cttaagaagcggattttggaagaaggtcacatgagtagtctgagtttccatccaaaagcgacgaaaatgtaccaggatttaaagaggttgttttggtggc 15095557  T
Q  122 ctagaatgaagaaggacata--tgagtttgtgtatgcttgtttgtttttgtcaaagtctaacattgaacaccaaa 194  Q
    || ||||||||||||| |||   ||||||||||||||||||||| ||||   |||||| || |||||||| ||||    
T  15095556 ctggaatgaagaaggatatagcagagtttgtgtatgcttgtttggtttttcaaaagtcgaagattgaacatcaaa 15095482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 6711909 - 6712013
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaag 132  Q
    |||||||||||||||||||| ||||||| ||||||||||   | || | || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6711909 gattttggaagaaggtcacaggagtagtctgagtattcatccaagaacaactaagatgtatcaggatttgaagaggttgttttggtggcctggaatgaag 6712008  T
Q  133 aagga 137  Q
    |||||    
T  6712009 aagga 6712013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 13966829 - 13966972
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  13966829 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 13966928  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  13966929 ctggaatgaagaaggaaatcgctgagtttgtttatgcttgtttg 13966972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 16257795 - 16257652
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| || |||||| ||||||||||   |||||| || ||||||||||| |||||||| ||||||||||||||||    
T  16257795 cttaagaggcagattttggacgaaggtcatataagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaaaaggttgttttggtggc 16257696  T
Q  122 ctagaatgaagaaggacata--tgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| |    ||||||||| ||||||||||||    
T  16257695 ctggaatgaagaaggagaccgctgagtttgtttatgcttgtttg 16257652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 30138457 - 30138314
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  30138457 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 30138358  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  30138357 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 30138314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 30148008 - 30147865
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  30148008 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 30147909  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  30147908 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 30147865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 8273888 - 8274003
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  8273888 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 8273987  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  8273988 ctggaatgaagaagga 8274003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 16742192 - 16742335
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| |||||||| ||||||||||||||||    
T  16742192 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaaaaggttgttttggtggc 16742291  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
     | ||||||||||||| ||   ||||||||| ||||||||||||    
T  16742292 ttggaatgaagaaggagatcgctgagtttgtttatgcttgtttg 16742335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 6152341 - 6152455
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||| | ||||||| || |||||||   |||||  || |||||||||||||||||||||||||||||||||||||    
T  6152341 cttaagagacagattttggacgaaggtcataggagtagtttg-gtattcatccaggagaaactaagatgtatcaggatttgaagaggttgttttggtggc 6152439  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  6152440 ctggaatgaagaagga 6152455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 18749316 - 18749201
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||| |  |||||| ||||||||||   ||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  18749316 cttaagagacagattttggacgaaggtcatagaagtagtttgagtattcatctaggagtgactaagatgtatcaggatttgaagaggttgttttagtggc 18749217  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||| ||||||    
T  18749216 ctggaatgatgaagga 18749201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 15610754 - 15610612
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| |||||| |||||||||    
T  15610754 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttg-tttggtggc 15610656  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||| ||| ||||||||||||    
T  15610655 ctggaatgaagaaggagatcgctgagtctgtttatgcttgtttg 15610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 17193745 - 17193602
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| ||| ||| || ||||| | ||||||||||   ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  17193745 cttaagaggcaaattttggacgaaagtcgcaggagtaatctgagtattcatccaggagcgactaagatgtatcagaatttgaagaggttgttttggtggc 17193646  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
     | ||||||| ||||| ||    |||||||| ||||||||||||    
T  17193645 ttggaatgaacaaggaaattgcagagtttgtttatgcttgtttg 17193602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 18133836 - 18133922
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||||||||| |||||| ||||||  | ||||||||   |||||| |||||||||||||| |||||||||| | |||||||||||    
T  18133836 attttggaagaaagtcacaagagtagcttaagtattcatccaggagctacaaagatgtatcatgatttgaagaagctgttttggtgg 18133922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 10419534 - 10419638
