View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9839A_low_64 (Length: 393)

Name: NF9839A_low_64
Description: NF9839A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9839A_low_64
NF9839A_low_64
[»] chr4 (49 HSPs)
chr4 (8-344)||(38157020-38157357)
chr4 (8-393)||(55017691-55018072)
chr4 (288-344)||(54534978-54535034)
chr4 (230-341)||(42978864-42978975)
chr4 (287-341)||(42889812-42889866)
chr4 (287-341)||(42977201-42977255)
chr4 (287-341)||(48711861-48711915)
chr4 (287-341)||(55948955-55949009)
chr4 (8-116)||(4906357-4906463)
chr4 (8-116)||(4932226-4932332)
chr4 (287-342)||(22309140-22309195)
chr4 (8-59)||(29757332-29757383)
chr4 (287-341)||(18597856-18597910)
chr4 (287-341)||(19994501-19994555)
chr4 (287-341)||(32082635-32082689)
chr4 (287-341)||(48713464-48713518)
chr4 (287-336)||(9561854-9561903)
chr4 (8-72)||(23702671-23702734)
chr4 (208-344)||(33607468-33607604)
chr4 (25-121)||(33607692-33607788)
chr4 (290-341)||(23702400-23702451)
chr4 (286-341)||(55019358-55019413)
chr4 (287-341)||(10337107-10337161)
chr4 (287-341)||(19996056-19996110)
chr4 (208-341)||(21354699-21354833)
chr4 (39-121)||(33609095-33609177)
chr4 (287-341)||(33609346-33609400)
chr4 (293-343)||(39665272-39665322)
chr4 (287-341)||(44251608-44251662)
chr4 (287-341)||(54123547-54123601)
chr4 (287-344)||(10338172-10338229)
chr4 (287-344)||(54536699-54536756)
chr4 (16-72)||(22674423-22674478)
chr4 (286-341)||(4906132-4906187)
chr4 (286-341)||(4932001-4932056)
chr4 (237-276)||(23800845-23800884)
chr4 (286-341)||(35785168-35785223)
chr4 (39-109)||(42225572-42225643)
chr4 (290-341)||(44253197-44253248)
chr4 (39-117)||(2671738-2671815)
chr4 (39-121)||(4284145-4284227)
chr4 (287-341)||(18597635-18597689)
chr4 (287-341)||(24919055-24919109)
chr4 (287-341)||(55947363-55947417)
chr4 (51-116)||(10337933-10337998)
chr4 (289-341)||(4907465-4907517)
chr4 (289-341)||(4933335-4933387)
chr4 (287-319)||(9563337-9563369)
chr4 (289-341)||(29756275-29756327)
[»] chr3 (37 HSPs)
chr3 (13-344)||(31017472-31017802)
chr3 (39-344)||(32615395-32615705)
chr3 (39-341)||(32558922-32559226)
chr3 (208-341)||(41081805-41081938)
chr3 (39-347)||(32613880-32614188)
chr3 (208-341)||(31795376-31795509)
chr3 (208-341)||(48566999-48567132)
chr3 (287-343)||(22942337-22942393)
chr3 (8-59)||(24613337-24613388)
chr3 (39-121)||(32641302-32641384)
chr3 (286-344)||(33781495-33781553)
chr3 (39-109)||(40499005-40499075)
chr3 (39-109)||(48568283-48568353)
chr3 (287-344)||(30700296-30700353)
chr3 (208-341)||(32559804-32559939)
chr3 (286-341)||(24613613-24613668)
chr3 (286-341)||(33780660-33780715)
chr3 (8-59)||(33781218-33781269)
chr3 (291-354)||(40499258-40499321)
chr3 (38-121)||(44458820-44458903)
chr3 (39-117)||(1677179-1677256)
chr3 (291-341)||(31796840-31796890)
chr3 (287-341)||(33732968-33733022)
chr3 (254-344)||(41879924-41880014)
chr3 (287-341)||(53529536-53529590)
chr3 (287-344)||(33734504-33734561)
chr3 (38-117)||(13645049-13645127)
chr3 (286-344)||(31200947-31201005)
chr3 (287-341)||(31656956-31657010)
chr3 (39-109)||(31796587-31796657)
chr3 (39-109)||(41083024-41083094)
chr3 (291-341)||(41083277-41083327)
chr3 (303-341)||(45981410-45981448)
chr3 (291-341)||(48568536-48568586)
chr3 (287-341)||(53527973-53528027)
chr3 (286-354)||(5377797-5377865)
chr3 (39-111)||(27361398-27361469)
[»] chr2 (53 HSPs)
chr2 (22-263)||(3751138-3751379)
chr2 (32-116)||(18224611-18224695)
chr2 (208-341)||(6844019-6844153)
chr2 (208-341)||(40304685-40304818)
chr2 (208-341)||(16143519-16143652)
chr2 (287-344)||(22053125-22053182)
chr2 (208-341)||(45492955-45493088)
chr2 (208-341)||(45500697-45500830)
chr2 (213-341)||(7317393-7317521)
chr2 (287-339)||(16142231-16142283)
chr2 (39-119)||(9661031-9661111)
chr2 (39-119)||(9661996-9662076)
chr2 (8-59)||(10344271-10344322)
chr2 (8-59)||(44820653-44820704)
chr2 (208-350)||(6842709-6842851)
chr2 (287-341)||(44465092-44465146)
chr2 (39-119)||(6843890-6843970)
chr2 (159-274)||(9662075-9662191)
chr2 (292-344)||(13947748-13947800)
chr2 (292-344)||(14088937-14088989)
chr2 (208-353)||(44097274-44097421)
chr2 (293-344)||(37393889-37393940)
chr2 (287-341)||(38730064-38730119)
chr2 (39-109)||(6842909-6842979)
chr2 (287-341)||(28563379-28563433)
chr2 (287-341)||(34591728-34591782)
chr2 (287-341)||(35588130-35588184)
chr2 (291-341)||(40303296-40303346)
chr2 (39-109)||(40303529-40303599)
chr2 (287-341)||(44421344-44421398)
chr2 (291-341)||(45499308-45499358)
chr2 (39-109)||(45499541-45499611)
chr2 (286-355)||(44820931-44821000)
chr2 (290-341)||(8803306-8803357)
chr2 (293-343)||(9109006-9109057)
chr2 (286-341)||(22054337-22054392)
chr2 (286-341)||(22060161-22060216)
chr2 (290-341)||(22060485-22060536)
chr2 (286-341)||(40127243-40127298)
chr2 (16-59)||(42929216-42929259)
chr2 (286-341)||(43516401-43516456)
chr2 (294-341)||(44463569-44463616)
chr2 (287-341)||(1841757-1841811)
chr2 (287-341)||(10343991-10344045)
chr2 (286-344)||(10345148-10345206)
chr2 (39-121)||(31558173-31558255)
chr2 (297-341)||(1840160-1840204)
chr2 (288-344)||(18161046-18161102)
chr2 (303-347)||(20588477-20588521)
chr2 (69-121)||(22053348-22053400)
chr2 (286-326)||(28563956-28563996)
chr2 (186-238)||(31559458-31559510)
chr2 (39-119)||(44095539-44095619)
[»] chr7 (38 HSPs)
chr7 (12-109)||(28556461-28556558)
chr7 (12-109)||(706959-707056)
chr7 (12-109)||(33823978-33824075)
chr7 (16-109)||(707899-707995)
chr7 (208-341)||(12178486-12178619)
chr7 (208-341)||(46246498-46246631)
chr7 (287-344)||(11671288-11671345)
chr7 (287-344)||(40028457-40028514)
chr7 (286-341)||(41384152-41384207)
chr7 (287-346)||(45277969-45278028)
chr7 (287-341)||(37133651-37133705)
chr7 (287-341)||(40030031-40030085)
chr7 (39-109)||(46245358-46245428)
chr7 (12-109)||(39787895-39787992)
chr7 (287-339)||(12180641-12180693)
chr7 (303-355)||(21016224-21016276)
chr7 (297-341)||(31734766-31734810)
chr7 (290-341)||(3704401-3704452)
chr7 (286-341)||(41385810-41385865)
chr7 (287-341)||(8230073-8230127)
chr7 (287-341)||(14774516-14774570)
chr7 (287-341)||(15224969-15225023)
chr7 (287-341)||(21715075-21715129)
chr7 (287-341)||(21716621-21716675)
chr7 (287-341)||(31392061-31392115)
chr7 (287-341)||(31393661-31393715)
chr7 (287-341)||(37131838-37131892)
chr7 (291-341)||(46245125-46245175)
chr7 (208-341)||(11669844-11669977)
chr7 (286-322)||(11748966-11749002)
chr7 (286-341)||(41591518-41591573)
chr7 (39-117)||(5975440-5975517)
chr7 (287-341)||(8231636-8231690)
chr7 (287-341)||(13420288-13420342)
chr7 (287-341)||(15135382-15135436)
chr7 (39-109)||(15135614-15135684)
chr7 (292-341)||(15136946-15136995)
chr7 (297-341)||(37350216-37350260)
[»] chr8 (32 HSPs)
chr8 (12-109)||(17706381-17706478)
chr8 (12-109)||(36900923-36901020)
chr8 (16-109)||(36900115-36900209)
chr8 (16-109)||(17707197-17707291)
chr8 (287-341)||(3158039-3158093)
chr8 (293-341)||(15279641-15279689)
chr8 (293-341)||(15460010-15460058)
chr8 (8-59)||(358261-358312)
chr8 (294-341)||(1650219-1650266)
chr8 (39-122)||(45448243-45448326)
chr8 (287-341)||(22714051-22714105)
chr8 (287-341)||(25265907-25265961)
chr8 (287-337)||(26719392-26719442)
chr8 (287-341)||(39884619-39884673)
chr8 (287-341)||(39886078-39886132)
chr8 (293-341)||(5461937-5461985)
chr8 (8-56)||(21142762-21142810)
chr8 (287-341)||(25264343-25264397)
chr8 (287-341)||(33295447-33295501)
chr8 (296-333)||(2552763-2552800)
chr8 (289-341)||(359318-359370)
chr8 (286-341)||(357980-358035)
chr8 (286-341)||(17707449-17707504)
chr8 (286-341)||(21142482-21142537)
chr8 (42-109)||(31917215-31917282)
chr8 (208-321)||(27339104-27339222)
chr8 (292-341)||(45448499-45448548)
chr8 (289-341)||(2552410-2552462)
chr8 (289-341)||(26720252-26720304)
chr8 (286-354)||(36899888-36899956)
chr8 (293-341)||(37963277-37963325)
chr8 (179-255)||(44690109-44690185)
[»] chr1 (41 HSPs)
chr1 (26-259)||(7384634-7384874)
chr1 (208-341)||(24437077-24437210)
chr1 (287-344)||(50317052-50317109)
chr1 (287-341)||(7185858-7185912)
chr1 (208-338)||(22684073-22684203)
chr1 (208-341)||(50315321-50315454)
chr1 (287-339)||(24438950-24439002)
chr1 (8-72)||(42301342-42301405)
chr1 (286-349)||(8322516-8322579)
chr1 (286-341)||(9626471-9626526)
chr1 (287-341)||(7184326-7184380)
chr1 (287-341)||(7653689-7653743)
chr1 (287-341)||(16673258-16673312)
chr1 (287-341)||(36145347-36145401)
chr1 (287-344)||(13211114-13211171)
chr1 (286-351)||(31809982-31810047)
chr1 (287-348)||(33259374-33259435)
chr1 (287-348)||(33279533-33279594)
chr1 (296-344)||(7001198-7001246)
chr1 (297-341)||(44268891-44268935)
chr1 (8-59)||(9626754-9626805)
chr1 (287-341)||(7655266-7655320)
chr1 (287-341)||(16592024-16592078)
chr1 (287-341)||(28920657-28920711)
chr1 (287-341)||(31321012-31321066)
chr1 (39-109)||(46604674-46604744)
chr1 (287-344)||(14095718-14095775)
chr1 (37-121)||(50315542-50315627)
chr1 (286-341)||(8323440-8323495)
chr1 (286-341)||(31815771-31815826)
chr1 (39-109)||(28361007-28361077)
chr1 (287-341)||(33257884-33257938)
chr1 (287-341)||(33278056-33278110)
chr1 (287-341)||(41668276-41668330)
chr1 (287-341)||(46604442-46604496)
chr1 (287-336)||(13209582-13209631)
chr1 (39-116)||(27524497-27524573)
chr1 (297-341)||(10708033-10708077)
chr1 (289-341)||(26734429-26734481)
chr1 (297-341)||(33981507-33981551)
chr1 (290-346)||(44269079-44269135)
[»] chr6 (14 HSPs)
chr6 (208-351)||(1443410-1443553)
chr6 (8-72)||(20773186-20773249)
chr6 (287-341)||(1256717-1256771)
chr6 (8-116)||(842414-842520)
chr6 (287-341)||(1258442-1258496)
chr6 (287-341)||(10707679-10707733)
chr6 (290-346)||(8745430-8745486)
chr6 (286-341)||(11065655-11065710)
chr6 (286-341)||(19402123-19402178)
chr6 (38-121)||(28049207-28049290)
chr6 (287-341)||(8752802-8752856)
chr6 (287-345)||(33469802-33469860)
chr6 (286-341)||(842189-842244)
chr6 (287-341)||(19084122-19084176)
[»] chr5 (23 HSPs)
chr5 (287-341)||(16308568-16308622)
chr5 (287-341)||(27756787-27756841)
chr5 (287-340)||(28592081-28592134)
chr5 (287-348)||(30332279-30332340)
chr5 (208-341)||(38626093-38626226)
chr5 (8-59)||(9672073-9672124)
chr5 (287-341)||(1418938-1418992)
chr5 (39-109)||(38624952-38625022)
chr5 (287-341)||(17555005-17555060)
chr5 (294-341)||(18201354-18201401)
chr5 (294-341)||(39103420-39103467)
chr5 (39-109)||(11772453-11772523)
chr5 (287-341)||(25916280-25916334)
chr5 (291-341)||(38624719-38624769)
chr5 (288-321)||(28592421-28592454)
chr5 (287-346)||(8874276-8874335)
chr5 (286-341)||(9672352-9672407)
chr5 (294-341)||(16310108-16310155)
chr5 (287-341)||(8872523-8872577)
chr5 (287-341)||(28803659-28803713)
chr5 (287-341)||(36619547-36619601)
chr5 (45-121)||(28592301-28592378)
chr5 (39-119)||(33083904-33083984)
[»] scaffold0060 (1 HSPs)
scaffold0060 (8-72)||(12051-12117)
[»] scaffold1176 (2 HSPs)
scaffold1176 (175-341)||(2054-2221)
scaffold1176 (53-121)||(2275-2343)
[»] scaffold0512 (1 HSPs)
scaffold0512 (287-328)||(10126-10167)
[»] scaffold0672 (1 HSPs)
scaffold0672 (302-346)||(545-589)
[»] scaffold0280 (1 HSPs)
scaffold0280 (215-341)||(12134-12261)
[»] scaffold0129 (1 HSPs)
scaffold0129 (286-341)||(4258-4313)
[»] scaffold1118 (2 HSPs)
scaffold1118 (290-336)||(2420-2466)
scaffold1118 (53-121)||(2636-2704)
[»] scaffold0633 (1 HSPs)
scaffold0633 (287-341)||(6896-6950)
[»] scaffold0524 (1 HSPs)
scaffold0524 (303-345)||(7697-7739)


Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 344
Target Start/End: Complemental strand, 38157357 - 38157020
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38157357 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtt 38157258  T
Q  108 ttaatccctcaaattactcatttatcattctgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatca 207  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38157257 ttaatccctcaaattactcatttatcattctgtctttccacgtaagccacaaacgccatatcagcctttgccacgtcggcctccgtttgccagcacatca 38157158  T
Q  208 tt-ttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaa 306  Q
    || |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||        |||||||||||||||| ||||    
T  38157157 tttttttaacagaagttgatgttagagaccaaaaccaaaaaattaacaacttacaaggtttgttttagaacaaaaaaaattacagggacgaaaaccaaaa 38157058  T
Q  307 acacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  38157057 acacgcgaacttacagggatgatttacatatttaaacc 38157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 8 - 393
Target Start/End: Complemental strand, 55018072 - 55017691
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55018072 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatgtgcgtttttggtt 55017973  T
Q  108 ttaatccctcaaattactcatttatcattctgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatca 207  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||||||    
T  55017972 ttaatccctcaaattactcatttatcattctgtctttccacgtaagccacaaacaccatatcagcctttgccacgtcggcgtccgtttgccagcacatca 55017873  T
Q  208 tt-ttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaac-aaaa 305  Q
