View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9846_16 (Length: 319)

Name: NF9846_16
Description: NF9846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9846_16
NF9846_16
[»] chr6 (74 HSPs)
chr6 (1-291)||(26057276-26057566)
chr6 (1-291)||(26077246-26077536)
chr6 (2-291)||(26144222-26144511)
chr6 (1-291)||(25512245-25512535)
chr6 (2-291)||(25484413-25484702)
chr6 (2-291)||(25581076-25581365)
chr6 (3-290)||(27529844-27530131)
chr6 (2-291)||(27215806-27216095)
chr6 (40-290)||(27426189-27426439)
chr6 (40-292)||(31285912-31286164)
chr6 (40-292)||(27717073-27717328)
chr6 (40-292)||(27609694-27609949)
chr6 (1-97)||(25546531-25546627)
chr6 (123-292)||(26885420-26885589)
chr6 (121-292)||(26647832-26648003)
chr6 (121-292)||(26753800-26753971)
chr6 (121-292)||(26803799-26803970)
chr6 (37-291)||(26862934-26863182)
chr6 (40-292)||(27697163-27697415)
chr6 (128-292)||(27603369-27603533)
chr6 (13-292)||(26624624-26624897)
chr6 (13-292)||(26730601-26730874)
chr6 (123-292)||(28787591-28787760)
chr6 (123-292)||(28793712-28793881)
chr6 (40-292)||(27704837-27705083)
chr6 (5-95)||(26637193-26637283)
chr6 (5-95)||(26743159-26743249)
chr6 (119-292)||(26657315-26657488)
chr6 (119-292)||(26763286-26763459)
chr6 (10-89)||(27680521-27680600)
chr6 (128-292)||(25491984-25492148)
chr6 (5-89)||(28787812-28787896)
chr6 (5-89)||(28793933-28794017)
chr6 (5-96)||(2186369-2186460)
chr6 (40-95)||(26850277-26850332)
chr6 (123-292)||(27680303-27680472)
chr6 (5-82)||(27603234-27603311)
chr6 (247-291)||(25539897-25539941)
chr6 (40-88)||(26804018-26804066)
chr6 (40-95)||(27591589-27591644)
chr6 (5-95)||(25075432-25075522)
chr6 (5-89)||(25491846-25491930)
chr6 (4-96)||(29827541-29827633)
chr6 (40-95)||(27676188-27676243)
chr6 (120-186)||(26938488-26938554)
chr6 (40-89)||(26648029-26648078)
chr6 (40-97)||(26657525-26657582)
chr6 (40-89)||(26753997-26754046)
chr6 (40-97)||(26763496-26763553)
chr6 (119-188)||(26825276-26825345)
chr6 (40-97)||(26825376-26825433)
chr6 (40-97)||(26885633-26885690)
chr6 (40-97)||(28141089-28141146)
chr6 (40-96)||(26951295-26951351)
chr6 (5-89)||(26978939-26979023)
chr6 (156-278)||(27591714-27591836)
chr6 (214-292)||(28244148-28244226)
chr6 (212-290)||(29842741-29842819)
chr6 (215-292)||(26825172-26825249)
chr6 (209-278)||(27676366-27676435)
chr6 (40-89)||(28150734-28150783)
chr6 (209-293)||(2186178-2186262)
chr6 (40-96)||(28097023-28097079)
chr6 (40-95)||(26813102-26813157)
chr6 (206-249)||(28097186-28097229)
chr6 (3-89)||(26938582-26938668)
chr6 (214-292)||(27663965-27664043)
chr6 (217-291)||(28326832-28326906)
chr6 (217-291)||(28504468-28504542)
chr6 (212-290)||(29827341-29827419)
chr6 (40-89)||(27663777-27663826)
chr6 (169-242)||(29695092-29695165)
chr6 (4-96)||(28186955-28187047)
chr6 (40-88)||(29842563-29842611)
[»] scaffold0003 (1 HSPs)
scaffold0003 (40-290)||(60924-61174)
[»] chr4 (5 HSPs)
chr4 (40-290)||(18075116-18075366)
chr4 (34-97)||(18730068-18730131)
chr4 (5-95)||(18678101-18678191)
chr4 (34-95)||(18697973-18698034)
chr4 (40-95)||(18654056-18654111)
[»] scaffold0349 (1 HSPs)
scaffold0349 (40-292)||(2113-2368)
[»] chr1 (5 HSPs)
chr1 (5-292)||(266888-267169)
chr1 (121-280)||(28126333-28126492)
chr1 (119-292)||(28132157-28132330)
chr1 (2-282)||(26137251-26137528)
chr1 (40-97)||(28126258-28126315)
[»] chr8 (2 HSPs)
chr8 (40-293)||(29272412-29272668)
chr8 (3-96)||(16371671-16371764)
[»] scaffold1870 (2 HSPs)
scaffold1870 (123-292)||(122-291)
scaffold1870 (40-99)||(330-389)
[»] scaffold0419 (2 HSPs)
scaffold0419 (123-292)||(8840-9009)
scaffold0419 (40-99)||(9048-9107)
[»] scaffold0277 (4 HSPs)
scaffold0277 (123-292)||(12335-12504)
scaffold0277 (123-293)||(3372-3542)
scaffold0277 (21-88)||(3258-3325)
scaffold0277 (21-88)||(12221-12288)
[»] chr2 (2 HSPs)
chr2 (5-88)||(17991739-17991822)
chr2 (212-292)||(3281012-3281092)
[»] chr3 (1 HSPs)
chr3 (169-242)||(615199-615272)
[»] chr5 (2 HSPs)
chr5 (174-242)||(13717603-13717671)
chr5 (2-97)||(16692412-16692507)
[»] scaffold0038 (1 HSPs)
scaffold0038 (214-292)||(44310-44388)


Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 74)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 26057566 - 26057276
Alignment:
Q  1 cgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgag 100  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26057566 cgaaaccacaacctactgcgttctccaggcttattgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgag 26057467  T
Q  101 tgtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   |||| ||    
T  26057466 tgtcatattcccaatggcctatgagagatttttcagccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctt 26057367  T
