View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9842_high_10 (Length: 333)

Name: NF9842_high_10
Description: NF9842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9842_high_10
NF9842_high_10
[»] chr5 (33 HSPs)
chr5 (17-320)||(7913105-7913408)
chr5 (169-211)||(6167292-6167334)
chr5 (119-209)||(39919051-39919138)
chr5 (119-167)||(22228959-22229007)
chr5 (169-201)||(38097353-38097385)
chr5 (119-209)||(8968774-8968869)
chr5 (119-209)||(9835058-9835153)
chr5 (119-209)||(12463781-12463876)
chr5 (163-206)||(16280320-16280363)
chr5 (174-209)||(18597493-18597528)
chr5 (119-209)||(25400317-25400412)
chr5 (119-201)||(41179761-41179848)
chr5 (169-207)||(3741034-3741072)
chr5 (169-207)||(3821373-3821411)
chr5 (169-207)||(8241130-8241168)
chr5 (119-209)||(35515537-35515632)
chr5 (121-209)||(11188632-11188725)
chr5 (169-209)||(2301521-2301561)
chr5 (169-209)||(2848293-2848333)
chr5 (169-209)||(4745826-4745866)
chr5 (169-201)||(6734697-6734729)
chr5 (169-209)||(10404207-10404247)
chr5 (171-211)||(10804177-10804217)
chr5 (169-209)||(11795573-11795613)
chr5 (119-155)||(17175060-17175096)
chr5 (169-209)||(21749328-21749368)
chr5 (163-207)||(23937885-23937929)
chr5 (169-209)||(25648034-25648074)
chr5 (169-209)||(27765337-27765377)
chr5 (169-209)||(29154922-29154962)
chr5 (169-209)||(29691437-29691477)
chr5 (172-208)||(33383656-33383692)
chr5 (169-209)||(36888345-36888385)
[»] chr8 (51 HSPs)
chr8 (222-319)||(31240360-31240457)
chr8 (119-209)||(5328517-5328612)
chr8 (117-209)||(10761842-10761939)
chr8 (119-209)||(31450907-31451002)
chr8 (119-209)||(33838349-33838444)
chr8 (169-212)||(43875197-43875240)
chr8 (17-54)||(31240019-31240056)
chr8 (119-211)||(37290947-37291044)
chr8 (169-209)||(21548447-21548487)
chr8 (119-209)||(2787031-2787126)
chr8 (169-208)||(3912115-3912154)
chr8 (119-209)||(10736824-10736919)
chr8 (119-209)||(13406625-13406720)
chr8 (119-209)||(17698547-17698642)
chr8 (119-209)||(34894394-34894489)
chr8 (119-209)||(37717388-37717483)
chr8 (171-209)||(9735785-9735823)
chr8 (175-209)||(13748969-13749003)
chr8 (169-207)||(31024374-31024412)
chr8 (169-207)||(36035131-36035169)
chr8 (169-207)||(37708771-37708809)
chr8 (169-207)||(44053392-44053430)
chr8 (176-209)||(2908042-2908075)
chr8 (119-209)||(3189909-3189994)
chr8 (119-211)||(23858222-23858319)
chr8 (169-206)||(33810720-33810757)
chr8 (119-211)||(37669711-37669808)
chr8 (169-209)||(257619-257659)
chr8 (169-209)||(658261-658301)
chr8 (169-209)||(843997-844037)
chr8 (119-155)||(5570919-5570955)
chr8 (169-209)||(7763889-7763929)
chr8 (169-209)||(7816483-7816523)
chr8 (169-209)||(9187173-9187213)
chr8 (169-209)||(10568165-10568205)
chr8 (169-209)||(11127982-11128022)
chr8 (169-209)||(13059127-13059167)
chr8 (169-209)||(17027831-17027871)
chr8 (169-209)||(17072513-17072553)
chr8 (169-209)||(17558267-17558307)
chr8 (169-209)||(17575718-17575758)
chr8 (119-167)||(26022272-26022320)
chr8 (169-209)||(28909545-28909585)
chr8 (169-209)||(29514706-29514746)
chr8 (169-201)||(32779205-32779237)
chr8 (169-209)||(34266092-34266132)
chr8 (169-201)||(34873166-34873198)
chr8 (169-209)||(36572988-36573028)
chr8 (169-209)||(38219518-38219558)
chr8 (169-209)||(39587627-39587667)
chr8 (169-209)||(43186933-43186973)
[»] chr1 (35 HSPs)
chr1 (117-209)||(12650334-12650431)
chr1 (119-201)||(15775764-15775851)
chr1 (163-206)||(29527187-29527230)
chr1 (169-206)||(27579427-27579464)
chr1 (119-209)||(27818594-27818688)
chr1 (119-212)||(12662713-12662810)
chr1 (169-201)||(35049570-35049602)
chr1 (119-209)||(46021837-46021924)
chr1 (119-209)||(1570142-1570237)
chr1 (119-209)||(4482548-4482643)
chr1 (163-210)||(5430988-5431035)
chr1 (119-209)||(6438014-6438109)
chr1 (119-209)||(13773193-13773288)
chr1 (119-209)||(15819551-15819646)
chr1 (119-209)||(16343053-16343148)
chr1 (119-209)||(21265681-21265776)
chr1 (119-209)||(48638557-48638652)
chr1 (163-201)||(18911925-18911963)
chr1 (169-211)||(32970749-32970791)
chr1 (168-209)||(11356833-11356874)
chr1 (169-201)||(1604182-1604214)
chr1 (169-209)||(2277834-2277874)
chr1 (169-201)||(7078258-7078290)
chr1 (169-209)||(8984456-8984496)
chr1 (169-209)||(12048074-12048114)
chr1 (169-209)||(12502204-12502244)
chr1 (119-167)||(17580342-17580390)
chr1 (169-209)||(18101528-18101568)
chr1 (169-201)||(18512533-18512565)
chr1 (169-209)||(18534081-18534121)
chr1 (169-209)||(28564295-28564335)
chr1 (169-209)||(32594331-32594371)
chr1 (169-209)||(40519493-40519533)
chr1 (169-209)||(47642932-47642972)
chr1 (169-209)||(50103941-50103981)
[»] scaffold0009 (1 HSPs)
scaffold0009 (119-209)||(266655-266742)
[»] chr3 (39 HSPs)
chr3 (119-209)||(47098757-47098852)
chr3 (119-211)||(7920345-7920442)
chr3 (169-209)||(25883938-25883978)
chr3 (119-209)||(4139025-4139120)
chr3 (119-209)||(7269980-7270075)
chr3 (119-209)||(10176853-10176948)
chr3 (119-209)||(10482803-10482898)
chr3 (119-209)||(18194363-18194458)
chr3 (119-201)||(32256512-32256599)
chr3 (119-209)||(33225298-33225393)
chr3 (119-209)||(37488410-37488505)
chr3 (119-209)||(37800561-37800656)
chr3 (119-209)||(39719960-39720055)
chr3 (119-209)||(40548328-40548423)
chr3 (119-209)||(40933781-40933876)
chr3 (119-209)||(41936357-41936452)
chr3 (119-209)||(50496764-50496859)
chr3 (119-209)||(53432687-53432782)
chr3 (169-207)||(27329884-27329922)
chr3 (169-207)||(41710663-41710701)
chr3 (169-207)||(46767423-46767461)
chr3 (169-207)||(51879175-51879213)
chr3 (119-199)||(4200545-4200630)
chr3 (169-201)||(1538626-1538658)
chr3 (169-209)||(2523006-2523046)
chr3 (169-209)||(6919913-6919953)
chr3 (169-209)||(8964726-8964766)
chr3 (169-209)||(9114091-9114131)
chr3 (169-209)||(11206070-11206110)
chr3 (169-209)||(16906769-16906809)
chr3 (169-209)||(30555177-30555217)
chr3 (169-209)||(31327451-31327491)
chr3 (169-209)||(33706677-33706717)
chr3 (169-201)||(39709118-39709150)
chr3 (169-209)||(45701424-45701464)
chr3 (119-209)||(46880022-46880109)
chr3 (169-209)||(48251652-48251692)
chr3 (169-209)||(50675692-50675732)
chr3 (169-209)||(53906459-53906499)
[»] chr2 (28 HSPs)
chr2 (119-211)||(16384990-16385087)
chr2 (169-209)||(18862332-18862372)
chr2 (119-209)||(38387688-38387775)
chr2 (119-209)||(40535399-40535494)
chr2 (112-209)||(20296436-20296538)
chr2 (119-211)||(4562700-4562797)
chr2 (163-207)||(5947940-5947984)
chr2 (169-209)||(32854612-32854652)
chr2 (119-201)||(37063545-37063624)
chr2 (163-195)||(42633479-42633511)
chr2 (119-209)||(2643722-2643817)
chr2 (119-201)||(13975151-13975238)
chr2 (119-209)||(33228883-33228978)
chr2 (119-209)||(39408640-39408735)
chr2 (119-209)||(41509541-41509636)
chr2 (169-207)||(15939369-15939407)
chr2 (169-198)||(44898443-44898472)
chr2 (169-209)||(1260264-1260304)
chr2 (169-209)||(1309076-1309116)
chr2 (169-209)||(1844897-1844937)
chr2 (169-209)||(6331641-6331681)
chr2 (119-167)||(15233438-15233486)
chr2 (169-209)||(17499029-17499069)
chr2 (169-209)||(18694865-18694905)
chr2 (171-211)||(24439674-24439714)
chr2 (169-201)||(34125825-34125857)
chr2 (169-209)||(38400394-38400434)
chr2 (112-155)||(41195979-41196023)
[»] chr7 (26 HSPs)
chr7 (119-209)||(21388548-21388635)
chr7 (119-209)||(12640539-12640634)
chr7 (119-201)||(30388465-30388552)
chr7 (119-206)||(32047114-32047206)
chr7 (163-207)||(13702099-13702143)
chr7 (163-207)||(46758316-46758360)
chr7 (119-209)||(29617430-29617525)
chr7 (119-209)||(31026244-31026339)
chr7 (119-209)||(32676892-32676987)
chr7 (169-211)||(21402776-21402818)
chr7 (117-209)||(32619373-32619470)
chr7 (169-209)||(3062854-3062894)
chr7 (169-209)||(4960864-4960904)
chr7 (169-209)||(10244839-10244879)
chr7 (119-155)||(12264079-12264115)
chr7 (169-209)||(18503430-18503470)
chr7 (169-209)||(21762842-21762882)
chr7 (169-209)||(24508906-24508946)
chr7 (169-209)||(24781110-24781150)
chr7 (169-209)||(27510207-27510247)
chr7 (169-209)||(28547731-28547771)
chr7 (169-209)||(35645679-35645719)
chr7 (169-209)||(35950208-35950248)
chr7 (169-209)||(43119382-43119422)
chr7 (163-207)||(46645783-46645827)
chr7 (119-201)||(48288367-48288446)
[»] chr4 (34 HSPs)
chr4 (119-209)||(2222564-2222659)
chr4 (169-207)||(47929325-47929363)
chr4 (120-209)||(10402467-10402561)
chr4 (121-201)||(45741502-45741587)
chr4 (119-206)||(27103054-27103146)
chr4 (119-209)||(44602510-44602597)
chr4 (88-155)||(7272511-7272578)
chr4 (119-209)||(12581978-12582073)
chr4 (119-209)||(43147334-43147429)
chr4 (119-209)||(43596920-43597015)
chr4 (119-209)||(46774980-46775075)
chr4 (119-209)||(49901507-49901602)
chr4 (163-209)||(3904417-3904463)
chr4 (169-211)||(10406977-10407019)
chr4 (169-207)||(23142705-23142743)
chr4 (169-207)||(23176674-23176712)
chr4 (169-207)||(30305879-30305917)
chr4 (163-201)||(31187498-31187536)
chr4 (169-207)||(36099135-36099173)
chr4 (171-208)||(13161828-13161865)
chr4 (119-209)||(35948133-35948227)
chr4 (169-201)||(624560-624592)
chr4 (169-209)||(2688176-2688215)
chr4 (169-209)||(3036005-3036045)
chr4 (169-209)||(5304960-5305000)
chr4 (169-209)||(10141063-10141103)
chr4 (169-209)||(33933689-33933729)
chr4 (169-209)||(40051702-40051742)
chr4 (169-209)||(40994053-40994093)
chr4 (169-209)||(48950864-48950904)
chr4 (169-209)||(49757234-49757274)
chr4 (169-209)||(52731389-52731429)
chr4 (169-209)||(53634201-53634241)
chr4 (169-209)||(55536459-55536499)
[»] chr6 (27 HSPs)
chr6 (119-211)||(361188-361285)
chr6 (119-206)||(2500467-2500559)
chr6 (119-209)||(7207869-7207964)
chr6 (119-209)||(8857115-8857203)
chr6 (119-209)||(10517224-10517319)
chr6 (119-209)||(17441789-17441884)
chr6 (119-209)||(19953778-19953873)
chr6 (119-209)||(32611504-32611599)
chr6 (125-207)||(32621534-32621621)
chr6 (169-199)||(6329821-6329851)
chr6 (119-209)||(7414354-7414444)
chr6 (169-209)||(2816970-2817010)
chr6 (169-209)||(3794123-3794163)