    || ||||||||      || ||||||||||||||||||||||||||||||||||||| ||| |||||||||        ||||||  |||||||| ||||    
T  55017872 tttttttaaca------gacgttagggaccaaaaccaataaattaacaacttacaaggtttattttagaacaaaaaaaattacagaaacgaaaacaaaaa 55017779  T
Q  306 aacacgcgaacttacaaggacgatttacatatttaaaccatttatttattaccatagacaacaagatagaagggatccacaaacatga 393  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||    
T  55017778 aacacgcgaacttacagggacgatttacatatttaaaccatttatttattacgatagacaacaggatagaagggatccacgaacatga 55017691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 54535034 - 54534978
Alignment:
Q  288 acagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  54535034 acagggacgaaaaccaaaaacacgcgaacttacatggacgatttacatatttaaacc 54534978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 341
Target Start/End: Original strand, 42978864 - 42978975
Alignment:
Q  230 agggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaacacgcgaacttacaaggacgat 329  Q
    |||||| |||| ||| ||||||  ||||||||||  ||||||||||||         ||||||||||||||| |||||||||| || |||||||||||||    
T  42978864 agggacgaaaagcaaaaaattattaacttacaaggattgttttagaacaaaaaaagatacagggacgaaaaccaaaaacacgccaaattacaaggacgat 42978963  T
Q  330 ttacatatttaa 341  Q
    ||||||||||||    
T  42978964 ttacatatttaa 42978975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 42889812 - 42889866
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  42889812 tacaaggacgaaaacaaaaaacacgtgaacttacagggacgatttacatatttaa 42889866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 42977255 - 42977201
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  42977255 tacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 42977201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 48711915 - 48711861
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  48711915 tacaaggacgaaaacaaaaaacacgcaaaattacaaggacgatttacatatttaa 48711861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 55948955 - 55949009
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  55948955 tacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 55949009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 4906463 - 4906357
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtt 107  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||| |||| | ||| |||||| ||   |||| |||||||| ||    
T  4906463 caatgagggaagaagaagaataagatcttgattttaaatatgaaattttgat-tttacgt-ttttgattttagtccctgtggtaatttacgtttttgatt 4906366  T
Q  108 ttaatccct 116  Q
    ||| |||||    
T  4906365 ttagtccct 4906357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 4932332 - 4932226
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtt 107  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||| |||| | ||| |||||| ||   |||| |||||||| ||    
T  4932332 caatgagggaagaagaagaataagatcttgattttaaatatgaaattttgat-tttacgt-ttttaattttagtccctgtggtaatttacgtttttgatt 4932235  T
Q  108 ttaatccct 116  Q
    ||| |||||    
T  4932234 ttagtccct 4932226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 22309140 - 22309195
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaa 342  Q
    ||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||    
T  22309140 tacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaaa 22309195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 29757332 - 29757383
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  29757332 caatgagggaagaagaagaataagatcttgattttaaatatgaaattttgat 29757383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 18597856 - 18597910
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  18597856 tacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 18597910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 19994555 - 19994501
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  19994555 tacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 19994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 32082635 - 32082689
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  32082635 tacagggacgaaaaccaaaaacacgccaaattacacggacgatttacatatttaa 32082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 48713464 - 48713518
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  48713464 tacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 48713518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 9561903 - 9561854
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacata 336  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  9561903 tacagagacgaaaaccaaaaacacgcgaacttacagggacgatttacata 9561854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 23702734 - 23702671
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtatttt 72  Q
    ||||||||||| |||||||| || ||||||||||||||| |||||||||||| ||||||| ||||    
T  23702734 caatgagggaaaaagaagaataagatcttgattttaaatctgaaattttgat-tttacgtttttt 23702671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 344
Target Start/End: Complemental strand, 33607604 - 33607468
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||| ||||||| ||| | ||||||||| |||||||| |  || |||||||||| | ||||||||||||          |||| |||||||||| |||||    
T  33607604 ttttctaacagatgttaacgttagggactaaaaccaaaatgtttacaacttacagggtttgttttagaaaaaaaaaagatacaaggacgaaaaccaaaaa 33607505  T
Q  308 cacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||  |||  ||||||||||||||||    
T  33607504 cacgcgaacttacagagaccttttacatatttaaacc 33607468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 33607788 - 33607692
Alignment:
Q  25 gaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||| |||| | |||||||||| ||||||| || ||||||| ||||||||||| ||||| || |  ||| |||||||||||||  ||||||||||    
T  33607788 gaagaagatctagtttttaaattttaaatttttatgtttacgttttttcaatttcatccctctgcaattttacgtttttggttttggtccctcaaat 33607692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 23702451 - 23702400
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||  |||||||||||||||||  |||||||||||||    
T  23702451 agggacgaaaacaaaaaatgcgcgaacttacaaggaccttttacatatttaa 23702400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 55019358 - 55019413
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||||||||||  |||||| |||||||||| ||||||||||||||    
T  55019358 ttacagggaagaaaacaaaaaatgcgcgaaattacaaggaccatttacatatttaa 55019413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 10337161 - 10337107
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  10337161 tacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 10337107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 19996056 - 19996110
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  19996056 tacagggaccaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 19996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 21354699 - 21354833
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||| |||| || | |||| |||| |||||||| || ||||||||||||| | |||||||||||||         ||||||||||||||  |||||    
T  21354699 ttttttaatagaaattaacgttaaggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaa 21354798  T
Q  308 cacgcg-aacttacaaggacgatttacatatttaa 341  Q
    |||||| |||||||| |||   |||||||||||||    
T  21354799 cacgcgaaacttacagggatcttttacatatttaa 21354833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 33609095 - 33609177
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||||||| |||||||||| || | || ||||||||||| ||||| || |  |||||||||||||||||  ||||||||||    
T  33609095 ttttaaattttaaattttgatgttcatgttttttcaatttcatccctttgcaattttgcgtttttggttttggtccctcaaat 33609177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 33609346 - 33609400
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  33609346 tacaaggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 33609400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 39665322 - 39665272
Alignment:
Q  293 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaac 343  Q
    |||||||||||||||  |||||||||||| |||| ||||||||||||||||    
T  39665322 gacgaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaaac 39665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 44251662 - 44251608
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  44251662 tacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 44251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 54123547 - 54123601
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| ||||||| || || ||||| |||||||||||||||||||    
T  54123547 tacagggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaa 54123601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 10338172 - 10338229
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||| ||| ||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  10338172 tacagagacaaaaaccaaaaacacgcaaaattacatggacgatttacatatttaaacc 10338229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 54536699 - 54536756
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||| |||| ||||| || |||||||||| ||||| ||||||||||||||||||||||    
T  54536699 tacatggacaaaaaccaagaacacgcgaatttacagggacgatttacatatttaaacc 54536756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 22674478 - 22674423
Alignment:
Q  16 gaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtatttt 72  Q
    |||||||||||| || ||||||||||||||| |||||||||||| ||||||| ||||    
T  22674478 gaagaagaagaataagatcttgattttaaatctgaaattttgat-tttacgtttttt 22674423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 4906187 - 4906132
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4906187 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4906132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 4932056 - 4932001
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4932056 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4932001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 276
Target Start/End: Complemental strand, 23800884 - 23800845
Alignment:
Q  237 aaaaccaataaattaacaacttacaagatttgttttagaa 276  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  23800884 aaaaccaaaaaattaacaacttacgagatttgttttagaa 23800845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 35785223 - 35785168
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||| ||||||||||| ||||||||||||| |||   |||||||||||||    
T  35785223 ttacagggacaaaaacaaaaaatacgcgaacttacatggatcttttacatatttaa 35785168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 42225643 - 42225572
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtatttt-caatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| ||||||| || ||||||| |||| ||| ||||||||| || | ||||||||||||||||||    
T  42225643 ttttaaatttcaaattttaatgtttacgtttttttcaaattcgtccctctgcaaatttgcgtttttggtttt 42225572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 44253197 - 44253248
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||| |||||||||| || ||| | |||||||||||||||||||    
T  44253197 agggacgaaaaccaaaaacacgccaaattaaagggacgatttacatatttaa 44253248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 2671815 - 2671738
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctc 117  Q
    ||||||| || ||||||||||  ||| || |||| | ||||||||||||| | ||||||||||||||||||| ||||||    
T  2671815 ttttaaaattcaaattttgatgattatgtttttt-attttcgtccctatgtaaatttgcgtttttggttttagtccctc 2671738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 4284145 - 4284227
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||||||| ||||| |||| ||||||| |||||||||||   ||| || |  |||||||||||||||||  ||||||||||    
T  4284145 ttttaaatttcaaattatgatgtttacgttttttcaatttcactcctctgcaattttgcgtttttggttttggtccctcaaat 4284227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 18597689 - 18597635
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||  || ||||| |||||||||| ||||||||    
T  18597689 tacagggacgaaaaccaaaaacacggcaaattacatggacgatttaaatatttaa 18597635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 24919109 - 24919055
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||| ||||| || |||||||||| |||||||| | |||||||||||||||||    
T  24919109 tacaggaacgaagaccaaaaacacgcaaacttacaggtacgatttacatatttaa 24919055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 55947417 - 55947363
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| ||||| |||  || ||||| |||||||||||||||||||    
T  55947417 tacagggacgaaaaccaaaaatacgtcaaattacagggacgatttacatatttaa 55947363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 10337933 - 10337998
Alignment:
Q  51 aattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccct 116  Q
    |||||| ||||||| || |||| |||||||||||| || || ||| ||||||||||||| ||||||    
T  10337933 aattttcatatttaggtgtttttaatttcgtccctctgtaccttttcgtttttggttttgatccct 10337998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 4907465 - 4907517
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4907465 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4907517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 4933335 - 4933387