Q  201 tgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26057366 tgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 26057276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 26077536 - 26077246
Alignment:
Q  1 cgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgag 100  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26077536 cgaaaccacaacctactgcgttctccaggcttcttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgag 26077437  T
Q  101 tgtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   |||| ||    
T  26077436 tgtcatattcccaatggcctatgagagatttttcagccaacactccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctt 26077337  T
Q  201 tgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26077336 tgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 26077246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 26144511 - 26144222
Alignment:
Q  2 gaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagt 101  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  26144511 gaaaccacaacctactgcgttctccaggcttgttgggagattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcacataagt 26144412  T
Q  102 gtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaactttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||    
T  26144411 gtcatattcccaatggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaaccttt 26144312  T
Q  202 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26144311 gtccattcacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 26144222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 25512535 - 25512245
Alignment:
Q  1 cgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgag 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  25512535 cgaaaccacaacctactgcgttctccaggcttgttgggagattcttgtcggacggtttctttacccatgtcctctatcaagtcatgtaaggtcacataag 25512436  T
Q  101 tgtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||    
T  25512435 tgtcatattcccaatggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttt 25512336  T
Q  201 tgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25512335 tgtccatttataccctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 25512245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 25484702 - 25484413
Alignment:
Q  2 gaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagt 101  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25484702 gaaaccacaacctactgcgttctccaggcttcttgggagattcttgtcgaacgacttctttacccatgtcctctatcaagtcatgtaaggtcacataagt 25484603  T
Q  102 gtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaactttt 201  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | ||||||    
T  25484602 gtcatattcccaatgacctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttactttt 25484503  T
Q  202 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25484502 gtccatttataccctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 25484413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 25581365 - 25581076
Alignment:
Q  2 gaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagt 101  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||    
T  25581365 gaaaccacaacctactgcgttctccagggttcttgggagattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcatctgagt 25581266  T
Q  102 gtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaactttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||    
T  25581265 gtcatattcccaatggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaaccttt 25581166  T
Q  202 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||   | ||||||||||||||| ||||||||||||    
T  25581165 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactcttctcctttggttccaaagcatcatagctaacttgaagtatc 25581076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 3 - 290
Target Start/End: Original strand, 27529844 - 27530131
Alignment:
Q  3 aaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtg 102  Q
    ||||||||||||||||||||||||||||   | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |     
T  27529844 aaaccacaacctactgcgttctccaggctcatcgggtgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacataacta 27529943  T
Q  103 tcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttg 202  Q
    ||||||| | ||||| | |||||| ||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||  | || | ||    
T  27529944 tcatatttcaaatggtccatgagagatttttcagccaaaactgcaacatgatgtactatgcaatgaccataatgagcatgaagtatttctttgacctctg 27530043  T
Q  203 tccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 290  Q
     ||||||||||||||||||||||||||||||||||||||||||||| || || | || || ||||| ||||||||| |||| ||||||    