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaag 132  Q
    |||||| |||||| |||| | ||||| | ||||||||||   |||||| || || |||||||| || ||||||| ||||||||||||| ||||| |||||    
T  10419534 gattttagaagaaagtcataagagtaatttgagtattcatccaggagctacgaaaatgtatcatgacttgaagaagttgttttggtggtctagattgaag 10419633  T
Q  133 aagga 137  Q
    |||||    
T  10419634 aagga 10419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 12792792 - 12792700
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttt 114  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| |||||||| || ||||||    
T  12792792 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaaaagattgttt 12792700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 15248734 - 15248690
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  15248734 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 15248690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 2e-32; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 15077761 - 15077933
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| | |||||||||| ||||||   |  |||||| ||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  15077761 cttaagaggtagattttggacgaaggtattagaagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaggttgttttggtggc 15077860  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttgtttttgtc-aaagtctaacattgaacacca 192  Q
    |||||||||||||||| ||   ||||||||| ||||||||||||  |||||| |||||| || |||||||||||    
T  15077861 ctagaatgaagaaggaaattgctgagtttgtatatgcttgtttg-gtttgtcaaaagtcgaagattgaacacca 15077933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 16098936 - 16098793
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| | ||||||| ||||||||||   ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  16098936 cttaagaggcagattttggacgaaggtcataggagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaagttgttttggtggc 16098837  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    |  ||||||||||||| ||    |||||||| ||||||||||||    
T  16098836 ccggaatgaagaaggaaattgcggagtttgtctatgcttgtttg 16098793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 16381768 - 16381911
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  16381768 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 16381867  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  16381868 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 16381911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 23027111 - 23027254
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| ||||||||||  |||||| | ||||||||   ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  23027111 cttaagagacagattttggacgaaggtcacacaagtagtttaagtattcatccaggagcgactaagatatatcaggatttgaagaggttgttttggtggc 23027210  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||    |||||||| ||||||||||||    
T  23027211 ctggaatgaagaaggagattgcagagtttgtttatgcttgtttg 23027254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 1648209 - 1648352
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   | |||| || |||||||||||||||||||| ||||||||||||||||    
T  1648209 cttaagaggcaaattttggatgaaggtcatagaagtagtttgagtattcatccaagagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 1648308  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  1648309 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 1648352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 18572529 - 18572394
Alignment:
Q  30 gcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatg 129  Q
    |||||||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||||||||||||||||||||||| ||||||| ||||     
T  18572529 gcagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaagaggttgtttttgtggcctggaatt 18572430  T
Q  130 aagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||||||| ||   ||||||||| ||||||||||||    
T  18572429 aagaaggagattactgagtttgtttatgcttgtttg 18572394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 18837311 - 18837446
Alignment:
Q  30 gcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatg 129  Q
    |||||||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||||||||| ||||| ||||||||||||||| |||||    
T  18837311 gcagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttaaagagattgttttggtggcctggaatg 18837410  T
Q  130 aagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||||||| ||   ||||||||| ||||||||||||    
T  18837411 aagaaggaaattgctgagtttgtttatgcttgtttg 18837446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 21928091 - 21927976
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  |||||||||||  | ||||||| ||||||| ||||||||||   ||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  21928091 cttaagagacagattttggataagggtcacaggagtagtctgagtattcatccaggagcgactaagatgtatgaggatttgaagaggtcgttttggtggc 21927992  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  21927991 ctggaatgaagaagga 21927976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 35275481 - 35275596
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||||| |||||| |||||||| |  |||||| |||||||||| | |||||| |  |||||||||||||||||||||||||||||||||||||    
T  35275481 cttaagaggcagactttggacgaaggtcaaagaagtagtctgagtattcattcaggagcaagtaagatgtatcaggatttgaagaggttgttttggtggc 35275580  T