chr6 (119-209)||(4408383-4408470)
chr6 (169-209)||(5052024-5052064)
chr6 (169-209)||(7328597-7328637)
chr6 (169-209)||(7581124-7581164)
chr6 (169-209)||(9704496-9704536)
chr6 (169-209)||(13116574-13116614)
chr6 (169-201)||(18904345-18904377)
chr6 (169-209)||(27218964-27219004)
chr6 (169-209)||(28148683-28148723)
chr6 (119-155)||(28222888-28222924)
chr6 (169-209)||(28842734-28842774)
chr6 (169-201)||(32141994-32142026)
chr6 (169-209)||(33573897-33573937)
chr6 (169-209)||(33646915-33646955)
[»] scaffold0608 (1 HSPs)
scaffold0608 (119-209)||(8991-9086)
[»] scaffold0088 (1 HSPs)
scaffold0088 (119-209)||(10776-10871)
[»] scaffold1787 (1 HSPs)
scaffold1787 (89-155)||(395-461)
[»] scaffold1185 (1 HSPs)
scaffold1185 (169-209)||(2343-2383)
[»] scaffold0690 (1 HSPs)
scaffold0690 (169-209)||(3746-3786)
[»] scaffold0460 (1 HSPs)
scaffold0460 (169-209)||(12539-12579)
[»] scaffold0394 (1 HSPs)
scaffold0394 (169-209)||(1342-1382)
[»] scaffold0254 (1 HSPs)
scaffold0254 (169-209)||(1397-1437)
[»] scaffold0128 (1 HSPs)
scaffold0128 (169-209)||(17700-17740)
[»] scaffold0038 (1 HSPs)
scaffold0038 (119-155)||(23386-23422)
[»] scaffold0028 (1 HSPs)
scaffold0028 (169-209)||(112188-112228)
[»] scaffold0014 (1 HSPs)
scaffold0014 (169-209)||(12211-12251)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 17 - 320
Target Start/End: Complemental strand, 7913408 - 7913105
Alignment:
Q  17 agttaggacttgtggatgaagaactaattatttagtacaccactaacattgcatttaagatttaaacaatgaatatcctcgtcaacttagttcgattgac 116  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |    
T  7913408 agttaggacttgtggatgaagagctaattatttagtagaccactaacattgcatttaagatttaaacaatgaatatcctcgtgaacttagttcagttggc 7913309  T
Q  117 aaggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctacttaaattca 216  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  7913308 aaggatattgcatattatatgcagaggccggagctcgaagtccagacactcatccacatttaaaatgtgcgagctctatccactacgctacttacattca 7913209  T
Q  217 accggtgacaagcaacttcgggaactattacaggcatgtcaatagcgctccaaccgaattgatccactgtgctcgaaccagttctgaaagttctttcccg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7913208 accggtgacaagcaacttcgggaactattacaggcatgtcaatagcgctccaaccgaattgatccactgtgctcgaaccagttctgaaagttctttcccg 7913109  T
Q  317 atct 320  Q
    ||||    
T  7913108 atct 7913105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 6167292 - 6167334
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  6167292 tccacatttaaaatgtgtgagctctagccactaggctacttaa 6167334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 39919138 - 39919051
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||   |||| ||||| |||||||||||||||||||| |||||||    
T  39919138 ggatattgcatattatatgcaggagccggggttcgaaccccggacactc---cacaattaaattgtgtgagctctagccactaggctactt 39919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 22229007 - 22228959
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc 167  Q
    |||||||||||||||||||||| || ||||||||||| ||| |||||||    
T  22229007 ggatattgcatgttatatgcaggggtcggagttcgaactccggacactc 22228959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 38097353 - 38097385
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||||||||||||    
T  38097353 tccacatttaaaatgtgtgagctctagccacta 38097385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 8968774 - 8968869
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  8968774 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 8968869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 9835058 - 9835153
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  9835058 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 9835153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 12463781 - 12463876
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  12463781 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 12463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 16280320 - 16280363
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||    
T  16280320 cactcctccacatttaaattgtgtgagctctagccactaggcta 16280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 18597493 - 18597528
Alignment:
Q  174 atttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||||||||| |||||||    
T  18597493 atttaaaatgtgtgagctctagccactaggctactt 18597528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 25400412 - 25400317
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  25400412 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 25400317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 41179848 - 41179761
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||||||||| ||||||||||||||||||||    
T  41179848 ggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacatttaaattgtgtgagctctagccacta 41179761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 3741034 - 3741072
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  3741034 tccacatttaaaatgtgtgagctccagccactaggctac 3741072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 3821411 - 3821373
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  3821411 tccacatttaaaatgtgtgagctccagccactaggctac 3821373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 8241130 - 8241168
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  8241130 tccacatttaaaatgtgtgagctctaaccactaggctac 8241168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 35515537 - 35515632
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacact-ca----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||| ||    |||||| ||||| |||||||||||||||||||| |||||||    
T  35515537 ggatattgcatattatatgcaggagccggggttcgaaccccggacacttcacttctccacaattaaattgtgtgagctctagccactaggctactt 35515632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 11188725 - 11188632
Alignment:
Q  121 atattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||| |||||||||| ||| || |||| ||  |||||||||||     |||||| || || |||||||||||||||||||| |||||||    
T  11188725 atattgcatattatatgcaggggctggggttcaaaccccagacactcaacttctccacaatttaattgtgtgagctctagccactaggctactt 11188632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 2301561 - 2301521
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2301561 tccacaattaaattgtgtgagctctagccactaggctactt 2301521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 2848293 - 2848333
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2848293 tccacaattaaattgtgtgagctctagccactaggctactt 2848333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 4745866 - 4745826
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  4745866 tccacaattaaattgtgtgagctctagccactaggctactt 4745826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 6734729 - 6734697
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||| ||||||||    
T  6734729 tccacatttaaaatgtgtgagctccagccacta 6734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 10404207 - 10404247
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  10404207 tccacaattaaattgtgtgagctctagccactaggctactt 10404247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 10804217 - 10804177
Alignment:
Q  171 cacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  10804217 cacagttaaattgtgtgagctctagccactaggctacttaa 10804177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 11795573 - 11795613
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  11795573 tccacaattaaattgtgtgagctctagccactaggctactt 11795613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 17175096 - 17175060
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    |||||||||||||||||||||| |||||| |||||||    
T  17175096 ggatattgcatgttatatgcaggggccggggttcgaa 17175060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 21749368 - 21749328
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  21749368 tccacaattaaattgtgtgagctctagccactaggctactt 21749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 23937929 - 23937885
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||| |||||||||||||||||||||||  |||||||| |||||    
T  23937929 cactcctccacatttaaaatgtgtgagctacagccactaggctac 23937885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 25648074 - 25648034
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  25648074 tccacaattaaattgtgtgagctctagccactaggctactt 25648034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 27765337 - 27765377
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  27765337 tccacaattaaattgtgtgagctctagccactaggctactt 27765377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 29154922 - 29154962
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||| |||||||||||||||||||    
T  29154922 tccacaattaaattgtgtgagttctagccactacgctactt 29154962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 29691437 - 29691477
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  29691437 tccacaattaaattgtgtgagctctagccactaggctactt 29691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 33383656 - 33383692
Alignment:
Q  172 acatttaaaatgtgtgagctctagccactacgctact 208  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  33383656 acatttaaaatgtgtgagctctaaccactaagctact 33383692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 36888385 - 36888345
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  36888385 tccacaattaaattgtgtgagctctagccactaagctactt 36888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 31240360 - 31240457
Alignment:
Q  222 tgacaagcaacttcgggaactattacaggcatgtcaatagcgctccaaccgaattgatccactgtgctcgaaccagttctgaaagttctttcccgatc 319  Q
    ||||||||||||| |||| |||||||| |||| |||| |||||||||||||||| ||||  ||||||| ||||||||| || ||||||||||||||||    
T  31240360 tgacaagcaacttagggatctattacatgcatatcaacagcgctccaaccgaatagatcagctgtgcttgaaccagttttggaagttctttcccgatc 31240457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 5328612 - 5328517
