View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_6 (Length: 512)

Name: NF9839A_low_6
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_6
NF9839A_low_6
[»] chr8 (31 HSPs)
chr8 (37-488)||(17656943-17657400)
chr8 (36-302)||(10248493-10248763)
chr8 (94-315)||(24995393-24995619)
chr8 (94-314)||(9519357-9519582)
chr8 (94-314)||(32066293-32066518)
chr8 (94-314)||(34389003-34389228)
chr8 (93-314)||(36630695-36630921)
chr8 (94-314)||(37986856-37987081)
chr8 (87-215)||(30236119-30236251)
chr8 (117-284)||(15821400-15821570)
chr8 (98-221)||(31207364-31207490)
chr8 (96-279)||(15906580-15906767)
chr8 (37-192)||(35062442-35062597)
chr8 (91-192)||(10552254-10552354)
chr8 (92-190)||(32945699-32945797)
chr8 (96-302)||(17720706-17720914)
chr8 (92-189)||(12198065-12198162)
chr8 (92-189)||(12442493-12442590)
chr8 (94-166)||(41893399-41893470)
chr8 (94-157)||(16457459-16457522)
chr8 (92-160)||(41791260-41791328)
chr8 (128-167)||(40531242-40531281)
chr8 (122-192)||(12898300-12898370)
chr8 (117-155)||(20138448-20138486)
chr8 (128-166)||(33967337-33967375)
chr8 (223-301)||(31210321-31210400)
chr8 (106-152)||(3679471-3679517)
chr8 (108-214)||(18690391-18690501)
chr8 (122-167)||(23264716-23264761)
chr8 (129-162)||(36796621-36796654)
chr8 (93-146)||(38577787-38577840)
[»] chr6 (24 HSPs)
chr6 (2-512)||(20701710-20702223)
chr6 (2-421)||(3880505-3880912)
chr6 (37-300)||(32935280-32935547)
chr6 (118-282)||(16510323-16510492)
chr6 (37-306)||(9223909-9224182)
chr6 (94-300)||(3117364-3117576)
chr6 (92-306)||(26534712-26534931)
chr6 (94-306)||(21265983-21266196)
chr6 (92-190)||(26216015-26216112)
chr6 (36-161)||(13423482-13423607)
chr6 (94-284)||(21264878-21265069)
chr6 (92-192)||(12794099-12794200)
chr6 (158-300)||(15132585-15132730)
chr6 (99-215)||(33968615-33968736)
chr6 (36-123)||(15120537-15120624)
chr6 (122-180)||(34105410-34105468)
chr6 (122-166)||(34090374-34090418)
chr6 (81-176)||(15944020-15944116)
chr6 (106-166)||(34092806-34092866)
chr6 (131-166)||(7546464-7546499)
chr6 (387-512)||(16510587-16510711)
chr6 (107-152)||(32316393-32316438)
chr6 (387-447)||(3117220-3117280)
chr6 (130-166)||(12129228-12129264)
[»] chr7 (41 HSPs)
chr7 (37-503)||(8744824-8745293)
chr7 (140-320)||(44755480-44755663)
chr7 (2-306)||(6716643-6716950)
chr7 (37-488)||(42533194-42533648)
chr7 (2-351)||(1320619-1320969)
chr7 (22-251)||(24324723-24324957)
chr7 (83-413)||(16954414-16954748)
chr7 (94-300)||(38306133-38306344)
chr7 (2-109)||(44755657-44755764)
chr7 (94-314)||(3419654-3419879)
chr7 (85-342)||(16828924-16829184)
chr7 (94-300)||(47325883-47326094)
chr7 (37-282)||(3478243-3478492)
chr7 (94-316)||(10244039-10244265)
chr7 (93-314)||(3866975-3867200)
chr7 (92-284)||(12480777-12480971)
chr7 (93-192)||(6584894-6584993)
chr7 (93-285)||(35745824-35746019)
chr7 (93-282)||(34389853-34390046)
chr7 (108-300)||(33434982-33435178)
chr7 (125-300)||(25160687-25160867)
chr7 (93-262)||(41089745-41089919)
chr7 (94-314)||(5860286-5860511)
chr7 (92-283)||(11379122-11379318)
chr7 (94-300)||(37794872-37795072)
chr7 (108-192)||(13311824-13311908)
chr7 (94-169)||(9349757-9349832)
chr7 (87-189)||(46133268-46133371)
chr7 (92-192)||(38485541-38485640)
chr7 (77-192)||(47457003-47457118)
chr7 (92-185)||(23983187-23983280)
chr7 (93-167)||(48058651-48058725)
chr7 (96-177)||(9428105-9428186)
chr7 (37-192)||(36449069-36449224)
chr7 (128-166)||(46262151-46262189)
chr7 (131-165)||(17802851-17802885)
chr7 (128-166)||(27993568-27993606)
chr7 (128-166)||(35206725-35206763)
chr7 (117-155)||(44353585-44353623)
chr7 (78-192)||(22568093-22568208)
chr7 (132-166)||(25153231-25153265)
[»] chr5 (26 HSPs)
chr5 (2-505)||(26045871-26046376)
chr5 (36-512)||(13954174-13954651)
chr5 (37-421)||(14302371-14302758)
chr5 (34-310)||(7195178-7195457)
chr5 (37-310)||(8297331-8297608)
chr5 (38-278)||(7391979-7392217)
chr5 (41-260)||(33258827-33259050)
chr5 (94-298)||(34377972-34378181)
chr5 (94-314)||(698219-698444)
chr5 (95-300)||(18593115-18593325)
chr5 (37-244)||(25991936-25992147)
chr5 (93-285)||(29087368-29087565)
chr5 (36-162)||(21402777-21402903)
chr5 (108-283)||(24072278-24072457)
chr5 (35-192)||(39184124-39184283)
chr5 (94-170)||(22675322-22675398)
chr5 (93-188)||(27713058-27713153)
chr5 (98-191)||(39024452-39024545)
chr5 (96-182)||(23426339-23426425)
chr5 (98-192)||(31721662-31721756)
chr5 (92-192)||(8730902-8731003)
chr5 (95-270)||(17854066-17854246)
chr5 (124-167)||(12046265-12046308)
chr5 (222-306)||(22675443-22675527)
chr5 (77-160)||(25658132-25658217)
chr5 (134-166)||(25341709-25341741)
[»] chr3 (37 HSPs)
chr3 (8-512)||(25647343-25647854)
chr3 (37-488)||(37123076-37123521)
chr3 (78-512)||(14193598-14194041)
chr3 (37-373)||(14755205-14755543)
chr3 (37-191)||(14879421-14879576)
chr3 (93-306)||(19176369-19176586)
chr3 (93-300)||(23328347-23328555)
chr3 (94-315)||(20611640-20611866)
chr3 (36-284)||(823374-823627)
chr3 (39-167)||(33143891-33144020)
chr3 (157-353)||(4463997-4464196)
chr3 (125-298)||(34475783-34475961)
chr3 (94-314)||(2392504-2392729)
chr3 (22-285)||(40023496-40023764)
chr3 (77-192)||(47945691-47945806)
chr3 (117-314)||(2394274-2394476)
chr3 (92-185)||(1652882-1652975)
chr3 (36-162)||(39021217-39021342)
chr3 (93-192)||(5556555-5556655)
chr3 (37-275)||(27398856-27399099)
chr3 (93-178)||(43012374-43012459)
chr3 (94-166)||(17550968-17551040)
chr3 (93-191)||(9584050-9584148)
chr3 (92-214)||(30935386-30935512)
chr3 (93-192)||(45398781-45398880)
chr3 (92-192)||(25594516-25594616)
chr3 (94-314)||(45163707-45163938)
chr3 (196-299)||(47235589-47235693)
chr3 (128-167)||(20710740-20710779)
chr3 (116-166)||(24099347-24099397)
chr3 (120-166)||(30127273-30127319)
chr3 (129-192)||(31482869-31482932)
chr3 (41-103)||(28937659-28937721)
chr3 (117-166)||(31424247-31424296)
chr3 (387-457)||(34476047-34476117)
chr3 (117-166)||(2782090-2782139)
chr3 (122-166)||(19295891-19295935)
[»] chr4 (46 HSPs)
chr4 (37-306)||(25753039-25753312)
chr4 (36-284)||(53823361-53823613)
chr4 (2-414)||(22811067-22811481)
chr4 (41-269)||(39420958-39421190)
chr4 (98-314)||(30964299-30964520)
chr4 (37-192)||(2061679-2061834)
chr4 (94-314)||(8254885-8255110)
chr4 (94-314)||(8268303-8268528)
chr4 (93-285)||(31050659-31050854)
chr4 (2-222)||(48098284-48098507)
chr4 (107-285)||(19815235-19815417)
chr4 (94-300)||(4305597-4305808)
chr4 (34-283)||(19672991-19673243)
chr4 (80-223)||(49747478-49747624)
chr4 (37-166)||(38637174-38637302)
chr4 (37-166)||(41117908-41118037)
chr4 (92-284)||(16501622-16501816)
chr4 (76-283)||(46698764-46698976)
chr4 (77-192)||(38929812-38929927)
chr4 (93-285)||(2825672-2825867)
chr4 (92-192)||(12296160-12296260)
chr4 (92-190)||(35800476-35800574)
chr4 (2-153)||(16832928-16833078)
chr4 (87-280)||(6599936-6600134)
chr4 (93-174)||(28966870-28966951)
chr4 (104-192)||(19311351-19311437)
chr4 (119-186)||(21387227-21387294)
chr4 (209-310)||(38639525-38639627)
chr4 (96-217)||(24740103-24740226)
chr4 (122-166)||(39041300-39041344)
chr4 (108-261)||(30167576-30167733)
chr4 (37-104)||(49528145-49528212)
chr4 (128-166)||(40813813-40813851)
chr4 (102-166)||(36962622-36962685)
chr4 (131-167)||(53756766-53756802)
chr4 (133-166)||(37707392-37707425)
chr4 (122-166)||(2792300-2792344)
chr4 (21-61)||(19311299-19311339)
chr4 (122-162)||(26474851-26474891)
chr4 (128-166)||(10388572-10388610)
chr4 (236-306)||(21988063-21988133)
chr4 (127-164)||(12296061-12296098)
chr4 (236-300)||(12296048-12296112)
chr4 (128-160)||(17416541-17416573)
chr4 (254-306)||(38929701-38929753)
chr4 (92-159)||(43076996-43077066)
[»] scaffold0200 (1 HSPs)
scaffold0200 (36-348)||(19209-19524)
[»] scaffold0050 (1 HSPs)
scaffold0050 (22-512)||(36364-36864)
[»] chr2 (43 HSPs)
chr2 (21-512)||(41086722-41087206)
chr2 (37-512)||(37770583-37771063)
chr2 (36-512)||(1269143-1269624)
chr2 (2-353)||(10173484-10173839)
chr2 (94-314)||(39338863-39339088)
chr2 (37-269)||(13337178-13337414)
chr2 (27-300)||(14106451-14106732)
chr2 (93-300)||(7874165-7874375)
chr2 (37-180)||(34230198-34230341)
chr2 (39-284)||(22885076-22885324)
chr2 (125-300)||(10523969-10524149)
chr2 (119-300)||(17105284-17105470)
chr2 (93-180)||(14405195-14405282)
chr2 (94-284)||(4471813-4472006)
chr2 (95-174)||(16959985-16960064)
chr2 (2-300)||(16952289-16952590)
chr2 (2-300)||(17022954-17023255)
chr2 (2-300)||(17060260-17060561)
chr2 (37-155)||(7695985-7696102)
chr2 (77-174)||(15126391-15126488)
chr2 (37-165)||(2062901-2063029)
chr2 (93-192)||(387158-387257)
chr2 (93-188)||(18681054-18681149)
chr2 (39-172)||(33788575-33788708)
chr2 (134-270)||(14566350-14566489)
chr2 (77-300)||(17079043-17079270)
chr2 (92-192)||(25504904-25505005)
chr2 (95-192)||(31902413-31902510)
chr2 (39-192)||(27739960-27740113)
chr2 (101-281)||(29487024-29487206)
chr2 (93-170)||(5254263-5254340)
chr2 (108-284)||(15710596-15710776)
chr2 (118-178)||(23650384-23650444)
chr2 (128-166)||(4162052-4162090)
chr2 (236-306)||(3745227-3745297)
chr2 (92-155)||(3745356-3745420)
chr2 (128-168)||(9560820-9560860)
chr2 (131-166)||(23665439-23665474)
chr2 (106-156)||(27880139-27880189)
chr2 (91-167)||(915447-915523)
chr2 (125-166)||(36276200-36276241)
chr2 (236-284)||(2062797-2062845)
chr2 (122-166)||(34143079-34143123)
[»] scaffold0119 (1 HSPs)
scaffold0119 (36-512)||(42078-42559)
[»] scaffold0063 (2 HSPs)
scaffold0063 (22-310)||(57990-58282)
scaffold0063 (387-485)||(57882-57980)
[»] chr1 (39 HSPs)
chr1 (37-265)||(27102098-27102331)
chr1 (94-314)||(41920311-41920535)
chr1 (116-270)||(9313309-9313467)
chr1 (94-284)||(31585758-31585953)
chr1 (94-312)||(24658791-24659012)
chr1 (37-192)||(6583157-6583312)
chr1 (41-278)||(34774767-34775007)
chr1 (94-300)||(5389419-5389630)
chr1 (52-310)||(32864517-32864781)
chr1 (94-314)||(30685902-30686127)
chr1 (93-282)||(46814464-46814656)
chr1 (125-300)||(7857527-7857705)
chr1 (94-300)||(46692817-46693028)
chr1 (37-346)||(16147384-16147698)
chr1 (92-193)||(17033570-17033672)
chr1 (93-314)||(24684475-24684699)
chr1 (107-283)||(38544749-38544928)
chr1 (117-282)||(24449951-24450121)
chr1 (236-414)||(6583335-6583511)
chr1 (77-192)||(19598621-19598736)
chr1 (108-248)||(27031852-27031995)
chr1 (118-300)||(20113543-20113730)
chr1 (92-214)||(4651739-4651864)
chr1 (95-300)||(50589206-50589413)
chr1 (41-161)||(10785405-10785524)
chr1 (37-192)||(42374148-42374304)
chr1 (94-192)||(5459146-5459244)
chr1 (249-494)||(10785489-10785729)
chr1 (122-179)||(15840938-15840995)
chr1 (98-188)||(46603381-46603472)
chr1 (2-104)||(31290926-31291027)
chr1 (96-169)||(27905420-27905493)
chr1 (122-166)||(30655571-30655615)
chr1 (96-154)||(9081506-9081563)
chr1 (387-481)||(7857344-7857438)
chr1 (128-166)||(38564912-38564950)
chr1 (123-164)||(42374049-42374090)
chr1 (2-86)||(16577352-16577435)
chr1 (122-166)||(33034672-33034716)
[»] scaffold1613 (1 HSPs)
scaffold1613 (107-283)||(1028-1207)
[»] scaffold0068 (1 HSPs)
scaffold0068 (94-314)||(35770-35995)
[»] scaffold0620 (2 HSPs)
scaffold0620 (122-166)||(3841-3885)
scaffold0620 (106-166)||(8140-8200)
[»] scaffold0062 (2 HSPs)
scaffold0062 (108-284)||(59508-59688)
scaffold0062 (108-214)||(47052-47162)
[»] scaffold0499 (1 HSPs)
scaffold0499 (77-282)||(6457-6658)


Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 37 - 488
Target Start/End: Original strand, 17656943 - 17657400
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  17656943 aaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatc 17657042  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca---cggtacaccagagaaacaccaaatcacgtcaaacaaaa 233  Q
    |||||||||||||||||| ||||||| |||||||| |||| | ||||||||||||| ||   ||||||| |||||||||||||||||||| |||| || |    
T  17657043 tcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccctcatcccggtacatcagagaaacaccaaatcacgccaaataaga 17657142  T
Q  234 tagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaa--aacgactcgatatacggt 331  Q
    | | |||||| ||||||||||||||||| |||||||||||||||||||| ||  ||||| ||||||||||||||||| ||  | ||||  ||||||||||    
T  17657143 ttgtagctagccaccgactcccgatctcgaagcaaaattaaccggcccatcggaaaccaacacacaaaaagtatgacaaacgatcgacatgatatacggt 17657242  T
Q  332 agtgcaaacaacaaacagatcataag-aaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatca 430  Q
     | ||| |||||||| |||||| ||| ||||  |||| |||||| ||| |||||  |||||||| || ||||||||||||||   ||||||   ||| ||    
T  17657243 ggagcacacaacaaatagatcaaaagaaaaactctcagttcaacgggatccgcttcctccaaacaccataaacaccttaacagtcccaaaaatgcaaaca 17657342  T
Q  431 acagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatca 488  Q
    | |||| ||||| || | ||||||||| ||||||| ||| ||||||||||| ||||||    
T  17657343 agagctagtgacaacaaacaaggacccgaataacagaggcagcctccaaaacaaatca 17657400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 36 - 302
Target Start/End: Original strand, 10248493 - 10248763
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||| ||||||||||||||||  || |||| |||  ||| |||||||||||| |||||  |||| ||||||||| ||||||||||||||||||||    
T  10248493 aaaagatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaaaccatataaagcaaaaaaccaaacttgagccaaagaactgactcccgat 10248592  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    || ||||||||||||||||| |||||| | |||||||| |||| |||||| |||||    ||| |||||||||||||||||||||||||| | |||||||    
T  10248593 cttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccctcacccccggtacaccagagaaacaccaaatcaagccaaacaa 10248692  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaa 302  Q
    ||| |||||||||||||||||||||||||| |||||||| |||| |||||||||  ||||| |||||||||    
T  10248693 aattgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaaaa 10248763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 94 - 315
Target Start/End: Original strand, 24995393 - 24995619
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc- 192  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || | | ||||||     
T  24995393 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccct 24995492  T
Q  193 ---ccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
       || | |||||||||||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||| |||| |||| |||||||||||||  |    
T  24995493 cgcccccagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaa 24995592  T
Q  289 accagcacacaaaaagtatgacgaaaa 315  Q
    |||||||||||| | ||| ||||||||    
T  24995593 accagcacacaatatgtaagacgaaaa 24995619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 9519582 - 9519357
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| || |||||||||      
T  9519582 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccct 9519483  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||| |||| |||| |||||||| || |  |    
T  9519482 cacccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaa 9519383  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  9519382 accagcacacaatatgtaagacgaaa 9519357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 32066293 - 32066518
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||| ||  |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| || |||||||||      
T  32066293 aaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccct 32066392  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||| ||||||| ||||||||| |||||||||| || ||| |||||| |||| ||||||||||||||| |||| |||||||||||||  |    
T  32066393 cgcccccggtacactagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccgaaa 32066492  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  32066493 accagcacacaatatgtaagacgaaa 32066518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 34389003 - 34389228
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||      
T  34389003 aaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccct 34389102  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaac-aaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      |||  ||||||||||||||| ||||||||| ||||||| ||||| |||||||||| ||||||||||||||| |||| |||| |||||||| | ||  |    
T  34389103 cgcccctggtacaccagagaaaaaccaaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaa 34389202  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  34389203 accagcacacaatatgtaagacgaaa 34389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 93 - 314
Target Start/End: Complemental strand, 36630921 - 36630695
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| |||||| ||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| || |||||||||     
T  36630921 aaaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccc 36630822  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgct 287  Q
       ||| |||||||||| ||||| ||||||||| |||||||||| || ||||||||||  || ||||||||||| |||| |||| |||||||| ||||      
T  36630821 tcgcccccggtacaccaaagaaaaaccaaatcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaa 36630722  T
Q  288 aaccagcacacaaaaagtatgacgaaa 314  Q
    ||||| ||||||| | ||| |||||||    
T  36630721 aaccaacacacaatatgtaagacgaaa 36630695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 37986856 - 37987081
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||| ||||| | |||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||  ||||||| || |||||||||      
T  37986856 aaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccct 37986955  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| |||||| ||| |  ||| |||||| |||||| |||||||| |||| |||| |||||||||||||  |    
T  37986956 cgcccccggtacaccagagaaaaaccaaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaa 37987055  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  37987056 accagcacacaatatgtaagacgaaa 37987081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 30236119 - 30236251
Alignment:
Q  87 accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 186  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |  |||||||||||||||    
T  30236119 accaaaaaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaaggg 30236218  T
Q  187 caccc----cccacggtacaccagagaaacacc 215  Q
    |||||    ||| |||| |||||||||||||||    
T  30236219 caccccttacccccggtccaccagagaaacacc 30236251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 117 - 284
Target Start/End: Original strand, 15821400 - 15821570
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaac 212  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    ||| ||||||||||||| |||    
T  15821400 caaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccctcggtacaccagag-aac 15821498  T
Q  213 accaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    |||| |||| | ||||||  || | |||||| |||| ||| |||||||||||| |||| ||| |||||||||    
T  15821499 accatatcaagccaaacaggattgtagctaggcaccaacttccgatctcaaagaaaaaataatcggcccacc 15821570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 31207364 - 31207490
Alignment:
Q  98 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc---ccc 194  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||   |||    
T  31207364 cccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcaccctcgccc 31207463  T
Q  195 acggtacaccagagaaacaccaaatca 221  Q
      ||||||||||||||| |||||||||    
T  31207464 ctggtacaccagagaaaaaccaaatca 31207490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 96 - 279
Target Start/End: Complemental strand, 15906767 - 15906580
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc---- 191  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || | ||||||||        
T  15906767 agcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggaccaaaccaaacgggcacccttaa 15906668  T
Q  192 cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggc 279  Q
    ||| | || |||| ||||||||||| | | || |  |||| | ||||| |||||||| |||||||||||| || ||||| | ||||||    
T  15906667 cccccagtccacccgagaaacaccatagcccgccggacaagaaagcagttagacaccaactcccgatctcgaaacaaaagttaccggc 15906580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 35062597 - 35062442
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    |||||||||||| |||||||||||   |  ||||||||  |||||| |||  | |||||||||||||| |||||| || | | ||||||||||| |||||    
T  35062597 aaagatcattcaccttccaccaccgcgcaacctctgatccaccgaaggaacacctaaaaagcccaaaaccaaactagaacaagagaactgactctcgatc 35062498  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||||||||||  |||||||||||||||||| || |||||||||||  ||||||||    
T  35062497 tcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagagaggcacccc 35062442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 10552354 - 10552254
Alignment:
Q  91 taaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    |||||||| ||||| |||||| || ||| |||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||| ||||||||    
T  10552354 taaaaagcacaaaaccaaactagaaccagagaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcacc 10552256  T
Q  191 cc 192  Q
    ||    
T  10552255 cc 10552254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 32945699 - 32945797
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||| |||||| | |||| || | ||||||||||| |||||    
T  32945699 aaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccactatacttcagaatcaaatcagaagagcacc 32945797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 302
Target Start/End: Original strand, 17720706 - 17720914
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc---- 191  Q
    ||||||||| | || |||| ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||| ||||  |||||||        
T  17720706 agcccaaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaaccagacaggcacccctta 17720804  T
Q  192 cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaacc 291  Q
    |||  ||| |||||||| |||||  |  || | ||||||| |  ||||||| || || |||| |||||||||||||||| ||| |||||||||   | ||    
T  17720805 cccctggtccaccagaggaacacggagcca-gccaaacaagaatgcagctatacgccaactctcgatctcaaagcaaaagtaatcggcccaccagaatcc 17720903  T
Q  292 agcacacaaaa 302  Q
    |||||||||||    
T  17720904 agcacacaaaa 17720914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 12198065 - 12198162
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 189  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||| ||||||||||| | |||||||| ||||| ||||    
T  12198065 aaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcac 12198162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 12442493 - 12442590
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 189  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||| ||||||||||| | |||||||| ||||| ||||    
T  12442493 aaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcac 12442590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 41893399 - 41893470
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  41893399 aaagcccaaaaacaa-cttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagact 41893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 16457459 - 16457522
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcc 157  Q
    |||||| |||| | |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16457459 aaagcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcc 16457522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 41791260 - 41791328
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccac 160  Q
    |||||| ||||||  |||||||| |||||||| |||||| ||||||||||||||||| ||||| |||||    