Q  122 ctagaatgaagaagga 137  Q
    ||  ||||||||||||    
T  35275581 ctgaaatgaagaagga 35275596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 14624755 - 14624895
Alignment:
Q  25 aagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggccta 124  Q
    |||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||  ||     
T  14624755 aagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtgttctg 14624854  T
Q  125 gaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||||||| ||   ||||||||| ||||||||||||    
T  14624855 gaatgaagaaggagattgctgagtttgtttatgcttgtttg 14624895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 23997131 - 23996991
Alignment:
Q  25 aagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggccta 124  Q
    |||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| ||||| || ||||||||||||||||||     
T  23997131 aagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaagattttaaaaggttgttttggtggcctg 23997032  T
Q  125 gaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||||||| ||   ||||||||| ||||||||||||    
T  23997031 gaatgaagaaggagattgctgagtttgtttatgcttgtttg 23996991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 16233914 - 16233771
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||| | || |||||||   |||||| || ||||||||||| |||||||| ||||||||||||||||    
T  16233914 cttaagaggcaaattttggacgaaggtcatagaagtattttgtgtattcatccaggagcaactaagatgtatcaagatttgaaaaggttgttttggtggc 16233815  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||| ||| ||   ||||||||| ||||||||||||    
T  16233814 ctggaatgaagatggagatcgctgagtttgtttatgcttgtttg 16233771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 15896927 - 15896882
Alignment:
Q  75 aggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||    
T  15896927 aggagctacaaagatgtatcatgatttgaagaggttattttggtgg 15896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 15460211 - 15460107
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaag 132  Q
    |||||| |||||| |||| | ||| | | ||||||||||   |||||| || || |||||||| || ||||||| ||||||||||||| || || |||||    
T  15460211 gattttagaagaaagtcataagagcaatttgagtattcatccaggagctacgaaaatgtatcatgacttgaagaagttgttttggtggtctggattgaag 15460112  T
Q  133 aagga 137  Q
    |||||    
T  15460111 aagga 15460107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 10039 - 9896
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||| | |||||||| |  |||||| ||||||||||   ||||||||| | |||||||||||||||||||||||||||||||||||    
T  10039 cttaagaggcagattttgaacgaaggtcatagaagtagtttgagtattcatccaggagcgactacgatgtatcaggatttgaagaggttgttttggtggc 9940  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  9939 ctggaatgaagaaggaaattgctgagtttgtttatgcttgtttg 9896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 515 - 372
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| || |||||| ||||||||||   ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  515 cttaagaggcaaattttggacgaaggtcatataagtagtttgagtattcatctaggagcgactaagatgtatcaagatttgaagaggttgttttggtggc 416  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || |||||||||| || ||   ||||||||| ||||||||||||    
T  415 ctggaatgaagaatgatattgctgagtttgtttatgcttgtttg 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 13990 - 14133
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| | |||||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13990 cttaagaggtagattttggacgaaggtcatagaagtagtctgagtattcatccaggagcgactaagatgtatcaagatttgaagaggttgttttggtggc 14089  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||  | |||||||| ||||||||||||    
T  14090 ctggaatgaagaaggaaattgaagagtttgtttatgcttgtttg 14133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 9320 - 9463
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||||| |||||||||||||| ||| | ||||||| ||||||||||   |||||| ||||||||||||||||||||||||||||||||||  ||||    
T  9320 cttaagaagcggattttggaagaagatcataggagtagtctgagtattcatctaggagccacaaagatgtatcaggatttgaagaggttgttttaatggc 9419  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
     | ||||||||||||| ||  |  ||||||||||||||||||||    
T  9420 atggaatgaagaaggatatagaaaagtttgtgtatgcttgtttg 9463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 13961 - 13818
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13961 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtatcaagatttgaagaggttgttttggtggc 13862  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  13861 ctggaatgaagaaggaaattgctgagtttgtttatgcttgtttg 13818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 677 - 820
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| || ||||||||| |||||||| |  | |||| ||||||||||   |||||| || |||||||||||||||||||||||||||||||||||||    
T  677 cttaagaggcggattttggacgaaggtcatagaaatagtttgagtattcatccaggagcaactaagatgtatcaggatttgaagaggttgttttggtggc 776  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||||||||||||||| ||  |||| ||||| ||||||||||||    
T  777 ctagaatgaagaaggaaattgatgactttgtttatgcttgtttg 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 3198 - 3340
Alignment:
Q  23 ttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcc 122  Q
    |||||| || ||||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||||||||||||||||||||||||||||||    