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacac-tca----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |||    |||||| |||||||||||||||||||||||||| |||||||    
T  5328612 ggatattgcatattatatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaatgtgtgagctctagccactaggctactt 5328517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 10761842 - 10761939
Alignment:
Q  117 aaggatattgcatgttatatgcagaggccggagttcgaagtccagacac-tca----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||| ||||||  |||||||||||||||||  | |||||| |||    |||||| ||||| |||||||||||||||||||| |||||||    
T  10761842 aaggatattgcatattatatttagaggccggagttcgaaccctagacacctcacttctccacaattaaattgtgtgagctctagccactaggctactt 10761939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 31451002 - 31450907
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| ||||||| ||| |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  31451002 ggatattgcatattatatgcaggagccggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 31450907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 33838349 - 33838444
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||  ||||||| ||| ||||| ||||||| |||||||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  33838349 ggatattgcaaattatatgtagaagccggggttcgaactccagacactccatttctccacaattaaattgtgtgagctctagccactaggctactt 33838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 43875240 - 43875197
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctacttaaa 212  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  43875240 tccacatttaaaatgtgcgagctctagccactatgctacttaaa 43875197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 31240019 - 31240056
Alignment:
Q  17 agttaggacttgtggatgaagaactaattatttagtac 54  Q
    |||||| |||||||||||||||||||||||||||||||    
T  31240019 agttagaacttgtggatgaagaactaattatttagtac 31240056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 37290947 - 37291044
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||||    
T  37290947 ggatattgcatattatatgcaggggccggcgttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctacttaa 37291044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 21548487 - 21548447
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  21548487 tccacaattaaaatgtgtgagctctagccactaggctactt 21548447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 2787126 - 2787031
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  2787126 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 2787031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 3912154 - 3912115
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctact 208  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  3912154 tccacatttataatgtgtgagctctagccactaggctact 3912115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 10736919 - 10736824
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  10736919 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 10736824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 13406625 - 13406720
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  |||||||||||||  |  |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  13406625 ggatattgcatattatatgcaggagccggagttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccactatgctactt 13406720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 17698547 - 17698642
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  17698547 ggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 17698642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 34894394 - 34894489
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  34894394 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacagttaaattgtgtgagctctagccactaggctactt 34894489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 37717388 - 37717483
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  37717388 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 37717483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 9735785 - 9735823
Alignment:
Q  171 cacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  9735785 cacatttaaaatgtgtgagctctagtcactatgctactt 9735823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 13749003 - 13748969
Alignment:
Q  175 tttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||||||||| ||||||    
T  13749003 tttaaaatgtgtgagctctagccactacactactt 13748969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 31024374 - 31024412
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  31024374 tccacatttaaaatgtgtgagctccagccactaggctac 31024412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 36035169 - 36035131
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  36035169 tccacatttaaaatgtgtgagctccagccactaggctac 36035131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 37708771 - 37708809
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  37708771 tccacatttaaaatgtgtgagctccagccactaggctac 37708809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 44053430 - 44053392
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  44053430 tccacatttaaaatgtgtgagctccagccactaggctac 44053392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 2908075 - 2908042
Alignment:
Q  176 ttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||||||| |||||||    
T  2908075 ttaaaatgtgtgagctctagccactaggctactt 2908042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 3189994 - 3189909
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  | ||| |||||||  || |||||||   |||| ||||| |||||||||||||||||||| |||||||    
T  3189994 ggatattgcatattatatgcag--gtcggggttcgaaccccggacactc---cacaattaaattgtgtgagctctagccactaggctactt 3189909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 23858222 - 23858319
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| |||||||||| ||||||||||||||  |  |||||||      |||||| || || |||||||| ||||||||||| |||||||||    
T  23858222 ggatattgcatattatatgcaggggccggagttcgaaccctggacactccaattctccacaatttaattgtgtgagttctagccactaggctacttaa 23858319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 33810720 - 33810757
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  33810720 tccacatttaaaatgtgtgagctccagccactaagcta 33810757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 37669711 - 37669808
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| |||||||||| ||| ||||||||||  ||||||||||      |||||| ||||| ||||| |||||||| || || |||||||||    
T  37669711 ggatattgcattttatatgcagtggctggagttcgaaccccagacactccacttctccacaattaaattgtgtcagctctagtcattaggctacttaa 37669808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 257619 - 257659
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  257619 tccacaattaaattgtgtgagctctagccactaggctactt 257659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 658301 - 658261
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  658301 tccacaattaaattgtgtgagctctagccactaggctactt 658261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 844037 - 843997
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  844037 tccacaattaaattgtgtgagctctagccactaggctactt 843997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 5570919 - 5570955
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    |||||||||||||||||||||| || |||||||||||    
T  5570919 ggatattgcatgttatatgcaggggtcggagttcgaa 5570955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 7763929 - 7763889
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  7763929 tccacaattaaattgtgtgagctctagccactaagctactt 7763889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 7816483 - 7816523
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  7816483 tccacaattaaattgtgtgagctctagccactaggctactt 7816523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 9187213 - 9187173
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  9187213 tccacaattaaattgtgtgagctctagccactaggctactt 9187173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 10568165 - 10568205
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  10568165 tccacaattaaattgtgtgagctctagccactaggctactt 10568205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 11127982 - 11128022
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  11127982 tccacaattaaattgtgtgagctctagccactaggctactt 11128022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 13059167 - 13059127
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||||||||| |||| |||||||| |||||||    
T  13059167 tccacatttaaaatgtgtgtgctccagccactaggctactt 13059127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 17027871 - 17027831
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  17027871 tccacaattaaattgtgtgagctctagccactaggctactt 17027831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 17072553 - 17072513
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  17072553 tccacaattaaattgtgtgagctctagccactaggctactt 17072513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 17558307 - 17558267
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  17558307 tccacaattaaattgtgtgagctctagccactaggctactt 17558267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 17575718 - 17575758
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  17575718 tccacaattaaattgtgtgagctctagccactaggctactt 17575758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 26022272 - 26022320
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc 167  Q
    ||||||||||| |||||||||| |||||| |||||||  ||||||||||    
T  26022272 ggatattgcatattatatgcaggggccggggttcgaaccccagacactc 26022320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 28909545 - 28909585
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  28909545 tccacaattaaattgtgtgagctctagccactaggctactt 28909585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 29514706 - 29514746