T  27530044 gccatttacaccctttgaagcaacaagcaatgtctagaaagacactttgctcttctttctccaaagaatcatagctcactttaagtat 27530131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 27216095 - 27215806
Alignment:
Q  2 gaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagt 101  Q
    |||||||||||||||||||||| |||||  ||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||||||||  ||| || | |    
T  27216095 gaaaccacaacctactgcgttccccaggattgtcgggtgattcttgtcggacaacttctctacccatatcctctatcaagtcatgtaatctcatataact 27215996  T
Q  102 gtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaactttt 201  Q
     |||| |||||  |||   |||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||  | || |||    
T  27215995 atcattttcccggtggttaatgagagatttttcggccaacacttcaacatgatgttttatgcaatggccataatgggcatgaagtatatctttgaccttt 27215896  T
Q  202 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || |||||||||||| |||| |||||||    
T  27215895 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactcttctccttttcctccagagcatcatagctgactttaagtatc 27215806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 290
Target Start/End: Original strand, 27426189 - 27426439
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 139  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| | || |||||  ||||| | ||||||||||||||| | |    
T  27426189 gattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgtattcaaaatggtcaatgagacatttttcaacta 27426288  T
Q  140 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctag 239  Q
     |||| |||||||||| | ||||||||| |||||||||||||||||||||||  | || |||  ||||||||| ||||||||||||||||||||||||||    
T  27426289 gcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctag 27426388  T
Q  240 aaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 290  Q
    ||||||||| || |||| ||||| ||||| ||||||||| |||| ||||||    
T  27426389 aaagacactttgctcctcttcctccaaagaatcatagctcactttaagtat 27426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 292
Target Start/End: Complemental strand, 31286164 - 31285912
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |   |||||||||||| || |||||||| ||||||||||||    
T  31286164 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatcccacacaaccatcatattcccaacggtctatgagagatttttcagcca 31286065  T
Q  140 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctag 239  Q
    ||||| | | |||||||  |||||||||||||||||||||||| ||||| ||  | || |  | ||||   || ||||||||||||||||||||||| ||    
T  31286064 acacttctagatgatgtgttatgcaatggccataatgagcatggagtatatctttgacatccgcccatccgcatcctttgaagcaacaagcaatgtccag 31285965  T
Q  240 aaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||| |||| ||| | |||||||||||||||||||| ||||||||    
T  31285964 aaagacactctgctcctcttcttccaaagcatcatagcttactttaagtatct 31285912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 292
Target Start/End: Original strand, 27717073 - 27717328
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc--aatggc-ctatgagacatttttcag 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  |||||||||||  |||  |  ||||||| ||||||||     
T  27717073 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaa 27717172  T
Q  137 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtc 236  Q
    |||||||||| | |||||||  |||||||||||||||||||| || |||||| |   |  | | |  ||||||||| | |||||||||||||||||||||    
T  27717173 ccaacactcctagatgatgtgttatgcaatggccataatgagaattaagtatatatttggcatcttcccatttacatcttttgaagcaacaagcaatgtc 27717272  T
Q  237 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||| || | || ||||| |||||||||||| ||||||| ||||||||    
T  27717273 tagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatct 27717328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 40 - 292
Target Start/End: Original strand, 27609694 - 27609949
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaa---tggcctatgagacatttttcag 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  |  ||||||||||   ||| |||||||| |||||||||    
T  27609694 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgcgatattcccaatattggtctatgagagatttttcag 27609793  T
Q  137 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtc 236  Q
    |||||||||| | |||||||  |||| ||||||||||||||| ||||||| | | | |  | | |  ||| ||| | |||||||||||||||||||||||    
T  27609794 ccaacactcctagatgatgtgttatggaatggccataatgagaatgaagtgtatactttgcatcttcccaattatatcctttgaagcaacaagcaatgtc 27609893  T
Q  237 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
     ||||||||||| || |||| ||| | ||||| ||||||||| |||| ||||||||    
T  27609894 cagaaagacactttgctcctcttcttccaaagaatcatagctcactttaagtatct 27609949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25546627 - 25546531
Alignment:
Q  1 cgaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25546627 cgaaaccacaacctactgcgttctccaggcttgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 25546531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 26885589 - 26885420
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaag 222  Q
    |||| |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    || | ||||||||||||||||||||||    
T  26885589 gagagatttttcgaccaacactccaacatgatgttttatgcaatggccataatgagcatgaagtatatcttcgacctctgtccatttacaccctttgaag 26885490  T
Q  223 caacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||| || || ||||||||||| || |||| |||||  ||||||||||||||||||| ||||||||    
T  26885489 caacaagctatatccagaaagacactttgctcctcttcctctaaagcatcatagcttactttaagtatct 26885420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 26648003 - 26647832
Alignment:
Q  121 atgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttg 219  Q
    |||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||  | ||||||| ||  | ||||  |  |||| |||| ||||||    
T  26648003 atgagagatttttcagccaacactccaagatgatgtgttatgcaatggccataatgataacgaagtatatcttcaaactcctc-ccatctacatcctttg 26647905  T
Q  220 aagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||||    
T  26647904 aagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatct 26647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 26753971 - 26753800
Alignment:
Q  121 atgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttg 219  Q
    |||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||  | ||||||| ||  | ||||  |  |||| |||| ||||||    
T  26753971 atgagagatttttcagccaacactccaagatgatgtgttatgcaatggccataatgataacgaagtatatcttcaaactcctc-ccatctacatcctttg 26753873  T
Q  220 aagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||||    
T  26753872 aagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatct 26753800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 121 - 292
Target Start/End: Complemental strand, 26803970 - 26803799
Alignment:
Q  121 atgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttg 219  Q
    |||||| ||||||||||||||||||| | |||||||  ||||||||||||||||||| |||||||||| ||  | ||||  |  ||||  ||| ||||||    
T  26803970 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgaacatgaagtatatcttcaaactcctc-ccatccacatcctttg 26803872  T
Q  220 aagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||||||||||||||||||||||| | || ||||| |||||||||||||||||||| ||||||||    
T  26803871 aagcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatct 26803799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 37 - 291
Target Start/End: Complemental strand, 26863182 - 26862934
Alignment:
Q  37 ggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcag 136  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||  |    |||||      |||  ||||||| |||||||||    
T  26863182 ggagattcttgtcggacgatttctttgcccatgtcctctatcaagtcatgtaatctcacactaagaccatat------tggtatatgagagatttttcag 26863089  T
Q  137 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtc 236  Q
    ||||||||||||||||||||| ||||||  |||||||||||   | |||||| ||    | || | ||||  ||| ||||||||| ||||||||||| ||    
T  26863088 ccaacactccaacatgatgttttatgcatcggccataatgatatttaagtatatcttcgaattctatccagctaccccctttgaaacaacaagcaatatc 26862989  T
Q  237 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||||| || | || ||| | |||||||||||||||||||| |||||||    
T  26862988 tagaaagacactttgctgctcttcttccaaagcatcatagcttactttaagtatc 26862934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 40 - 292
Target Start/End: Original strand, 27697163 - 27697415
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc---aatggcctatgagacatttttcag 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    |||||||||   | |||  ||||||| |||||||||    
T  27697163 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacacaa---ccatattccctatattggtttatgagagatttttcag 27697259  T
Q  137 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtc 236  Q
    |||||||| | | |||||||  |||| |||||||||||||||||||||| || |   |  | | |  ||||  |   |||||||||||||||||||||||    
T  27697260 ccaacactgctagatgatgtgttatggaatggccataatgagcatgaagcatatatttggcatcttcccatccatgtcctttgaagcaacaagcaatgtc 27697359  T
Q  237 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
     ||||||||||| || |||| ||| | ||||||||||||||| |||  ||||||||    
T  27697360 cagaaagacactttgctcctcttcttccaaagcatcatagctcactctaagtatct 27697415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 27603369 - 27603533
Alignment:
Q  128 atttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaaca 227  Q
    ||||||||||||||||||| | |||||||  |||||||||||||||||||||| ||||||| ||   |||   |  | ||  ||| ||||||||||||||    