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4933335 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4933387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Original strand, 9563337 - 9563369
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaactta 319  Q
    ||||||||||||||||||||| |||||||||||    
T  9563337 tacagggacgaaaacaaaaaatacgcgaactta 9563369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 29756327 - 29756275
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  29756327 cagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 29756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 13 - 344
Target Start/End: Original strand, 31017472 - 31017802
Alignment:
Q  13 agggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaat 112  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||| ||||  |    
T  31017472 agggatgaagaagaagaagatcttgtttttaaatttgaaattttgatatttaggttttttcaatttcgtccttatgaacatttgcgtttttgattttggt 31017571  T
Q  113 ccctcaaattactcatttatcattctgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatc-atttt 211  Q
    |||||||| ||| || ||||||||||     ||||||||||||||||||| ||| ||| |||||| ||| | ||||| |||||||| |||||||  ||||    
T  31017572 ccctcaaactacccacttatcattctatcagtccacgtaagccacaaacgacatctcaacctttgtcacatcggccttcgtttgccagcacatcgttttt 31017671  T
Q  212 ttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagat-ttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaacac 310  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||| |||| || |||||||||         |||| | ||||||||  |||||||    
T  31017672 ttaacagaagttgacgttagggaccaaaatcaaaaaattaacaacttac-agatattattttagaacaaaaaaaa-tacaagaacgaaaac-caaaacac 31017768  T
Q  311 gcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||||  |||||||||||||||||||||    
T  31017769 gcgaacttacacagacgatttacatatttaaacc 31017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 344
Target Start/End: Original strand, 32615395 - 32615705
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccct-caaattactcatttatcat-- 135  Q
    |||||||||| ||| |||| | ||||||| |||||||||||||||||||| | ||||||||||||||||||  |||||  ||| || ||| |||||||      
T  32615395 ttttaaatttcaaaatttggtgtttacgttttttcaatttcgtccctatgcaaatttgcgtttttggttttggtccctaaaaagtagtcacttatcatca 32615494  T
Q  136 tctgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggc-acatcattttttaacagaagttgatgttaggga 234  Q
    ||||     ||||||||||||| |||||||  |||||||| ||||||   |  |||||||||| || || |  ||||||||| |||||| | ||||||||    
T  32615495 tctgtcaggccacgtaagccactaacgccaactcagccttcgccacgcgtgtttccgtttgccagcaacgtgtttttttaacggaagtttacgttaggga 32615594  T
Q  235 ccaaaaccaataaattaacaacttacaagatttgttttagaac-nnnnnnnnttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttac 333  Q
    | |||| ||| || ||||||||||||| |||||||||||||||         |||||||||| ||||||||||||||||||||||||| ||||  |||||    
T  32615595 ctaaaatcaaaaagttaacaacttacatgatttgttttagaacaaaaaaaagttacagggacaaaaacaaaaaacacgcgaacttacagggaccttttac 32615694  T
Q  334 atatttaaacc 344  Q
    |||||||||||    
T  32615695 atatttaaacc 32615705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 341
Target Start/End: Complemental strand, 32559226 - 32558922
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat-tactcatttatcattc 137  Q
    |||||||||| ||| |||| | ||||| |  |||||||||||||||| || | ||||||||||||| ||||  ||||| |||  || ||| ||||||| |    
T  32559226 ttttaaatttcaaaatttggtgtttacattatttcaatttcgtccctctgtaaatttgcgtttttgattttggtccctaaaaaatagtcacttatcat-c 32559128  T
Q  138 tgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatttttt-aacagaagttgatgttagggacc 236  Q
    ||     ||||||||||||| |||||||  |||||||| |||| |   |  |||||||||| |||   |||||||| |||||||||| | |||||||||     
T  32559127 tgtcaggccacgtaagccactaacgccaactcagccttcgccatgcgtgtttccgtttgccagcaacgcattttttgaacagaagttaacgttagggact 32559028  T
Q  237 aaaaccaataaattaacaa-cttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacat 335  Q
    |||||||| || ||||||| ||||||   |||||||| ||||        |||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  32559027 aaaaccaaaaagttaacaaacttacagagtttgttttcgaacaaaaaaagttacagggacgaaaacaaaaaacacgcgaacttacagggaccttttacat 32558928  T
Q  336 atttaa 341  Q
    ||||||    
T  32558927 atttaa 32558922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 41081938 - 41081805
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||||||||||||| |||||    
T  41081938 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 41081839  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| ||||  |||||||||||||    
T  41081838 cacgcgaacttacagggaccttttacatatttaa 41081805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 347
Target Start/End: Complemental strand, 32614188 - 32613880
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccct-caaattactcatttatcattc 137  Q
    |||||||||| ||| |||| | ||||| |  ||||||||||||||||||| | ||||||||||||||||||  |||||  ||| || | | ||||||||     
T  32614188 ttttaaatttcaaaatttggtgtttacattatttcaatttcgtccctatgcaaatttgcgtttttggttttggtccctaaaaaatagtaacttatcattg 32614089  T
Q  138 tgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggc-acatcattttttaacagaagttgatgttagggacc 236  Q
    | |    |||||||| ||||  ||||||  |||||||| |||| |   |  |||||||||| || |||   ||||| |||||||||| | |||||||||     
T  32614088 tcc--ggccacgtaaaccactgacgccaactcagccttcgccatgcgtgtttccgtttgccagcaacacgttttttgaacagaagttaacgttagggact 32613991  T
Q  237 aaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaacacgcgaac-ttacaaggacgatttacat 335  Q
    |||||||| || ||||||||||||| | ||| |||||||||         ||||||||||||||| |||||||||||||| ||||||||||  |||||||    
T  32613990 aaaaccaaaaagttaacaacttacagggtttattttagaacaaaaaaac-tacagggacgaaaaccaaaaacacgcgaactttacaaggaccttttacat 32613892  T
Q  336 atttaaaccatt 347  Q
    |||||| |||||    
T  32613891 atttaagccatt 32613880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 31795509 - 31795376
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||||| ||||||| |||||    
T  31795509 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggccgaaaaccaaaaa 31795410  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| ||||  ||||| |||||||    
T  31795409 cacgcgaacttacagggaccttttacgtatttaa 31795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 48567132 - 48566999
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||| ||||||||| |||||    
T  48567132 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagtgacgaaaaccaaaaa 48567033  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| |||||||| ||||  |||||||||||||    
T  48567032 cacgcaaacttacagggaccttttacatatttaa 48566999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 22942393 - 22942337
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaac 343  Q
    |||||||| |||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  22942393 tacagggatgaaaaccaaaaacaagcgaacttacagggacgatttacatatttaaac 22942337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 24613337 - 24613388
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  24613337 caatgagggaagaagaagaataagatcttgattttaaatatgaaattttgat 24613388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 32641384 - 32641302
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||||||| |||||||||| ||||||| ||||||||||| ||||| || |  |||||||||||| ||||  ||||||||||    
T  32641384 ttttaaattttaaattttgatgtttacgttttttcaatttcatccctctgcaattttgcgtttttgattttggtccctcaaat 32641302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 33781495 - 33781553
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||| ||||||||||||||||| |||||||||||| ||||  ||||||||||||||||    
T  33781495 ttacaaggacgaaaacaaaaaacgcgcgaacttacagggaccttttacatatttaaacc 33781553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 40499005 - 40499075
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || ||| |||||||||||||    
T  40499005 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 40499075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 48568283 - 48568353
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || ||| |||||||||||||    
T  48568283 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 48568353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 30700353 - 30700296
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||| |||||||||| ||||||||||||||||| |  |||||||||||||||||||||    
T  30700353 tacaaggacgaaaaccaaaaacacgcgaacttaaagagacgatttacatatttaaacc 30700296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 32559804 - 32559939
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnn--ttacagggacgaaaacaaaa 305  Q
    ||||||||| |||||| | |||| | || ||||| || || ||||||||||||||| |||||||||||||          ||||||||| ||||| ||||    
T  32559804 ttttttaacggaagtttacgttatgaactaaaactaaaaagttaacaacttacaaggtttgttttagaacaaaaaaaaagttacagggatgaaaataaaa 32559903  T
Q  306 aacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||  |||  |||||||||||||    
T  32559904 aacacgcgaacttacagagaccttttacatatttaa 32559939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 24613613 - 24613668
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||  |||||||||||| ||||  |||||||||||||    
T  24613613 ttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 24613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 33780715 - 33780660
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||||||||| ||||||||||||| ||||  ||||||| |||||    
T  33780715 ttacagggacgaaaacaaaaaatacgcgaacttacagggacattttacatttttaa 33780660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 33781218 - 33781269
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||||||||||    
T  33781218 caatgagggaggaagaagaataagatcttgattttaaatctgaaattttgat 33781269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 40499258 - 40499321
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttat 354  Q
    ||||||||||| ||||||||||||||||||| ||||  ||||||||||||| || | |||||||    
T  40499258 gggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaagccttatatttat 40499321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 44458903 - 44458820
Alignment:
Q  38 attttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    ||||||||||| ||||||| |||||||||| |||| |||||| ||||| || |  |||||||||||| ||||  ||||||||||    
T  44458903 attttaaatttcaaatttttatatttacgtttttttaatttcatccctctgcaattttgcgtttttgattttggtccctcaaat 44458820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 1677256 - 1677179
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctc 117  Q
    ||||||| || ||||||||||  |||||| |||| | ||||||||||||| | ||||||||||||||||||| ||||||    
T  1677256 ttttaaaattcaaattttgatgattacgtttttt-attttcgtccctatgtaaatttgcgtttttggttttagtccctc 1677179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 31796840 - 31796890
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  31796840 gggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 31796890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 33733022 - 33732968
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||| |||||||| |||||||||| || ||||| |||||||||||||||||||    
T  33733022 tacaggaacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 33732968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 41880014 - 41879924
Alignment:
Q  254 aacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||| |||||||||||||         ||||| ||||||||| |||||||| ||||||||||   ||||||||||||||||||||    
T  41880014 aacttacaaggtttgttttagaacaaaaaaagatacagagacgaaaaccaaaaacacacgaacttacagaaacgatttacatatttaaacc 41879924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 53529536 - 53529590
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| ||||| |||| || ||||| |||||||||||||||||||    
T  53529536 tacagggacgaaaactaaaaatacgccaaattacagggacgatttacatatttaa 53529590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 33734504 - 33734561
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||| || ||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  33734504 tacaggaaccaaaaccaaaaacacgctaaattacagggacgatttacatatttaaacc 33734561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 13645127 - 13645049
Alignment:
Q  38 attttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctc 117  Q
    |||||| |||| ||||||||||  ||| || |||| | ||||||||||||| | ||||||||||||||||||| ||||||    
T  13645127 attttacatttcaaattttgattattatgtttttt-attttcgtccctatgtaaatttgcgtttttggttttagtccctc 13645049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 31200947 - 31201005
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||  |||||||||||  ||||||||||||  ||| |||||||||||||||||    
T  31200947 ttacagggatcaaaacaaaaaatgcgcgaacttacagagaccatttacatatttaaacc 31201005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 31657010 - 31656956
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| ||||||| || || ||||| |||||||||||||||||||    
T  31657010 tacaaggacgaaaaccaaaaacatgccaaattacagggacgatttacatatttaa 31656956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 31796587 - 31796657