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  29514706 tccacaattaaattgtgtgagctctagccactaggctactt 29514746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 32779237 - 32779205
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||||| ||||||    
T  32779237 tccacatttaaaatgtgtgagctctaaccacta 32779205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 34266092 - 34266132
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  34266092 tccacaattaaattgtgtgagctctagccactaggctactt 34266132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 34873166 - 34873198
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||| ||||||||    
T  34873166 tccacatttaaaatgtgtgagctccagccacta 34873198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 36572988 - 36573028
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| ||||||| ||||||||||||||||||||    
T  36572988 tccacaattaaattgtgtgaactctagccactacgctactt 36573028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 38219558 - 38219518
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  38219558 tccacaattaaattgtgtgagctctagccactaggctactt 38219518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 39587627 - 39587667
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  39587627 tccacaattaaattgtgtgagctctagccactaggctactt 39587667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 43186933 - 43186973
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  43186933 tccacaattaaattgtgtgagctctagccactaggctactt 43186973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 12650431 - 12650334
Alignment:
Q  117 aaggatattgcatgttatatgcagaggccggagttcgaagtccaga-----cactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||||||||||||||||| | ||||||||| ||| ||     ||||  |||||| ||||| |||||||||||||||||||| |||||||    
T  12650431 aaggatattgcatgttatatgcagaggtcagagttcgaactccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 12650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 15775764 - 15775851
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||| ||||||||||  |||||||||||||  |||||||||||     | |||| ||||| ||||||||||||||||||||    
T  15775764 ggatattgcatattatatgcaggagccggagttcgaaccccagacactcaacttctacacaattaaattgtgtgagctctagccacta 15775851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 29527187 - 29527230
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  29527187 cactcctccacatttaaaatgtgtgagctctagccactaggcta 29527230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 27579464 - 27579427
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  27579464 tccacatttaaaatgtgtgagctctagccactaggcta 27579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 27818594 - 27818688
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||| ||  |||||| ||| ||| ||||||||| ||    |||||| ||||| |||||||||||||||||||| |||||||    
T  27818594 ggatattgcatattatattcatgggccggggtttgaactccagacacccacttctccacaattaaattgtgtgagctctagccactaggctactt 27818688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 12662713 - 12662810
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca----tccacatttaaaatgtgtgagctctagccactacgctacttaaa 212  Q
    ||||||||||| |||||||||| ||||||||||||||   | ||||||||    || |||||| || |||||||| ||||| ||||| ||||||||||    
T  12662713 ggatattgcatattatatgcaggggccggagttcgaaactcggacactcacttctctacattttaattgtgtgagttctagtcactaagctacttaaa 12662810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 35049570 - 35049602
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||||||||||||    
T  35049570 tccacatttaaaatgtgtgagctctagccacta 35049602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 46021924 - 46021837
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||   |||| ||||| ||| |||||||||||||||| |||||||    
T  46021924 ggatattgcatattatatgcaggagccggggttcgaaccccggacactc---cacaattaaattgtatgagctctagccactaggctactt 46021837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 1570237 - 1570142
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  1570237 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 1570142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 4482643 - 4482548
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  |||||||||||||  || || ||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  4482643 ggatattgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccactaggctactt 4482548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 5431035 - 5430988
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctactta 210  Q
    |||| ||||||||||||||||||||||||| |||||||| | ||||||    
T  5431035 cacttatccacatttaaaatgtgtgagctccagccactaggatactta 5430988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 6438109 - 6438014
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  6438109 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 6438014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 13773193 - 13773288
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  13773193 ggatattgcatattatatgcaggagccggggttcgaatcccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 13773288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 15819646 - 15819551
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  15819646 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 15819551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 16343053 - 16343148
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  16343053 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaagctactt 16343148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 21265681 - 21265776
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  21265681 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 21265776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 48638557 - 48638652
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| ||| || |||||||  |||||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  48638557 ggatattgcattttatatgcaggggctggggttcgaaccccagacaccccacttctccacaattaaactgtgtgagctctagccactaggctactt 48638652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 18911925 - 18911963
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  18911925 cactcctccacatttaaaatgtgtgagctccagccacta 18911963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 32970791 - 32970749
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    |||||| ||||| |||||||||||||||||||| |||||||||    
T  32970791 tccacaattaaattgtgtgagctctagccactaggctacttaa 32970749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 11356833 - 11356874
Alignment:
Q  168 atccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||| |||| |||||| |||||||    
T  11356833 atccacatttaaaatgtgtgagttctaaccactaggctactt 11356874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 1604214 - 1604182
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||||| ||||||    
T  1604214 tccacatttaaaatgtgtgagctctaaccacta 1604182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 2277834 - 2277874
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2277834 tccacaattaaattgtgtgagctctagccactaggctactt 2277874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 7078258 - 7078290
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||||||||||||||| |||||||||    
T  7078258 tccacatttaaaatgtgtgagctttagccacta 7078290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 8984496 - 8984456
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  8984496 tccacaattaaattgtgtgagctctagccactaggctactt 8984456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 12048114 - 12048074
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  12048114 tccacaattaaattgtgtgagctctagccactaggctactt 12048074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 12502244 - 12502204
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  12502244 tccacaattaaattgtgtgagctctagccactaggctactt 12502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 17580342 - 17580390
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc 167  Q
    ||||||||||||||||||||||| | ||| ||||||| ||| |||||||    
T  17580342 ggatattgcatgttatatgcagaagtcggggttcgaactccggacactc 17580390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 18101528 - 18101568
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||| | |||||||||||| |||||||    
T  18101528 tccacatttaaaatgtgttaactctagccactaggctactt 18101568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 18512565 - 18512533
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||| ||||||||    
T  18512565 tccacatttaaaatgtgtgagctccagccacta 18512533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 18534081 - 18534121
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  18534081 tccacaattaaattgtgtgagctctagccactaggctactt 18534121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 28564335 - 28564295
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  28564335 tccacaattaaattgtgtgagctctagccactaggctactt 28564295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 32594331 - 32594371
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  32594331 tccacaattaaattgtgtgagctctagccactaggctactt 32594371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 40519533 - 40519493
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  40519533 tccacaattaaattgtgtgagctctagccactaggctactt 40519493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 47642972 - 47642932
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  47642972 tccacaattaaattgtgtgagctctagccactatgctactt 47642932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 50103941 - 50103981
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||| | |||||||||||| |||||||    
T  50103941 tccacatttaaaatgtgtcaactctagccactaggctactt 50103981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 266742 - 266655