T  3198 ttaagaggctgattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaacgaagatgtatcaggatttgaagaggttgttttggtggcc 3297  T
Q  123 tagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    | ||||||||||||| ||   ||||||||| ||||||||||||    
T  3298 tggaatgaagaaggagattgctgagtttgtttatgcttgtttg 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 75611 - 75442
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||||| ||||||||| ||||||||||  |||| ||||||||| |    ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  75611 cttaagaagcggattttggatgaaggtcacagaagtattatgagtatccctccaggagcgacaaagatgtatcatgatttgaagagattgttttggtggc 75512  T
Q  122 ctagaatgaagaaggacata--tgagtttgtgtatgcttgtttgtttttgtc-aaagtctaacattgaaca 189  Q
    || ||||||||||||| |||    ||||||| ||||||||||||  |||||| ||||||||| ||||||||    
T  75511 ctggaatgaagaaggatataacgaagtttgtatatgcttgtttg-ctttgtcaaaagtctaagattgaaca 75442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 3593 - 3452
Alignment:
Q  24 taagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcct 123  Q
    ||||| || ||||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3593 taagaggcggattttggacgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtatcaagatttgaagaggttgttttggtggcct 3494  T
Q  124 agaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
     ||||||||||||| ||   ||||||||| ||||||||||||    
T  3493 ggaatgaagaaggagattggtgagtttgtttatgcttgtttg 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 8145 - 8286
Alignment:
Q  24 taagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcct 123  Q
    ||||| |||||||||||| || ||||| |  |||| | ||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8145 taagaggcagattttggacgagggtcatagaagtattttgagtattcacctaggagcgactaagatgtatcaggatttgaagaggttgttttggtggcct 8244  T
Q  124 agaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||||||||  |   ||||||||| ||||||||||||    
T  8245 agaatgaagaaggaatttgctgagtttgtttatgcttgtttg 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 2e-29; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 12640021 - 12640138
Alignment:
Q  20 aacttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtg 119  Q
    ||||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||||||||||||||||||    
T  12640021 aacttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaacgaagatgtatcaggatttgaagaggttgttttggtg 12640120  T
Q  120 gcctagaatgaagaagga 137  Q
    |||| |||||||||||||    
T  12640121 gcctggaatgaagaagga 12640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 21905959 - 21906099
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||||  |||||||||||||||||||| ||||||| | ||||||||   ||||||||| ||||||||||||||||| |||||||||||||||| ||    
T  21905959 cttaagaagtggattttggaagaaggtcacaggagtagtcttagtattcatccaggagcgacgaagatgtatcaggatttaaagaggttgttttggtcgc 21906058  T
Q  122 ctagaatgaagaaggacata--tgagtttgtgtatgcttgt 160  Q
    || ||| ||||||||| |||  | | |||||||||||||||    
T  21906059 ctggaacgaagaaggatatagctcaatttgtgtatgcttgt 21906099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 22276931 - 22276788
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||  |  |||||| ||||||||||   |||||| || ||||||||||| |||||||||||||||||||||||||    
T  22276931 cttaagatgcagattttggacgaaggtcgtagaagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaagaggttgttttggtggc 22276832  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||| |||||||||||| ||   ||||||||| ||||||||||||    
T  22276831 ctaaaatgaagaaggagattgctgagtttgtttatgcttgtttg 22276788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 24569458 - 24569601
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| || ||||||||| || ||||| |  |||||| | ||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  24569458 cttaagaggcggattttggacgagggtcatagaagtagtttaagtattcatctaggagcgactaagatgtatcaggatttgaagaggttgttttggtggc 24569557  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  24569558 ctggaatgaagaaggaaattgctgagtttgtatatgcttgtttg 24569601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 22761359 - 22761474
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| ||||| || |  |||||| | ||||||||   ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  22761359 cttaagaggcagattttggacgaaggccatagaagtagtctaagtattcatccaggagcgactaagatgtatcaagatttgaagaggttgttttggtggc 22761458  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  22761459 ctggaatgaagaagga 22761474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 23816833 - 23816976
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| | |||||||||  |||||||| |  |||||| ||||||||||   ||||||||| |||||||||||| |||||||||||||||||| |||||    
T  23816833 cttaagaggtagattttgggcgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtatcagtatttgaagaggttgttttagtggc 23816932  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||    |||||||| ||||||||||||    
T  23816933 ctggaatgaagaaggaaattccagagtttgtttatgcttgtttg 23816976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 24830981 - 24831120
Alignment:
Q  25 aagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggccta 124  Q
    |||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||| ||||||| ||||||||||||||||||     