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| ||||||  | |||| ||||||||||||||| || ||| | |||||||||||    
T  31796587 ttttaaatttcaaattttgttatttagttgtttttaatttcgtccctatgtaccttttcctttttggtttt 31796657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 41083024 - 41083094
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || |||   |||||||||||    
T  41083024 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtacctttttctttttggtttt 41083094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 41083277 - 41083327
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| |||||||||| |||||||| ||||  |||||||||||||    
T  41083277 gggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 41083327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 341
Target Start/End: Complemental strand, 45981448 - 45981410
Alignment:
Q  303 aaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  45981448 aaaaacacgcgaaattacaaggacgttttacatatttaa 45981410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 48568536 - 48568586
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| |||||||||||||||||||  |||  |||||||||||||    
T  48568536 gggacgaaaaccaaaaacacgcgaacttacagagaccttttacatatttaa 48568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 53528027 - 53527973
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||| | |||||||||||| ||||||    
T  53528027 tacagggacgaaaaccaaaaacacgccaaattaaagggacgatttacacatttaa 53527973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 5377865 - 5377797
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttat 354  Q
    |||||||||| |||||||||||  ||| || ||||| ||||  ||||| ||||||| ||||||||||||    
T  5377865 ttacagggactaaaacaaaaaatgcgccaatttacagggaccttttacttatttaagccatttatttat 5377797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 27361469 - 27361398
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaa 111  Q
    ||||||| || ||| ||||||||||| || |||| |||||| |||||||| | ||||| ||||||||||||||    
T  27361469 ttttaaaattcaaaatttgatatttaggtttttt-aatttcatccctatgtaaatttgtgtttttggttttaa 27361398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 22 - 263
Target Start/End: Original strand, 3751138 - 3751379
Alignment:
Q  22 gaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    ||||||||| |||||| |||| |||||||||||||||||||| ||  |||||||||||||| ||||| |||||||| ||||||||||   || ||||||     
T  3751138 gaagaagaagatcttgtttttgaatttgaaattttgatatttgcggtttttcaatttcgtctctatgtacatttgcatttttggtttgg-tctctcaaac 3751236  T
Q  122 tactcatttatcattctgcatttccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcatttt-ttaacagaa 220  Q
    |||| | | |||||||||    ||||| |||||||| |||| ||| |||||||| |||||||  ||||| ||||||| |||||||||||| |||||||||    
T  3751237 tactaactgatcattctgttagtccacataagccactaacgtcatctcagccttcgccacgtcagcctctgtttgccagcacatcatttttttaacagaa 3751336  T
Q  221 gttgatgttagggaccaaaaccaataaattaacaacttacaag 263  Q
    ||||| |||| ||| ||||||||||||  ||||||||||||||    
T  3751337 gttgacgttatggatcaaaaccaataaggtaacaacttacaag 3751379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 18224611 - 18224695
Alignment:
Q  32 atcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccct 116  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||  |||| |||||||| |||||||||||| ||||||    
T  18224611 atcttgtttttaaatttaaaattttgatatttacgttttttcaatttcgtttctataaacatttgagtttttggttttcatccct 18224695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 6844019 - 6844153
Alignment:
Q  208 ttttttaacagaa-gttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaa 306  Q
    ||||||||||||| ||| | ||||||||| |||||||| ||  |||||||||||||| |||||||||||||         |||| ||| |||||| ||||    
T  6844019 ttttttaacagaaagttaacgttagggactaaaaccaaaaagctaacaacttacaaggtttgttttagaacaaaaaaagatacaaggatgaaaaccaaaa 6844118  T
Q  307 acacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||  |||||||||||||    
T  6844119 acacgcgaacttacaaggaccttttacatatttaa 6844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 40304685 - 40304818
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||||||||||||| |||||    
T  40304685 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 40304784  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| ||||  |||||||||||||    
T  40304785 cacgcgaacttacagggaccttttacatatttaa 40304818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 16143519 - 16143652
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||| | ||||||||| |||||||| || ||||||||||||| | |||||||||||||         ||||||||||||||  |||||    
T  16143519 ttttttaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaatcaaaaa 16143618  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| | |||||  ||||  |||||||||||||    
T  16143619 cacgcaagcttacggggaccttttacatatttaa 16143652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 22053182 - 22053125
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  22053182 tacagggacgaaaacaaaaaacacgcgaacttacaaagaccttttacatatttaaacc 22053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 45492955 - 45493088
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||||||||||||| |||||    
T  45492955 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 45493054  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| ||||| ||||  |||||||||||||    
T  45493055 cacgcgaatttacagggaccttttacatatttaa 45493088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 45500697 - 45500830
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||||||||||||| |||||    
T  45500697 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 45500796  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| ||||| ||||  |||||||||||||    
T  45500797 cacgcgaatttacagggaccttttacatatttaa 45500830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 341
Target Start/End: Complemental strand, 7317521 - 7317393
Alignment:
Q  213 taacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaacacgc 312  Q
    ||||||||||| |  ||||||||||||||||| || ||||||||||| | | |||||||||||||         |||| |||||||||| ||||||||||    
T  7317521 taacagaagttaacattagggaccaaaaccaaaaagttaacaacttatagggtttgttttagaacaaaaaaagatacaaggacgaaaaccaaaaacacgc 7317422  T
Q  313 gaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| |||   |||||||||||||    
T  7317421 gaacttacagggatcttttacatatttaa 7317393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 16142283 - 16142231
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattt 339  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  16142283 tacagagacgaaaaccaaaaacacgcgaacttacaaggacgatttacatattt 16142231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 9661111 - 9661031
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaa 119  Q
    |||||||||| ||||||||||  |||||| |||||| ||||||||||||| | ||||||| ||||||||||  ||||||||    
T  9661111 ttttaaattttaaattttgatgattacgttttttcattttcgtccctatgcaaatttgcgattttggttttggtccctcaa 9661031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 9661996 - 9662076
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaa 119  Q
    |||||||||| |||||||||| |||| || |||||| ||||||||||||| | |||||| |||||||||||  ||||||||    
T  9661996 ttttaaatttcaaattttgatgtttaagttttttcattttcgtccctatgcaaatttgcatttttggttttggtccctcaa 9662076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 10344322 - 10344271
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  10344322 caatgagggaagaagaagaataagatcttgattttcaatttgaaattttgat 10344271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 44820653 - 44820704
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || |||||||||||||||||||||| |||||    
T  44820653 caatgagggaagaagaagaataagatcttgattttaaatttgaaatgttgat 44820704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 350
Target Start/End: Complemental strand, 6842851 - 6842709
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||| | || | |||  |||||||| |||||||||||||||  ||||||||||| ||          |||||||| |||||| |||||    
T  6842851 ttttttaacagaagttaacgtcaaggattaaaaccaaaaaattaacaacttaccggatttgttttaaaataaaaaaagatacagggatgaaaaccaaaaa 6842752  T
Q  308 cacgcgaacttacaaggacgatttacatatttaaaccatttat 350  Q
    ||||| |||||||| | ||  |||||||||||||||| |||||    
T  6842751 cacgcaaacttacaggaaccttttacatatttaaaccttttat 6842709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 44465092 - 44465146
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  44465092 tacaaggacgagaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44465146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 6843890 - 6843970
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaa 119  Q
    ||||||||||  |||||||||  |||||| |||||| ||||||||||||| | ||||||| ||||||||||  ||||||||    
T  6843890 ttttaaattttgaattttgatgattacgttttttcattttcgtccctatgcaaatttgcgattttggttttggtccctcaa 6843970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 9662075 - 9662191
Alignment:
Q  159 aacgccatatcagcctttgccacgtaggcctccgtttgccggca-catcattttttaacagaagttgatgttagggaccaaaaccaataaattaacaact 257  Q
    |||||||  |||||||| |||||||  | ||||||||||| ||| ||   |||||||||||||||| | || |||||  |||||||| ||||||||||||    
T  9662075 aacgccaactcagccttcgccacgtgtgtctccgtttgccagcaacacgtttttttaacagaagttaacgtcagggattaaaaccaaaaaattaacaact 9662174  T
Q  258 tacaagatttgttttag 274  Q
    |||| | ||||||||||    
T  9662175 tacagggtttgttttag 9662191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 13947800 - 13947748
Alignment:
Q  292 ggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  13947800 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacc 13947748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 14088989 - 14088937
Alignment:
Q  292 ggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  14088989 ggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacc 14088937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 353
Target Start/End: Original strand, 44097274 - 44097421
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnt--tacagggacgaaaacaaaa 305  Q
    |||| ||||||||||| | ||||||||| |||||||| |  ||||||||||||| | ||||||||||||            ||||||||||||||| |||    
T  44097274 ttttgtaacagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaggaaaaaaaaaatacagggacgaaaaccaaa 44097373  T
Q  306 aacacgcgaacttacaaggacgatttacatatttaaaccatttattta 353  Q
    ||||||||||||||||  |||  |||| |||||||| || ||||||||    
T  44097374 aacacgcgaacttacagagaccttttatatatttaagccttttattta 44097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 37393940 - 37393889
Alignment:
Q  293 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||||||| ||||||||| | ||||||||| ||||||||||    
T  37393940 gacgaaaacaaaaaacacgtgaacttacatgaacgatttacctatttaaacc 37393889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 38730064 - 38730119
Alignment:
Q  287 tacagggacgaaaa-caaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||    
T  38730064 tacagggacgaaaaaccaaaaacacgcgaacttacaaggatgatttatatatttaa 38730119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 6842979 - 6842909
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||||| |||| || |||||| ||||||||||||| | |||||  |||||||||||    
T  6842979 ttttaaatttcaaattttgatgtttaagttttttcattttcgtccctatgcaaatttggatttttggtttt 6842909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 28563433 - 28563379
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  28563433 tacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 28563379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 34591782 - 34591728
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||||||||| || | |||||||| |||||||||||||||||||    
T  34591782 tacaaggacgaaaacaaaaaatacacaaacttacatggacgatttacatatttaa 34591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 35588184 - 35588130
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||| |||||||||||||| ||||||||| |||||||||    
T  35588184 tacatggacgaaaaccaaaagcacgcgaacttacatggacgatttccatatttaa 35588130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 40303346 - 40303296
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  40303346 gggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 40303296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 40303599 - 40303529
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || ||| | |||||||||||    
T  40303599 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcctttttggtttt 40303529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 44421344 - 44421398
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| ||||||||||||||||||||| || ||||| ||| |||||||||||||||    
T  44421344 tacaaggacgaaaacaaaaaacacgccaatttacagggatgatttacatatttaa 44421398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 45499358 - 45499308
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  45499358 gggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 45499308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 45499611 - 45499541