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  ||||||||||   |||| ||||| |||||||||||||||||||| |||||||    
T  266742 ggatattgcatattatatgcaggagccggggttcgaaacccagacactc---cacaattaaattgtgtgagctctagccactaggctactt 266655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 47098757 - 47098852
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  ||||||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  47098757 ggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccactaagctactt 47098852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 7920345 - 7920442
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| |||||||||   ||||| |||||||  || ||||||||     |||||| ||||| |||||||||||||||||||| |||||||||    
T  7920345 ggatattgcatattatatgcaagagccggggttcgaaccccggacactcaacttctccacaattaaattgtgtgagctctagccactaggctacttaa 7920442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 25883978 - 25883938
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  25883978 tccacatttaaaatgtgtgagctccagccactaggctactt 25883938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 4139025 - 4139120
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  4139025 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 4139120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 7269980 - 7270075
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  || || ||||||| ||| |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  7269980 ggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 7270075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 10176948 - 10176853
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  10176948 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactatgctactt 10176853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 10482898 - 10482803
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  || || ||||||| ||| |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  10482898 ggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 10482803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 18194363 - 18194458
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  18194363 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 18194458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 32256599 - 32256512
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccaga-----cactcatccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||| |||||| |||||||  || ||     ||||  |||||| ||||| ||||||||||||||||||||    
T  32256599 ggatattgcatgttatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccacta 32256512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 33225393 - 33225298
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| |||| ||||||||||  ||||| |||||||  ||||||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  33225393 ggatatcgcattttatatgcaggagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccactaagctactt 33225298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 37488505 - 37488410
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| |||| |||||||||| |||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  37488505 ggatatcgcattttatatgcaggggccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 37488410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 37800656 - 37800561
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  37800656 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 37800561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 39719960 - 39720055
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  39719960 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 39720055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 40548328 - 40548423
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  40548328 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactaggctactt 40548423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 40933876 - 40933781
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  40933876 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 40933781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 41936452 - 41936357
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  41936452 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 41936357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 50496859 - 50496764
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  50496859 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 50496764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 53432782 - 53432687
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  53432782 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 53432687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 27329922 - 27329884
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  27329922 tccacatttaaaatgtgtgagctccagccactaggctac 27329884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 41710663 - 41710701
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  41710663 tccacatttaaaatgtgtgagctccagccactaggctac 41710701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 46767423 - 46767461
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  46767423 tccacatttaaaatgtgtgagctccagccactaggctac 46767461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 51879175 - 51879213
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  51879175 tccacatttaaaatgtgtgagctccagccactaggctac 51879213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 4200630 - 4200545
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccac 199  Q
    ||||||||||| |||||||||| || ||| |||||||  |||||||||||     |||||| ||||| ||||||| ||||||||||    
T  4200630 ggatattgcatattatatgcaggggtcggggttcgaaccccagacactcaatttctccacaattaaattgtgtgacctctagccac 4200545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 1538658 - 1538626
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||| ||||||||||||||||    
T  1538658 tccacatttaaaatgtatgagctctagccacta 1538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 2523006 - 2523046
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2523006 tccacaattaaattgtgtgagctctagccactaggctactt 2523046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 6919953 - 6919913
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  6919953 tccacaattaaattgtgtgagctctagccactaggctactt 6919913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 8964766 - 8964726
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  8964766 tccacaattaaattgtgtgagctctagccactaggctactt 8964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 9114091 - 9114131
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||||| || ||||| |||||||    
T  9114091 tccacatttaaaatgtgtgagctccagtcactaggctactt 9114131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 11206070 - 11206110
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  11206070 tccacagttaaattgtgtgagctctagccactaggctactt 11206110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 16906809 - 16906769
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  16906809 tccacaattaaattgtgtgagctctagccactatgctactt 16906769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 30555217 - 30555177
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  30555217 tccacaattaaattgtgtgagctctagccactaggctactt 30555177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 31327491 - 31327451
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  31327491 tccacaattaaattgtgtgagctctagccactaggctactt 31327451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 33706717 - 33706677
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  33706717 tccacaattaaattgtgtgagctctagccactaggctactt 33706677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 39709118 - 39709150
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||| ||||||||    
T  39709118 tccacatttaaaatgtgtgagctccagccacta 39709150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 45701424 - 45701464
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  45701424 tccacaattaaattgtgtgagctctagccactaggctactt 45701464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 46880022 - 46880109
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||||||||  |||||||  ||  ||||   |||||| ||||| |||||||||| ||| ||||| |||||||    
T  46880022 ggatattgcattttatatgcagaggccgaggttcgaaccccgaacac---tccacagttaaattgtgtgagctttagtcactaggctactt 46880109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 48251652 - 48251692
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  48251652 tccacaattaaattgtgtgagctctagccactaggctactt 48251692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 50675732 - 50675692
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  50675732 tccacaattaaattgtgtgagctctagccactaggctactt 50675692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 53906459 - 53906499
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  53906459 tccacaattaaattgtgtgagctctagccactaggctactt 53906499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 16385087 - 16384990
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| |||||||||||| |||| ||||||| ||| |||||||      |||||| ||||| |||||||||||||||||||| | |||||||    
T  16385087 ggatattgcattttatatgcagagaccggggttcgaactccggacactccacttctccacaattaaattgtgtgagctctagccactaggatacttaa 16384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 18862332 - 18862372
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  18862332 tccacatttaaaatgtgtgagctctagccactaggctactt 18862372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 38387688 - 38387775
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| ||| || |||||||  ||||||||   |||||| || || |||||||||||||||||||| |||||||    