T  24830981 aagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcag-atttgaaaaggttgttttggtggcctg 24831079  T
Q  125 gaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||||||| ||   ||||||||| ||||||||||||    
T  24831080 gaatgaagaaggagattgctgagtttgtttatgcttgtttg 24831120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 25129236 - 25129157
Alignment:
Q  85 aagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||    |||||||| ||||||||||||    
T  25129236 aagatgtat-aggatttgaagaggttgttttggtggcctagaaggaagaaggagattgcagagtttgtttatgcttgtttg 25129157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 24819538 - 24819579
Alignment:
Q  84 aaagatgtatcaggatttgaagaggttgttttggtggcctag 125  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    
T  24819538 aaagatgtatcattatttgaagaggttgttttggtggtctag 24819579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 45530110 - 45530066
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| ||||| |||||||| |||||||||| |||||||||||||    
T  45530110 ggagctacaaaaatgtatcatgatttgaagaagttgttttggtgg 45530066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 3128 - 3271
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  3128 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 3227  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  3228 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 24447 - 24304
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  24447 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 24348  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  24347 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 24304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 19100 - 18957
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| | |||||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| |||||||||||||||||||||||||    
T  19100 cttaagaggaagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaagaggttgttttggtggc 19001  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  19000 ctggaatgaagaaggaaattgctgagtttgtttatgcttgtttg 18957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 15709 - 15566
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| || |||||||  |||||| | ||||||||   |||||| || |||||||||||||||||||||||||||||||||||||    
T  15709 cttaagaggcagattttggatgagggtcacagaagtagtttaagtattcatccaggagcaactaagatgtatcaggatttgaagaggttgttttggtggc 15610  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   | ||||||| ||||||||||||    
T  15609 ctggaatgaagaaggagattgtttagtttgtttatgcttgtttg 15566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 41311 - 41168
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  41311 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 41212  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  41211 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 41168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 9e-29; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 20830714 - 20830857
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  20830714 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 20830813  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  20830814 ctggaatgaagaaggagattgctgagtttgtttatgcttgtttg 20830857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 22134887 - 22134994
Alignment:
Q  30 gcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatg 129  Q
    |||||||||||| |||||||| |  |||||| ||||||||||   ||||| ||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  22134887 gcagattttggacgaaggtcatagaagtagtttgagtattcatccaggagtgactaagatgtatcaggatttgaagagcttgttttggtggcctggaatg 22134986  T
Q  130 aagaagga 137  Q
    ||||||||    
T  22134987 aagaagga 22134994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 21201664 - 21201728
Alignment:
Q  73 taaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaagga 137  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21201664 taagaagcgacgtagatgtatcaggatttgaaaaggttgttttggtggcctggaatgaagaagga 21201728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 20139813 - 20139769
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  20139813 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 20139769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 72242 - 72127
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||||| ||||||| ||||||||||   |||||| |  ||||||||||| |||||||||||||||||||||||||    
T  72242 cttaagagacagattttggacgaaggtcacaggagtagtctgagtattcatccaggagcaaataagatgtatcaagatttgaagaggttgttttggtggc 72143  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  72142 ctggaatgaagaagga 72127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 25015 - 24877
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| |  | |||| ||||||||||   |||||| || ||||||||||||||||||||||||||| ||||||| |    
T  25015 cttaagaggcagattttggacgaaggtcatagaactagtttgagtattcacccaggagctactaagatgtatcaggatttgaagaggttg-tttggtgac 24917  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttg 159  Q
    || ||||||||||||| ||  |||||||||| ||||||||    
T  24916 ctggaatgaagaaggaaattgatgagtttgtatatgcttg 24877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 32666 - 32781