T  27603369 atttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaccacttccaatccacatcctttgaagcaaca 27603468  T
Q  228 agcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||||||||||||||| | || ||||| |||||||||||||||||||| ||| ||||    
T  27603469 agcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagaatct 27603533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 292
Target Start/End: Complemental strand, 26624897 - 26624624
Alignment:
Q  13 ctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc 112  Q
    ||||| ||||||||||||   || || |||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |   | | ||        
T  26624897 ctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctatcaagtcatgtaaggtcatatcaccataagat---- 26624802  T
Q  113 aatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttc-cctaacttttgtccatttac 211  Q
      ||   |||||||||||| ||| |||||||||| | |||||||  |||||||||||||||||||||| |||| || ||  | ||| |   |||||  ||    
T  26624801 --tgatatatgagacatttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagcatatcttcgaac-tccctccatccac 26624705  T
Q  212 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    | |||||  ||||||||||||| ||||||||||||||||| |||| ||| | ||||||||||||||| |||| ||||||||    
T  26624704 atcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatct 26624624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 292
Target Start/End: Complemental strand, 26730874 - 26730601
Alignment:
Q  13 ctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc 112  Q
    ||||| ||||||||||||   || || |||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |   | | ||        
T  26730874 ctacttcgttctccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctatcaagtcatgtaaggtcatatcaccataagat---- 26730779  T
Q  113 aatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttc-cctaacttttgtccatttac 211  Q
      ||   |||||||||||| ||| |||||||||| | |||||||  |||||||||||||||||||||| |||| || ||  | ||| |   |||||  ||    
T  26730778 --tgatatatgagacatttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagcatatcttcgaac-tccctccatccac 26730682  T
Q  212 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    | |||||  ||||||||||||| ||||||||||||||||| |||| ||| | ||||||||||||||| |||| ||||||||    
T  26730681 atcctttcgagcaacaagcaatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatct 26730601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 28787760 - 28787591
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||||||||||||||||| | |||||||  |||||||||||||||||||||| ||||||| ||  | ||||  |  ||| | ||| ||||||||    
T  28787760 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctc-ccactcacatcctttgaa 28787662  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||| |||||||||||||| ||||| || | || ||||| |||||||||||||||||||| ||||||||    
T  28787661 gcaacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtatct 28787591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 28793881 - 28793712
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||||||||||||||||| | |||||||  |||||||||||||||||||||| ||||||| ||  | ||||  |  ||| | ||| ||||||||    
T  28793881 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctc-ccactcacatcctttgaa 28793783  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||| |||||||||||||| ||||| || | || ||||| |||||||||||||||||||| ||||||||    
T  28793782 gcaacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtatct 28793712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 40 - 292
Target Start/End: Original strand, 27704837 - 27705083
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 139  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| |   | || |        | |||||||  | ||||||||||    
T  27704837 gattcttgtcggacgacttctttacccatatcctctatcaagttatgtaatgtcacataacaataattt------gtgtctatgagtgacttttcagcca 27704930  T
Q  140 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctag 239  Q
    ||||||  | |||||||  ||| |||||| ||||||||| ||||||||| |    ||| | |||| || || ||||||| ||||||||||||||||| ||    
T  27704931 acactcgtagatgatgtgttatacaatggtcataatgagaatgaagtatattttcaacctctgtcaatctatacccttttaagcaacaagcaatgtcaag 27705030  T
Q  240 aaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||| |||| ||| | ||||||||||||||| |||  ||||||||    
T  27705031 aaagacactctgctcctcttcttccaaagcatcatagctcactctaagtatct 27705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 26637283 - 26637193
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    |||||||||||||||||||||||||| | ||  | |||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||    