T  38387688 ggatattgcatattatatgcaggggctggggttcgaaccccagacac---tccacaatttaattgtgtgagctctagccactaggctactt 38387775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 40535494 - 40535399
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  40535494 ggatattgcatattatatgcaggggccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 40535399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 20296436 - 20296538
Alignment:
Q  112 ttgacaaggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    |||| ||||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| ||||    
T  20296436 ttgataaggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggcta 20296535  T
Q  207 ctt 209  Q
    |||    
T  20296536 ctt 20296538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 4562797 - 4562700
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||||    
T  4562797 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctacttaa 4562700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 5947940 - 5947984
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||    
T  5947940 cactcctccacatttaaaatgtgtgagctccagccactaggctac 5947984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 32854612 - 32854652
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  32854612 tccacatttaaaatgtgtgagctccagccactaggctactt 32854652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 37063545 - 37063624
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||| |||||||||| |||| | ||||||| ||| |||||   |||||| || || ||||||||||||||||||||    
T  37063545 ggatattgcatattatatgcaggggccagggttcgaactccggacac---tccacaatttaattgtgtgagctctagccacta 37063624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 42633511 - 42633479
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctag 195  Q
    |||||||||||||||||||||||||||||||||    
T  42633511 cactcatccacatttaaaatgtgtgagctctag 42633479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 2643722 - 2643817
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  2643722 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaagctactt 2643817  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 13975151 - 13975238
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacac-----tcatccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||| || ||||||||||| ||| |||||     |  | |||| ||||| ||||||||||||||||||||    
T  13975151 ggatattgcatgttatatgcaggggtcggagttcgaactccggacaccccatttcttcacaattaaattgtgtgagctctagccacta 13975238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 33228978 - 33228883
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  33228978 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 33228883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 39408735 - 39408640
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||   ||||| |||||||  ||||||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  39408735 ggatattgcatattatatgcaagagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccactatgctactt 39408640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 41509541 - 41509636
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  41509541 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 41509636  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 15939369 - 15939407
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  15939369 tccacatttaaaatgtgtgagctccagccactaggctac 15939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 44898472 - 44898443
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagcca 198  Q
    ||||||||||||||||||||||||||||||    
T  44898472 tccacatttaaaatgtgtgagctctagcca 44898443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 1260264 - 1260304
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  1260264 tccacaattaaattgtgtgagctctagccactaggctactt 1260304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 1309116 - 1309076
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  1309116 tccacaattaaattgtgtgagctctagccactaggctactt 1309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 1844897 - 1844937
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  1844897 tccacaattaaattgtgtgagctctagccactaggctactt 1844937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 6331641 - 6331681
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  6331641 tccacaattaaattgtgtgagctctagccactaggctactt 6331681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 15233438 - 15233486
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc 167  Q
    ||||||||||| |||||||||| ||||||||||| ||  ||||||||||    
T  15233438 ggatattgcatattatatgcaggggccggagttcaaaccccagacactc 15233486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 17499029 - 17499069
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  17499029 tccacaattaaattgtgtgagctctagccactaggctactt 17499069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 18694865 - 18694905
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  18694865 tccacaattaaattgtgtgagctctagccactaggctactt 18694905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 24439714 - 24439674
Alignment:
Q  171 cacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    |||||||||||||||||||||||| | |||||| |||||||    
T  24439714 cacatttaaaatgtgtgagctctaactactacggtacttaa 24439674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 34125825 - 34125857
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||| ||||||||||    
T  34125825 tccacatttaaaatgtgtgagccctagccacta 34125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 38400394 - 38400434
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  38400394 tccacaattaaattgtgtgagctctagccactaggctactt 38400434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 41196023 - 41195979
Alignment:
Q  112 ttgacaaggatattgcat-gttatatgcagaggccggagttcgaa 155  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||    
T  41196023 ttgacagggataatgcattgttatatgcagaggccggagttcgaa 41195979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 21388548 - 21388635
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||   |||| ||||| |||||||||||||||||||| |||||||    
T  21388548 ggatattgcatattatatgcaggagccggggttcgaaccccggacactc---cacaattaaattgtgtgagctctagccactaagctactt 21388635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 12640634 - 12640539
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  ||||||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  12640634 ggatattgcatattatatgcaggagccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 12640539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 30388552 - 30388465
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||| |||||||||| |||||| |||||||  ||||||||||      |||||| ||||| ||||||||||||||||||||    
T  30388552 ggatattgcatattatatgcaggggccggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctagccacta 30388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 32047114 - 32047206
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagaca-ctca----tccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    |||||||||||||||||||||| |||||| |||||||  || |||| ||||    |||||| ||||| |||||||||||||||||||| ||||    
T  32047114 ggatattgcatgttatatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccactaggcta 32047206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 13702099 - 13702143
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||    
T  13702099 cactcctccacatttaaaatgtgtgagctccagccactaggctac 13702143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 46758316 - 46758360
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||    
T  46758316 cactcctccacatttaaaatgtgtgagctccagccactaggctac 46758360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 29617430 - 29617525
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  29617430 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 29617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 31026244 - 31026339
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  31026244 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 31026339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 32676987 - 32676892
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  32676987 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaagctactt 32676892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 21402818 - 21402776
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    |||||||||||||||||||||||||||||| ||  ||||||||    
T  21402818 tccacatttaaaatgtgtgagctctagccattagtctacttaa 21402776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 32619373 - 32619470
Alignment:
Q  117 aaggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||| ||||||| ||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  32619373 aaggatattgcatattatatgtaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 32619470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 3062854 - 3062894
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  3062854 tccacaattaaattgtgtgagctctagccactaggctactt 3062894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 4960864 - 4960904
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  4960864 tccacaattaaattgtgtgagctctagccactaggctactt 4960904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 10244879 - 10244839
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  10244879 tccacaattaaattgtgtgagctctagccactaggctactt 10244839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 12264079 - 12264115
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  12264079 ggatattgcattttatatgcaggggccggagttcgaa 12264115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 18503470 - 18503430
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||||||||||||||| || |||||| |||||||    