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  |||||||| || |||||||| |  |||||| ||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32666 cttaagagacagattttagacgaaggtcataaaagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgaagaggttgttttggtggc 32765  T
Q  122 ctagaatgaagaagga 137  Q
    |  |||||| ||||||    
T  32766 caggaatgatgaagga 32781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 8221 - 8107
Alignment:
Q  23 ttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcc 122  Q
    |||||| |||||||||||| |||||||| |  || ||| ||| ||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8221 ttaagaggcagattttggacgaaggtcatagaagcagtttgactattcatccaggagcgactaagatgtatcaggatttgaagaggttgttttggtggcc 8122  T
Q  123 tagaatgaagaagga 137  Q
    | |||||||||||||    
T  8121 tggaatgaagaagga 8107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 27531 - 27662
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaaga 133  Q
    |||||||| |||||||| || |||||| ||||||||||   |||||| || ||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  27531 attttggacgaaggtcatataagtagtttgagtattcatccaggagcaactaagatgtatcaagatttgaagaggttgttttggtggcctgggatgaaga 27630  T
Q  134 aggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||| ||   ||||||||| ||||||||||||    
T  27631 aggagattgctgagtttgtttatgcttgtttg 27662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 26859 - 26744
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| |||||||||||||||||||||||||    
T  26859 cttaagaggcaaattttggatgaaggtcatagaagtagtttgagtattcatccaggagcaacgaagatgtatcatgatttgaagaggttgttttggtggc 26760  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  26759 ctggaatgaagaagga 26744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 7061 - 7176
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| ||| |||||||| |||||||| |  |||||| ||||||||||   |||||| || |||||||||||||||||||| ||||||||||||||||    
T  7061 cttaagaggcaaattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcaggatttgaaaaggttgttttggtggc 7160  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  7161 ctggaatgaagaagga 7176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 23229 - 23114
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| |||||||||||| |||||||| |  |||||| ||||||||||   ||||||||| ||||||||||||||||||| || |||||||| |||||    
T  23229 cttaagaggcagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtatcaggatttgatgaagttgttttagtggc 23130  T
Q  122 ctagaatgaagaagga 137  Q
    || |||||||||||||    
T  23129 ctggaatgaagaagga 23114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 9122 - 9257
Alignment:
Q  30 gcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatg 129  Q
    ||||||||| || ||||||||    |||||| ||||||||||   |||||| || ||||||||| ||||||||||||||||||||||||||||| |||||    
T  9122 gcagattttagacgaaggtcatcgaagtagtttgagtattcatccaggagcaactaagatgtattaggatttgaagaggttgttttggtggcctggaatg 9221  T
Q  130 aagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||||||| ||   ||||||||| ||||||||||||    
T  9222 aagaaggagattgctgagtttgtttatgcttgtttg 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 105838 - 105969
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaaga 133  Q
    |||||||| |||||||| |  |||||| | ||||||||   |||||| || |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  105838 attttggacgaaggtcatagaagtagtttaagtattcatccaggagcaacgaagatgtatcaggatttgaagaggttcttttggtggcctggaatgaaga 105937  T
Q  134 aggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||| ||   ||||||||| ||||||||||||    
T  105938 aggaaattgctgagtttgtatatgcttgtttg 105969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 4211 - 4071
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| || ||||||||| |||||||| |  |||||| ||||||||||   | ||||||| ||||||||||| ||||||||||| |||||||| ||||    
T  4211 cttaagaggcggattttggacgaaggtcatagaagtagtttgagtattcacccaagagcgactaagatgtatcatgatttgaagagattgttttgatggc 4112  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgt 160  Q
    || ||||||||||||| ||   ||||||||| |||||||||    
T  4111 ctggaatgaagaaggaaattgctgagtttgtatatgcttgt 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 6227 - 6085
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| | ||||||| || |||||||| |  |||||| ||||||| ||   |||||| || ||||||||||| |||||||||||||||||||||||||    
T  6227 cttaagaggaagattttagatgaaggtcatagaagtagtttgagtat-catccaggagcaactaagatgtatcaagatttgaagaggttgttttggtggc 6129  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  6128 ctggaatgaagaaggaaattgctgagtttgtttatgcttgtttg 6085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 53; Significance: 1e-21; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 180977 - 180834
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    ||||||| | |||||||||| |||||||| |  |||||| ||||||||||   |||||| || ||||||||||| ||||| || | ||||||||||||||    
T  180977 cttaagaggaagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcaactaagatgtatcatgattttaatatgttgttttggtggc 180878  T
Q  122 ctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    || ||||||||||||| ||   ||||||||| ||||||||||||    
T  180877 cttgaatgaagaaggagattgctgagtttgtttatgcttgtttg 180834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 25840 - 25884