T  41791260 aaaaagtccaaaactaaacttgaaccaaagaagtgactctcgatctcgaatcaaaagcgatcgacccac 41791328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 40531281 - 40531242
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagactt 40531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 12898300 - 12898370
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||||||||| |||||||||||||||||||||||  ||||||||| ||  ||||||| |  ||||||||||    
T  12898300 aactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccc 12898370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 20138486 - 20138448
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcgg 155  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  20138486 caaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 33967375 - 33967337
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33967375 ctcctgatctcgaatcaaaagtgatcggcccaccagact 33967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 31210321 - 31210400
Alignment:
Q  223 gtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaa 301  Q
    |||||||||| || |||||||||| | ||||||||||||  |||| |||| |||||||||||||  ||||||| ||||||    
T  31210321 gtcaaacaaagattgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaa 31210400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 3679517 - 3679471
Alignment:
Q  106 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgat 152  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||    
T  3679517 caaacttgaatcaaagcaccgactcccgatctcgaatcaaaagtgat 3679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 18690501 - 18690391
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacac 203  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| |  ||  | ||||||||||||||||| ||    |||| |||    
T  18690501 aacttgaactaaagaactgattgacgatctcgaatcaaaagtgattggttcaccagacatctgggtctaatcagaagggcacccctcacctccggttcac 18690402  T
Q  204 cagagaaacac 214  Q
    |||||||||||    
T  18690401 cagagaaacac 18690391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 23264761 - 23264716
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    |||||||||||||||||||||||||| |||| || ||| |||||||    
T  23264761 aactgactcccgatctcgaatcaaaattgataggtccatcagactt 23264716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 36796654 - 36796621
Alignment:
Q  129 tcccgatctcgaatcaaaagtgatcggcccacca 162  Q
    ||||||||||||||||||||||||||||| ||||    
T  36796654 tcccgatctcgaatcaaaagtgatcggccaacca 36796621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 38577787 - 38577840
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaa 146  Q
    ||||| |||||| | ||||| | |||||||||| ||||||||||||||||||||    
T  38577787 aaaagtccaaaaaccaacttaaaccaaagaactaactcccgatctcgaatcaaa 38577840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 2 - 512
Target Start/End: Original strand, 20701710 - 20702223
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    |||||||||||||| | ||||||  ||| || || |||||||||||||||||||| |||| ||| |||| |||  |||||||||||||||||||||||||    
T  20701710 caaagttgagccacattcgaaaag-ctcctatccgaaagatcattcagcttccactacctctcgacctccgatccaccgaaagaaaccataaaaagccca 20701808  T
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacg 197  Q
    ||| ||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||| ||  | |||||||||||||||||||||    ||| ||    
T  20701809 aaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccctcacccccg 20701908  T
Q  198 gtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcaca 297  Q
    |||||||||||||| ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||| ||  ||||| ||||    
T  20701909 gtacaccagagaaaaaccaaatcacgccaaacaaatttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaaccatcaca 20702008  T
Q  298 caaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagatcataagaaaatact-catttcaacaggacccgctgactccaaactc 396  Q
    ||||||||| |||  |||| ||  ||||  |||||||||||||||||||||||||| | | ||| | | |   ||||| |||||||||  |||||||| |    
T  20702009 caaaaagtaggac--aaacaacaagatacgcggtagtgcaaacaacaaacagatcaaacggaaaaagtaccgctcaacgggacccgcttcctccaaacac 20702106  T
Q  397 cctaaacaccttaacaactccaaaa---gcacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatcccc 493  Q
    |||||||||||||||||  ||||||   ||| |  ||| | || |||||||||| ||||||||| | |||||||||   |||||||||||||||| ||||    
T  20702107 cctaaacaccttaacaatcccaaaaaatgcata--caagaactagtgacgacgaacaaggacccgagtaacaaaggctacctccaaaagaaatcaccccc 20702204  T
Q  494 acgaaacacccgtctcctc 512  Q
    |  ||||||||| ||||||    
T  20702205 aacaaacacccgcctcctc 20702223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 2 - 421
Target Start/End: Original strand, 3880505 - 3880912
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    ||||| |||||||| ||| ||||| ||| || || |||||| ||||| |||||||||||  ||| |||| |||  || ||||||||||||||||| | ||    
T  3880505 caaagctgagccacatcc-aaaaagctcatatccgaaagattattcaacttccaccaccactcgacctccgatccacggaaagaaaccataaaaatctca 3880603  T
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----g 197  Q
    ||| |||||||||||||||               ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||    |    
T  3880604 aaaccaaacttgatccaaa---------------ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacctctcaccctcg 3880688  T
Q  198 gtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcaca 297  Q
    ||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||  |||||||| |    
T  3880689 gtaaaccagagaaacaccaaatcatgccaaacaagatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaa 3880788  T
Q  298 caaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactcc-aaact 395  Q
    |||||||| ||||  ||| |||  |||||  ||| |||||||||||||| | |||| || |||||  ||||  |||||||||||||||   ||| ||||     
T  3880789 caaaaagtctgac--aaaggacatgatatgtggtggtgcaaacaacaaatatatcaaaaggaaaaagctcaactcaacaggacccgcttcttccaaaaca 3880886  T
Q  396 ccctaaacaccttaacaactccaaaa 421  Q
    ||||||||| ||||||| | ||||||    
T  3880887 ccctaaacatcttaacagccccaaaa 3880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 37 - 300
Target Start/End: Original strand, 32935280 - 32935547
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||| |||||||||||||||  |  ||| |||   ||||||||||  |  |||||| ||||||||||||||||  | ||||||||||||||||||    
T  32935280 aaagatcatgcagcttccaccacctcccaacctttgaaccaccgaaagaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatc 32935379  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||    ||| || | || || |||||||||| | || | |||| ||     
T  32935380 tcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccctcacccccgatccatcatagaaacaccataacaagccaaagaag 32935479  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    || ||||||||||||| ||| | ||||||||||||||| |||||| |||||||  | |||||||||||    
T  32935480 attgcagctagacaccaacttctgatctcaaagcaaaagtaaccgacccaccggaatccagcacacaa 32935547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 118 - 282
Target Start/End: Original strand, 16510323 - 16510492
Alignment:
Q  118 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaaca 213  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||    ||| |||||||||||||||| |    
T  16510323 aaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcaccccttgccctcggtacaccagagaaaaa 16510422  T
Q  214 ccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggccca 282  Q
    ||| |||| |||||||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||    
T  16510423 ccatatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggccca 16510492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 37 - 306
Target Start/End: Complemental strand, 9224182 - 9223909
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||||||||||||||||||   |  |||| | |  |||||||||  ||||  |||||||||||| ||||  ||| ||||||||||||||||||||    
T  9224182 aaagatcattcagcttccaccaccgcacaacctccggtgcaccgaaagagcaccaataaaagcccaaaaccaaaactgaaccaaagaactgactcccgat 9224083  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc---cccacggtacaccagagaaacaccaaatcacgtc-aaacaa 231  Q
    ||||||||||||| |||| |||||||||||||||||||||| | | ||||||||||   ||| |||| ||||| || |||||||||    ||| ||||||    
T  9224082 ctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggcaccctcacccccggtccaccaaaggaacaccaaagtcggtcaaaacaa 9223983  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagta 306  Q
     || ||||  ||||||| |||||||||||| |||||||| |||||||||||||   | ||| |||||||||||||    
T  9223982 gattgcagaaagacaccaactcccgatctcgaagcaaaa-taaccggcccaccagcatccatcacacaaaaagta 9223909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 94 - 300
Target Start/End: Complemental strand, 3117576 - 3117364
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||  | ||||| || |||||||||      
T  3117576 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccct 3117477  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtc-aaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgct 287  Q
      ||| ||| |||||||||||| ||||||||| ||| ||||||| || ||| |||||| ||||||||| ||||| |||| |||| ||||||||||| |      
T  3117476 cgcccccggaacaccagagaaaaaccaaatcaagtcaaaacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactgaa 3117377  T
Q  288 aaccagcacacaa 300  Q
    ||||| |||||||    
T  3117376 aaccaacacacaa 3117364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 92 - 306
Target Start/End: Original strand, 26534712 - 26534931
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaaga---actgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 188  Q
    ||||||||||||| ||||||||| |||||||   |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  26534712 aaaaagcccaaaaccaaacttgaaccaaagaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggcca 26534811  T
Q  189 c--cccccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccgg-cccaccg 285  Q
    |  | ||| ||||  |||||||||||||||| ||     ||| || || ||||  |||||||  ||||||||||| |||||||| ||||||| ||||||     
T  26534812 cctcacccgcggtctaccagagaaacaccaagtctgccaaaagaagattgcagaaagacaccagctcccgatctcgaagcaaaa-taaccggccccacca 26534910  T
Q  286 ctaaccagcacacaaaaagta 306  Q
     || ||| |||||||||||||    
T  26534911 gtatccaacacacaaaaagta 26534931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 94 - 306
Target Start/End: Complemental strand, 21266196 - 21265983
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac--cc 191  Q
    ||||||||||| ||||||||| ||| | |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| |||  |     
T  21266196 aaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatcataaggccacctca 21266097  T
Q  192 cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaacc 291  Q
    ||| | ||  ||||||||||||||||| |   |||||  |||| ||||  |||||||  ||||||||||| |||||||| ||||||||| |||   | ||    
T  21266096 ccctccgtttaccagagaaacaccaaagccaatcaaaataaattgcagaaagacaccagctcccgatctcgaagcaaaa-taaccggccaaccagcatcc 21265998  T
Q  292 agcacacaaaaagta 306  Q
    | |||||||||||||    
T  21265997 accacacaaaaagta 21265983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 26216015 - 26216112
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  26216015 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 26216112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 13423607 - 13423482
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||| ||||||||||||||||  || |||| | |  | |||||||||||||| |||||||| || ||||||||| ||||||||| ||||| ||||    
T  13423607 aaaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaaaccatataaagcccataaccaaacttgagccaaagaaccgactctcgat 13423508  T
Q  136 ctcgaatcaaaagtgatcggcccacc 161  Q
    |||||||||||||||||||| |||||    
T  13423507 ctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 21265069 - 21264878
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac--cc 191  Q
    ||||||||||| ||||||||| ||| | |||| ||||||||||||||||||||||  |||||||||| || ||| |||||||||||| |||| |||  |     
T  21265069 aaagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagctatcggcccactagtcttcaggaccaaatcataaggccacctca 21264970  T
Q  192 cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    ||| ||||  || |||||||||||||| |  ||||||  |||| ||||  |||||||  ||||| ||||| |||||||| |||||||||||||    
T  21264969 ccctcggtttactagagaaacaccaaagccagtcaaaacaaattgcagaaagacaccagctccctatctcgaagcaaaa-taaccggcccacc 21264878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 12794200 - 12794099
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaag-tgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    |||||||| ||||  |||||||  || ||||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||||| ||||||| ||||    
T  12794200 aaaaagccaaaaactaaacttggacccaagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacacc 12794101  T
Q  191 cc 192  Q
    ||    
T  12794100 cc 12794099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 300
Target Start/End: Original strand, 15132585 - 15132730
Alignment:
Q  158 caccagactttaggaccaaatcagaagggcacccc----ccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactc 253  Q
    ||||||||||||| || ||||||  ||||||||||    || | ||||| ||||||| ||||| |||| ||||||||  || |||||||| |||||||||    
T  15132585 caccagactttagaacaaaatcaacagggcacccctcgcccccagtacatcagagaa-caccatatcaagtcaaacaggattgcagctagtcaccgactc 15132683  T
Q  254 ccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    |||||||| |||||||| ||||||||||||||  ||||| |||||||    
T  15132684 ccgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaa 15132730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 33968615 - 33968736
Alignment:
Q  99 ccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cc 193  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||  ||||| |||||  |  |||||||||||||| |||||    ||    
T  33968615 ccaaaatcaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccaccccatacc 33968714  T
Q  194 cacggtacaccagagaaacacc 215  Q
    | |||| |||||||||||||||    
T  33968715 ctcggttcaccagagaaacacc 33968736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 15120537 - 15120624
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaa 123  Q
    |||||||||  ||||||||||||||| ||| |||| |||  ||| ||||||||||||||||||||||||  |||||||| ||||||||    
T  15120537 aaaagatcaaccagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaactaaacttgagccaaagaa 15120624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 34105468 - 34105410
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatca 180  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||    
T  34105468 aactgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaatca 34105410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 34090418 - 34090374
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  34090418 aactgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 15944116 - 15944020
Alignment:
Q  81 aaagaaaccataaaaagcccaaaat-caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaa 176  Q
    ||||||| | ||||||||||||||  |||  |||| |||| ||||||||||| || ||| ||||||||||||||||| ||||| |||| | ||||||    
T  15944116 aaagaaaacctaaaaagcccaaaaaacaagattgaaccaaggaactgactccagaactctaatcaaaagtgatcggctcaccaaacttcaagaccaa 15944020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 34092866 - 34092806
Alignment:
Q  106 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||  |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  34092866 caaacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 34092806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 7546464 - 7546499
Alignment:
Q  131 ccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagact 7546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 512
Target Start/End: Original strand, 16510587 - 16510711
Alignment:
Q  387 ctccaaactccctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaat 486  Q
    ||||||||||| ||||||||| ||| || | ||||||| || ||| |||| |||||||||| || ||||||   ||| | ||||  |||||||| |||||    
T  16510587 ctccaaactccataaacacctaaaccacccgaaaagcagaaacaagagctagtgacgacgaacatggacccgtgtaagagaggtttcctccaaaggaaat 16510686  T
Q  487 catccccacgaaacacccgtctcctc 512  Q
    || |||||  ||||||||| ||||||    
T  16510687 ca-ccccaacaaacacccgcctcctc 16510711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 32316438 - 32316393
Alignment:
Q  107 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgat 152  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||||||    
T  32316438 aaacttgaatcaaagaacttactaccgatctcgaatcaaaagtgat 32316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 3117280 - 3117220
Alignment:
Q  387 ctccaaactccctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacga 447  Q
    ||||||||||| ||||||||| ||| || | |||||||||| ||| |||| ||||||||||    
T  3117280 ctccaaactccataaacacctaaaccacccgaaaagcacaaacaagagctagtgacgacga 3117220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 12129264 - 12129228
Alignment:
Q  130 cccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  12129264 cccgatctcgaatcaaaagtgatcggaccatcagact 12129228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 2e-99; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 37 - 503
Target Start/End: Complemental strand, 8745293 - 8744824
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||| |||||||||| |||| ||| |||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||    
T  8745293 aaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgatccaacgaactgaatcccgatc 8745194  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    ||| |||| |||||||||||||||| |||||  |||||||     
T  8745193 tcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtgcaccagagaaacaccagatcacaccaaacaac 8745094  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggta 332  Q
    || |||||||||||||| || |||||||| |||||||| ||||||||||||||  ||||||||||||||||| |||||  |||||||  ||||| ||||     
T  8745093 attgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaaaaagcatgac--aaacgacatgatatgcggtg 8744996  T
Q  333 gtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatcaa 431  Q
    |||||||||||||| |||||| || || ||  ||||  |||||| ||| ||||  ||||||||  | ||||||||||||||||   |||| | ||| |||    
T  8744995 gtgcaaacaacaaatagatcaaaaggagaaggctcaactcaacaagactcgcttcctccaaacatcgtaaacaccttaacaaccgaaaaaacgcaaacaa 8744896  T
Q  432 cagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacgaaacacc 503  Q
      ||| |||||||||| |||||| || | ||||||||| | ||||||||||| |||| |||||  |||||||    
T  8744895 gggctagtgacgacgaacaaggaaccgagtaacaaaggaaacctccaaaagagatcacccccaacaaacacc 8744824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 140 - 320
Target Start/End: Complemental strand, 44755663 - 44755480
Alignment:
Q  140 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacggtacaccagagaaacaccaaatcacgtcaaacaaaatag 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcaccacggtacaccagagaaacaccaaatcacgtcaaacaaaatag 44755564  T
Q  237 cagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgact 320  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  44755563 cagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaaaaagtatgacgaaaacgact 44755480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 306
Target Start/End: Original strand, 6716643 - 6716950
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaacc-aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccc 100  Q
    ||||| |||||||| |||| ||||| ||||| || ||||||||| |||||||||||||||| ||| | || |||  |||||||||||||||||||| |||    
T  6716643 caaagctgagccacatccggaaaaa-tcttatccgaaaagatcaatcagcttccaccacctctcgacttc-gatccaccgaaagaaaccataaaaaaccc 6716740  T
Q  101 aaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----c 196  Q
    || | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||| ||    |    
T  6716741 aagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccctcactctc 6716840  T
Q  197 ggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcac 296  Q
    ||||||||||||||||| ||||||| | |||| || || |||||||||||||||||||||||||||||| |||| |||| |||||||||  |||||||||    
T  6716841 ggtacaccagagaaacatcaaatcaagccaaataagattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcac 6716940  T
Q  297 acaaaaagta 306  Q
     |||||||||    
T  6716941 gcaaaaagta 6716950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 37 - 488
Target Start/End: Original strand, 42533194 - 42533648
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||| ||||| | |||||||||  || ||||||||  |||||||||||||||||||||||||||  ||||||| | |||||| | ||||||||||||    
T  42533194 aaagatcgttcagttgccaccacctcacgacctctgatccaccgaaagaaaccataaaaagcccaaac-caaacttaagccaaaggattgactcccgatc 42533292  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    ||| || | |||||||||||||||| ||| || |||| ||     
T  42533293 tcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaaacaccacatcgcgccaaataag 42533392  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggta 332  Q
    |  |||||| ||||| ||||||||||||| |||||||| ||||||||||| ||   ||||||||||||||||||||||  |||||||  || |||||||     
T  42533393 aatgcagctggacacagactcccgatctcgaagcaaaagtaaccggcccatcggagaccagcacacaaaaagtatgac--aaacgacaagagatacggtg 42533490  T
Q  333 gtgcaaacaa-caaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatca 430  Q
    |||||||||| |||||| |||| || |||||  ||||   |||| |||| ||||  |||||| | || |||||||||||||||| | |||| ||||| ||    
T  42533491 gtgcaaacaaccaaacaaatcaaaaggaaaaggctcagaacaacgggacacgcttcctccaaccaccttaaacaccttaacaacccaaaaatcacaaaca 42533590  T
Q  431 acagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatca 488  Q
    | |||   ||||||||| || |||||| | ||||| | |   ||||||||||||||||    
T  42533591 agagccaatgacgacgaacatggacccgagtaacagatgctacctccaaaagaaatca 42533648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 351
Target Start/End: Complemental strand, 1320969 - 1320619
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    |||||||||||||| || ||||| | ||||| || |  |||||| ||| | ||||| ||| ||| |||| |||  |||||||||||||||||||||||||    
T  1320969 caaagttgagccacatctgaaaaga-tcttatccgagggatcatacagttgccaccccctctcgacctccgatccaccgaaagaaaccataaaaagccca 1320871  T
Q  102 aaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccac 196  Q
    ||| |||| ||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||| |    
T  1320870 aaaccaaaacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcaccccc 1320771  T
Q  197 ggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcac 296  Q
    | |||| ||||||||||||||||  || ||||||||||  |||||||||||| |||||||||||| ||||||||  || ||| ||||||  ||||| |||    
T  1320770 gatacatcagagaaacaccaaattgcgccaaacaaaattacagctagacaccaactcccgatctcgaagcaaaa-aaatcggtccaccggaaaccaacac 1320672  T
Q  297 acaaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagat 351  Q
    | ||||||||||  | || ||||  ||||| |||| |||||||||||||||||||    
T  1320671 agaaaaagtatg--gcaaccgacatgatatgcggtggtgcaaacaacaaacagat 1320619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 24324723 - 24324957
Alignment:
Q  22 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaa 120  Q
    |||| ||| ||||| ||||||||||||||||||||||||  ||| |||| |||  ||| |||||||||||||||||||||||| |||| ||||| |||||    
T  24324723 aaaagctcctaaccgaaagatcattcagcttccaccacccctcgacctccgatccacctaaagaaaccataaaaagcccaaaaccaaaacttgagccaaa 24324822  T
Q  121 gaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc----ccacggtacaccagagaaacacca 216  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||    || |||||||||| ||||||||||    