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || ||| | |||||||||||    
T  45499611 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcctttttggtttt 45499541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 44820931 - 44821000
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttatt 355  Q
    ||||||||||||||||||||||  |||||| ||||| ||||  ||||||||||||| || ||||| ||||    
T  44820931 ttacagggacgaaaacaaaaaatgcgcgaatttacagggaccttttacatatttaagccttttatatatt 44821000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 8803306 - 8803357
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||| |||| || |||||||||||| |||||||||| |||||||    
T  8803306 agggacgaaaaccaaaatcatgcgaacttacaaagacgatttacttatttaa 8803357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 9109057 - 9109006
Alignment:
Q  293 gacgaaaacaaaaaac-acgcgaacttacaaggacgatttacatatttaaac 343  Q
    |||||||||||||||  |||| ||||||||||||| ||||||||||||||||    
T  9109057 gacgaaaacaaaaaaatacgctaacttacaaggacaatttacatatttaaac 9109006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 22054392 - 22054337
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  22054392 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 22054337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 22060161 - 22060216
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  22060161 ttacagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaa 22060216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 22060485 - 22060536
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||| |||||||||| |||||||| ||||  |||||||||||||    
T  22060485 agggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 22060536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 40127298 - 40127243
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||| ||||||||||   |||||||||||| |||| ||||||||||||||    
T  40127298 ttacagggaccaaaacaaaaattgcgcgaacttacagggaccatttacatatttaa 40127243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 42929259 - 42929216
Alignment:
Q  16 gaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||| || ||||||||||||||| ||||||||||||    
T  42929259 gaagaagaagaataagatcttgattttaaatctgaaattttgat 42929216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 43516456 - 43516401
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||||||    
T  43516456 ttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaa 43516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 44463616 - 44463569
Alignment:
Q  294 acgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  44463616 acgaaaaccaaaaacacacgaacttacatagacgatttacatatttaa 44463569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 1841757 - 1841811
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| |||||||||| || || || |||||||||||||||||||    
T  1841757 tacagggacaaaaaccaaaaacacgccaaatttcagggacgatttacatatttaa 1841811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 10344045 - 10343991
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||||||||  | |||||||||| ||||  |||||||||||||    
T  10344045 tacagggacgaaaacaaaaaatgcacgaacttacatggaccttttacatatttaa 10343991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 10345148 - 10345206
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||||||||||  ||| || ||||| |||  |||||||||||||||||    
T  10345148 ttacagggacgaaaacaaaaaatgcgcaaaattacagggatcatttacatatttaaacc 10345206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 31558255 - 31558173
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||||||| |||||||||| |||| || ||||||||||| ||||| |  |  ||||| |||||||||||  ||||||||||    
T  31558255 ttttaaatttaaaattttgatgtttatgttttttcaatttcatccctctacaattttgcatttttggttttggtccctcaaat 31558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 1840204 - 1840160
Alignment:
Q  297 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| |||||||||| || ||||| |||||||||||||||||||    
T  1840204 aaaaccaaaaacacgccaaattacagggacgatttacatatttaa 1840160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 18161046 - 18161102
Alignment:
Q  288 acagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||| |||||||  |||||||||| || ||| | ||||||||||||||||||||||    
T  18161046 acaggtacgaaaagcaaaaacacgccaaattatatggacgatttacatatttaaacc 18161102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 20588477 - 20588521
Alignment:
Q  303 aaaaacacgcgaacttacaaggacgatttacatatttaaaccatt 347  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  20588477 aaaaacacgcgaaattacagggacgttttacatatttaagccatt 20588521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 22053400 - 22053348
Alignment:
Q  69 ttttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||| ||||||||||||| |  |||||||||||||||||  ||||||||||    
T  22053400 ttttcactttcgtccctatgcaactttgcgtttttggttttggtccctcaaat 22053348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 326
Target Start/End: Original strand, 28563956 - 28563996
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggac 326  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  28563956 ttacagggacgaaaaccaaaatctcgcgaacttacaaggac 28563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 31559458 - 31559510
Alignment:
Q  186 gcctccgtttgccggcacatcattttttaacagaagttgatgttagggaccaa 238  Q
    ||||||||| ||| ||||| | ||||||||| |||||||| ||||||||||||    
T  31559458 gcctccgttagccagcacaactttttttaacggaagttgacgttagggaccaa 31559510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 44095619 - 44095539
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaa 119  Q
    |||||||||| |||||||| | ||||| | |||||| |||| ||||| || |  |||||||||||||||||  ||||||||    
T  44095619 ttttaaatttcaaattttgttgtttacattttttcagtttcatccctctgtaattttgcgtttttggttttggtccctcaa 44095539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 28556558 - 28556461
Alignment:
Q  12 gagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  28556558 gagggatgaagaagaagaagatcttgtttttaaatttgaaattttgatatttacattttttcaatttcgtccctctgaacatttgcgtttttggtttt 28556461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 707056 - 706959
Alignment:
Q  12 gagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| |||||||||||| |||||| |||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  707056 gagggatgaagaagaagaagatcttgtttttaaatttaaaattttgatatttacattttttcaatttcgtccctctgaacatttgcgtttttggtttt 706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 33824075 - 33823978
Alignment:
Q  12 gagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||    
T  33824075 gagggatgaagaagaagaaggtcttgtttttaaatttgaaattttgatatttacgttttttcaatttcgtccctctgaacatttgtggttttggtttt 33823978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 707899 - 707995
Alignment:
Q  16 gaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtatttt---caatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||||| ||| | ||| |||||||||||||||||||| |||||||| ||||   ||||||| |||||||||||||||||||||||||||||    
T  707899 gaagaagaagaataatttattgtttttaaatttgaaattttgacatttacgtttttttttcaatttcatccctatgaacatttgcgtttttggtttt 707995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 12178619 - 12178486
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||| | ||||||||| |||||||| || |||||||||||||   |||||||||||||         ||||||||||||||| |||||    
T  12178619 ttttttaacagaagttaacgttagggactaaaaccaaaaagttaacaacttacagagtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 12178520  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||| | ||||  |||||||||||||    
T  12178519 cacgcgaacttagagggaccttttacatatttaa 12178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 46246498 - 46246631
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         ||||||||||||||| |||||    
T  46246498 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacagggacgaaaaccaaaaa 46246597  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| ||||  |||||||||||||    
T  46246598 cacgcgaacttacagggaccttttacatatttaa 46246631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 11671288 - 11671345
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  11671288 tacatggacgaaaacaaaaaacacgcgaacttacggggacgatttacatatttaaacc 11671345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 40028514 - 40028457
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||    
T  40028514 tacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaaacc 40028457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 41384207 - 41384152
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||    
T  41384207 ttacagggaccaaaacaaaaaatgcgcgaacttacaaggaccatttacatatttaa 41384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 45277969 - 45278028
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 346  Q
    ||||||||||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  45277969 tacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccat 45278028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 37133651 - 37133705
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  37133651 tacagtgacgaaaaccaaaaacacgcgaacttacggggacgatttacatatttaa 37133705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 40030031 - 40030085
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| ||||||||||||||||| || ||||| |||||||||||||||||||    
T  40030031 tacagggatgaaaacaaaaaacacgccaaattacagggacgatttacatatttaa 40030085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 46245428 - 46245358
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || ||| |||||||||||||    
T  46245428 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 46245358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 39787895 - 39787992
Alignment:
Q  12 gagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| |||||||| |||| |||||  ||||||||| ||||||  || ||||||| |||| |||||| ||||| || |||||| |||||||||||||    
T  39787895 gagggatgaagaagatgaatctcttgtctttaaatttcaaatttacatgtttacgtttttttaatttcatccctgtgcacatttacgtttttggtttt 39787992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 12180641 - 12180693
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattt 339  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||    
T  12180641 tacagggacgaaaaccaaaaacacgcgaacttacagggacaattaacatattt 12180693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 21016276 - 21016224
Alignment:
Q  303 aaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttatt 355  Q
    |||||||||| |||||| | |||||||| ||||||||||||||||||||||||    
T  21016276 aaaaacacgcaaacttatagggacgattcacatatttaaaccatttatttatt 21016224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 31734766 - 31734810
Alignment:
Q  297 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  31734766 aaaaccaaaaacacgcgaacttacaaggacgatttacatgtttaa 31734810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 3704452 - 3704401
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||| |||||||    
T  3704452 agggacgaaaaccaaaaacaagcgaacttacatggacgatttacctatttaa 3704401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 41385810 - 41385865
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||| |||||||||||  |||||||||||| |||| ||||||||||||||    
T  41385810 ttacagggaccaaaacaaaaaatgcgcgaacttacagggaccatttacatatttaa 41385865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 8230127 - 8230073
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||| | || ||||| |||||||||||||||||||    
T  8230127 tacagggacgaaaaccaaaaacacaccaaattacagggacgatttacatatttaa 8230073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 14774570 - 14774516
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  14774570 tacacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaa 14774516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 15225023 - 15224969
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  15225023 tacacggacgaaaacaaaaaacatgcgaacttacggggacaatttacatatttaa 15224969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 21715129 - 21715075
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||  |||||||||| || ||||| |||||||||||||||||||    
T  21715129 tacagggacgaaaatcaaaaacacgccaaattacagggacgatttacatatttaa 21715075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 21716621 - 21716675
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| | |||||||||||||||||    
T  21716621 tacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaa 21716675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 31392115 - 31392061
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||  || ||||| |||||||||||||||||||    
T  31392115 tacagggacgaaaaccaaaaacacgtcaaattacagggacgatttacatatttaa 31392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 31393661 - 31393715
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  31393661 tacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 31393715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 37131892 - 37131838