T  26637283 accacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatcaagtcatgtaatgtcac 26637193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 26743249 - 26743159
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    |||||||||||||||||||||||||| | ||  | |||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||    
T  26743249 accacaacctactgcgttctccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatcaagtcatgtaatgtcac 26743159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 292
Target Start/End: Complemental strand, 26657488 - 26657315
Alignment:
Q  119 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacacccttt 218  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||| |||||| ||||| | ||    || |   || || |||| |||||    
T  26657488 ctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctacatccttt 26657389  T
Q  219 gaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||  ||||||| || |||| ||||||||| || |||| ||||| |||| ||||||||||||||| ||||||||    
T  26657388 gaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtatct 26657315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 119 - 292
Target Start/End: Complemental strand, 26763459 - 26763286
Alignment:
Q  119 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacacccttt 218  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||| |||||| ||||| | ||    || |   || || |||| |||||    
T  26763459 ctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctacatccttt 26763360  T
Q  219 gaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||  ||||||| || |||| ||||||||| || |||| ||||| |||| ||||||||||||||| ||||||||    
T  26763359 gaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtatct 26763286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 27680600 - 27680521
Alignment:
Q  10 aacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||||||| ||||||||||||   || || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27680600 aacctacttcgttctccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctttatcaagtcatgtaa 27680521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 25491984 - 25492148
Alignment:
Q  128 atttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaaca 227  Q
    |||||| |||||||  ||||| |||||  | || |||||||||||||||| |||||||||| |   | || |  | |||||| || ||||||||| ||||    
T  25491984 attttttagccaactttccaagatgatagtttacgcaatggccataatgatcatgaagtatatttttgacatccgcccatttccaacctttgaagaaaca 25492083  T
Q  228 agcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    ||  ||||||||||||| |||||| |||||||||| ||||||||||||||| |||  ||||||||    
T  25492084 agtcatgtctagaaagatactctgctccttttcctccaaagcatcatagctcactctaagtatct 25492148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 28787896 - 28787812
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||| |||||||| | ||||||||||   || || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28787896 accataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttctatcaagtcatgtaa 28787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 28794017 - 28793933
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||| |||||||| | ||||||||||   || || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28794017 accataacctacttctttctccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttctatcaagtcatgtaa 28793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 2186460 - 2186369
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 96  Q
    ||||||||||||| |||| |||||||   || || ||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||    
T  2186460 accacaacctactacgttttccaggctcttttggtgattcttgtcgtacgatttctttacccatttcctctatcaagtcatgtaatgtcaca 2186369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 26850332 - 26850277
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  26850332 gattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaatgtcac 26850277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 27680472 - 27680303
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||| ||||||||||||| | |||||||  |||||||||| |||||||||||  |||||| ||  | ||||  | |||||| | | ||||||||    
T  27680472 gagagattttccagccaacactcctagatgatgtgttatgcaatggtcataatgagcacaaagtatatcttcgaactcct-tccattgatatcctttgaa 27680374  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    ||| ||||| ||||| |||||||||||||| |||| ||| | ||||||||||||||| || | ||||||||    
T  27680373 gcagcaagcgatgtcaagaaagacactctgctcctcttcttccaaagcatcatagctcaccttaagtatct 27680303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 27603234 - 27603311
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagt 82  Q
    |||| |||||||| | ||||||||||   || || |||||||||||||||||||||||||||||||||||||||||||    