T  24324823 gaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccctaaaccccggtacaccaaagaaacacca 24324922  T
Q  217 aatcacgtcaaacaaaatagcagctagacaccgac 251  Q
    ||||||  ||||||| || ||| ||||||||||||    
T  24324923 aatcacaccaaacaagattgcaactagacaccgac 24324957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 83 - 413
Target Start/End: Complemental strand, 16954748 - 16954414
Alignment:
Q  83 agaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag 181  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  16954748 agaaaccataaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcag 16954649  T
Q  182 aagggcaccccccac----ggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccg 277  Q
    ||||||||||| |||    | ||||||||||||| |||||||| || ||| ||| || ||||||||||||| |||| ||||||  |||||||| ||| ||    
T  16954648 aagggcacccctcacctctgatacaccagagaaagaccaaatcgcgccaaccaagattgcagctagacaccaactctcgatctggaagcaaaagtaatcg 16954549  T
Q  278 gcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagat-cataagaaaatactcatttcaacag 376  Q
    ||||| ||  ||||||||||||  |||||||||  |||||||  ||||| | || |||||||||||||||| || || | |||||  ||||  |||||      
T  16954548 gcccatcggaaaccagcacacagtaagtatgac--aaacgacaagatatgcagtggtgcaaacaacaaacatatccaaaggaaaaggctcaactcaacga 16954451  T
Q  377 gacccgctgactccaaactccctaaacaccttaacaa 413  Q
    ||||||||  |||||||  ||||||||||||||||||    
T  16954450 gacccgctacctccaaaaaccctaaacaccttaacaa 16954414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 94 - 300
Target Start/End: Complemental strand, 38306344 - 38306133
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc- 192  Q
    ||||||||||| | |||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||     
T  38306344 aaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccct 38306245  T
Q  193 ---ccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
       || | |||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||||| |||| |||| |||| |||||||||||||  |    
T  38306244 cgccccctgtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaa 38306145  T
Q  289 accagcacacaa 300  Q
    ||||||||||||    
T  38306144 accagcacacaa 38306133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 44755764 - 44755657
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44755764 caaagttgagctacctccgaaaaaactcttatccaaaagatcattcagcttccaccacctatcgacctctgatataccgaaagaaaccataaaaagccca 44755665  T
Q  102 aaatcaaa 109  Q
    ||||||||    
T  44755664 aaatcaaa 44755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 3419654 - 3419879
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  |||||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |  |||||||||      
T  3419654 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccct 3419753  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| ||||| |||||||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||| |||| |||| ||||||| | |||  |    
T  3419754 cgcccccggtataccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaa 3419853  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  3419854 accagcacacaatatgtaagacgaaa 3419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 85 - 342
Target Start/End: Original strand, 16828924 - 16829184
Alignment:
Q  85 aaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaa 183  Q
    |||||||||||||||||||| |||| |||||  |||||||||||||  |||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  16828924 aaaccataaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaa 16829023  T
Q  184 gggcaccccccac----ggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggc 279  Q
    ||||||||| |||    | ||||| |||||||||||||||| || ||| ||| || |||| |||||||| |||| | ||||  |||||||| ||| || |    
T  16829024 gggcacccctcacccctgatacactagagaaacaccaaatcgcgccaaccaagattgcaggtagacaccaactctcaatctggaagcaaaagtaatcgac 16829123  T
Q  280 ccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaa 342  Q
    ||| ||  ||||||||||||| |||| ||||  |||||||  ||||| | || ||||||||||    
T  16829124 ccatcggaaaccagcacacaataagtttgac--aaacgacaagatatgcagtggtgcaaacaa 16829184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 94 - 300
Target Start/End: Original strand, 47325883 - 47326094
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  |||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||| || | |||||||      
T  47325883 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccct 47325982  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| || ||||||| || || ||||||| ||||||||||||||| |||| |||| |||||||||| ||  |    
T  47325983 cgcccccggtacaccagagaaaaaccaaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaaa 47326082  T
Q  289 accagcacacaa 300  Q
    ||||||||||||    
T  47326083 accagcacacaa 47326094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 37 - 282
Target Start/End: Complemental strand, 3478492 - 3478243
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    |||||||||||||||||| |||||| |||  ||| |||  |||||||||| |||| | |||||||||||  || ||||| |||||||||| |||||||||    
T  3478492 aaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacacca-acaaagcccaaaactaatcttgagccaaagaactaactcccgat 3478394  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    ||| || |  || ||||||  |||  |||| | ||||| |    
T  3478393 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctcacccccgatcaactagagaattaccctatcaagccaaacca 3478294  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggccca 282  Q
    ||| |||||||| ||||||||||||||| | |||||||| ||| |||||||    
T  3478293 aattgcagctagtcaccgactcccgatcccgaagcaaaagtaatcggccca 3478243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 94 - 316
Target Start/End: Complemental strand, 10244265 - 10244039
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    |||| |||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || |||||||||      
T  10244265 aaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccct 10244166  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||   ||||||||| || ||| |||||  ||||||||||||||| |||| |||| |||| ||| ||||  |    
T  10244165 ctcccccggtacaccagagaaaaaccaaatc-tatcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaaa 10244067  T
Q  289 accagcacacaaaaagtatgacgaaaac 316  Q
    |||||||||||| | ||| |||||||||    
T  10244066 accagcacacaatatgtaagacgaaaac 10244039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 93 - 314
Target Start/End: Complemental strand, 3867200 - 3866975
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||| |||||||| | ||||| ||||||| || ||| |||||     
T  3867200 aaaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccaccct 3867101  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgct 287  Q
       ||| |||||||||||||||| |||| |||| |||||||||| || | |||||||| ||||||| ||||||| |||||||| ||| || |||||||      
T  3867100 tcgccctcggtacaccagagaaaaaccatatcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccaccg-a 3867002  T
Q  288 aaccagcacacaaaaagtatgacgaaa 314  Q
    |||||| |||||| | ||| |||||||    
T  3867001 aaccaggacacaatatgtaagacgaaa 3866975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 92 - 284
Target Start/End: Complemental strand, 12480971 - 12480777
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac-- 189  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| |||      
T  12480971 aaaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggacaaaatcagaaggccacct 12480872  T
Q  190 cccccacggtacaccagagaaacaccaaatcacgtc-aaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    | ||| |||| |||  ||||||||||||| |   || ||||||||| ||||  |||||||  ||||||||||| |||||||| ||| |||||||||    
T  12480871 cacccccggtccacgtgagaaacaccaaagccaatcaaaacaaaattgcagtaagacaccagctcccgatctcgaagcaaaa-taatcggcccacc 12480777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 6584993 - 6584894
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  6584993 aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccc 6584894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 93 - 285
Target Start/End: Original strand, 35745824 - 35746019
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | ||||||| |||||||  ||||| ||||||||||||||||||||||| ||||| |||||||||| || |||| || |||||||||     
T  35745824 aaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccc 35745923  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccg 285  Q
       ||| ||||||| ||||| ||||||| |||| ||||||||| || || ||||| |||| ||| |||||||| |||||||| ||||||| ||||||    
T  35745924 tcgcccccggtacatcagag-aacaccatatcaagtcaaacaagattgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccg 35746019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 93 - 282
Target Start/End: Complemental strand, 34390046 - 34389853
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac--- 189  Q
    |||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||       
T  34390046 aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcc 34389947  T
Q  190 -cccccacggtacaccagagaaacaccaaatcacgtc-aaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggccca 282  Q
     | ||| | ||||||||||| ||||||| |||| ||| |||||  || ||| ||||||||| ||| | |||||| |||||||| |||| ||||||    
T  34389946 tcacccccagtacaccagag-aacaccatatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggccca 34389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 108 - 300
Target Start/End: Complemental strand, 33435178 - 33434982
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacac 203  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |  |||||||||    ||| ||||||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacac 33435079  T
Q  204 cagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    |||||||| ||||||||| |  ||||||| ||  || |||||| | |||| |||||||| |||||||| ||| ||||||||||  ||||| |||||||    
T  33435078 cagagaaa-accaaatcaagctaaacaaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacacacaa 33434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 125 - 300
Target Start/End: Complemental strand, 25160867 - 25160687
Alignment:
Q  125 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatc 220  Q
    ||||| ||||||||||||||||||| ||||| |||||||||| ||| ||||||| || |||||||||    ||| |||||||||||||||| |||||| |    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccctcgccctcggtacaccagagaaaaaccaaacc 25160768  T
Q  221 acgtcaaac-aaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    | ||||||| ||||||||| |||||| ||||||||||||| |||||| |||| || |  |||||||  |||||| ||||||    
T  25160767 aagtcaaacaaaaatagcaactagaccccgactcccgatcccaaagccaaatgaatcatcccaccgaaaaccagtacacaa 25160687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 93 - 262
Target Start/End: Original strand, 41089745 - 41089919
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||| ||||| | |||||||  |||||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| || || ||||||     
T  41089745 aaaagctcaaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccc 41089844  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctca 262  Q
       ||| || ||||||||||||| ||||||||| |||||||||| || | |||||||| || |||| ||||||||    
T  41089845 tcgcccccgatacaccagagaaaaaccaaatcaagtcaaacaaagattgtagctagaccccaactctcgatctca 41089919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 5860286 - 5860511
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | ||||||   ||||||| |||||||||||||||||||||||| ||| |||||||| |||| ||| ||||||| || |||||||||      
T  5860286 aaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccct 5860385  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||  ||||||| |||||||   | |||||||| || |||| |||||  |||||||||||||| |||| |||| |||||||||| ||  |    
T  5860386 cgcccccggtacagtagagaaaaaccaaattcagccaaacaaagattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcgaaa 5860485  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  5860486 accagcacacaatatgtaagacgaaa 5860511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 283
Target Start/End: Original strand, 11379122 - 11379318
Alignment:
Q  92 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||||  | |||||||| |||||||||||    
T  11379122 aaaaagcccaaaaccaaaacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcacc 11379221  T
Q  191 c----cccacggtacaccagagaaacacc-aaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccac 283  Q
    |    ||| |||| |||||||||||||||  | ||| | ||||||| || | ||||||||||| |||||||||||  || ||||| |||||| |||||    
T  11379222 ccaaaccctcggtccaccagagaaacaccgtagtca-gccaaacaagattgtagctagacaccaactcccgatcttgaatcaaaaataaccgacccac 11379318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 300
Target Start/End: Complemental strand, 37795072 - 37794872
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccc 193  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| || ||||||||||     
T  37795072 aaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccct 37794973  T
Q  194 cacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaacca 292  Q
    | |    | ||   |  ||||||||||| |||||||||| || |||||||||| || |||||||||||| |||| |||| |||||||||||||  |||||    
T  37794972 cgc----cccc---ggtacaccaaatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaacca 37794880  T
Q  293 gcacacaa 300  Q
    ||||||||    
T  37794879 gcacacaa 37794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 13311908 - 13311824
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||| |||||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcacccc 13311824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 9349832 - 9349757
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 169  Q
    ||||||||||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 9349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 46133268 - 46133371
Alignment:
Q  87 accataaaaagcccaaaatc-aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 185  Q
    |||| ||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||||||| ||||||| |||||||||| || ||||||||||||||    
T  46133268 accaaaaaaagcccaaaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagg 46133367  T
Q  186 gcac 189  Q
    ||||    
T  46133368 gcac 46133371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 38485640 - 38485541
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||||||||| |||||| || ||| | | |||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||    
T  38485640 aaaaagcccaaaaccaaactagaaccagata-ctgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccc 38485542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 47457003 - 47457118
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 175  Q
    |||||||||| ||||||||| ||||| ||  |||||||| ||||||||||||||||| ||||| ||||||||| |||||| ||| ||||||| ||||||     
T  47457003 accgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacct 47457101  T
Q  176 aatcagaagggcacccc 192  Q
    ||||||| |||||||||    
T  47457102 aatcagacgggcacccc 47457118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 23983280 - 23983187
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 185  Q
    ||||| ||||||| ||||||||| | || ||| |||||||||||||||||||||||  ||||| |||||||||||| | |||||||| ||||||    
T  23983280 aaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattagaagg 23983187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 48058651 - 48058725
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    ||||| |||||| ||||||||| ||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||    
T  48058651 aaaaggccaaaaccaaacttgagccaaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagactt 48058725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 9428105 - 9428186
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaa 177  Q
    ||||||| | |||||| || || ||||||||||| | |||||||||||||||||||||||| |||||||||  |||||||||    
T  9428105 agcccaagaccaaactagaaccgaagaactgacttctgatctcgaatcaaaagtgatcggctcaccagactacaggaccaaa 9428186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 36449224 - 36449069
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaa-ccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||||  ||||||||||||| ||  |||| |||  ||||||||||| ||| || ||| ||||||   ||||||| ||||||||||||||||  ||    
T  36449224 aaagatcattatgcttccaccacctctcaacctccgatccaccgaaagaaaaccaaaataagtccaaaacataacttgaaccaaagaactgactcctaat 36449125  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||| ||||  |||  |||||| |||||| | || |||||||||||||||||||    
T  36449124 ctcgaat-aaaaacgataagcccactagacttcaagatcaaatcagaagggcacccc 36449069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  131 ccgatctcgaatcaaaagtgatcggcccaccagac 165  Q
    |||||||||||||||||||||||||||||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 27993568 - 27993606
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagact 27993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 35206725 - 35206763
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Original strand, 44353585 - 44353623
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcgg 155  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  44353585 caaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 22568093 - 22568208
Alignment:
Q  78 ccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaa 176  Q
    |||||||||  | ||||||  ||||||||||| ||||| ||||| |||| |||||||||| ||||||||||| ||| | || |||| ||   | ||||||    
T  22568093 ccgaaagaacacctaaaaaatccaaaatcaaaacttgaaccaaaaaactaactcccgatcacgaatcaaaagcgattgacctaccaaaccacatgaccaa 22568192  T
Q  177 atcagaagggcacccc 192  Q
    |||||||| |||||||    
T  22568193 atcagaagagcacccc 22568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 166
Target Start/End: Complemental strand, 25153265 - 25153231
Alignment:
Q  132 cgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||| ||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagact 25153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 2e-87; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 2 - 505
Target Start/End: Original strand, 26045871 - 26046376
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    |||||||||| ||||||||||||  ||| || |  |||||||| |||||||||||  |||| || |||| |||   |||| ||||||||||||||| |||    
T  26045871 caaagttgagtcacctccgaaaag-ctcatatctgaaagatcaatcagcttccacagcctaacgacctccgatcccccgagagaaaccataaaaagtcca 26045969  T
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaa-tcagaagggcacccccca---cg 197  Q
    ||| ||||||||| |||||  ||| |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| || ||||||||  |   ||    
T  26045970 aaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcaccagactttaggaccaaactcaaaaaggcaccccttaacccg 26046069  T
Q  198 gtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcaca 297  Q
    |||||||||||||||||||||||||| |||| || || |||||||| |||||||||||| |||| |||||||||||| | |||||||   ||| ||||||    
T  26046070 gtacaccagagaaacaccaaatcacgccaaataagattgcagctagccaccgactcccggtctcgaagcaaaattaatctgcccaccagaaactagcaca 26046169  T
Q  298 caaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagatcataagaa-aatactcatttcaacaggacccgctgactccaaactc 396  Q
    |||||||||||||  |||||||  ||||| |||| |||||||||||||||| |||| ||||| ||  |||| | ||||| ||||||||  ||| |||| |    
T  26046170 caaaaagtatgac--aaacgacatgatatgcggtggtgcaaacaacaaacatatcaaaagaagaaggctcagtgcaacatgacccgcttcctctaaacac 26046267  T
Q  397 cctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacg 496  Q
    ||||||||||| ||  || |||||| ||||| ||| |||| |||| ||||| ||||||||| | ||||| ||| || ||||||||||||||| |||||      
T  26046268 cctaaacacctaaaacaccccaaaaacacaaacaagagctagtgaagacgaacaaggacccgagtaacagaggcagtctccaaaagaaatcaaccccaac 26046367  T
Q  497 aaacacccg 505  Q
    |||||||||    
T  26046368 aaacacccg 26046376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 36 - 512
Target Start/End: Original strand, 13954174 - 13954651
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||| |||| ||||||||||| ||  | || |||  |||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||    
T  13954174 aaaagatcaatcagtttccaccacctttcaacttccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgat 13954273  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    ||||||||||||||||||| |||||| |||||| ||    
T  13954274 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaa-ggcacccctcaccttcggtacaccagagaaacacaaaatcaagtcaaataa 13954372  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggt 331  Q
     || ||||||||||||||||||  |||||| |||||||| ||||||||||||||  |||||||| ||||||| ||||||  |||||||  ||||  |||     
T  13954373 gattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccagcatacaaaaattatgac--aaacgacatgataagcggc 13954470  T
Q  332 agtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatca 430  Q
     ||||||||||||||| || || || | |||  |  | ||| || || ||  ||  |||||||| ||||||||||||||||||||||| || | ||| ||    
T  13954471 ggtgcaaacaacaaaccgaccaaaaggtaaaggcatagttccac-gggccaactccctccaaacaccctaaacaccttaacaactccagaaacgcaaaca 13954569  T
Q  431 acagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacgaaacacccgtctcctc 512  Q
    | |||| |||||||||| ||| ||||  ||||||||| | | |||||| | ||||||| |||||  ||||||||||||||||    
T  13954570 agagctagtgacgacgaacaaagacctgaataacaaacgcaacctccagaggaaatcacccccaacaaacacccgtctcctc 13954651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 37 - 421
Target Start/End: Original strand, 14302371 - 14302758
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||| ||||||||||||||| ||| |||| |||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||    
T  14302371 aaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgctccaaagaactgactcccaatc 14302470  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    ||||| ||||||||||| | ||||||||||||||||||||| |||||||||| ||    ||| || |||||||||||||||||| |||||| ||||| |     
T  14302471 tcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctcgatacaccagagaaacaccagatcacgccaaactag 14302570  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggta 332  Q
     | |||||||||||| ||||||||||||| |||||||| |||| || || ||   ||||||||||||||||| |||||  |||||||   ||||   ||     
T  14302571 cttgcagctagacacggactcccgatctcgaagcaaaagtaacggggcccccagaaaccagcacacaaaaagaatgac--aaacgacataatatgatgtg 14302668  T
Q  333 gtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaa 421  Q
    |||||||||||||| |||||| || |||||| ||||  ||||| |||||||||  ||||||||  | ||||||||| |||||| ||||||    
T  14302669 gtgcaaacaacaaatagatcaaaacgaaaatgctcaactcaacgggacccgcttcctccaaacatcttaaacacctaaacaaccccaaaa 14302758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 34 - 310
Target Start/End: Original strand, 7195178 - 7195457
Alignment:
Q  34 ccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccg 133  Q
    ||||||||| ||||||||||||| |||| ||| |||| |||  ||||||| ||||||||||| ||||||| || ||||||| ||||||||||||||||||    
T  7195178 ccaaaagattattcagcttccacgacctctcgacctccgatccaccgaaaaaaaccataaaa-gcccaaactctaacttgagccaaagaactgactcccg 7195276  T
Q  134 atctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac---ggtacaccagagaaacaccaaatcacgtcaaaca 230  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||| |||   |||||||||||||||||| |||||||| ||||||    
T  7195277 atctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccctcaccctggtacaccagagaaacactaaatcacgccaaaca 7195376  T