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||| |||||||| ||| ||||||||||||||  |||||||||||||||||||    
T  37131892 tacaggaacgaaaaccaaacacacgcgaacttacgtggacgatttacatatttaa 37131838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 46245175 - 46245125
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  46245175 gggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 46245125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 11669977 - 11669844
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||| |||| |||||| | ||||||||| |||| ||| |  ||||||||||||| | |  ||||||||||        ||||| |||||||||| |||||    
T  11669977 ttttgtaacggaagttaacgttagggactaaaatcaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacatggacgaaaaccaaaaa 11669878  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    || ||||||||||| ||||  |||||||||||||    
T  11669877 catgcgaacttacagggaccgtttacatatttaa 11669844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 11748966 - 11749002
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaa 322  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11748966 ttacagggacgaaaataaaaaacacgcgaacttacaa 11749002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 41591573 - 41591518
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||  |||||| ||||| ||||  |||||||||||||    
T  41591573 ttacagggacgaaaacaaaaaatgcgcgaaattacagggaccttttacatatttaa 41591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 5975440 - 5975517
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctc 117  Q
    |||||||||| ||||||||||  ||| || |||| ||||||||||||||| | |||||| ||||| |||||| ||||||    
T  5975440 ttttaaattttaaattttgatgattatgtttttt-aatttcgtccctatgtaaatttgcattttttgttttagtccctc 5975517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 8231636 - 8231690
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| ||||||| || || ||||| |||||||||||||||||||    
T  8231636 tacagggacaaaaaccaaaaacaagccaaattacagggacgatttacatatttaa 8231690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 13420288 - 13420342
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| |||||||||| |||||||| || | ||||||||||||||    
T  13420288 tacagggactaaaaccaaaaacacgcaaacttacaggggccatttacatatttaa 13420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 15135436 - 15135382
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| || |||||||||||||| |||||||||||   |||||||||||||||||    
T  15135436 tacagtgaagaaaacaaaaaacaagcgaacttacataaacgatttacatatttaa 15135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 15135684 - 15135614
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||| || || || ||| |||||||||||||    
T  15135684 ttttaaatttcaaattttgttatttatgtgtttttaatttcgtcactttgtaccttttcgtttttggtttt 15135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 15136946 - 15136995
Alignment:
Q  292 ggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||  ||||||||||||| ||||| |||||||||| ||||||||    
T  15136946 ggacgaaaatcaaaaacacgcgaatttacagggacgatttatatatttaa 15136995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 37350216 - 37350260
Alignment:
Q  297 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||    
T  37350216 aaaaccaaaaacacgcgaacttacggggaccatttacatatttaa 37350260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 17706478 - 17706381
Alignment:
Q  12 gagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| |||||||||||| |||||| |||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  17706478 gagggatgaagaagaagaagatcttgtttttaaatttaaaattttgatatttacattttttcaatttcgtccctctgaacatttgcgtttttggtttt 17706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 36900923 - 36901020
Alignment:
Q  12 gagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| || ||||||||  |||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  36900923 gagggatgatgaagaagatcatcttgtttttaaatttgaaattttgatatttacattttttcaatttcgtccctatgaacatttgcgtttttggtttt 36901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 36900209 - 36900115
Alignment:
Q  16 gaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacg-tattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  36900209 gaagaagaagaagaatatattgtttttaaatttgaaattttgacatttacgtttttttcaatttcatccctatgaacatttgcgtttttggtttt 36900115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 17707197 - 17707291
Alignment:
Q  16 gaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacg-tattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||||||||||||| ||||    
T  17707197 gaagaagaagaagaatatattgtttttaaatttgaaattttgacatttacgtttttttcaatttcatccctatgaacatttgcgtttttgatttt 17707291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 3158039 - 3158093
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  3158039 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 3158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 15279641 - 15279689
Alignment:
Q  293 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15279641 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaa 15279689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 15460010 - 15460058
Alignment:
Q  293 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15460010 gacgaaaaccaaaaacacgcgaacttacaaggacgatttacatatttaa 15460058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 358312 - 358261
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  358312 caatgagggaagaagaagaataagatcttgattttaaatatgaaattttgat 358261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 1650219 - 1650266
Alignment:
Q  294 acgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||    
T  1650219 acgaaaactaaaaacacgcgaacttacaaggacggtttacatatttaa 1650266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 45448243 - 45448326
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaatt 122  Q
    |||||||||| |||||||||| |||| || ||||||||||| ||||| || |  |||||||||||||||||  |||||||||||    
T  45448243 ttttaaattttaaattttgatgtttatgttttttcaatttcatccctttgcaattttgcgtttttggttttggtccctcaaatt 45448326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 22714051 - 22714105
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||| |||||||||| || ||||||||||||||||    
T  22714051 tacagggacgaaaaccaaaaacacacgaacttacaggggcgatttacatatttaa 22714105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 25265907 - 25265961
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||||||||||||| || |||||  ||||||||||||||||||    
T  25265907 tacagggacgaaaacaaaaaacacgccaaattacagagacgatttacatatttaa 25265961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 26719442 - 26719392
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatat 337  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  26719442 tacaaggacgaaaacaaaaaacacgcgaacttacatggatgatttacatat 26719392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 39884673 - 39884619
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  39884673 tacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 39884619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 39886078 - 39886132
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  39886078 tacagggactaaaaccaaaaacacgcgaacttacagggaccatttacatatttaa 39886132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 5461985 - 5461937
Alignment:
Q  293 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||    
T  5461985 gacgaaaacaaaaaacacgcgaacttacggtgacgatttacatatttaa 5461937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 21142810 - 21142762
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaatttt 56  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||    
T  21142810 caatgagggaagaagaagaataagatcttgattttaaatctgaaatttt 21142762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 25264397 - 25264343
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  25264397 tacaaggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 25264343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 33295447 - 33295501
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| |||||||||||||||| || |||||  ||||||||||||||||||    
T  33295447 tacagggacaaaaacaaaaaacacgccaaattacagagacgatttacatatttaa 33295501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 2552763 - 2552800
Alignment:
Q  296 gaaaacaaaaaacacgcgaacttacaaggacgatttac 333  Q
    |||||||||||||||||||||||||| |||||||||||    
T  2552763 gaaaacaaaaaacacgcgaacttacagggacgatttac 2552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 359318 - 359370
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||||||  |||||||||||| ||||  |||||||||||||    
T  359318 cagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 359370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 358035 - 357980
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  358035 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 357980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 17707449 - 17707504
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||| ||||| |||||||||| || ||||| |||| ||||||||||||||    
T  17707449 ttacagggactaaaaccaaaaacacgctaaattacatggaccatttacatatttaa 17707504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 21142537 - 21142482
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||||||||||  |||||||||||| ||||  |||||||||||||    
T  21142537 ttacaaggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaa 21142482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 31917282 - 31917215
Alignment:
Q  42 taaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    ||||||| |||||||| |||||| || |||| |||||||||||| || || ||| |||||||||||||    
T  31917282 taaatttcaaattttgttatttaggtgtttttaatttcgtccctttgtaccttttcgtttttggtttt 31917215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 27339104 - 27339222
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttac-----aagatttgttttagaacnnnnnnnnttacagggacgaaaaca 302  Q
    |||||||||||||||| | ||||| ||| |||||||| || ||||||||||||       |||||| ||||||||        ||||||| |||||||||    
T  27339104 ttttttaacagaagttaacgttagagactaaaaccaaaaagttaacaacttaccgagtttgatttgatttagaacaaaaaaagttacaggaacgaaaaca 27339203  T
Q  303 aaaaacacgcgaacttaca 321  Q
    ||||||| |||||||||||    
T  27339204 aaaaacatgcgaacttaca 27339222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 45448499 - 45448548
Alignment:
Q  292 ggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||| ||||||||||||||||| | ||||  |||||||||||||    
T  45448499 ggacgaaaaccaaaaacacgcgaacttagagggaccttttacatatttaa 45448548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 2552462 - 2552410
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||  |||||||||| ||||||||  ||||||||||||||||||    
T  2552462 cagggacgataatcaaaaacacgcaaacttacagagacgatttacatatttaa 2552410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Original strand, 26720252 - 26720304
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||| |||||||||||||||||   |||  ||||||||||||||    
T  26720252 cagggacgaaaaccaaaaacacgcgaacttatggggattatttacatatttaa 26720304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 36899956 - 36899888
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatttat 354  Q
    |||||||||| ||||| |||||||||| || ||||| ||||  ||||||||||||| || |||| ||||    
T  36899956 ttacagggactaaaaccaaaaacacgctaaattacagggaccttttacatatttaagccttttagttat 36899888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 37963325 - 37963277
Alignment:
Q  293 gacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| ||| || ||||||||||  |||||||||||||    
T  37963325 gacgaaaacaaaaaacgcgctaagttacaaggaccttttacatatttaa 37963277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 44690185 - 44690109
Alignment:
Q  179 cacgtaggcctccgtttgccggcacatcattttttaacagaagttgatgttagggaccaaaaccaataaattaacaa 255  Q
    |||||| ||||| ||| ||| ||||| ||||||||||| |||| ||| ||||||||||||  |||| || |||||||    
T  44690185 cacgtatgcctctgttagccagcacaacattttttaacggaagatgacgttagggaccaattccaaaaagttaacaa 44690109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 259
Target Start/End: Original strand, 7384634 - 7384874
Alignment:
Q  26 aagaatatcttgattttaaatttgaaattttgatatttacgtat-tttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaattac 124  Q
    ||||| |||||| |||||||||||||||||||||||||| || | |||||||||||||  |||||||||||| ||||||||||||  ||||||||| |||    
T  7384634 aagaagatcttgtttttaaatttgaaattttgatatttaagtttctttcaatttcgtctttatgaacatttgtgtttttggttttggtccctcaaactac 7384733  T
Q  125 tcatttatcattctg-catt-------tccacgtaagccacaaacgccatatcagcctttgccacgtaggcctccgtttgccggcacatcattttttaac 216  Q
    ||| |||| |||||| || |       |||||||||||||| || ||| | ||| |||||| ||||   |||||||||||||  ||||  || ||||       
T  7384734 tcacttattattctgccagtccacgactccacgtaagccactaatgccttctcaacctttgtcacgctagcctccgtttgccaacaca--atgttttttt 7384831  T
Q  217 agaagttgatgttagggaccaaaaccaataaattaacaactta 259  Q
    ||||||||| |||||||||||||||||| ||  ||||||||||    
T  7384832 agaagttgacgttagggaccaaaaccaaaaagctaacaactta 7384874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 24437210 - 24437077