T  18503470 tccacatttaaaatgtgtgagctttaaccactaggctactt 18503430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 21762882 - 21762842
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  21762882 tccacaattaaattgtgtgagctctagccactaggctactt 21762842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 24508906 - 24508946
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  24508906 tccacaattaaattgtgtgagctctagccactaggctactt 24508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 24781110 - 24781150
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  24781110 tccacaattaaattgtgtgagctctagccactaggctactt 24781150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 27510247 - 27510207
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  27510247 tccacaattaaattgtgtgagctctagccactaggctactt 27510207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 28547771 - 28547731
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  28547771 tccacaattaaattgtgtgagctctagccactaggctactt 28547731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 35645679 - 35645719
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  35645679 tccacaattaaattgtgtgagctctagccactaggctactt 35645719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 35950208 - 35950248
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  35950208 tccacaattaaattgtgtgagctctagccactaggctactt 35950248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 43119422 - 43119382
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  43119422 tccacaattaaattgtgtgagctctagccactaggctactt 43119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 46645783 - 46645827
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||| |||||||||||||||||||||||| || ||||| |||||    
T  46645783 cactcctccacatttaaaatgtgtgagctccagtcactaggctac 46645827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 48288446 - 48288367
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||| ||||||||||  ||||  |||||||  || |||||||   |||| ||||| ||||||||||||||||||||    
T  48288446 ggatattgcatattatatgcaggagccgaggttcgaatcccggacactc---cacaattaaattgtgtgagctctagccacta 48288367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 2222564 - 2222659
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccaga-----cactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||||||||||||| |||||| |||||||  || ||     ||||  |||||| ||||| |||||||||||||||||||| |||||||    
T  2222564 ggatattgcatgttatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 2222659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 47929325 - 47929363
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  47929325 tccacatttaaaatgtgtgagctctagccactaggctac 47929363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 10402467 - 10402561
Alignment:
Q  120 gatattgcatgttatatgcagaggccggagttcgaagtccagacac-tca----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||| |||||||||| || |||||||||||  || ||||| |||    |||||| ||||| |||||||||||||||||||| |||||||    
T  10402467 gatattgcatattatatgcaggggtcggagttcgaaccccggacacctcacttctccacaattaaattgtgtgagctctagccactaggctactt 10402561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 45741502 - 45741587
Alignment:
Q  121 atattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccacta 201  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||||     ||||||| ||||| ||||||| ||||| ||||||    
T  45741502 atattgcatgttatatgcaggagccggagttcgaaccccagacactccacttatccacaattaaattgtgtgaactctaaccacta 45741587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 27103146 - 27103054
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||| |||||||      |||||| ||||| |||||||||||||| ||||| ||||    
T  27103146 ggatattgcatattatatgtagaggtcggagttcgaattccggacactccacttctccacaattaaattgtgtgagctctagacactaggcta 27103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 44602510 - 44602597
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  |||| |||   |||||| || || ||||||||||||| |||||| |||||||    
T  44602510 ggatattgcattttatatgcaggggccggggttcgaaccccagccac---tccacaatttaattgtgtgagctctacccactaggctactt 44602597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 7272511 - 7272578
Alignment:
Q  88 aatatcctcgtcaacttagttcgattgacaaggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    ||||||||||| || |||| ||  |||| ||||||||||||| ||||||| || ||||||||||||||    
T  7272511 aatatcctcgtgaatttagctcagttgataaggatattgcatattatatgtaggggccggagttcgaa 7272578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 12582073 - 12581978
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  12582073 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 12581978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 43147429 - 43147334
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  43147429 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 43147334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 43596920 - 43597015
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  43596920 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 43597015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 46775075 - 46774980
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  46775075 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 46774980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 49901507 - 49901602
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  49901507 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccgcttctccacaattaaattgtgtgagctctagccactaggctactt 49901602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 3904417 - 3904463
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||| ||| ||||| |||||||||||||||||||| |||||||    
T  3904417 cactcatctacaattaaattgtgtgagctctagccactatgctactt 3904463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 10407019 - 10406977
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    |||||| ||||| |||||||||||||||||||| |||||||||    
T  10407019 tccacaattaaattgtgtgagctctagccactaggctacttaa 10406977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 23142743 - 23142705
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  23142743 tccacatttaaaatgtgtgagctccagccactaggctac 23142705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 23176712 - 23176674
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  23176712 tccacatttaaaatgtgtgagctccagccactaggctac 23176674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 30305879 - 30305917
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  30305879 tccacatttaaaatgtgtgagctccagccactaggctac 30305917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 31187536 - 31187498
Alignment:
Q  163 cactcatccacatttaaaatgtgtgagctctagccacta 201  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  31187536 cacttatccacatttaaaatgtgtgagctctaaccacta 31187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 36099173 - 36099135
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  36099173 tccacatttaaaatgtgtgagctccagccactaggctac 36099135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 13161828 - 13161865
Alignment:
Q  171 cacatttaaaatgtgtgagctctagccactacgctact 208  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  13161828 cacatttaaaatttgtgagctctagccactaggctact 13161865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 35948227 - 35948133
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| |||| ||||||||||  ||||| |||||||  || |||||||     |||||| ||||| |||||||||||||||||||| |||||||    
T  35948227 ggatatcgcattttatatgcaggagccggggttcgaaccccggacactccactctccacaattaaattgtgtgagctctagccactaggctactt 35948133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 624560 - 624592
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||||| ||||||    
T  624560 tccacatttaaaatgtgtgagctctaaccacta 624592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 2688176 - 2688215
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  2688176 tccacatttaaa-tgtgtgagctctagccactaggctactt 2688215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 3036045 - 3036005
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  3036045 tccacaattaaattgtgtgagctctagccactaggctactt 3036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 5305000 - 5304960
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  5305000 tccacaattaaattgtgtgagctctagccactaggctactt 5304960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 10141063 - 10141103
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  10141063 tccacaattaaattgtgtgagctctagccactaggctactt 10141103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 33933729 - 33933689
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||| ||||||||| |||||||    
T  33933729 tccacatttaatatgtgtgagctatagccactaggctactt 33933689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 40051702 - 40051742
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  40051702 tccacaattaaattgtgtgagctctagccactaggctactt 40051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 40994093 - 40994053
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  40994093 tccacaattaaattgtgtgagctctagccactaggctactt 40994053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 48950864 - 48950904
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  48950864 tccacaattaaattgtgtgagctctagccactaggctactt 48950904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 49757274 - 49757234
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  49757274 tccacaattaaattgtgtgagctctagccactaggctactt 49757234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 52731429 - 52731389
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  52731429 tccacaattaaattgtgtgagctctagccactaggctactt 52731389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 53634241 - 53634201