Q  231 aaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccac-cgctaaccagcacacaaaaagtatgac 310  Q
    | || |||||||| ||||||||||||||||| |||||||| |||| |||||||  |  ||||| |||||||||||||||||    
T  7195377 atattgcagctagccaccgactcccgatctcgaagcaaaagtaactggcccactggaaaaccaacacacaaaaagtatgac 7195457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 37 - 310
Target Start/End: Complemental strand, 8297608 - 8297331
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||| |||||| ||||||||||||  || |||| |||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  8297608 aaagaccattcaacttccaccacctcacgacctccgattcaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatc 8297509  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    ||||||||||| | ||  ||||||||  |||||| ||||||||||||||||||||    ||| |||||||| ||||||||||||||||| |  |||||||    
T  8297508 tcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccctcaccctcggtacactagagaaacaccaaatcaagcaaaacaaa 8297409  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgac 310  Q
    || ||||||||||||| |||| ||||||| |||||||| ||| |||||||| |  ||||||| || ||||||||||||    
T  8297408 attgcagctagacaccaactctcgatctcgaagcaaaagtaatcggcccactgaaaaccagcgcagaaaaagtatgac 8297331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 38 - 278
Target Start/End: Original strand, 7391979 - 7392217
Alignment:
Q  38 aagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 137  Q
    ||||||| || ||||| ||||||| ||| |||| |||  ||||||||||||||||||| |||||||| |||   ||  ||||||||||||||||||||||    
T  7391979 aagatcaatccgcttcaaccacctctcgacctccgatccaccgaaagaaaccataaaa-gcccaaaaccaa---tg--ccaaagaactgactcccgatct 7392072  T
Q  138 cgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaaa 233  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||| ||||||| |||||||||||||||||| | ||||||| |    
T  7392073 cgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggtacatcagagaaacaccaaatcaagccaaacaaga 7392172  T
Q  234 tagcagctagacaccgactcccgatctcaaagcaaaattaaccgg 278  Q
    | ||||||||||||| |||||||||||| |||||||| |||||||    
T  7392173 ttgcagctagacaccaactcccgatctcgaagcaaaagtaaccgg 7392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 33258827 - 33259050
Alignment:
Q  41 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcga 140  Q
    |||||||||||||||| | || ||| |||| |||  |||||||||||||||||||||||||||  ||| || || |||||||||| ||||| ||||||||    
T  33258827 atcattcagcttccactatctctcgacctccgatccaccgaaagaaaccataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcga 33258926  T
Q  141 atcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacaccagagaaacaccaaatcacgtcaaacaaaatag 236  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||    ||||||||||||||||||||||||| || ||||||| || |    
T  33258927 atcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccctcaccttcggtacaccagagaaacaccaaatcgcgccaaacaagattg 33259026  T
Q  237 cagctagacaccgactcccgatct 260  Q
     ||||||| |||||||||||||||    
T  33259027 tagctagataccgactcccgatct 33259050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 94 - 298
Target Start/End: Complemental strand, 34378181 - 34377972
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |      
T  34378181 aaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactcct 34378082  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| ||||||||||||||||  |||||||| |||||||||| || ||||||||||  |||||||||||||| |||| |||| |||||||| ||||  |    
T  34378081 tgcccccggtacaccagagaaaacccaaatcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaa 34377982  T
Q  289 accagcacac 298  Q
    ||||||||||    
T  34377981 accagcacac 34377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 698444 - 698219
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  ||||||  |||||||||||||||||||||||| |||||| |||||||||| ||| ||||||| || |||||||||      
T  698444 aaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccct 698345  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| |||||||||| || ||| |||||| | ||||||||||||| |||| |||| |||||||||||    |    
T  698344 cgcccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaaaa 698245  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  698244 accagcacacaatatgtaagacgaaa 698219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 95 - 300
Target Start/End: Complemental strand, 18593325 - 18593115
Alignment:
Q  95 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc--- 191  Q
    |||||||||| | |||||||  ||||||||| ||||||||||||||||||||||||||| |||||| | ||| ||| ||||||| || |||||| ||       
T  18593325 aagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctc 18593226  T
Q  192 -cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaa 289  Q
     ||| |||||||| ||||||| ||||||||| |||||||||| || ||| |||||| ||||||||||||||| |||| |||| |||||||||||||  ||    
T  18593225 gcccccggtacacgagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 18593126  T
Q  290 ccagcacacaa 300  Q
     ||||||||||    
T  18593125 tcagcacacaa 18593115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 37 - 244
Target Start/End: Complemental strand, 25992147 - 25991936
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    |||||||||| |||||||| || ||  || |||| |||  | ||||||||| |||||||||||||||| ||| || || | ||||||||||||| |||||    
T  25992147 aaagatcattaagcttccaacatctcacgacctccgatccatcgaaagaaatcataaaaagcccaaaaccaacctcgagctaaagaactgactctcgatc 25992048  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    |||||||||||| ||| ||||||||||||||||| ||||||  |||||||||| || ||    |||||||||||| ||||| ||||||  |||||||||     
T  25992047 tcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcactcctcatcttcggtacaccagaaaaacatcaaatcgtgtcaaacaag 25991948  T
Q  233 atagcagctaga 244  Q
    || |||||||||    
T  25991947 attgcagctaga 25991936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 93 - 285
Target Start/End: Complemental strand, 29087565 - 29087368
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    ||||||||| || | || ||||| ||||||||||||||| |||||||||||||||| |||| | |||||||||||||| ||||||  || || ||||||     
T  29087565 aaaagcccagaaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaaatagcagagcacccc 29087466  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccg 285  Q
       ||| ||||||| |||||||  |||||| || |||||||||| || |||||||||| ||||||||||||||| |||| |||| |||||||||||||    
T  29087465 tcgcccccggtacaacagagaattaccaaaacaagtcaaacaaagattgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccg 29087368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 21402777 - 21402903
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||| ||| |||||||||||| ||  ||||  ||  |||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||||    
T  21402777 aaaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaaaccataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgat 21402876  T
Q  136 ctcgaatcaaaagtgatcggcccacca 162  Q
    ||||||  |||||||||||||||||||    
T  21402877 ctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 108 - 283
Target Start/End: Original strand, 24072278 - 24072457
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacac 203  Q
    ||||||| |||||||||||||| |||||||| ||||||||| |||| ||| |||||||||||||||||||||||||||||||||    ||| |||| |||    
T  24072278 aacttgaaccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcaccccaaaccctcggtccac 24072377  T
Q  204 cagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccac 283  Q
    |||||||||||   | |    ||||||| ||  |||||| || || |||||||||||  |||||||| ||||||||||||    
T  24072378 cagagaaacactgtagctatccaaacaagattacagctaaacgccaactcccgatcttgaagcaaaagtaaccggcccac 24072457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 39184124 - 39184283
Alignment:
Q  35 caaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaa--cttgatccaaagaactgactcc 131  Q
    |||||||||| ||||||||||| ||||  |  |||||| |  |||||||||| |||| ||||||| ||||| ||||  ||||| |||||||||||||| |    
T  39184124 caaaagatcaatcagcttccactacctcacaacctctggtccaccgaaagaacacca-aaaaagctcaaaaccaaatgcttgaaccaaagaactgacttc 39184222  T
Q  132 cgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||||||||||||||||||||||||||||||   | || |||||||||||||||||||    
T  39184223 cgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcacccc 39184283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 22675322 - 22675398
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttag 170  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  22675322 aaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttag 22675398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 27713153 - 27713058
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 188  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||||||||  ||||||||||| |||||| |||||| || |||| |||||    
T  27713153 aaaagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagacttcaggacccaaccagacgggca 27713058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 39024452 - 39024545
Alignment:
Q  98 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||| |  |||||| |||| |||||||| ||||||||||||||    
T  39024452 cccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccc 39024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 23426425 - 23426339
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcaga 182  Q
    ||||||||| |||| ||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||||| ||||    
T  23426425 agcccaaaaccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaaccaga 23426339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 31721756 - 31721662
Alignment:
Q  98 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||| ||||  ||| ||| ||||||||||||||||||||||||||||| ||||||||||  |||||| || |||| ||||||||||||||||    
T  31721756 cccaaaaccaaaaatgaaccagagaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcacccc 31721662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 8731003 - 8730902
Alignment:
Q  92 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||||| ||| || ||||||||||  | |||||||||| |||||||||    
T  8731003 aaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacc 8730904  T
Q  191 cc 192  Q
    ||    
T  8730903 cc 8730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 270
Target Start/End: Original strand, 17854066 - 17854246
Alignment:
Q  95 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc--- 191  Q
    ||||||||| |  ||||||| ||||| || |||||||||||||||| ||||||| | ||||||||||| |||| | |||||||| ||||||||||||       
T  17854066 aagcccaaagtagaacttgaaccaaataattgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccctc 17854165  T
Q  192 -cccacggtacaccagagaaacaccaaatcacgtc-aaacaaaatagcagctagacaccgactcccgatctcaaagcaaaa 270  Q
     ||| |||| |||||||| ||||||  | |  | | |||||| || | ||||||| ||| |||||||||||||||||||||    
T  17854166 acccccggtccaccagaggaacaccctagccagccaaaacaagattgtagctagagaccaactcccgatctcaaagcaaaa 17854246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 12046308 - 12046265
Alignment:
Q  124 ctgactcccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  12046308 ctgagtcccgatctcgaatcaaaagtgatcggcccaccaaactt 12046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 22675443 - 22675527
Alignment:
Q  222 cgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagta 306  Q
    |||||||| |||  |||||||||| || ||||||| |||| |||||||| |||||||||||||   | ||| |||||||||||||    
T  22675443 cgtcaaaccaaaatgcagctagacgccaactcccggtctcgaagcaaaagtaaccggcccaccagaatccaacacacaaaaagta 22675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 25658132 - 25658217
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccac 160  Q
    |||||||||| |||||||| |||||||||  ||| |||||   |||||||||||||||  ||| |||||||||| |||||||||||    
T  25658132 accgaaagaacaccataaatagcccaaaacaaaaacttgaattaaagaactgactcccagtctagaatcaaaagcgatcggcccac 25658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 25341741 - 25341709
Alignment:
Q  134 atctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||| |||||||||||||||||||||||||||    
T  25341741 atctcaaatcaaaagtgatcggcccaccagact 25341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 8 - 512
Target Start/End: Complemental strand, 25647854 - 25647343
Alignment:
Q  8 tgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatca 107  Q
    |||||||| ||||||||  ||| ||||| |||||||||||| ||| |||||||| ||| |||| |||  ||| ||||||||||||||||||| |||| ||    
T  25647854 tgagccacgtccgaaaag-ctcataaccgaaagatcattcaactttcaccacctctcgacctccgatccaccaaaagaaaccataaaaagcctaaaacca 25647756  T
Q  108 aa--cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtac 201  Q
    ||  ||| | |||||||||  |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||  |||    |||||    
T  25647755 aaaacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcacccttcactcccggtac 25647656  T
Q  202 accagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacac-aa 300  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||| |||||||| ||||||||||| ||  ||||| ||||| ||    
T  25647655 accagagaaacaccaaatcacgccaaacagaattgcagctagacaccgactcccgttctcgaagcaaaagtaaccggcccatcggaaaccaacacacaaa 25647556  T
Q  301 aaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccct 399  Q
    |||| |||||  |||||||  ||||||| || ||||||||||||||||| ||| || |||||  | ||  ||||| |||| ||||  |||||||| ||||    
T  25647555 aaagaatgac--aaacgacatgatatacagtggtgcaaacaacaaacaggtcaaaaggaaaaggcacaactcaacgggactcgcttcctccaaacaccct 25647458  T
Q  400 aaacaccttaacaa-ctccaaaagcacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatc-cccacga 497  Q
    |||||||||||||| ||  |||| ||| | ||| |||| |||||||||| ||||||||| | ||||||||| | ||||| |||  ||||| | ||||| |    
T  25647457 aaacaccttaacaaccttaaaaatcacgaacaagagctagtgacgacgaacaaggacccgagtaacaaaggcaacctcccaaatgaatcaccacccacaa 25647358  T
Q  498 aacacccgtctcctc 512  Q
    |||||||| ||||||    
T  25647357 aacacccgcctcctc 25647343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 37 - 488
Target Start/End: Complemental strand, 37123521 - 37123076
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||| |||||||||||||||||||  ||| |||   | ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||    
T  37123521 aaagatcatacagcttccaccacctatcgaactccgatcctc-gaaagaaaccataaaaagcccaaaaccaaatttgatccaaagaactgactcccaatc 37123423  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    |||||||||||||||||||||||||| | |||||||||||| || ||||||||||    ||  ||||||| |||||||||||||||||||| ||||||||    
T  37123422 tcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaacaccaaatcacgccaaacaaa 37123323  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggta 332  Q
    || |||||||||||||||||||||||||| |||||||| ||        | ||  |||||||||||||||||||||||  ||| | |  ||| | ||       
T  37123322 attgcagctagacaccgactcccgatctcgaagcaaaagta--------atcgaaaaccagcacacaaaaagtatgac--aaatg-catgatgtgcgaag 37123234  T
Q  333 gtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactcc-aaaagcacaatca 430  Q
    ||||||||||| | ||||||| || ||||| |||||  ||||  | |||||||  |||||||| |||||||| |||||||||| || |||| ||||| ||    
T  37123233 gtgcaaacaaccagcagatcaaaaggaaaagactcaactcaatggaacccgcttcctccaaacaccctaaactccttaacaaccccaaaaaacacaaaca 37123134  T
Q  431 acagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatca 488  Q
    | |||| |||||||||| ||||||||| | || || |||  |||||| ||||||||||    
T  37123133 agagctagtgacgacgaacaaggacccgagtaccagaggccgcctccgaaagaaatca 37123076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 78 - 512
Target Start/End: Complemental strand, 14194041 - 14193598
Alignment:
Q  78 ccgaaagaaaccataaaaagcccaaaatcaaa--cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 175  Q
    ||||||||||||||||||||||||||| ||||  ||||| ||||||||| ||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  14194041 ccgaaagaaaccataaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggacca 14193942  T
Q  176 aatcagaagggcacccccca----cggtacaccagagaa-acaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaa 270  Q
    ||||||||||||||||| ||    |||||||||| |||| ||||||||||||| ||| || ||| | ||||||||||||||||||||| || ||||||||    
T  14193941 aatcagaagggcacccctcactcccggtacaccaaagaacacaccaaatcacgccaagcagaattgtagctagacaccgactcccgatatcgaagcaaaa 14193842  T
Q  271 ttaaccggcccaccgctaaccagcacac-aaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagatcataa-gaaaatactcat 368  Q
     ||  |||| || |   ||| ||||||| |||||| |||||  |||||||| |||||||||| ||| |||||| ||||  |||| || |||||  | ||     
T  14193841 gtagtcggcgcatcagaaactagcacacaaaaaagaatgac--aaacgacttgatatacggtggtgtaaacaagaaacgaatcaaaaggaaaaggcacaa 14193744  T
Q  369 ttcaacaggacccgctgactccaaactccctaaacaccttaacaactcc-aaaagcacaatcaacagctggtgacgacgaccaaggacccaaataacaaa 467  Q
     ||||| |||| ||||  |||||||  ||||||||||||||||||| || |||| | | | ||| |||| ||||||||||  |||||||| | |||||||    
T  14193743 ctcaacgggactcgcttcctccaaaaaccctaaacaccttaacaaccccaaaaatcgcgaacaagagctagtgacgacgaataaggacccgagtaacaaa 14193644  T
Q  468 ggtagcctccaaaagaaatcatc-cccacgaaacacccgtctcctc 512  Q
    || | ||||| |||  ||||| | ||||| ||||||||||||||||    
T  14193643 ggcaacctcccaaatgaatcacctcccacaaaacacccgtctcctc 14193598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 37 - 373
Target Start/End: Original strand, 14755205 - 14755543
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgat-ccaaagaactgactcccgat 135  Q
    |||||||||||| ||||||||| || ||| |||| |||  | |||||||||| ||||||||||||||  ||| || ||  ||||||||||||||||||||    
T  14755205 aaagatcattcaacttccaccatctctcgacctccgatccatcgaaagaaacaataaaaagcccaaatccaacctcgaaaccaaagaactgactcccgat 14755304  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    || |||||||||||||||||||||||||||||||| || |||  | ||||||||||| |||    |||||||||||||||||||||| | ||  ||||||    
T  14755305 cttgaatcaaaagtgatcggcccaccagactttagcacaaaa--aaaagggcacccctcaccttcggtacaccagagaaacaccaaaacgcgcgaaacaa 14755402  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggt 331  Q
     || ||||||||| |||||||||||||||| |||||||| ||||||||||| ||  || |||||||||||||| |||  | ||| |||  ||||| || |    
T  14755403 gattgcagctagataccgactcccgatctcgaagcaaaagtaaccggcccatcggaaatcagcacacaaaaagaatg--gcaaatgacatgatatgcgat 14755500  T
Q  332 agtgcaaacaacaaacagatcataa-gaaaatactcatttcaa 373  Q
    |||||||||||| |||| |||| || || || |||||||||||    
T  14755501 agtgcaaacaacgaacaaatcaaaaggagaagactcatttcaa 14755543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 37 - 191
Target Start/End: Complemental strand, 14879576 - 14879421
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgat 135  Q
    |||||||||| |||||||||||||| ||| ||||  ||  ||||||||||||||||||||| |||||| |||| |||||||||| |||| ||||||||||    
T  14879576 aaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaaccaaaacttgatccaacgaacagactcccgat 14879477  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14879476 ctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 93 - 306
Target Start/End: Complemental strand, 19176586 - 19176369
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||     
T  19176586 aaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccct 19176487  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      | | ||||||| |||||||| ||||||| | |||||||||| || |||||||||| |||||||| |||||| |||| |||  |||| ||||||||  |    
T  19176486 cactcccggtacatcagagaaaaaccaaattaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaa 19176387  T
Q  289 accagcacacaaaaagta 306  Q
    |||||||||||| |||||    
T  19176386 accagcacacaataagta 19176369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 93 - 300
Target Start/End: Original strand, 23328347 - 23328555
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||| ||||| | ||||||| ||||| | || ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||  |||||||||     
T  23328347 aaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccc 23328446  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
       ||| ||||||||||||| ||||||| |||| |||||||||||| ||||||||||||| |||||||||||| ||||||||  |||||||||| ||       
T  23328447 tcgcccccggtacaccagag-aacaccatatcaagtcaaacaaaattgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggac 23328543  T
Q  289 accagcacacaa 300  Q
    ||||||||||||    
T  23328544 accagcacacaa 23328555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 94 - 315
Target Start/End: Complemental strand, 20611866 - 20611640
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||| ||||||||||| || ||| ||| || |||| || |||||||||      
T  20611866 aaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccct 20611767  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||| |||||| || | |||| ||||| |||||||  |    
T  20611766 cgcccccggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaa 20611667  T
Q  289 accagcacacaaaaagtatgacgaaaa 315  Q
    |||||||||||| | ||| ||||||||    
T  20611666 accagcacacaatatgtaagacgaaaa 20611640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 36 - 284
Target Start/End: Original strand, 823374 - 823627
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccga 134  Q
    ||||||||||||||||||| |||||| ||  |||||| | ||||||||||| |||| || ||||||||||  ||||||||   ||| ||||||||| |||    
T  823374 aaaagatcattcagcttccgccacctctcaacctctggtctaccgaaagaacaccaaaataagcccaaaacaaaacttgaatgaaacaactgactctcga 823473  T
Q  135 tctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaaca 230  Q
    |||||||||||||||||||||||||  || ||| |  |||||||  |||||||||||    |||||||| |||||||||||||||| | || | ||||||    
T  823474 tctcgaatcaaaagtgatcggcccattagtcttcataaccaaatttgaagggcaccctttacccacggtccaccagagaaacaccataacaagccaaaca 823573  T
Q  231 aaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    | || ||| ||||||||| ||||| |||||  |||||||||||||||| |||||    
T  823574 agattgcaactagacaccaactcctgatcttgaagcaaaattaaccggtccacc 823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 33143891 - 33144020
Alignment:
Q  39 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatct 137  Q
    |||||| ||||||||||||||||  || ||||||||  |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  33143891 agatcaatcagcttccaccacctcgcgacctctgatccaccgaaagaaaccataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatct 33143990  T
Q  138 cgaatcaaaagtgatcggcccaccagactt 167  Q
    |||||||||||||||||  |||||||||||    
T  33143991 cgaatcaaaagtgatcgatccaccagactt 33144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 157 - 353
Target Start/End: Original strand, 4463997 - 4464196
Alignment:
Q  157 ccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgact 252  Q
    ||||||||||||| | |||||||||||||||||||| |||    ||||||| ||||||||||||||||||| || |||| || ||| |||||||||||||    
T  4463997 ccaccagactttaaggccaaatcagaagggcacccctcaccctcggtacac-agagaaacaccaaatcacgccacacaagattgcaactagacaccgact 4464095  T
Q  253 cccgatctcaaagcaaaattaaccggcccaccg-ctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagat 351  Q
    ||||||||| |||||||| ||||||||||||||   ||||| ||||||||||| ||||| ||||||||  ||||  |||| ||||||||||||||| |||    
T  4464096 cccgatctcgaagcaaaagtaaccggcccaccgaaaaaccaacacacaaaaaggatgac-aaaacgacaagataagcggtggtgcaaacaacaaaccgat 4464194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 125 - 298
Target Start/End: Original strand, 34475783 - 34475961
Alignment:
Q  125 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatc 220  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||| || |||||||||    ||| |||||||||||||||| | |||| |    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgcccccggtacaccagagaaaaatcaaacc 34475882  T
Q  221 acgtcaaac-aaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacac 298  Q
    | ||||||| ||||| |||||||||| ||||||||||||||| |||| |||| || ||||||| ||  |||||||||||    
T  34475883 aagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccagcacac 34475961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 2392504 - 2392729
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | ||||| |  ||||||||||||| || |||||||||||||||||||||| ||||||| || ||| ||||||| || |||||||||      
T  2392504 aaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccct 2392603  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| ||||||||||||| || |||||| || |||||||||| || |||||||||| ||||||||||||||  |||| |||| ||||| |||| ||  |    
T  2392604 cgcccccggtacaccagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaa 2392703  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  2392704 accagcacacaatatgtaagacgaaa 2392729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 22 - 285
Target Start/End: Original strand, 40023496 - 40023764
Alignment:
Q  22 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataa--aaagcccaaaatcaaacttgatccaa 119  Q
    |||| ||| ||||| || || ||| |||||||||| ||||  |||||||||||  |||||||||   || ||  ||||||||||| | ||||| | ||||    
T  40023496 aaaagctcctaaccgaatgaacatgcagcttccacaacctcccgtcctctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaa 40023595  T
Q  120 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc---cccacggtacaccagagaaacacca 216  Q
    ||||  |||||||||||||||||||||||||||||| |||||||||||||  || ||||||| |||||||||   ||| |||||||| |||| |||||||    
T  40023596 agaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggcaccctcgcccccggtacactagag-aacacca 40023694  T
Q  217 aatcacgtc-aaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccg 285  Q
     |||| ||| |||||  || ||||||||||||| ||| |||||||| |||||||| ||||||| ||||||    
T  40023695 tatcaagtcaaaacatgattgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccg 40023764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 47945806 - 47945691
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 175  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  47945806 accgaaagaacaccataaaa-gcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggaccc 47945708  T
Q  176 aatcagaagggcacccc 192  Q
    || |||| |||||||||    
T  47945707 aaccagacgggcacccc 47945691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 117 - 314
Target Start/End: Original strand, 2394274 - 2394476
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaac 212  Q
    ||||||||||||| || |||||||||||||||||||||| ||||||| || ||| ||||||| || |||||||||    ||| ||||||||||||| ||     
T  2394274 caaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccctcgcccccggtacaccagagtaaa 2394373  T
Q  213 accaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacg 311  Q
    |||||| || |||||||||| || |||||||||| ||||||||||||||  |||| |||| ||||| |||| ||  ||||||||||||| | ||| ||||    
T  2394374 accaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaatatgtaagacg 2394473  T
Q  312 aaa 314  Q
    |||    
T  2394474 aaa 2394476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 1652882 - 1652975
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 185  Q
    ||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  1652882 aaaaagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcagaagg 1652975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 39021217 - 39021342
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||| |||||| |||||| || ||| |||| |||  ||| |||||| | |||||| |||||||| || ||||||||||||||||||||||||||     
T  39021217 aaaagatcaatcagctaccaccatctctcgacctccgatccaccaaaagaatctataaaa-gcccaaaaccagacttgatccaaagaactgactcccgac 39021315  T
Q  136 ctcgaatcaaaagtgatcggcccacca 162  Q
    |||||||||||||||||||||||||||    
T  39021316 ctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 5556655 - 5556555
Alignment:
Q  93 aaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||  | |||||||||| ||||||||||    
T  5556655 aaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcaccc 5556556  T
Q  192 c 192  Q
    |    
T  5556555 c 5556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 37 - 275
Target Start/End: Complemental strand, 27399099 - 27398856
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||||||||  ||||||||| ||  |||||| |  ||| |||||| |||| ||||||||||||| ||||||||| ||||| |||||||||| ||     
T  27399099 aaagatcattcagcaaccaccacctctcaacctctggtccaccaaaagaacaccaaaaaaagcccaaaaccaaacttgaaccaaataactgactcctgac 27399000  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    |||||||| |||| ||| |  |||||||||||| ||||||||  ||||||||||||    | |  ||| ||| |||||||||||| | |  | |||||||    
T  27398999 ctcgaatctaaagcgattgtgccaccagactttcggaccaaaatagaagggcacccatctcgcctggtccactagagaaacaccatagccagccaaacaa 27398900  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaac 275  Q
     || | ||||||||||  |||||||||||| |||||||| ||||    
T  27398899 gattgtagctagacacaaactcccgatctcgaagcaaaaataac 27398856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 43012459 - 43012374
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 178  Q
    |||||| ||||| | |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  43012459 aaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaat 43012374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 17551040 - 17550968
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17551040 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 17550968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 9584050 - 9584148
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    |||||||||||| | | |||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||| || |||||||||    
T  9584050 aaaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccc 9584148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 30935386 - 30935512
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||| ||||| ||||||||| ||||| |||| ||||||||||| |||||||||| |||| |||||||| |||| |  ||||||||||||||||||||    
T  30935386 aaaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccc 30935485  T
Q  192 ----cccacggtacaccagagaaacac 214  Q
        ||| |||| ||||||||||||||    
T  30935486 cttacccccggtccaccagagaaacac 30935512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 45398880 - 45398781
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||||||||||| | ||||| |  |||||| ||||||| |||||||||||||||||||||||| |||||||||||||   ||||||||| ||||||||||    
T  45398880 aaaagcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccc 45398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 25594516 - 25594616
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||||||||  ||| ||||| |||||||| | ||| ||||||| |||||||||| ||||  |||||||||||| |||||||||  ||||||||||||    
T  25594516 aaaaagcccaaagccaatcttgaaccaaagaattaacttccgatctagaatcaaaagcgatctacccaccagacttgaggaccaaaatagaagggcaccc 25594615  T
Q  192 c 192  Q
    |    
T  25594616 c 25594616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 45163938 - 45163707
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcc--caccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||||||| | ||||| |  |||| |||||||| | |||||||||||||||||||||||||  ||| ||||| ||| ||||||| || |||||||||    
T  45163938 aaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcaccc 45163839  T
Q  192 ----cccacggta----caccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggccca 282  Q
        ||| |||||    ||| ||||||| | |||| || |||||||||| || |||||||||| |||||| |||||||  |||| |||| |||||||| |    
T  45163838 ctcgccctcggtacatgcactagagaaaaatcaaaccaagtcaaacaaagattgcagctagaccccgacttccgatcttgaagccaaatgaaccggccta 45163739  T
Q  283 ccgctaaccagcacacaaaaagtatgacgaaa 314  Q
     |   ||||||||||||| | ||| |||||||    
T  45163738 tcaaaaaccagcacacaatatgtaagacgaaa 45163707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 196 - 299
Target Start/End: Complemental strand, 47235693 - 47235589
Alignment:
Q  196 cggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagc 294  Q
    ||||||||  |||||| |||||| || |||||||||| || |||||||||| | ||||||||||||| |||| |||| |||||||||| ||  |||||||    
T  47235693 cggtacactggagaaaaaccaaaccaagtcaaacaaagattgcagctagaccctgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagc 47235594  T
Q  295 acaca 299  Q
    |||||    
T  47235593 acaca 47235589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 20710740 - 20710779
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 20710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 24099347 - 24099397
Alignment:
Q  116 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  24099347 ccaaaaaactgattcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 30127319 - 30127273
Alignment:
Q  120 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  30127319 agaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 31482932 - 31482869
Alignment:
Q  129 tcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||||||||||||||||||||| |||| ||||||| ||| ||||||| || |||| |||||    
T  31482932 tcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtagggtacccc 31482869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 28937659 - 28937721
Alignment:
Q  41 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaa 103  Q
    |||||||||||||||||| || | | |||| |||  |||||||||||||||||||||||||||    
T  28937659 atcattcagcttccaccatctcttgacctccgatccaccgaaagaaaccataaaaagcccaaa 28937721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 31424296 - 31424247
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||| |||||||||||||||||||||||||| || ||||| ||||||||    
T  31424296 caaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagact 31424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 34476047 - 34476117
Alignment:
Q  387 ctccaaactccctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacgaccaaggaccc 457  Q
    ||||||||||| ||||||||| ||| |||| |||||||||| ||| |||| | |||||||| || ||||||    
T  34476047 ctccaaactccgtaaacacctaaaccactcaaaaagcacaaacaagagctagagacgacgaacatggaccc 34476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 2782090 - 2782139
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||| ||||| ||||||||||  ||||||||||||||| |||||||||||    
T  2782090 caaaaaactggctcccgatctaaaatcaaaagtgatcgtcccaccagact 2782139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 19295891 - 19295935
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||| ||| ||||| |||||||||||||||| |||||||||||||    
T  19295891 aactaacttccgatatcgaatcaaaagtgataggcccaccagact 19295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 1e-85; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 37 - 306
Target Start/End: Complemental strand, 25753312 - 25753039
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||||  ||||||| |||| |||  |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  25753312 aaagatcattcagcttccactgcctatcgacctccgatccaccgaaagaaacaataaaaagcccaaaatcaaacttgagccaaagaactgactcccgatc 25753213  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| |||||| || ||    ||||||||||||||||||||| |||||| |||||||     
T  25753212 tcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacctccggtacaccagagaaacaccacatcacgccaaacaag 25753113  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagta 306  Q
    || |||||||||||||||||||||||||| |||||||||||| | ||||| ||  |||||||| ||||||||||    
T  25753112 attgcagctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaaccagcaaacaaaaagta 25753039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 36 - 284
Target Start/End: Original strand, 53823361 - 53823613
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||||| ||| |||||||||||| ||| |||  |||  |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  53823361 aaaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaaaccataaaaaacccaaaaccaaacttgagccaaagaactgactcccgat 53823460  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||||||||| ||    |||||||||||||||||||||| ||| | ||| |||    
T  53823461 ctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctccggtacaccagagaaacaccaagtcaagccaagcaa 53823560  T
Q  232 aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
     || |||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  53823561 gattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccacc 53823613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 2 - 414
Target Start/End: Original strand, 22811067 - 22811481
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    ||||| |||||||| |||| |||| ||| |||||| ||||   |||| |||||||||||| ||  ||||  ||  | ||| ||||||||||||||||| |    
T  22811067 caaagctgagccacatccgcaaaa-ctcctaaccagaagacatttcaacttccaccacctctcaacctccaatccatcgagagaaaccataaaaagccta 22811165  T
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacgg 198  Q
    ||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||   || ||     
T  22811166 aaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcagaagggcactcctcaccccga 22811265  T
Q  199 tacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacac 298  Q
    ||||||||||||||||||||||||  |||||||||| ||| ||||||||| | | |||||||| |||||||| |||||| |||||||  |||||||||||    
T  22811266 tacaccagagaaacaccaaatcacaccaaacaaaattgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacac 22811365  T
Q  299 -aaaaagtatgacgaaaacgactcgatatacggtagtgcaaac-aacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaact 395  Q
     |||||| |||||  |||||||   |||| ||||||||||||| || ||||| |||| || |||||  || |  ||||| |||||||||  |||||||||    
T  22811366 aaaaaagaatgac--aaacgac-atatatgcggtagtgcaaacaaaaaaacatatcaaaaggaaaaggcttagatcaacgggacccgcttcctccaaact 22811462  T
Q  396 ccctaaacaccttaacaac 414  Q
    |||||||||||||||||||    
T  22811463 ccctaaacaccttaacaac 22811481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 269
Target Start/End: Original strand, 39420958 - 39421190
Alignment:
Q  41 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcga 140  Q
    |||| |||| ||||||||||| |||  ||| |||  ||||||| |||||||||||||||||||| ||||  ||||| || ||| ||||||||||||||||    
T  39420958 atcaatcagtttccaccacctctcgatctccgatccaccgaaaaaaaccataaaaagcccaaaaccaaaactgatctaaggaattgactcccgatctcga 39421057  T
Q  141 atcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatag 236  Q
    ||||||||||||||||||||||| || || ||||| |||||||||||||||    ||| | |||||  ||||||||||||||||||| ||||||| || |    
T  39421058 atcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaaatcacgccaaacaagattg 39421157  T
Q  237 cagctagacaccgactcccgatctcaaagcaaa 269  Q
    |||||||||||||| |||||||||| |||||||    
T  39421158 cagctagacaccgattcccgatctcgaagcaaa 39421190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 98 - 314
Target Start/End: Complemental strand, 30964520 - 30964299
Alignment:
Q  98 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cc 193  Q
    ||||||| | |||||||  |||||||| ||||||||||| |||||||||||||||||||||| |||| | ||| ||||||| || |||||||||    ||    
T  30964520 cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccctcgcc 30964421  T
Q  194 cacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaacca 292  Q
    | |||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||| |||||||| |||| |||| |||||||||| ||  |||||    
T  30964420 ctcggtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaacca 30964321  T
Q  293 gcacacaaaaagtatgacgaaa 314  Q
    |||||||| ||||| |||||||    
T  30964320 gcacacaataagtaagacgaaa 30964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 2061679 - 2061834
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    |||||||||||| |||||||||||| ||| |||| |||  ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||| | |||    
T  2061679 aaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaatc 2061778  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||    
T  2061779 tcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccc 2061834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 8255110 - 8254885
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  ||||||||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||| || |||||||||      
T  8255110 aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccct 8255011  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| || ||||||| ||  |||||||||  |||||||||||||| |||| |||  |||||||||||||  |    
T  8255010 cgcccccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaa 8254911  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||| ||||||| | ||| |||||||    
T  8254910 accaacacacaatatgtaagacgaaa 8254885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 8268528 - 8268303
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  ||||||||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||| || |||||||||      
T  8268528 aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccct 8268429  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| ||||||||| || ||||||| ||  |||||||||  |||||||||||||| |||| |||  |||||||||||||  |    
T  8268428 cgcccccggtacaccagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaa 8268329  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||| ||||||| | ||| |||||||    
T  8268328 accaacacacaatatgtaagacgaaa 8268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 285
Target Start/End: Original strand, 31050659 - 31050854
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | ||||  | ||||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||     
T  31050659 aaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccc 31050758  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccg 285  Q
       ||| ||||||| || || ||||||| |||| ||||||||  || |||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  31050759 tcgcccccggtacatcaaag-aacaccatatcaagtcaaacaggattgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccg 31050854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 48098507 - 48098284
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    |||||||||||||| ||||||||  ||| || |  ||||||| |||| |||||||||||| ||| |||  |||  | |||||||||| ||||||||||||    
T  48098507 caaagttgagccacatccgaaaag-ctcctatctgaaagatcgttcatcttccaccacctctcgaccttcgatccatcgaaagaaactataaaaagccca 48098409  T
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac----cccccacg 197  Q
    ||| ||||||| ||||||  |||||||||||||||||||| |||||||||| |||||| | | ||||| |||||||||||||||||||    | ||| ||    
T  48098408 aaaccaaacttaatccaacaaactgactcccgatctcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacctctcaccctcg 48098309  T
Q  198 gtacaccagagaaacaccaaatcac 222  Q
    ||||||| |||||||||||||||||    
T  48098308 gtacacctgagaaacaccaaatcac 48098284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 107 - 285
Target Start/End: Original strand, 19815235 - 19815417
Alignment:
Q  107 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtaca 202  Q
    |||||||| |||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||||| |||||||||||||    ||| ||||  |    
T  19815235 aaacttgagccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccctcacccccggtcaa 19815334  T
Q  203 ccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccg 285  Q
    ||||| ||| || | |||| | ||||||| || |||||||||||||||||| ||||||| |||||||| |||| |||||||||    
T  19815335 ccagaaaaatacaatatcaagccaaacaagattgcagctagacaccgactctcgatctcgaagcaaaagtaactggcccaccg 19815417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 94 - 300
Target Start/End: Complemental strand, 4305808 - 4305597
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc--- 190  Q
    |||||| |||| | |||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||| || ||||||||       
T  4305808 aaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcaccgct 4305709  T
Q  191 -ccccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| || |||||  |||||||||| || ||| |||| | ||||||||||||||| |||| |||| |||||||||||||  |    
T  4305708 tgcccccggtacaccagagaaaaacgaaatccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagccaaatgaaccggcccaccgaaa 4305609  T
Q  289 accagcacacaa 300  Q
    ||||| ||||||    
T  4305608 accagtacacaa 4305597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 34 - 283
Target Start/End: Complemental strand, 19673243 - 19672991
Alignment:
Q  34 ccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactccc 132  Q
    |||||| |||||| ||||||||||| |||||| ||   |||  |||||||||| ||||  |||| |||||||  |||||||| ||||||||||||||||     
T  19673243 ccaaaatatcatttagcttccaccatctatcgaccgtcgatccaccgaaagaacaccaacaaaa-cccaaaactaaacttgagccaaagaactgactcct 19673145  T
Q  133 gatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaa 228  Q
    |||||||||| ||||| ||  || ||||||||||||||||||||| |||||||||||||    ||| || |  |||||||||| | || |||| | ||||    
T  19673144 gatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcacccccgatcaaccagagaaatatcatatcaagccaaa 19673046  T
Q  229 caaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccac 283  Q
    ||| || |||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  19673045 caagattgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccac 19672991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 49747624 - 49747478
Alignment:
Q  80 gaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatc 179  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  49747624 gaaagaacccataaaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatc 49747525  T
Q  180 agaagggcacc---ccccacggtacaccagagaaacaccaaatcacg 223  Q
    | |||||| ||   | ||  |||||| ||||||||||||||||||||    
T  49747524 aaaagggcgccattcaccctggtacatcagagaaacaccaaatcacg 49747478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 38637174 - 38637302
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||||||||| ||| |||| |||  ||| |||||||||||||||||||||||| |  |||| | |||||||| ||||||||||||    
T  38637174 aaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaa-cctacttaagccaaagaattgactcccgatc 38637272  T
Q  137 tcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||| |||||||    
T  38637273 tcgaatcaaaagtgatcggcccgccagact 38637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 41117908 - 41118037
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||||||||| ||| ||||||||  | |||||||||||||||||||||||||| | || |||| |||||||||| ||| ||||||    
T  41117908 aaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaaaccataaaaagcccaaaacctaatttgagccaaagaacttacttccgatc 41118007  T
Q  137 tcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||  ||| |||||||    
T  41118008 tcgaatcaaaagtgatcttccctccagact 41118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 92 - 284
Target Start/End: Complemental strand, 16501816 - 16501622
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac-- 189  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||| ||||| |||      
T  16501816 aaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggatcaaatcggaaggccacca 16501717  T
Q  190 cccccacggtacaccagagaaacaccaaatcacgtc-aaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    | ||| |||  |||||||||||||||||| |  ||| ||||||||| ||||  |||||||  ||||||||||| |||||||| ||| |||||||||    