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||| ||||| | ||||||||| |||||||| || ||||||| ||||| | |||||||||||||         ||||| |||||||||||||||    
T  24437210 ttttttaacaaaagttaacgttagggactaaaaccaaaaagttaacaatttacagggtttgttttagaacaaaaaaagatacagtgacgaaaacaaaaaa 24437111  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| ||||  |||||||||||||    
T  24437110 cacgcgaacttacagggaccttttacatatttaa 24437077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 50317052 - 50317109
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  50317052 tacagggacgaaaatcaaaaacacgcgaacttacatggacgatttacatatttaaacc 50317109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 7185858 - 7185912
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||||||||    
T  7185858 tacagggacgaaaacaaaaaacatgcaaacttacaaggacgatttgcatatttaa 7185912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 22684073 - 22684203
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||| ||||| | |||||||||||||         |||| |||||||||| |||||    
T  22684073 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaatttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaa 22684172  T
Q  308 cacgcgaacttacaaggacgatttacatatt 338  Q
    |||||||||||||||||||  ||||||||||    
T  22684173 cacgcgaacttacaaggaccttttacatatt 22684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 341
Target Start/End: Complemental strand, 50315454 - 50315321
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||| |||| |||||| | ||||||||| |||||||| |  ||||||||||||| | |  ||||||||||        |||||| ||||||||| |||||    
T  50315454 ttttgtaacggaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtgagttttagaacaaaaaaacttacagagacgaaaaccaaaaa 50315355  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| ||||  |||||||||||||    
T  50315354 cacgcgaacttacagggaccttttacatatttaa 50315321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 24438950 - 24439002
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattt 339  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  24438950 tacagggacgaaaaccaaaaacacgcgaatttacagggacgatttacatattt 24439002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 42301342 - 42301405
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtatttt 72  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||||    
T  42301342 caatgaaggaagaagaagaataagatcttgattttaaatttgaaattttgat-tttacgtttttt 42301405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 8322579 - 8322516
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattta 349  Q
    ||||||||||||||||||||||  |||||||||||| ||||  ||||||||||||| |||||||    
T  8322579 ttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagccattta 8322516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 9626526 - 9626471
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||    
T  9626526 ttacagggacgaaaacaaaaaatacgcgaacttacagggaccttttacatatttaa 9626471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 7184380 - 7184326
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||| ||||||||||||||||||||| || ||||||||||||||    
T  7184380 tacagagacgaaaaccaaaaacacgcgaacttacaagaacaatttacatatttaa 7184326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 7653743 - 7653689
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||    
T  7653743 tacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 7653689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 16673258 - 16673312
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  16673258 tacagggacgaaaaccaaaaacacgcaaaattacagggacgatttacatatttaa 16673312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 36145401 - 36145347
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||    
T  36145401 tacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaa 36145347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 13211114 - 13211171
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    ||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||    
T  13211114 tacagggacgaaaaccaaaaacacacaaacttacagggaagatttacatatttaaacc 13211171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 31810047 - 31809982
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccatttatt 351  Q
    ||||||||||||||||||||||  |||||||||||| ||||  ||||||||||||| || ||||||    
T  31810047 ttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttacatatttaagccttttatt 31809982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 33259374 - 33259435
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 348  Q
    ||||||||||||||| |||||||||| || ||||| |||| |||||||||||||| ||||||    
T  33259374 tacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagccattt 33259435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 33279533 - 33279594
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 348  Q
    ||||||||||||||| |||||||||| || ||||| |||| |||||||||||||| ||||||    
T  33279533 tacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaagccattt 33279594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 7001246 - 7001198
Alignment:
Q  296 gaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  7001246 gaaaacaaaaaacacatgaacttacaaggacgatttacctatttaaacc 7001198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 44268935 - 44268891
Alignment:
Q  297 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  44268935 aaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 44268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 9626805 - 9626754
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || ||||| ||||||||||| ||||||||||    
T  9626805 caatgagggaagaagaagaataagatcttaattttaaattttaaattttgat 9626754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 7655266 - 7655320
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| | |||||||||||||||||    
T  7655266 tacagggacgaaaaccaaaaacacgccaaattacaggaacgatttacatatttaa 7655320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 16592078 - 16592024
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||| ||||||||||||||    
T  16592078 tacagggacgaaaaccaaaaacacgccaaattacagggacaatttacatatttaa 16592024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 28920657 - 28920711
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| |||||||||||||||| || ||||| |||||| ||||||||||||    
T  28920657 tacagggacaaaaacaaaaaacacgccaaattacagggacgacttacatatttaa 28920711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 31321066 - 31321012
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||  |||||||    
T  31321066 tacagggacgaaaaccaaaaacacgcgaacttacagggatgatttaactatttaa 31321012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 46604744 - 46604674
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||||| |||| || ||||||||||| ||||| || || ||| |||||||||||||    
T  46604744 ttttaaattttaaattttgatttttatgttttttcaatttcatccctttgcacttttacgtttttggtttt 46604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 14095775 - 14095718
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacc 344  Q
    |||| ||||||||| |||||||||||||||||||| | ||  ||||||||||||||||    
T  14095775 tacatggacgaaaataaaaaacacgcgaacttacatgaaccttttacatatttaaacc 14095718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 50315627 - 50315542
Alignment:
Q  37 gattttaaatttgaaattttgatatttacgtatttt-caatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    |||||||||||| ||| |||||||||||| | |||| ||||||| ||||| || |  |||||||||||||||||  ||||||||||    
T  50315627 gattttaaattttaaaatttgatatttacatttttttcaatttcatccctctgcaattttgcgtttttggttttggtccctcaaat 50315542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 8323440 - 8323495
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  8323440 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 8323495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 31815771 - 31815826
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  31815771 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 31815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 28361077 - 28361007
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||| ||| |||||||||| ||||||| ||||||||||| |||||||| |  |||| ||||||| ||||    
T  28361077 ttttaatttttaaattttgatgtttacgttttttcaatttcatccctatgtaattttgtgtttttgatttt 28361007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 33257938 - 33257884
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  33257938 tacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 33257884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 33278110 - 33278056
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  33278110 tacaaggacaaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 33278056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 41668330 - 41668276
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||| |||||||||| || |||||  ||||||||||||||||||    
T  41668330 tacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 41668276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 46604496 - 46604442
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| |||||||||| |||||||||| |||||||| ||||  |||||||||||||    
T  46604496 tacaaggacgaaaaccaaaaacacgcaaacttacagggaccttttacatatttaa 46604442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 13209631 - 13209582
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacata 336  Q
    |||| ||||||||| |||||||||||||| ||| | ||||||||||||||    
T  13209631 tacaaggacgaaaataaaaaacacgcgaatttatagggacgatttacata 13209582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 27524573 - 27524497
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccct 116  Q
    ||||||| || ||| |||||| ||||||| |||| |||||| |||||||| | ||||| ||||||||||||| |||||    
T  27524573 ttttaaaattcaaaatttgatgtttacgt-ttttaaatttcatccctatgtaaatttgtgtttttggttttagtccct 27524497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 10708077 - 10708033
Alignment:
Q  297 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||||||||||||| ||||  |||||||||||||    
T  10708077 aaaaccaaaaacacgcgaacttacagggactttttacatatttaa 10708033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 26734481 - 26734429
Alignment:
Q  289 cagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  26734481 cagggacgaaaaccaaaaatgcgcgaacttacatggaccttttacatatttaa 26734429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 33981551 - 33981507
Alignment:
Q  297 aaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| |||||||| |||||||| | |||||||||||||||||||    
T  33981551 aaaaccaaaaacacacgaacttatagggacgatttacatatttaa 33981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Original strand, 44269079 - 44269135
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 346  Q
    ||||| |||||  ||||||||||||| |||||  |||||||||||||||||| ||||    
T  44269079 agggatgaaaatcaaaaacacgcgaatttacagagacgatttacatatttaagccat 44269135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 351
Target Start/End: Complemental strand, 1443553 - 1443410
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||| ||||| | ||||||||| |||||||| || ||||||||||||  | |||||||||||||         ||||||||||||||| |||||    
T  1443553 ttttttaacaaaagttaacgttagggactaaaaccaaaaagttaacaacttaccgggtttgttttagaacaaaaaaaaatacagggacgaaaaccaaaaa 1443454  T
Q  308 cacgcgaacttacaaggacgatttacatatttaaaccatttatt 351  Q
    |||| ||||||||| ||||  || |||||||||| || ||||||    
T  1443453 cacgtgaacttacagggacctttcacatatttaagccctttatt 1443410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 20773186 - 20773249
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtatttt 72  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||||    
T  20773186 caatgagggaagaagaagaataagatcttgattttaaatttgaaattttgat-tttacgtttttt 20773249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 1256771 - 1256717
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || |||||||||||||||||||||||||    
T  1256771 tacagggacgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 1256717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 842520 - 842414
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtt 107  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||||| ||||||| |||| | ||| |||||| ||   |||| |||||||| ||    
T  842520 caatgagggaagaagaagaataagatcttgattttaaatatgaaattttgat-tttacgt-ttttgattttagtccctgtggtaatttacgtttttgatt 842423  T
Q  108 ttaatccct 116  Q
    ||| |||||    
T  842422 ttagtccct 842414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 1258442 - 1258496
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  1258442 tacagggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaa 1258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 10707733 - 10707679
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  10707733 tacagggacgaaaataaaaaacacgcgaacttacagggacaatttatatatttaa 10707679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 8745486 - 8745430
