View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9845_low_17 (Length: 328)
Name: NF9845_low_17
Description: NF9845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9845_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 11 - 312
Target Start/End: Original strand, 32851691 - 32851988
Alignment:
| Q |
11 |
cagagagagtatacaatattcaggtctagtgatactatcagcaagtgatgacaattatcaaccattgtagtgttccctaattttcttttacttcatgtga |
110 |
Q |
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| T |
32851691 |
cagagagagtatacaatattcaggtctagtgatactatcagcaagtaatgacaattatcaaccattgtagtgttccctaattttcttttacttcatgtga |
32851790 |
T |
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| Q |
111 |
acaagatatgttacataggtatcatgttccaagttctactaatacacacacagtcattcaaaccagctttgttttccttctagacatgttcctttcacca |
210 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32851791 |
acaagatatgttacataggtatcatg----aagttctactaatacacacacagtcattcaaaccagctttattttccttctagacatgttcctttcacca |
32851886 |
T |
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| Q |
211 |
aaggtttttaccatcgtgcgaaaattccaaaaataggcatttatattgatagaagagaaacaaaaaaggtcaatattttggcgatcatgtaatagttggt |
310 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32851887 |
aaggtttttaccgtcgtgcgaaaattccaaaaataggcatttatattgatagaagagaaacaaaaaaggtcaatattttggcgatcatgtaatagttggt |
32851986 |
T |
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