T  16501716 cacccccggaccaccagagaaacaccaaagccagtcaaaacaaaattgcagtaagacaccagctcccgatctcgaagcaaaa-taatcggcccacc 16501622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 76 - 283
Target Start/End: Original strand, 46698764 - 46698976
Alignment:
Q  76 taccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 174  Q
    |||||||||||  | |||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||    
T  46698764 taccgaaagaacacctaaacagcccaaaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggacc 46698863  T
Q  175 aaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaa 270  Q
    |||||||||||||||||    ||| |||| ||||| |||||| |   | |    ||||||| |  ||||||||||||| |||||||||||| ||||||||    
T  46698864 aaatcagaagggcaccccacaccctcggtccaccaaagaaactctgtagcttaccaaacaagactgcagctagacaccaactcccgatctcgaagcaaaa 46698963  T
Q  271 ttaaccggcccac 283  Q
     ||| ||||||||    
T  46698964 gtaatcggcccac 46698976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 38929927 - 38929812
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 175  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||     
T  38929927 accgaaagaacaccataaaa-gcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggaccc 38929829  T
Q  176 aatcagaagggcacccc 192  Q
    || |||| |||||||||    
T  38929828 aaccagacgggcacccc 38929812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 93 - 285
Target Start/End: Complemental strand, 2825867 - 2825672
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | |  |||| |||||||  ||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||| || ||||||     
T  2825867 aaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccc 2825768  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccg 285  Q
       ||| ||||||||||||| ||||||| |||| ||||||||  || ||||||||||||| |||| | ||||| |||||||  ||| ||||||||||    
T  2825767 tcgccctcggtacaccagag-aacaccatatcaagtcaaacatgattgcagctagacaccaactctcaatctcgaagcaaatataatcggcccaccg 2825672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 12296260 - 12296160
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||||||||||||||||||| ||||||||||||||   |||||||||||||||| | ||||| |||||||||| ||||||||| |||| ||||||||    
T  12296260 aaaaagcccaaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagacttcaggaccaaaccagaggggcaccc 12296161  T
Q  192 c 192  Q
    |    
T  12296160 c 12296160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 35800574 - 35800476
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||| ||||||  |||||||||| || |||||||||||||||||||    
T  35800574 aaaaagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcacc 35800476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 16832928 - 16833078
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    |||||||||||||| ||||||||  ||| || || ||||||||||||||||| | ||||| | | | || ||   || ||||||||||||||||||||||    
T  16832928 caaagttgagccacatccgaaaag-ctcatatcccaaagatcattcagcttcaatcacctcttgacttccgaaccactgaaagaaaccataaaaagccca 16833026  T
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatc 153  Q
    ||  ||||||||||||||  || ||||| |||||||||||||||||||||||    
T  16833027 aatccaaacttgatccaacaaaatgacttccgatctcgaatcaaaagtgatc 16833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 280
Target Start/End: Original strand, 6599936 - 6600134
Alignment:
Q  87 accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 186  Q
    |||||||| |||||||||  ||||||||  |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||  ||||||||| | ||    
T  6599936 accataaatagcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagactctagagccaaatcagtaagg 6600035  T
Q  187 cacccccca----cggtacaccagagaa-acaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcc 280  Q
      | || ||    || | ||||  |||| |||||| | |  | ||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||    
T  6600036 tcctcctcacgctcgatccaccgaagaagacaccataactagccaaacaagattgcaactagacaccaactcccgatctcaaagcaaaattaaccggcc 6600134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 28966951 - 28966870
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 174  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||  ||||| || ||||||||| ||||||    
T  28966951 aaaagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagacttcaggacc 28966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 19311351 - 19311437
Alignment:
Q  104 atcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |||  |||||||||||||| ||||||    
T  19311351 atcaaacatgatccaaataactgactcccg-tctcgaatcaaaagtgatcgacccaccagac-ttaaaaccaaatcagaaggacacccc 19311437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 21387227 - 21387294
Alignment:
Q  119 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 186  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||  || |||||||||||||||    
T  21387227 aagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaatcagaaggg 21387294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 38639525 - 38639627
Alignment:
Q  209 aaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta-accagcacacaaaaagtat 307  Q
    ||||||||||||||  ||||||| || | |||||| ||||| ||||||||||| |||||||| ||||||||||||||    |||||||||||| ||||||    
T  38639525 aaacaccaaatcacaccaaacaatattgtagctaggcaccggctcccgatctcgaagcaaaactaaccggcccaccggagtaccagcacacaataagtat 38639624  T
Q  308 gac 310  Q
    |||    
T  38639625 gac 38639627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 24740103 - 24740226
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac--cccc 193  Q
    ||||||||| |||| |||| ||||| |||||||||||||||| |||| | ||| |||||||||||||||| |  ||||||| ||||| || |||  | ||    
T  24740103 agcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattataagcgatcggcccaccagacatcgggaccaactcagagggccacttcacc 24740202  T
Q  194 cacggtacaccagagaaacaccaa 217  Q
    | |||| ||||| |||||||||||    
T  24740203 ctcggtccaccaaagaaacaccaa 24740226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 39041300 - 39041344
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  39041300 aactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 261
Target Start/End: Original strand, 30167576 - 30167733
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacggtacacc 204  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||| |||||  |||| ||  |||||||  | ||||||||||   || ||| ||| |    
T  30167576 aacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccacttgactataataccaaataggcagggcacccctcaccccggcacatc 30167675  T
Q  205 agagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctc 261  Q
    | |||||  | ||||||  ||||||||| || | |||||||| |||||||||||||||    
T  30167676 aaagaaaacctaaatcaaatcaaacaaagattgtagctagaccccgactcccgatctc 30167733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 49528212 - 49528145
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaa 104  Q
    |||||||||||| ||||||||||||  || |||| |||  ||||||||||||||||||||||||||||    
T  49528212 aaagatcattcatcttccaccacctcccgacctccgatccaccgaaagaaaccataaaaagcccaaaa 49528145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 40813813 - 40813851
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 36962622 - 36962685
Alignment:
Q  102 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||| |||||||  |||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  36962622 aaatccaacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 53756802 - 53756766
Alignment:
Q  131 ccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    |||||||||||||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagactt 53756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 37707392 - 37707425
Alignment:
Q  133 gatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagact 37707425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 2792300 - 2792344
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||| ||||||||||||||||||||||||||| || |||||    
T  2792300 aactgacttccgatctcgaatcaaaagtgatcggcctactagact 2792344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 19311299 - 19311339
Alignment:
Q  21 aaaaaactcttaaccaaaagatcattcagcttccaccacct 61  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  19311299 aaaaagctcttaaccaaaagatcatacagcttccaccacct 19311339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 26474891 - 26474851
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccacca 162  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  26474891 aactaactctcgatctcgaatcaaaagtgatcggcccacca 26474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 10388610 - 10388572
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  10388610 ctcccgacctcgaatcaaaagtgatcggcccacaagact 10388572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 21988063 - 21988133
Alignment:
Q  236 gcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagta 306  Q
    ||||||||||||| ||||| |||||| || ||||| |||||||||||||   |  ||||||||||||||||    
T  21988063 gcagctagacaccaactcctgatctcgaaacaaaagtaaccggcccaccagaattcagcacacaaaaagta 21988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 12296098 - 12296061
Alignment:
Q  127 actcccgatctcgaatcaaaagtgatcggcccaccaga 164  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  12296098 actcccgatctcgaagcaaaagtaatcggcccaccaga 12296061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 12296112 - 12296048
Alignment:
Q  236 gcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    |||||||||| || |||||||||||| |||||||| ||| |||||||||   | |||||||||||    
T  12296112 gcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccaccagaatccagcacacaa 12296048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 17416541 - 17416573
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccac 160  Q
    |||| ||||||||||||||||||||||||||||    
T  17416541 ctcctgatctcgaatcaaaagtgatcggcccac 17416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 38929753 - 38929701
Alignment:
Q  254 ccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagta 306  Q
    |||||||| |||||||| |||||||||||||   | |||||||||||||||||    
T  38929753 ccgatctcgaagcaaaagtaaccggcccaccagaatccagcacacaaaaagta 38929701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 43077066 - 43076996
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaa---ctgactcccgatctcgaatcaaaagtgatcggccca 159  Q
    ||||||||||||| ||||||||| ||||||||    |||||| ||||||||||| ||||  ||||||||||    
T  43077066 aaaaagcccaaaagcaaacttgaaccaaagaaaagttgactctcgatctcgaataaaaaacgatcggccca 43076996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 36 - 348
Target Start/End: Complemental strand, 19524 - 19209
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||| ||||||||||||||| || ||| |||| |||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  19524 aaaagattattcagcttccaccaactctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagaactgacttccgat 19425  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaacaccaaatcacgtc-aaaca 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    |||| |||||||||||| ||||| | | | |||||    
T  19424 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcacctttggtataccagagaaacatcaaattaagccaaaaca 19325  T
Q  231 aaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacgg 330  Q
    | |  |||||||||||||||||||||||||| ||||||||||||||| |||| ||  |||||||| ||||| |||| |||  |||||||  |||| | ||    
T  19324 agaatgcagctagacaccgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagac--aaacgacatgatagatgg 19227  T
Q  331 tagtgcaaacaacaaaca 348  Q
    | ||||||||||||||||    
T  19226 tggtgcaaacaacaaaca 19209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 22 - 512
Target Start/End: Complemental strand, 36864 - 36364
Alignment:
Q  22 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaac--ttgatccaa 119  Q
    |||| ||| ||||| ||||| |||||| |||||||||| | ||| |||| |||  ||||||||||| ||||||||| |||||| ||||   ||||  |||    
T  36864 aaaagctcctaaccgaaagaccattcaacttccaccacatctcgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaa 36765  T
Q  120 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaacacc 215  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||    
T  36764 agaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccctcactctcggtacaccagagaaacacc 36665  T
Q  216 aaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaa-gtatgacgaaa 314  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| || ||||||||| ||||||||||  ||||| |||||||||| | |||||  ||    
T  36664 aaatcacgccaaacaaaattgcagctagacaccgactcctgatctcgaatcaaaattaatcggcccaccggaaaccaacacacaaaaaagaatgac--aa 36567  T
Q  315 acgactcgatatacggtagtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccct-aaacaccttaaca 412  Q
    | |||  ||||| |||| |||||||||||||||| |||| || |||||  | ||  |||||  || |||||  ||| |||| |||| |||||||||||||    
T  36566 atgacatgatatgcggtggtgcaaacaacaaacatatcaaaaggaaaagtcacagctcaacgagatccgcttcctctaaacaccctaaaacaccttaaca 36467  T
Q  413 actccaaaagcac--aatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatc-cccacgaaacacccgtctc 509  Q
    || ||||||  ||   | ||| ||||  ||||||||| ||||||||| | ||||| ||| | ||||| |||||||||| | ||||| ||||||| | |||    
T  36466 accccaaaaaaacgtgaacaagagctactgacgacgaacaaggacccgagtaacagaggcaacctcccaaagaaatcaccacccacaaaacacctgcctc 36367  T
Q  510 ctc 512  Q
    |||    
T  36366 ctc 36364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 3e-77; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 21 - 512
Target Start/End: Original strand, 41086722 - 41087206
Alignment:
Q  21 aaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaa 120  Q
    ||||| |||||| || ||||||||||||||||||||||||| ||| |||| |||  |||||||| ||||||||||||||||||| ||||||  |||||||    
T  41086722 aaaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaaggaaccataaaaagcccaaaaccaaact--atccaaa 41086819  T
Q  121 gaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc---cccacggtacaccagagaaacaccaa 217  Q
    || ||||       |||||||||||||||||| | ||||||||||| || |||||||||||||||||||||   |||  |||||||||||||| ||||||    
T  41086820 gagctga-------tctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggcaccctcacccctggtacaccagagaa-caccaa 41086911  T
Q  218 atcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacg 317  Q
    |||||| |||||||||| | |||| |||||||| ||||||||||||||||||| ||| ||| ||||||  |||| |||||||| ||||| |||  |||||    
T  41086912 atcacgccaaacaaaattgtagctggacaccgattcccgatctcaaagcaaaagtaatcggtccaccggaaacctgcacacaacaagtaggac--aaacg 41087009  T
Q  318 actcgatatacggtagtgcaaacaacaaacagatca-taagaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactc 416  Q
    ||  ||||  ||||||||||| |||||||||||||| || |||||  || |  ||||| |||||||||  |||||||| ||||| ||||||||||||| |    
T  41087010 acaagataagcggtagtgcaagcaacaaacagatcaataggaaaaggcttagctcaacgggacccgctacctccaaacaccctagacaccttaacaaccc 41087109  T
Q  417 caaaag-cacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacgaaacacccgtctcctc 512  Q
    |||||  | ||  ||| |||| || |||||||  |||||||| | ||||| |||  | ||||||||||||||| |||||  ||||||||| ||||||    
T  41087110 caaaaaacgcatacaagagctagtaacgacgaataaggacccgagtaacagaggctgactccaaaagaaatcacccccaacaaacacccgcctcctc 41087206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 37 - 512
Target Start/End: Original strand, 37770583 - 37771063
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||| ||||| ||| |||| |||  ||||||||||||||||||| |||||||| |||| |||||| |||||| ||||||| ||||    
T  37770583 aaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaaaccataaaa-gcccaaaaccaaaattgatctaaagaattgactcctgatc 37770681  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
      |||||||||||||||||||||||| || |||||||||||||||| ||||||||    ||| ||||||||||||||||||| ||||| || ||||   |    
T  37770682 cagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcaccctcggtacaccagagaaacactaaatcgcgccaaatcga 37770781  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggta 332  Q
    || || |||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||| |||||||| |||||  |||||||  ||||||||||     
T  37770782 attgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccgataaccagcaaacaaaaagcatgac--aaacgacaagatatacggtg 37770879  T
Q  333 gtgcaaacaacaaacagatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccct-aaacaccttaacaactcc--aaaagcacaat 428  Q
    ||||||||||| || | |||| || ||| |  ||||   ||||| |||||  |  |||||||| |||| ||||||||||||||| ||  |||| | |||     
T  37770880 gtgcaaacaacgaataaatcaaaaggaagaagctcaacacaacatgacccatttcctccaaacaccctaaaacaccttaacaaccccaaaaaaacgcaaa 37770979  T
Q  429 caacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacgaaacacccgtctcctc 512  Q
    ||| |||| |||||||||| ||||||||| | | | | ||| ||||||||| |||||||| || ||  ||||||||| ||||||    
T  37770980 caaaagctagtgacgacgaacaaggacccgagttatagaggcagcctccaacagaaatcaccctcaacaaacacccgcctcctc 37771063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 36 - 512
Target Start/End: Complemental strand, 1269624 - 1269143
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||| ||||||||||||||| || ||| |||| |||  || ||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  1269624 aaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgat 1269525  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaacaccaaatcacgtc-aaaca 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    |||| |||||||||||| ||||| | | | |||||    
T  1269524 ctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtataccagagaaacatcaaattaagccaaaaca 1269425  T
Q  231 aaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacgg 330  Q
    | |  ||||||||||| |||||||||||||| ||||||||||||||| |||| ||  |||||||| ||||| |||| |||  |||||||  |||| | ||    
T  1269424 agaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagac--aaacgacatgatagatgg 1269327  T
Q  331 tagtgcaaacaacaaacagat-cataagaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatc 429  Q
    | |||||||||||||||| || || | |||||  || |  ||||   || | |||  |||||||| || ||||||| |||||||| |||||| | ||| |    
T  1269326 tggtgcaaacaacaaacatatccaaaggaaaaggcttagctcaatgagatcggctccctccaaacaccataaacactttaacaaccccaaaaacgcaaac 1269227  T
Q  430 aacagctggtgacgacg-accaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacgaaacacccgtctcctc 512  Q
    || |||| ||||||||| | ||||||||| | ||| | ||| | |||||| ||||||||| |||||  ||||||||| ||||||    
T  1269226 aagagctagtgacgacgaaacaaggacccgagtaatagaggcaacctccagaagaaatcacccccaacaaacacccgcctcctc 1269143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 353
Target Start/End: Original strand, 10173484 - 10173839
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagccc 100  Q
    ||||| |||||||| ||||||||  ||| ||  |||||||||||||| |||||||||||| ||| |||| |||  |||||||||| ||||  ||||||||    
T  10173484 caaagctgagccacatccgaaaag-ctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaacaccaacaaaagccc 10173582  T
Q  101 aaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac---- 196  Q
    |||| ||||||||| ||||| |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||| ||||||  |||        
T  10173583 aaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaaaagagcacccttcacctct 10173682  T
Q  197 ggtacaccagagaaacacc-aaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagca 295  Q
    |||||||||||||||||||   |||| | ||||||| || ||||||||||||||||| |||||| | || ||||| ||||| || |||||  |||||  |    
T  10173683 ggtacaccagagaaacaccgttatcaagccaaacaagattgcagctagacaccgacttccgatcccgaaacaaaagtaaccagcacaccggaaaccaata 10173782  T
Q  296 cacaaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaacagatca 353  Q
    ||||| || || ||| ||||||||  ||||| |||| |||||||| ||||||| ||||    
T  10173783 cacaataaataagac-aaaacgacatgatatgcggtggtgcaaaccacaaacaaatca 10173839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 39338863 - 39339088
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| || |||||||||      
T  39338863 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccct 39338962  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||| ||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||| |||| |||| ||| |||||||||  |    
T  39338963 cgcccccggtacaccaaagaaaaaccaaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaa 39339062  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||||||||||| | ||| |||||||    
T  39339063 accagcacacaatatgtaagacgaaa 39339088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 37 - 269
Target Start/End: Complemental strand, 13337414 - 13337178
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    |||||||||||||  | |||||||| ||| ||||  ||  ||||||||||||||||||||| |||||| | |||||||  ||||||||||||| |||||     
T  13337414 aaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaacctaacttgagtcaaagaactgacttccgatt 13337315  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccc-cac---ggtacaccagagaaacaccaaatcacgtcaaacaaa 232  Q
    ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||   ||||||||||||||||||||||||||| || | ||     
T  13337314 tcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccctcaccctggtacaccagagaaacaccaaatcacgccagataag 13337215  T
Q  233 atagcagctagacaccgactcccgatctcaaagcaaa 269  Q
    || || ||||||||||||||| | ||||| |||||||    
T  13337214 attgctgctagacaccgactctcaatctcgaagcaaa 13337178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 27 - 300
Target Start/End: Original strand, 14106451 - 14106732
Alignment:
Q  27 ctcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaaga----aaccataaaaagcccaaaatcaaacttgatccaaaga 122  Q
    ||||||||| || |||||| || ||||||| |||| ||| ||||||||  |||||||||    ||  | ||||| || |||| ||||  ||||| |||||    
T  14106451 ctcttaaccgaatgatcatacaacttccacaacctctcgacctctgatccaccgaaagagcacaaaaacaaaaacccaaaaaccaaaactgatctaaaga 14106550  T
Q  123 actgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaa 218  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    |||  ||||||  |||| |||||||||    
T  14106551 gctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaacaccaaa 14106650  T
Q  219 tcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    ||| ||||||||  || |||||||| |||||||||||  |||| |||||||| ||||||||||||||  ||||| |||||||    
T  14106651 tcaagtcaaacaggattgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaa 14106732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 93 - 300
Target Start/End: Complemental strand, 7874375 - 7874165
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | |||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||     
T  7874375 aaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcaccca 7874276  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
       ||| |||||||| |||| ||||||| |||| ||||| ||  || ||||||||||||| |||||||||||| ||||||||  |||||||||||||       
T  7874275 tcgccctcggtacactagag-aacaccatatcaagtcaagcaggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggac 7874177  T
Q  289 accagcacacaa 300  Q
    ||||||||||||    
T  7874176 accagcacacaa 7874165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 37 - 180
Target Start/End: Complemental strand, 34230341 - 34230198
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||||||||| ||  |||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  34230341 aaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaaaccacaaaaagcccaaaatcaaacttgatccaaagaactgactcctgatc 34230242  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatca 180  Q