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 346  Q
    |||||||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  8745486 agggacgaaaaccaaaaacacgccaaattacagggacgatttacatatttaagccat 8745430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 11065655 - 11065710
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||||||||  |||||||||||||    
T  11065655 ttacagggacgaaaaccaaaaatgcgcgaacttacaaggaccttttacatatttaa 11065710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 19402123 - 19402178
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||   ||||||||||||||||  |||||||||||||    
T  19402123 ttacagggacgaaaacaaaaaatgtgcgaacttacaaggaccttttacatatttaa 19402178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 28049290 - 28049207
Alignment:
Q  38 attttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    ||||||||||| ||||||| |||||||| | ||||||||||| ||||| || |  ||||| |||||||||||  ||||||||||    
T  28049290 attttaaatttcaaatttttatatttacattttttcaatttcatccctctgcaattttgcatttttggttttggtccctcaaat 28049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 8752802 - 8752856
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| |||||||||| || |||||  ||||||||||||||||||    
T  8752802 tacagggacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 8752856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 33469802 - 33469860
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaacca 345  Q
    |||||| ||||||| ||||||||| |||||||||| |||| ||| ||||||||||||||    
T  33469802 tacaggaacgaaaataaaaaacacacgaacttacagggacaattcacatatttaaacca 33469860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Complemental strand, 842244 - 842189
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||  |||||||||||| ||||  | |||||||||||    
T  842244 ttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttatacatatttaa 842189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 19084122 - 19084176
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| |||||||||| || ||||| ||||| |||||||||||||    
T  19084122 tacagggacaaaaaccaaaaacacgctaaattacagggacggtttacatatttaa 19084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 16308622 - 16308568
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  16308622 tacagggacgaaaaccaaaaacacgcgaacttacagggacgatttacatatttaa 16308568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 27756787 - 27756841
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  27756787 tacagggacgaaaacaaaaaacacgcgaacttagagggacgatttacatatttaa 27756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 28592134 - 28592081
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatattta 340  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  28592134 tacagggacgaaaataaaaaacacgcgaacttacaaggaccttttacatattta 28592081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 30332340 - 30332279
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccattt 348  Q
    ||||||||||||||||||||| |||| || ||||| ||||||||||||||||||| ||||||    
T  30332340 tacagggacgaaaacaaaaaatacgccaaattacagggacgatttacatatttaagccattt 30332279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 38626093 - 38626226
Alignment:
Q  208 ttttttaacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnttacagggacgaaaacaaaaaa 307  Q
    |||||||||||||||||| | ||||||| |||  ||| || ||| ||||||||| | |||||||||||||         |||| |||||||||| |||||    
T  38626093 ttttttaacagaagttgacggtagggacgaaattcaaaaagttatcaacttacagggtttgttttagaacaaaaaaagatacatggacgaaaaccaaaaa 38626192  T
Q  308 cacgcgaacttacaaggacgatttacatatttaa 341  Q
    || ||||||||||| ||||  |||||||||||||    
T  38626193 catgcgaacttacagggaccttttacatatttaa 38626226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 9672073 - 9672124
Alignment:
Q  8 caatgagggaagaagaagaagaatatcttgattttaaatttgaaattttgat 59  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  9672073 caatgagggaagaagaagaataagatcttgattttaaatctgaaattttgat 9672124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 1418938 - 1418992
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  1418938 tacagggacgaaaacaaaaaacacgtcaaattacagggacgatttacatatttaa 1418992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 38625022 - 38624952
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| ||||||||||||||| || ||| |||||||||||||    
T  38625022 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtccctatgtaccttttcgtttttggtttt 38624952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 17555005 - 17555060
Alignment:
Q  287 tacagggacgaaaa-caaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||| | ||||||||||||||||||| |||| ||||||||||||||    
T  17555005 tacagggacgaaaaaccaaaaacacgcgaacttacatggacaatttacatatttaa 17555060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 18201354 - 18201401
Alignment:
Q  294 acgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  18201354 acgaaaacaaaaaacacgcaaacttacagggacaatttacatatttaa 18201401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 39103420 - 39103467
Alignment:
Q  294 acgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| |||||||||| || |||||||||||||||||||||||||    
T  39103420 acgaaaaccaaaaacacgccaaattacaaggacgatttacatatttaa 39103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 11772453 - 11772523
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggtttt 109  Q
    |||||||||| |||||||| |||||| || |||| |||||||| |||||| || ||| |||||||||||||    
T  11772453 ttttaaatttcaaattttgttatttaggtgtttttaatttcgtgcctatgtaccttttcgtttttggtttt 11772523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 25916280 - 25916334
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||| ||||| |||||||||| || ||||| |||||||||||||||||||    
T  25916280 tacagggacaaaaaccaaaaacacgccaaattacatggacgatttacatatttaa 25916334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 38624769 - 38624719
Alignment:
Q  291 gggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||| ||||||||||||||||||| ||||  |||||||||||||    
T  38624769 gggacgaaaaccaaaaacacgcgaacttacagggaccttttacatatttaa 38624719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 28592421 - 28592454
Alignment:
Q  288 acagggacgaaaacaaaaaacacgcgaacttaca 321  Q
    ||||||||||||||||||||||||||||||||||    
T  28592421 acagggacgaaaacaaaaaacacgcgaacttaca 28592454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 8874276 - 8874335
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 346  Q
    ||||||||||||||| ||||||| |  || ||||| ||||||||||||||||||| ||||    
T  8874276 tacagggacgaaaaccaaaaacaggtcaaattacagggacgatttacatatttaagccat 8874335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 9672352 - 9672407
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||||||||||  |||||||||||| ||||  |||| ||||||||    
T  9672352 ttacagggacgaaaacaaaaaatgcgcgaacttacagggaccttttatatatttaa 9672407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 16310108 - 16310155
Alignment:
Q  294 acgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||| |||||||  |||||||||| |||||||||||||||||||    
T  16310108 acgaaaaccaaaaacatacgaacttacatggacgatttacatatttaa 16310155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 8872577 - 8872523
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||| |||||||| |||||||||| || ||||| |||||| ||||||||||||    
T  8872577 tacaggaacgaaaaccaaaaacacgccaaattacagggacgaattacatatttaa 8872523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 28803713 - 28803659
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||| ||||||||| ||||||||  |||||||||||| ||||||||| |||||||    
T  28803713 tacatggacgaaaataaaaaacatccgaacttacaagaacgatttacctatttaa 28803659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 36619601 - 36619547
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||||||||||||  |||||||||| || ||| | |||||||||||||||||||    
T  36619601 tacagggacgaaaatcaaaaacacgccaaattatagggacgatttacatatttaa 36619547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 28592378 - 28592301
Alignment:
Q  45 atttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgttttt-ggttttaatccctcaaat 121  Q
    |||| |||||||||| ||||||| |||||| |||| |||||||| |  ||||||||||| ||||||  ||||||||||    
T  28592378 atttcaaattttgatgtttacgttttttcactttcttccctatgcaactttgcgtttttgggttttggtccctcaaat 28592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 33083904 - 33083984
Alignment:
Q  39 ttttaaatttgaaattttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaa 119  Q
    |||||||||| ||||||||||  |||||| |||||| |||||||||||   | ||||||| ||||| ||||  ||||||||    
T  33083904 ttttaaattttaaattttgatgattacgttttttcattttcgtccctaaacaaatttgcgattttgattttggtccctcaa 33083984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 12117 - 12051
Alignment:
Q  8 caatgagggaagaagaagaagaata---tcttgattttaaatttgaaattttgatatttacgtatttt 72  Q
    |||||||||||||||||||||||||   |||||||||||||| |||||||||||| ||||||| ||||    
T  12117 caatgagggaagaagaagaagaataagatcttgattttaaatctgaaattttgat-tttacgtttttt 12051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 341
Target Start/End: Complemental strand, 2221 - 2054
Alignment:
Q  175 ttgccacgtaggcctccgtttgccggcacatcattttt-taacagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgtttta 273  Q
    |||||||||  | ||||||||||| || || | ||||| ||||||||||| | ||||||||| |||||||| |  || | |||||||  |  ||||||||    
T  2221 ttgccacgtgtgactccgtttgccagctcaacgtttttgtaacagaagttaacgttagggactaaaaccaaaacgtttataacttacgggggttgtttta 2122  T
Q  274 gaacnnnnnnnnttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||         |||||||||| |||| ||||||||||||||||||||||||  ||| |||||||||    
T  2121 gaacaaaaaaagatacagggacggaaaccaaaaacacgcgaacttacaaggacatttttcatatttaa 2054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 2343 - 2275
Alignment:
Q  53 ttttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    ||||||| ||||||| |||||| ||  ||||||||| |  |||||||||||||||||  ||||||||||    
T  2343 ttttgatgtttacgttttttcacttcagtccctatgcaactttgcgtttttggttttggtccctcaaat 2275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 10126 - 10167
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacga 328  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  10126 tacagggacgaaaacaaaaaatacgcgaatttacaaggacga 10167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 545 - 589
Alignment:
Q  302 aaaaaacacgcgaacttacaaggacgatttacatatttaaaccat 346  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  545 aaaaaacacgcgatcttacatggacgatttacatatttaacccat 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 341
Target Start/End: Complemental strand, 12261 - 12134
Alignment:
Q  215 acagaagttgatgttagggaccaaaaccaataaattaacaacttacaagatttgttttagaacnnnnnnnnt-tacagggacgaaaacaaaaaacacgcg 313  Q
    ||||||||| | ||||||||| |||||||| |  ||||||||||||| | ||||||||||||           ||||||||||||||| |||||||||||    
T  12261 acagaagttaacgttagggactaaaaccaaaaggttaacaacttacagggtttgttttagaaagaaaaaaagatacagggacgaaaaccaaaaacacgcg 12162  T
Q  314 aacttacaaggacgatttacatatttaa 341  Q
    |||||||  | ||  |||||||||||||    
T  12161 aacttaccggaaccttttacatatttaa 12134  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 4258 - 4313
Alignment:
Q  286 ttacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    |||||||||||||||| |||||  |||||||||||| ||||  |||||||||||||    
T  4258 ttacagggacgaaaaccaaaaatgcgcgaacttacagggaccttttacatatttaa 4313  T

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Target: scaffold1118 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 336
Target Start/End: Complemental strand, 2466 - 2420
Alignment:
Q  290 agggacgaaaacaaaaaacacgcgaacttacaaggacgatttacata 336  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||||    
T  2466 agggacgaaaaccaaaaacacgcgaacttacagggaccttttacata 2420  T

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Target: scaffold1118; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 2704 - 2636
Alignment:
Q  53 ttttgatatttacgtattttcaatttcgtccctatgaacatttgcgtttttggttttaatccctcaaat 121  Q
    ||||||| ||||||| |||||| |||||||||| |  |  |||||||||||||||||  ||||||||||    
T  2704 ttttgatgtttacgttttttcactttcgtccctcttcaactttgcgtttttggttttcgtccctcaaat 2636  T

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Target: scaffold0633 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 6896 - 6950
Alignment:
Q  287 tacagggacgaaaacaaaaaacacgcgaacttacaaggacgatttacatatttaa 341  Q
    ||||| ||||||||| |||||||||| || |||||  ||||||||||||||||||    
T  6896 tacagagacgaaaaccaaaaacacgccaaattacagagacgatttacatatttaa 6950  T

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Target: scaffold0524 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 7739 - 7697
Alignment:
Q  303 aaaaacacgcgaacttacaaggacgatttacatatttaaacca 345  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||    
T  7739 aaaaacacgcgaaattacagggacgttttacatatttaaacca 7697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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