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  25840 ggagctacgaagatgtatcacgatttgaagaagttgttttggtgg 25884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 149569 - 149525
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| | |||||||||||    
T  149569 ggagctacaaagatgtatcatgatttgaagaagctgttttggtgg 149525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 195011 - 195055
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| | |||||||||||    
T  195011 ggagctacaaagatgtatcacgatttgaagaagctgttttggtgg 195055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 24869 - 24790
Alignment:
Q  86 agatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| | ||   ||||||||||||||||||||||    
T  24869 agatgtatcaggatttgaagaggttgttttggtggcctggaatgaagaagtaaattgctgagtttgtgtatgcttgtttg 24790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 15129 - 15028
Alignment:
Q  22 cttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggc 121  Q
    |||||||  ||||||||||| |||||||| |  |||||| ||||||||||   ||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  15129 cttaagagacagattttggacgaaggtcatagaagtagtttgagtattcatccaggagcgactaagatgtaccaggatttgaagaggttgtttgggtggc 15030  T
Q  122 ct 123  Q
    ||    
T  15029 ct 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 47174 - 47064
Alignment:
Q  55 agtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaaggacat--atgagtttgtgt 152  Q
    |||||| ||||||||||    |||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||| ||   ||||||||| |    
T  47174 agtagtttgagtattcatcctggagcggctaagatgtatcaagatttgaagaggttgttttggtggcctggaatgaaggaggaaattgctgagtttgttt 47075  T
Q  153 atgcttgtttg 163  Q
    |||||||||||    
T  47074 atgcttgtttg 47064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 638 - 587
Alignment:
Q  86 agatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaagga 137  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  638 agatgtatcaggatttgaagaggttgttttggtggcctggaatgaagaagga 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 531 - 430
Alignment:
Q  31 cagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatga 130  Q
    ||||||||||| |||||||| |  |||||| ||||||||||   | ||| ||| | ||||||||||||||| ||||||||||||||||||||| ||||||    
T  531 cagattttggacgaaggtcatagaagtagtttgagtattcatccaagagtgactatgatgtatcaggatttaaagaggttgttttggtggcctggaatga 432  T
Q  131 ag 132  Q
    ||    
T  431 ag 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 380 - 450
Alignment:
Q  95 aggatttgaagaggttgttttggtggcctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||   ||||||||| ||||||||||||    
T  380 aggatttgaagaggttgttttggtggcctggaatgaagaaggaaattgctgagtttgtatatgcttgtttg 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 55216 - 55296
Alignment:
Q  85 aagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaaggacat--atgagtttgtgtatgcttgtttg 163  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| ||   ||||||| | ||||||||||||    
T  55216 aagatgtatcaagatttgaagaggttgttttggtggcctggaatgaagatggatattgctgagtttttttatgcttgtttg 55296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 25012 - 25070
Alignment:
Q  62 tgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||||||| || ||||| |||||||||||||| |||||||||| |||||||||||||    
T  25012 tgagtattcattagggagctacaaagatgtatcatgatttgaagaagttgttttggtgg 25070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 2619 - 2706
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||| |||||| |||||| ||||||  ||||||||||   |||||| || || |||||||| |||||||||| |||||||||||||    
T  2619 gattttagaagaaagtcacaagagtagcttgagtattcatccaggagctacgaaaatgtatcatgatttgaagaagttgttttggtgg 2706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 51169 - 51214
Alignment:
Q  75 aggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||    
T  51169 aggagctacaaagatgtatcatgatttgaagagattgttttggtgg 51214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 48298 - 48390
Alignment:
Q  33 gattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctag 125  Q
    ||||||||||||| | || | ||||||  | ||||||||   |||||| |||||||||||||| || ||||||| ||||||||||||| ||||    
T  48298 gattttggaagaaagccataggagtagcttaagtattcatctaggagctacaaagatgtatcatgacttgaagaagttgttttggtggtctag 48390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 2913 - 2869
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||    
T  2913 ggagctacaaagatgtatcatgatttgaagaagttgttttggtgg 2869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 46664 - 46750
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||| |||||| ||||||  ||||||||||   |||||| ||||| ||| |||| |||||||||| | |||||||||||    
T  46664 attttagaagaaagtcacaagagtagcttgagtattcatccaggagctacaaaaatgaatcatgatttgaagaagctgttttggtgg 46750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 14372 - 14430
Alignment:
Q  62 tgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||||||||  | ||||| || ||||||||||| |||||||||| |||||||||||||    
T  14372 tgagtattcatcagggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 14430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 3828 - 3746
Alignment:
Q  38 tggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    |||||||| |||||| ||||||  | ||||||||    ||||| |||||||||||||| || ||||||| |||||||||||||    