    |||||| |||| ||||||||||| || |||||| || |||||||    
T  34230241 tcgaataaaaaatgatcggcccatcaaactttacgatcaaatca 34230198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 39 - 284
Target Start/End: Original strand, 22885076 - 22885324
Alignment:
Q  39 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 137  Q
    |||||| ||| |||||||||||| ||  |||||| |  |||||||||| |||| || || ||||||| ||||||||| ||||||||||||||||||||||    
T  22885076 agatcaatcaacttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaa-cccaaaaccaaacttgaaccaaagaactgactcccgatct 22885174  T
Q  138 cgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtcaaacaaaa 233  Q
    |||||||||||||||||||||||||||||| |||| |||| |||  ||||||||    ||| |  | |||||||| ||||||  | | || |||||||      
T  22885175 cgaatcaaaagtgatcggcccaccagacttcaggatcaaaccag-cgggcacccctaacccccaatccaccagagcaacaccgtagcccgccaaacaagg 22885273  T
Q  234 tagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
     |||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  22885274 aagcagctagacaccaactcccgatctcgaagcaaaagtaaccggcccacc 22885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 125 - 300
Target Start/End: Complemental strand, 10524149 - 10523969
Alignment:
Q  125 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac----cccccacggtacaccagagaaacaccaaatc 220  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | |||||||    | ||| | ||| |||||||||| ||||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctctcgcccccagtagaccagagaaaaaccaaatc 10524050  T
Q  221 acgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    | |||||||||| || ||| |||||  ||||||||||||||| |||| |||| |||||| ||||||  |||||||||||||    
T  10524049 aagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtccaccgaaaaccagcacacaa 10523969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 300
Target Start/End: Complemental strand, 17105470 - 17105284
Alignment:
Q  119 aagaactgactcccgatctcgaatcaaaa-gtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaaca 213  Q
    |||| |||| || |||||||||||||||| |||||||||||| ||||||| || |||||||||| |||||||||| |||    ||||||||| |||||||    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccctcacccctggtacaccaaagaaaca 17105371  T
Q  214 ccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    || ||| | |||||||||  | |||||||||| ||||||||  ||||| |||||||| |||||| |||||||  |||||||||||||    
T  17105370 cctaattaagtcaaacaaggttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaa 17105284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 93 - 180
Target Start/End: Complemental strand, 14405282 - 14405195
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatca 180  Q
    |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14405282 aaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatca 14405195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 284
Target Start/End: Complemental strand, 4472006 - 4471813
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||| |||| |||| |||      
T  4472006 aaagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactccaggaccaaaccagacgggccccctt 4471907  T
Q  192 -cccacggtacaccagagaaacac-caaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
     ||| |||| ||||||||||||||   | ||| | ||||||| | || || ||||| || |||||||||||  |||||||| |||||||||||||    
T  4471906 acccccggtccaccagagaaacactgtagtca-gccaaacaataaagtagatagacgccaactcccgatcttgaagcaaaagtaaccggcccacc 4471813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 16960064 - 16959985
Alignment:
Q  95 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 174  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  16960064 aagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttaggacc 16959985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 16952289 - 16952590
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagccc 100  Q
    ||||||||| |||| ||||||||  ||| || || ||||||| || |||||||||||||| ||  |||| |||  |||||||||| |||| |||| | ||    
T  16952289 caaagttgatccacatccgaaaag-ctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtcc 16952387  T
Q  101 aaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacg 197  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||||  | ||| |||||||| ||| ||||||||| |||||   || ||    
T  16952388 aaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccctaaccccg 16952487  T
Q  198 gtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcaca 297  Q
    || ||| |||||||||| | ||||   | ||||| || ||| ||| ||||  |||| ||||||| ||| |||| ||||| | ||| ||  ||||||||||    
T  16952488 gtccactagagaaacacgatatcaaacccaacaagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcaca 16952587  T
Q  298 caa 300  Q
    |||    
T  16952588 caa 16952590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 17022954 - 17023255
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagccc 100  Q
    ||||||||| |||| ||||||||  ||| || || ||||||| || |||||||||||||| ||  |||| |||  |||||||||| |||| |||| | ||    
T  17022954 caaagttgatccacatccgaaaag-ctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtcc 17023052  T
Q  101 aaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacg 197  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||||  | ||| |||||||| ||| ||||||||| |||||   || ||    
T  17023053 aaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccctaaccccg 17023152  T
Q  198 gtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcaca 297  Q
    || ||| |||||||||| | ||||   | ||||| || ||| ||| ||||  |||| ||||||| ||| |||| ||||| | ||| ||  ||||||||||    
T  17023153 gtccactagagaaacacgatatcaaacccaacaagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcaca 17023252  T
Q  298 caa 300  Q
    |||    
T  17023253 caa 17023255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 17060260 - 17060561
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagccc 100  Q
    ||||||||| |||| ||||||||  ||| || || ||||||| || |||||||||||||| ||  |||| |||  |||||||||| |||| |||| | ||    
T  17060260 caaagttgatccacatccgaaaag-ctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtcc 17060358  T
Q  101 aaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacg 197  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||||  | ||| |||||||| ||| ||||||||| |||||   || ||    
T  17060359 aaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccctaaccccg 17060458  T
Q  198 gtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcaca 297  Q
    || ||| |||||||||| | ||||   | ||||| || ||| ||| ||||  |||| ||||||| ||| |||| ||||| | ||| ||  ||||||||||    
T  17060459 gtccactagagaaacacgatatcaaacccaacaagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcaca 17060558  T
Q  298 caa 300  Q
    |||    
T  17060559 caa 17060561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 7696102 - 7695985
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    |||||||||||||||||||||||||  || |||  |||  ||||||||||||| ||||| |||||||| | ||||||| |||||||||||||||||| |     
T  7696102 aaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaaaccgtaaaa-gcccaaaacctaacttgagccaaagaactgactcccggta 7696004  T
Q  137 tcgaatcaaaagtgatcgg 155  Q
    |||||||||||||||||||    
T  7696003 tcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 15126391 - 15126488
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 174  Q
    |||||||||| ||||||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  15126391 accgaaagaacaccataaaa-gcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacc 15126488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 2063029 - 2062901
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    |||||||| |||| |||||| ||||  |  |||||| || |||||||||| |||| ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  2063029 aaagatcaatcagtttccacaacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 2062931  T
Q  136 ctcgaatcaaaagtgatcggcccaccagac 165  Q
    |||||||||||||  |||||||||||||||    
T  2062930 ctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 387257 - 387158
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||||| ||||| | |||||||  ||||||| |||||||||||||| |||||||||||||| |||||||||||||||| ||||||| || ||||||||||    
T  387257 aaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccc 387158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 18681149 - 18681054
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 188  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |  |||||||||||| |||| |  |||||||||||||||||    
T  18681149 aaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaagggca 18681054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 33788575 - 33788708
Alignment:
Q  39 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 137  Q
    |||||| |||||||||||||||| ||  |||||| |  |||||||||| |||| || || ||||||  ||||| ||| ||||||||||||||||| ||||    
T  33788575 agatcaatcagcttccaccacctctcaacctctggttcaccgaaagaacaccaaaacaa-cccaaagccaaacctgaaccaaagaactgactcccaatct 33788673  T
Q  138 cgaatcaaaagtgatcggcccaccagactttagga 172  Q
    ||||||||||| |||||||||||||||||| ||||    
T  33788674 cgaatcaaaagcgatcggcccaccagacttcagga 33788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 270
Target Start/End: Complemental strand, 14566489 - 14566350
Alignment:
Q  134 atctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacggtacaccagagaaacaccaaatcacgtcaaaca 230  Q
    ||||||||||| ||  ||||| |||| ||||||| ||||||||| |||| |||||||||   || | || |||||||||||||||  | | |||||||||    
T  14566489 atctcgaatcagaatcgatcgccccatcagacttcaggaccaaaccagacgggcacccctaaccccagtccaccagagaaacaccgtagctcgtcaaaca 14566390  T
Q  231 aaatagcagctagacaccgactcccgatctcaaagcaaaa 270  Q
    ||| |||||||||||||| |||| ||||||| ||||||||    
T  14566389 aaaaagcagctagacaccaactctcgatctcgaagcaaaa 14566350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 300
Target Start/End: Complemental strand, 17079270 - 17079043
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 175  Q
    |||||||||| |||| |||| | |||||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||||  | ||| |||||||| ||    
T  17079270 accgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctttaggaaca 17079171  T
Q  176 aatcagaagggcacccc---ccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaatt 272  Q
    | ||||||||| |||||   || |||| ||| |||||||||| | ||||   | ||||| || ||| ||| ||||  |||| ||||||| ||| |||| |    
T  17079170 attcagaagggaacccctaaccccggtccactagagaaacacgatatcaaacccaacaagattgcaactacacacaaactctcgatctcgaagtaaaagt 17079071  T
Q  273 aaccggcccaccgctaaccagcacacaa 300  Q
    |||| | ||| ||  |||||||||||||    
T  17079070 aaccagtccatcgaaaaccagcacacaa 17079043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 25504904 - 25505005
Alignment:
Q  92 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||||| ||| || ||||||||||  | |||||||||| |||||||||    
T  25504904 aaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacc 25505003  T
Q  191 cc 192  Q
    ||    
T  25505004 cc 25505005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 31902413 - 31902510
Alignment:
Q  95 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||| ||||| ||||||||| ||| ||||||||||||||||||||||| ||||| ||| |||||||||||||| || | ||||| |||||| ||||||    
T  31902413 aagctcaaaaccaaacttgaaccagagaactgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacacccc 31902510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 27740113 - 27739960
Alignment:
Q  39 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 137  Q
    |||||| |||| ||||||||||| ||  |||||| |  |||||||||| |||| || || ||||| | ||||||||| || ||  |||||||| ||||||    
T  27740113 agatcaatcagtttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaa-cccaagaccaaacttgaaccgaaacactgactctcgatct 27740015  T
Q  138 cgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
     |||||||||| |||||||||||||||||| ||||||||  |||| |||||||||    
T  27740014 tgaatcaaaagcgatcggcccaccagacttcaggaccaatccagatgggcacccc 27739960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 101 - 281
Target Start/End: Complemental strand, 29487206 - 29487024
Alignment:
Q  101 aaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc----ccac 196  Q
    |||| ||||| ||| || |||||||||||  | ||||||||||||||| ||| |||| ||||||||| | || |||| |||| |||||||||    || |    
T  29487206 aaaaccaaacatgaaccgaagaactgactatcaatctcgaatcaaaagcgattggcc-accagacttcaagatcaaaccagacgggcacccctaaccccc 29487108  T
Q  197 ggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggccc 281  Q
     || ||||||||||||||| |  | || || |||| | |||||||||||||| |||||||||||| |||||||| ||||||||||    
T  29487107 agtccaccagagaaacaccgagcc-cgccagacaagaaagcagctagacaccaactcccgatctcgaagcaaaagtaaccggccc 29487024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 5254340 - 5254263
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttag 170  Q
    |||||||| ||| | ||||||| ||||||| | ||||||||||||| ||| ||||||||||||||||| |||||||||    
T  5254340 aaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagactttag 5254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 284
Target Start/End: Complemental strand, 15710776 - 15710596
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacac 203  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| |  ||  | ||||||||||||||||| ||    |||| |||    
T  15710776 aacttgaactaaagaactgattgacgatctcgaatcaaaagtgattggttcaccagacatctgggtctaatcagaagggcacccctcacctccggttcac 15710677  T
Q  204 cagagaaacacca-aatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    ||||||||||| | | ||| | ||||||| || ||| ||| ||||| ||||||||||||||||||||| |||  ||||||||    
T  15710676 cagagaaacactatagtca-gccaaacaagattgcaactaaacaccaactcccgatctcaaagcaaaagtaattggcccacc 15710596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 23650444 - 23650384
Alignment:
Q  118 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 178  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 4162052 - 4162090
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 3745297 - 3745227
Alignment:
Q  236 gcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagta 306  Q
    |||||||||| || |||||||||||||||| |||| |||||||||||||   | ||||||||||| |||||    
T  3745297 gcagctagacgccaactcccgatctcaaagtaaaagtaaccggcccaccagaatccagcacacaataagta 3745227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 3745420 - 3745356
Alignment:
Q  92 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcgg 155  Q
    ||||||||||||| |||| ||| | |||||||||||||| |||||||||||| ||||| ||||||    
T  3745420 aaaaagcccaaaaacaaaacttaaaccaaagaactgacttccgatctcgaattaaaagcgatcgg 3745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 9560820 - 9560860
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagacttt 168  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccaccaaacttt 9560860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 23665439 - 23665474
Alignment:
Q  131 ccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||||||| |||||    
T  23665439 ccgatctcgaatcaaaagtgatcggcccactagact 23665474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 27880139 - 27880189
Alignment:
Q  106 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggc 156  Q
    ||||||||| ||||| |||||||| |||||||||||||||||  |||||||    
T  27880139 caaacttgaaccaaataactgacttccgatctcgaatcaaaatcgatcggc 27880189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 915447 - 915523
Alignment:
Q  91 taaaaagc-ccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 167  Q
    |||||||| |||||| |||||||||  |||| ||||||||  ||||||||||||||||| |||| |||||||| ||||    
T  915447 taaaaagctccaaaaccaaacttgaatcaaa-aactgactttcgatctcgaatcaaaagcgatcagcccaccatactt 915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 36276200 - 36276241
Alignment:
Q  125 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||| || | ||||||||||||    
T  36276200 tgactcccgatctcgaatcaaaagcgaacagcccaccagact 36276241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 2062845 - 2062797
Alignment:
Q  236 gcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    ||||||||||||| |||||||||||| |||||||| |||  ||||||||    
T  2062845 gcagctagacaccaactcccgatctcgaagcaaaagtaattggcccacc 2062797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 34143079 - 34143123
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||    
T  34143079 aactgacttccgatctagaagcaaaagtgatcggctcaccagact 34143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 36 - 512
Target Start/End: Original strand, 42078 - 42559
Alignment:
Q  36 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 135  Q
    ||||||| ||||||||||||||| || ||| |||| |||  || ||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  42078 aaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgat 42177  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccac----ggtacaccagagaaacaccaaatcacgtc-aaaca 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    |||| |||||||||||| ||||| | | | |||||    
T  42178 ctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcacctttggtataccagagaaacatcaaattaagccaaaaca 42277  T
Q  231 aaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacgg 330  Q
    | |  ||||||||||| |||||||||||||| ||||||||||||||| |||| ||  |||||||| ||||| |||| |||  |||||||  |||| | ||    
T  42278 agaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagcatacaaacagtaagac--aaacgacatgatagatgg 42375  T
Q  331 tagtgcaaacaacaaacagat-cataagaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatc 429  Q
    | |||||||||||||||| || || | |||||  || |  ||||   || | |||  |||||||| || ||||||| |||||||| |||||| | ||| |    
T  42376 tggtgcaaacaacaaacatatccaaaggaaaaggcttagctcaatgagatcggctccctccaaacaccataaacactttaacaaccccaaaaacgcaaac 42475  T
Q  430 aacagctggtgacgacg-accaaggacccaaataacaaaggtagcctccaaaagaaatcatccccacgaaacacccgtctcctc 512  Q
    || |||| ||||||||| | ||||||||| | ||| | ||| | |||||| ||||||||| |||||  ||||||||| ||||||    
T  42476 aagagctagtgacgacgaaacaaggacccgagtaatagaggcaacctccagaagaaatcacccccaacaaacacccgcctcctc 42559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 22 - 310
Target Start/End: Complemental strand, 58282 - 57990
Alignment:
Q  22 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaag 121  Q
    |||| |||||| || |||||| |||||||||||| || || ||| |||| |||  ||||||||||||||||||||||| |||| |||||||||||||||     
T  58282 aaaagctcttatccgaaagataattcagcttccatcatctctcgacctccgatccaccgaaagaaaccataaaaagcctaaaaccaaacttgatccaaac 58183  T
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac----cccccacggtacaccagagaaacaccaa 217  Q
    || ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||    | |||  |||||||||||||||||||||    
T  58182 aattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcaccatacaccctaggtacaccagagaaacaccaa 58083  T
Q  218 atcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgac 310  Q
    |||||| ||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| |  |  || ||||||||||||||||||||    
T  58082 atcacgccaaacaagattgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcctaatggaaatcagcacacaaaaagtatgac 57990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 485
Target Start/End: Complemental strand, 57980 - 57882
Alignment:
Q  387 ctccaaactccctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaagaaa 485  Q
    |||||||| ||||||||||||||||||| | |||| | ||| ||  |||| |||||||||| |||||||   | | ||| |||||||||||||||||||    
T  57980 ctccaaacaccctaaacaccttaacaacccaaaaaacgcaaacatgagctagtgacgacgaacaaggacatgagttacagaggtagcctccaaaagaaa 57882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 4e-67; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 37 - 265
Target Start/End: Complemental strand, 27102331 - 27102098
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    ||||||||||||||||||||||||| ||| |||| |||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  27102331 aaagatcattcagcttccaccacctctcgacctccgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatc 27102232  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccc-----cacggtacaccagagaaacaccaaatcacgtcaaacaa 231  Q
    ||||||||||||||||||||||   |||||||  ||||||| |||||||||||||||     | |||||||||||||||||||||||||||| |||| ||    
T  27102231 tcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccctcaccctcggtacaccagagaaacaccaaatcacgccaaataa 27102132  T
Q  232 aatagcagctagacaccgactcccgatctcaaag 265  Q
     || ||||| ||||||||||| || |||||||||    
T  27102131 gattgcagccagacaccgacttccaatctcaaag 27102098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 94 - 314
Target Start/End: Complemental strand, 41920535 - 41920311
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc- 192  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||     
T  41920535 aaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccct 41920436  T
Q  193 --ccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaa 289  Q
      || | |||||||||||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||| |||| |||| |||||||||||||  ||    
T  41920435 cgccccagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 41920336  T
Q  290 ccagcacacaaaaagtatgacgaaa 314  Q
    | ||||||||| | ||| |||||||    
T  41920335 ctagcacacaatatgtaagacgaaa 41920311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 116 - 270
Target Start/End: Original strand, 9313309 - 9313467
Alignment:
Q  116 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccacgg----tacaccagagaaa 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||     ||||| |||||||    
T  9313309 ccaaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacgcccgatacacgagagaaa 9313408  T
Q  212 caccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaa 270  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||    
T  9313409 caccaaatcacggcaaacaaaattgcagctagacaccaactcccgatctcgaagcaaaa 9313467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 94 - 284
Target Start/End: Original strand, 31585758 - 31585953
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccc 193  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||     
T  31585758 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccct 31585857  T
Q  194 cacg----gtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    |||     |||||||||||||| ||||||||| |||||||||| || |||||||||| ||||||||||||||| |||| |||| ||||||||||||    
T  31585858 caccctcagtacaccagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccacc 31585953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 94 - 312
Target Start/End: Complemental strand, 24659012 - 24658791
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||      
T  24659012 aaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcacccct 24658913  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaa 289  Q
      ||| || |||||||||| ||||||| |||| ||||||||  || ||||||||||||| |||||||||||  |||||||| ||||||||||||||        
T  24658912 tgcccccgatacaccagag-aacaccatatcaagtcaaacatgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccggact 24658814  T
Q  290 ccagcacacaaaaagtatgacga 312  Q
    ||||||||||||| ||| |||||    
T  24658813 ccagcacacaaaatgtaagacga 24658791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 37 - 192
Target Start/End: Original strand, 6583157 - 6583312
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 136  Q