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  53634241 tccacaattaaattgtgtgagctctagccactaggctactt 53634201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 55536459 - 55536499
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  55536459 tccacaattaaattgtgtgagctctagccactaggctactt 55536499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 361188 - 361285
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctacttaa 211  Q
    ||||||||||| ||||||||||  ||||  ||||||| ||||||||| |      |||| ||||||||| |||||||||||||||||| |||||||||    
T  361188 ggatattgcatattatatgcaggagccgaggttcgaactccagacaccccacttctccatatttaaaatatgtgagctctagccactatgctacttaa 361285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 2500559 - 2500467
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactc-----atccacatttaaaatgtgtgagctctagccactacgcta 206  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||| |||||||      |||||| ||||| |||||||||||||| ||||| ||||    
T  2500559 ggatattgcatattatatgtagaggtcggagttcgaattccggacactccacttctccacaattaaattgtgtgagctctagacactaggcta 2500467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 7207869 - 7207964
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  7207869 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccatttctccacaattaaattgtgtgagctctagccactaggctactt 7207964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 8857115 - 8857203
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||| ||| |||||||||| |||||| |||||||  ||   ||||  |||||| ||||| |||||||||||||||||||| |||||||    
T  8857115 ggatattacatattatatgcaggggccggggttcgaaccccc--cacttctccacaattaaattgtgtgagctctagccactaggctactt 8857203  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 10517224 - 10517319
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| || ||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  10517224 ggatattgcattttatatgcaggggtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 10517319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 17441884 - 17441789
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  17441884 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 17441789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 19953873 - 19953778
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  19953873 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 19953778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 32611599 - 32611504
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  ||||| |||||||  || |||||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  32611599 ggatattgcatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactaggctactt 32611504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 32621621 - 32621534
Alignment:
Q  125 tgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctac 207  Q
    ||||| |||||||||| |||||| |||||||  |||||||| |      |||||||||||||||||||||||| |||||||| |||||    
T  32621621 tgcattttatatgcaggggccggggttcgaatcccagacaccccacttctccacatttaaaatgtgtgagctccagccactaggctac 32621534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 6329851 - 6329821
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccac 199  Q
    |||||||||||||||||||||||||||||||    
T  6329851 tccacatttaaaatgtgtgagctctagccac 6329821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 7414354 - 7414444
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||  |||| | ||||||| ||  ||||||  |||||| || || |||||||||| ||||||||| |||||||    
T  7414354 ggatattgcatattatatgcaagggccagggttcgaactctggacacttctccacaatttaattgtgtgagctatagccactaggctactt 7414444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 2816970 - 2817010
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2816970 tccacaattaaattgtgtgagctctagccactaggctactt 2817010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 3794163 - 3794123
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  3794163 tccacaattaaattgtgtgagctctagccactaggctactt 3794123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 4408383 - 4408470
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactcatccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| ||| || |||||||   |||||||   |||||| || || |||||||||||| ||||||| |||||||    
T  4408383 ggatattgcatattatatgcaggggctggggttcgaaccacagacac---tccacaatttaattgtgtgagctctggccactaggctactt 4408470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 5052064 - 5052024
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  5052064 tccacaattaaattgtgtgagctctagccactaggctactt 5052024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 7328637 - 7328597
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  7328637 tccacaattaaattgtgtgagctctagccactaggctactt 7328597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 7581124 - 7581164
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  7581124 tccacaattaaattgtgtgagctctagccactaggctactt 7581164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 9704496 - 9704536
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  9704496 tccacaattaaattgtgtgagctctagccactaggctactt 9704536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 13116614 - 13116574
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  13116614 tccacaattaaattgtgtgagctctagccactaggctactt 13116574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 18904345 - 18904377
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||| ||||||||    
T  18904345 tccacatttaaaatgtgtgagctccagccacta 18904377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 27218964 - 27219004
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  27218964 tccacaattaaattgtgtgagctctagccactaggctactt 27219004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 28148723 - 28148683
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  28148723 tccacaattaaattgtgtgagctctagccactaggctactt 28148683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 28222888 - 28222924
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  28222888 ggatattgcatattatatgcagaggccggggttcgaa 28222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 28842734 - 28842774
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  28842734 tccacaattaaattgtgtgagctctagccactaggctactt 28842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 32142026 - 32141994
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccacta 201  Q
    |||||||||||||||||||||||| ||||||||    
T  32142026 tccacatttaaaatgtgtgagctccagccacta 32141994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 33573897 - 33573937
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  33573897 tccacaattaaattgtgtgagctctagccactaggctactt 33573937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 33646915 - 33646955
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  33646915 tccacaattaaattgtgtgagctctagccactaggctactt 33646955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 8991 - 9086
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| ||||||||||  |||||||||||||  || || ||||      |||||| ||||| |||||||||||||||||||| |||||||    
T  8991 ggatattgcatattatatgcaggagccggagttcgaaccccggatactccacttctccacaattaaattgtgtgagctctagccactaggctactt 9086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 10871 - 10776
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaagtccagacactca-----tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||| |      |||||| ||||| |||||||||||||||||||| |||||||    
T  10871 ggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaattgtgtgagctctagccactaggctactt 10776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1787 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 395 - 461
Alignment:
Q  89 atatcctcgtcaacttagttcgattgacaaggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    |||||| ||| ||||||| || ||||| | ||||||||||| |||||||||| |||||| |||||||    
T  395 atatccccgtgaacttagctcaattgatagggatattgcatattatatgcaggggccggggttcgaa 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 2383 - 2343
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  2383 tccacaattaaattgtgtgagctctagccactaggctactt 2343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 3746 - 3786
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  3746 tccacaattaaattgtgtgagctctagccactaggctactt 3786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 12539 - 12579
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  12539 tccacaattaaattgtgtgagctctagccactaggctactt 12579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 1342 - 1382
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  1342 tccacaattaaattgtgtgagctctagccactaagctactt 1382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 1397 - 1437
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  1397 tccacaattaaattgtgtgagctctagccactaagctactt 1437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 17700 - 17740
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  17700 tccacaattaaattgtgtgagctctagccactaggctactt 17740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 23386 - 23422
Alignment:
Q  119 ggatattgcatgttatatgcagaggccggagttcgaa 155  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  23386 ggatattgcatattatatgcagaggccggggttcgaa 23422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 112188 - 112228
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  112188 tccacaattaaattgtgtgagctctagccactaggctactt 112228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 12251 - 12211
Alignment:
Q  169 tccacatttaaaatgtgtgagctctagccactacgctactt 209  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  12251 tccacaattaaattgtgtgagctctagccactaggctactt 12211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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