T  3828 tggaagaaagtcacaagagtagcttaagtattcatccgggagctacaaagatgtatcatgacttgaagaagttgttttggtgg 3746  T

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Target: scaffold0270 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 4870 - 4828
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggt 118  Q
    ||||| |||||||||||||| |||||||||| |||||||||||    
T  4870 ggagctacaaagatgtatcatgatttgaagaagttgttttggt 4828  T

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Target: scaffold0270; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 12000 - 11958
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggt 118  Q
    ||||| |||||||||||||| |||||||||| |||||||||||    
T  12000 ggagctacaaagatgtatcatgatttgaagaagttgttttggt 11958  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 19890 - 19804
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||| |||||| ||||||  |||||||||| |  ||||| || ||||||||||| |||||||| | |||||||||||||    
T  19890 attttagaggaaagtcacaagagtagcttgagtattcattcgggagctacgaagatgtatcatgatttgaaaaagttgttttggtgg 19804  T

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Target: scaffold0090; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 24052 - 23966
Alignment:
Q  34 attttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||| |||||| ||||||  |||||||||| |  ||||| || ||||||||||| |||||||| | |||||||||||||    
T  24052 attttagaggaaagtcacaagagtagcttgagtattcattcgggagctacgaagatgtatcatgatttgaaaaagttgttttggtgg 23966  T

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Target: scaffold0682 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 882 - 821
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtggcctagaatgaagaagga 137  Q
    ||||| || ||||||||||| |||||||||| ||||||||||||| || |  ||||||||||    
T  882 ggagctacgaagatgtatcatgatttgaagaagttgttttggtggtctggtttgaagaagga 821  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 4192 - 4095
Alignment:
Q  23 ttaagaagcagattttggaagaaggtcacatgagtagtatgagtattcaataaggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||||||  ||||||||||||  |||| |  |||||  |||||||||| |  ||| | || ||||||||||| |||||||||| |||||||||||||    
T  4192 ttaagaagatgattttggaagagagtcatagaagtagcttgagtattcatttgggatctaccaagatgtatcacgatttgaagaagttgttttggtgg 4095  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 11512 - 11553
Alignment:
Q  84 aaagatgtatcaggatttgaagaggttgttttggtggcctag 125  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    
T  11512 aaagatgtatcattatttgaagaggttgttttggtggtctag 11553  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 17704 - 17745
Alignment:
Q  84 aaagatgtatcaggatttgaagaggttgttttggtggcctag 125  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    
T  17704 aaagatgtatcattatttgaagaggttgttttggtggtctag 17745  T

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Target: scaffold0342 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 18522 - 18566
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  18522 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 18566  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 17284 - 17328
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  17284 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 17328  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 17844 - 17888
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| ||||| |||||||| |||||||||| |||||||||||||    
T  17844 ggagctacaaaaatgtatcatgatttgaagatgttgttttggtgg 17888  T

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Target: scaffold0228 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 695 - 651
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  695 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 651  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 41916 - 41872
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| | |||||||||||    
T  41916 ggagctacaaagatgtatcatgatttgaagaagctgttttggtgg 41872  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 15876 - 15832
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  15876 ggagctactaagatgtatcatgatttgaagaagttgttttggtgg 15832  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 100859 - 100903
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| |||||||||||||| |||||||||| | |||||||||||    
T  100859 ggagctacaaagatgtatcatgatttgaagaagctgttttggtgg 100903  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 218724 - 218768
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| || ||||||||||| |||||||||| |||||||||||||    
T  218724 ggagctacgaagatgtatcatgatttgaagaagttgttttggtgg 218768  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 89752 - 89796
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| ||||| |||||||| |||||||||| |||||||||||||    
T  89752 ggagctacaaaaatgtatcatgatttgaagaagttgttttggtgg 89796  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 90430 - 90474
Alignment:
Q  76 ggagcgacaaagatgtatcaggatttgaagaggttgttttggtgg 120  Q
    ||||| ||||| |||||||| |||||||||| |||||||||||||    
T  90430 ggagctacaaaaatgtatcatgatttgaagaagttgttttggtgg 90474  T

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