    |||||||| |||||||||||||||| ||| |||| |||  ||||||||||||||||||||||  |||| ||||  |||||||||||| ||||| ||||||    
T  6583157 aaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaagcaaaaaaccaaaactgatccaaagaattgactgccgatc 6583256  T
Q  137 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  6583257 tcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccc 6583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 41 - 278
Target Start/End: Complemental strand, 34775007 - 34774767
Alignment:
Q  41 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaa-ctgactcccgatctcg 139  Q
    |||| |||||||||||||||| ||  ||||  ||  ||||||||||||||||||||||||||||  |||||||| ||||| || ||||||||||||||||    
T  34775007 atcaatcagcttccaccacctctcaacctccaattcaccgaaagaaaccataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctcg 34774908  T
Q  140 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc---ccccacggtacaccagagaaacaccaaatcacgtcaaacaaaatag 236  Q
    | |||||||||||||| ||||||||| ||||||||||||||||||||||||   | || | ||| || ||||||||| ||||||| | ||||||| || |    
T  34774907 a-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcaccactcacccccgtatactagagaaacatcaaatcaagccaaacaagattg 34774809  T
Q  237 cagctagacaccgactcccgatctcaaagcaaaattaaccgg 278  Q
     || |||||||||||||||| |||| |||||||| |||||||    
T  34774808 tagttagacaccgactcccgttctcgaagcaaaagtaaccgg 34774767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 94 - 300
Target Start/End: Original strand, 5389419 - 5389630
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||||||| ||  ||||||||      
T  5389419 aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccct 5389518  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      ||| |||||||||||||||| | ||||||| |||||||||| || |||||||||| | ||||||||||||| |||| |||| ||||||||||| |  |    
T  5389519 cgcccccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaa 5389618  T
Q  289 accagcacacaa 300  Q
    ||||||||||||    
T  5389619 accagcacacaa 5389630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 52 - 310
Target Start/End: Original strand, 32864517 - 32864781
Alignment:
Q  52 tccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtga 151  Q
    ||||||||||  || ||||||||  ||  |||||||||||||||||||||||| |||||||||  |||||||| |||| |||||||||||| ||||||||    
T  32864517 tccaccacctcccgacctctgatccacaaaaagaaaccataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtga 32864616  T
Q  152 tcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaacaccaaatcacgtc-aaacaaaatagcagctagaca 246  Q
    | |||||||||| ||||||||||||||| |||||||||||    ||| | ||| | |||| ||||||||||| | | | |||||| || | |||||||||    
T  32864617 ttggcccaccagcctttaggaccaaatcggaagggcacccctcaccctcagtagatcagataaacaccaaataaagccaaaacaagattgtagctagaca 32864716  T
Q  247 ccgactcccgatctcaaagcaaaattaaccggcccacc-gctaaccagcacacaaaaagtatgac 310  Q
    |||||||| ||| || |||||||| ||||||||||||| |  ||| ||||||||||| |||||||    
T  32864717 ccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaactagcacacaaaacgtatgac 32864781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 30685902 - 30686127
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | |||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| ||||||| || |||||||||      
T  30685902 aaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccct 30686001  T
Q  192 --cccacggtacaccagagaaacaccaaatcacgtcaaacaa-aatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
      |||  ||||||||||||||| ||||||||| |||||||||  || |||| |||||  |||||||||||||| |||| |||| |||||||||||||  |    
T  30686002 cgccccaggtacaccagagaaaaaccaaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaa 30686101  T
Q  289 accagcacacaaaaagtatgacgaaa 314  Q
    |||| ||||||| | ||| |||||||    
T  30686102 accaacacacaatatgtaagacgaaa 30686127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 46814464 - 46814656
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    ||||||| |||| | ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||     
T  46814464 aaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccc 46814563  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggccca 282  Q
       ||| ||||||||||||| ||||||| |||| ||||||||  || ||| ||||||||| |||| ||||||| || ||||| |||||||||||    
T  46814564 ttgcccccggtacaccagag-aacaccatatcaagtcaaacaggattgcaactagacaccaactctcgatctcgaatcaaaaataaccggccca 46814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 125 - 300
Target Start/End: Complemental strand, 7857705 - 7857527
Alignment:
Q  125 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc----ccacggtacaccagagaaacaccaaatc 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    || | ||||||||||||| || || |||    
T  7857705 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcccccagtacaccagagaa-caacatatc 7857607  T
Q  221 acgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    | |||||||| ||| ||| ||||||||| |||||||||||| |||||||| ||| |||||||| |  |||||||||||||    
T  7857606 aagtcaaacataattgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccagcacacaa 7857527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 94 - 300
Target Start/End: Original strand, 46692817 - 46693028
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc- 192  Q
    ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||  ||||||| || |||||||| |     
T  46692817 aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctct 46692916  T
Q  193 ---ccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgcta 288  Q
       || |||||||||||||||| | ||||||| |||||||||| || ||| ||||||  |||||||||||||| |||| |||| || ||||||||||  |    
T  46692917 cgcccccggtacaccagagaaaaatcaaatcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccgaaa 46693016  T
Q  289 accagcacacaa 300  Q
    || |||||||||    
T  46693017 actagcacacaa 46693028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 37 - 346
Target Start/End: Complemental strand, 16147698 - 16147384
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaa--ccataaaaa-gcccaaaatcaaacttgatccaaagaactgactcccg 133  Q
    |||||||||||| ||| |||||||| ||  |||| ||| ||||||||||||  ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  16147698 aaagatcattcaactttcaccacctctccacctccgatctaccgaaagaaataccataaaaaagtccaaaatcaaacttgacccaaagaactgactcccg 16147599  T
Q  134 atctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac----cccccacggtacaccagagaaacaccaaatcacgtcaaac 229  Q
    || | ||||||||| | |||| ||||||| |||| | ||||||| |||||||| ||    | ||| |||||| | ||||||||||||||||| | |||||    
T  16147598 atattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcacccccggtacgctagagaaacaccaaatcaagccaaac 16147499  T
Q  230 aaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacg 329  Q
    || || |||||||||||  ||||||||||||| ||  |||| ||| ||||||||||  | | | ||||||| ||||| |||  ||| |||  ||||| ||    
T  16147498 aagattgcagctagacagtgactcccgatctcgaactaaaagtaatcggcccaccggaacctaacacacaataagtaagac--aaatgacatgatatgcg 16147401  T
Q  330 gtagtgcaaacaacaaa 346  Q
    || ||||||||||||||    
T  16147400 gtggtgcaaacaacaaa 16147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 17033672 - 17033570
Alignment:
Q  92 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 190  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17033672 aaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcacc 17033573  T
Q  191 ccc 193  Q
    |||    
T  17033572 ccc 17033570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 93 - 314
Target Start/End: Original strand, 24684475 - 24684699
Alignment:
Q  93 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 191  Q
    |||||||||||| | |||| ||  ||||||||||||  |||||||||||| ||||||||||||||||||||||||||| | ||||| || |||||||||     
T  24684475 aaaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccc 24684574  T
Q  192 ---cccacggtacaccagagaaacaccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgct 287  Q
       ||| |||||||||||||||| ||||||||| |||||||||| ||  ||||||||| ||||||||||||||| |||| |||| ||  || ||||||      
T  24684575 tcgcccccggtacaccagagaaa-accaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattgg-ccaccgaa 24684672  T
Q  288 aaccagcacacaaaaagtatgacgaaa 314  Q
    ||||||||||||| | ||| |||||||    
T  24684673 aaccagcacacaatatgtaagacgaaa 24684699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 38544749 - 38544928
Alignment:
Q  107 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtaca 202  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| ||||| ||    | || ||    
T  38544749 aaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtcca 38544847  T
Q  203 ccagagaaacacc-aaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccac 283  Q
    ||||||||||||| ||||||  |||||||| || ||||||||||||| |||||| ||||| |||||||| ||| ||||||||    
T  38544848 ccagagaaacaccaaaatca-atcaaacaagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccac 38544928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 117 - 282
Target Start/End: Original strand, 24449951 - 24450121
Alignment:
Q  117 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacaccagagaaac 212  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||  || |||||||||    ||| ||||||||||||||||     
T  24449951 caaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcccccggtacaccagagaaaa 24450050  T
Q  213 accaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggccca 282  Q
    |||||| || |||||||||| || |||||||||| ||||||||||||||| |||| |||| || |||||||    
T  24450051 accaaaccaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggccca 24450121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 414
Target Start/End: Original strand, 6583335 - 6583511
Alignment:
Q  236 gcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggtagtg 335  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||| |||||||||||||||||   ||||||  ||||| |||| |||    
T  6583335 gcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac---aacgacgtgatatgcggtggtg 6583431  T
Q  336 caaacaacaaacagatcataagaaaata-ctcatttcaacaggacccgctgactccaaactccctaaacaccttaacaac 414  Q
    |||||||||||| ||||| ||||||| | ||||   ||||  ||||| ||  || ||||| |||||||||||||||||||    
T  6583432 caaacaacaaactgatcaaaagaaaaaaactcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaac 6583511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 19598736 - 19598621
Alignment:
Q  77 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 175  Q
    |||||||||| |||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||     
T  19598736 accgaaagaacaccataaaaa-cccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggaccc 19598638  T
Q  176 aatcagaagggcacccc 192  Q
    || |||| |||||||||    
T  19598637 aaccagacgggcacccc 19598621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 108 - 248
Target Start/End: Original strand, 27031852 - 27031995
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacac 203  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    ||| ||||||||    
T  27031852 aacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccctttcccccggtacac 27031951  T
Q  204 cagagaaacaccaaatcacgtcaaacaaaatagcagctagacacc 248  Q
    ||||| ||||||| ||||  |||||||  || |||| ||||||||    
T  27031952 cagag-aacaccatatcaactcaaacaggattgcaggtagacacc 27031995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 118 - 300
Target Start/End: Original strand, 20113543 - 20113730
Alignment:
Q  118 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc----ccacggtacaccagagaaaca 213  Q
    |||||||||| ||||||||| ||||||||| |||||| |||| |||||| ||  ||||||| || ||||||||||    || ||||||||| |||||| |    
T  20113543 aaagaactgattcccgatcttgaatcaaaaatgatcgtcccagcagactataataccaaattagcagggcacccctcgcccccggtacacccgagaaaaa 20113642  T
Q  214 ccaaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaa 300  Q
    ||||| ||  || |||||| || |||||||||| ||||||||||||||| |||| |||| |||||||||||||  ||| |||||||||    
T  20113643 ccaaaccatatctaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaa 20113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 4651864 - 4651739
Alignment:
Q  92 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 191  Q
    ||||||||||||| |||||| || ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||  | || || ||||||||||||||    
T  4651864 aaaaagcccaaaaccaaactagaaccagaga-ctgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcaccc 4651766  T
Q  192 ----cccacggtacaccagagaaacac 214  Q
        ||| |||||||||||||||||||    
T  4651765 cttacccccggtacaccagagaaacac 4651739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 95 - 300
Target Start/End: Original strand, 50589206 - 50589413
Alignment:
Q  95 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc-- 192  Q
    |||||||||| ||||||||  ||||||||||| |||||||| |||||||||||| |||| ||||||| ||||| |||||| || |||| |||||||||      
T  50589206 aagcccaaaaccaaacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagacgggcacccctt 50589305  T
Q  193 --ccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgctaac 290  Q
      || | || ||||||||||||  |  | |  | ||||||| | ||||||||||| || | |||||||||| ||||||||||||||||||||||   | |    
T  50589306 acccccagtccaccagagaaac--cgtagccagccaaacaagaaagcagctagacgccaagtcccgatctcgaagcaaaattaaccggcccaccagaatc 50589403  T
Q  291 cagcacacaa 300  Q
    ||||||||||    
T  50589404 cagcacacaa 50589413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 10785405 - 10785524
Alignment:
Q  41 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcga 140  Q
    |||||||||||||||||||||  || |||| ||   ||||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  10785405 atcattcagcttccaccacctcgcgacctccgaaccaccgaaa-aaatcataaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcga 10785503  T
Q  141 atcaaaagtgatcggcccacc 161  Q
    | ||||| | | |||||||||    
T  10785504 agcaaaattaaccggcccacc 10785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 42374304 - 42374148
Alignment:
Q  37 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgat 135  Q
    |||||||| |||||||||||||||| ||   ||| | ||| |||||||||  |  || |||||||||| |||| ||||| |||||  |||||||||||||    
T  42374304 aaagatcaatcagcttccaccacctctcaatctccggtatgccgaaagaacgccaaacaagcccaaaaccaaaacttgaaccaaaagactgactcccgat 42374205  T
Q  136 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    ||| ||||||||| |||||| |||||||||   | ||||||||||||||||||||||    
T  42374204 ctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcacccc 42374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 5459244 - 5459146
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 192  Q
    |||||||||||   |||||||  |||| || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||| |||||    
T  5459244 aaagcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccc 5459146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 494
Target Start/End: Original strand, 10785489 - 10785729
Alignment:
Q  249 gactcccgatctcaaagcaaaattaaccggcccaccgctaaccagcacacaaaaagtatgacgaaaacgactcgatatacggtagtgcaaacaacaaaca 348  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||| |||  |||| ||  ||||  |||  |||||||||||         
T  10785489 gactcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaaacagtaagac--aaaccacaagataggcgggggtgcaaacaac----- 10785581  T
Q  349 gatcataa-gaaaatactcatttcaacaggacccgctgactccaaactccctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacg- 446  Q
    ||||| || |||||  ||||  ||||  ||||| |||  |||||||| ||||||||||||||||||| ||||||   ||| |||  | | |||||||||     
T  10785582 gatcaaaaggaaaaggctcagctcaatgggacctgctccctccaaacaccctaaacaccttaacaaccccaaaaatgcaaacaagggttagtgacgacga 10785681  T
Q  447 -accaaggacccaaataacaaaggtagcctccaaaagaaatcatcccca 494  Q
     ||||| ||||||| ||||| ||| |||||||||||||||||| |||||    
T  10785682 aaccaa-gacccaagtaacagaggcagcctccaaaagaaatcaccccca 10785729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 15840938 - 15840995
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatc 179  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||    
T  15840938 aactgactcccgatctcgaatcaaaagtgatcagcccaccagactctagaaacaaatc 15840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 46603472 - 46603381
Alignment:
Q  98 cccaaaatcaaac-ttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 188  Q
    ||||||||||||  |||| ||||||||||||||| ||||||||||||||||| ||  |||||||||||||  | |||| |||||| ||||||    
T  46603472 cccaaaatcaaaaattgaaccaaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagactacatgacctaatcaggagggca 46603381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 31290926 - 31291027
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagccca 101  Q
    ||||| |||||||| ||||||||  ||| || || ||||||||  || |||||||||||| ||| |||| |||  |||||||||||||||||||||||||    
T  31290926 caaagctgagccacatccgaaaag-ctcctatccgaaagatcaagcaacttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagccca 31291024  T
Q  102 aaa 104  Q
    |||    
T  31291025 aaa 31291027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 27905493 - 27905420
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 169  Q
    |||||||||  |||| |||  ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  27905493 agcccaaaacaaaacatgaatcaaagaactaacttctgatctcgaatcaaaagtgatcggtccaccagacttta 27905420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 30655615 - 30655571
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 9081506 - 9081563
Alignment:
Q  96 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcg 154  Q
    ||||||||| ||||||||| | |||| |||| |||||||||||||||||||||||||||    
T  9081506 agcccaaaagcaaacttga-ctaaagcactggctcccgatctcgaatcaaaagtgatcg 9081563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 481
Target Start/End: Complemental strand, 7857438 - 7857344
Alignment:
Q  387 ctccaaactccctaaacaccttaacaactccaaaagcacaatcaacagctggtgacgacgaccaaggacccaaataacaaaggtagcctccaaaa 481  Q
    |||||||| ||||||||||||| ||||| |||||  | ||| ||| |||| |||||||||| || |||||| | ||||| ||  |||||||||||    
T  7857438 ctccaaacaccctaaacaccttgacaaccccaaagacgcaaacaagagctagtgacgacgaacatggacccgagtaacagagccagcctccaaaa 7857344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 38564950 - 38564912
Alignment:
Q  128 ctcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagact 38564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 42374090 - 42374049
Alignment:
Q  123 actgactcccgatctcgaatcaaaagtgatcggcccaccaga 164  Q
    ||||||||||||||||||||||||||| | ||| ||||||||    
T  42374090 actgactcccgatctcgaatcaaaagtaaccggtccaccaga 42374049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 16577435 - 16577352
Alignment:
Q  2 caaagttgagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa 86  Q
    |||||||||||||| ||||||||  ||| ||  | ||||||||||||||||||||||||| ||  ||||  || |||||||||||    
T  16577435 caaagttgagccacatccgaaaag-ctcctattccaaagatcattcagcttccaccacctctcaacctccaatctaccgaaagaa 16577352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 33034672 - 33034716
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    ||||||||  ||||||||||||| ||||||||| |||||||||||    
T  33034672 aactgactttcgatctcgaatcagaagtgatcgacccaccagact 33034716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 1028 - 1207
Alignment:
Q  107 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtaca 202  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| ||||| ||    | || ||    
T  1028 aaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg-acccctcattcccagtcca 1126  T
Q  203 ccagagaaacacc-aaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccac 283  Q
    ||||||||||||| ||||||  |||||||| || ||||||||||||| |||||| ||||| |||||||| ||| ||||||||    
T  1127 ccagagaaacaccaaaatca-atcaaacaagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccac 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 35770 - 35995
Alignment:
Q  94 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc-- 191  Q
    ||||||||||| | ||||| |  ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||  ||||||| ||   |||||||      
T  35770 aaagcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagactatataaccaaattagctaggcacccct 35868  T
Q  192 --cccacggtacaccagagaaacacc-aaatcacgtcaaacaaa-atagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccaccgct 287  Q
      ||| |||||||||||||||| ||| |||| | |||||||||| || ||| ||||||  |||||||||||||| |||| |||| |||||||||||||      
T  35869 cgcccccggtacaccagagaaaaaccaaaattaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaa 35968  T
Q  288 aaccagcacacaaaaagtatgacgaaa 314  Q
    | ||||||||||| | ||| |||||||    
T  35969 agccagcacacaatatgtaagacgaaa 35995  T

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Target: scaffold0620 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 3885 - 3841
Alignment:
Q  122 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  3885 aactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 8200 - 8140
Alignment:
Q  106 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 166  Q
    |||||||||  |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  8200 caaacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 8140  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 284
Target Start/End: Complemental strand, 59688 - 59508
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccccca----cggtacac 203  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| |  ||  | ||||||||||||||||| ||    |||| |||    
T  59688 aacttgaactaaagaactgattgacgatctcgaatcaaaagtgattggttcaccagacatctgggtctaatcagaagggcacccctcacctccggttcac 59589  T
Q  204 cagagaaacacca-aatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaattaaccggcccacc 284  Q
    ||||||||||| | | ||| | ||||||| || ||| ||| ||||| ||||||||||||||||||||| |||  ||||||||    
T  59588 cagagaaacactatagtca-gccaaacaagattgcaactaaacaccaactcccgatctcaaagcaaaagtaattggcccacc 59508  T

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Target: scaffold0062; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 47162 - 47052
Alignment:
Q  108 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacac 203  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| | |||  | ||||||||||||||||    ||| |||| |||    
T  47162 aacttgaactaaagaactgatttacgatctcgaatcaaaagtgattggttcaccagacatcagggtctaatcagaagggcacccctcacccccggttcac 47063  T
Q  204 cagagaaacac 214  Q
    |||||||||||    
T  47062 cagagaaacac 47052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 282
Target Start/End: Complemental strand, 6658 - 6457
Alignment:
Q  77 accgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaa 176  Q
    ||||||||||  || |||||||| |||| ||||||||| |||||||||| ||| || |||| |||||||||| |||||   |||||||||| |||||  |    
T  6658 accgaaagaacacaaaaaaagccaaaaaccaaacttgagccaaagaactaactaccaatcttgaatcaaaagagatcgttgcaccagacttcaggactca 6559  T
Q  177 atcagaagggcacccc---ccacggtacaccagagaaacaccaaatcacgtcaaacaaaatagcagctagacaccgactcccgatctcaaagcaaaatta 273  Q
    | |||| |||||||||   || |||| ||||||| ||   |   |||    || |||| |  ||||||||||||| |||||| |||||||||||||| ||    
T  6558 accagatgggcaccccttacctcggtccaccagataatgcc---atc----cagacaagaatgcagctagacaccaactcccaatctcaaagcaaaagta 6466  T
Q  274 accggccca 282  Q
    ||| |||||    
T  6465 acctgccca 6457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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