T  27603234 accataacctacttctttctccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctctatcaagt 27603311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 291
Target Start/End: Complemental strand, 25539941 - 25539897
Alignment:
Q  247 ctctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25539941 ctctgatccttttccttcaaagcatcatagcttacttgaagtatc 25539897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 26804066 - 26804018
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 88  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26804066 gattcttgtcggacgacttctttacccatgtcctttatcaagtcatgta 26804018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 27591589 - 27591644
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  27591589 gattcttgtcggacgacttctttacccatgacctctatcaattcatgtaatgtcac 27591644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 25075522 - 25075432
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    ||||||||||||| ||||||||||||   ||    ||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  25075522 accacaacctactacgttctccaggctctttaattgattcatgtcggacgatttctttacccatgtcctctaacaagtcatgtaatgtcac 25075432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 25491846 - 25491930
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    ||||||||||||| |||||||||||    ||  | ||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  25491846 accacaacctactacgttctccaggatcattacgtgattcttgtcgaacgacttctttacccatgtgctctatcaagttatgtaa 25491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 29827633 - 29827541
Alignment:
Q  4 aaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 96  Q
    |||||||||||||| || | |||||||   || || ||||||||||| || | ||||||||||||||| ||||||||||||||||| ||||||    
T  29827633 aaccacaacctactacgctttccaggctctttcggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaatgtcaca 29827541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 27676188 - 27676243
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||    
T  27676188 gattcttgtcggaccacttctttacccatgacctctatcaattcatgtaatgtcac 27676243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 26938554 - 26938488
Alignment:
Q  120 tatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagt 186  Q
    ||||||| |||| | | |||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  26938554 tatgagagatttattaaccaacactccaacatgattttttatgcaatgaccataatgagcatgaagt 26938488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 26648078 - 26648029
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  26648078 gattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaa 26648029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 26657582 - 26657525
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||| | |||||    
T  26657582 gattcttgtcggacgatttctttacccatgtcctctatcaaatcgtgtaatgccacat 26657525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 26754046 - 26753997
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  26754046 gattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaa 26753997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 26763553 - 26763496
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||| | |||||    
T  26763553 gattcttgtcggacgatttctttacccatgtcctctatcaaatcgtgtaatgccacat 26763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 26825345 - 26825276
Alignment:
Q  119 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtat 188  Q
    |||||||| ||||||| |||||||||  ||||||||||| |||||||||||| ||||||| | |||||||    
T  26825345 ctatgagagatttttctgccaacacttgaacatgatgttttatgcaatggccgtaatgagtacgaagtat 26825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 26825433 - 26825376
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||| ||||||||| |||||||| |||||||||| ||||||||||||||| |||||||    
T  26825433 gattgttgtcggactacttctttgcccatgtcctttatcaagtcatgtaatgtcacat 26825376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 26885690 - 26885633
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||||||| || |||| |||||||||||||||||||| |||||||||||| |||||||    
T  26885690 gattcttgccgaacgatttctttacccatgtcctctaccaagtcatgtaatgtcacat 26885633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 28141146 - 28141089
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||| |||||||    
T  28141146 gattcttgtcgaacaatttctttacccatctcctctatcaagtcatgtaatgtcacat 28141089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 26951351 - 26951295
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 96  Q
    ||||||||||||| || |||| ||||||| |||||||||||||||||||| ||||||    
T  26951351 gattcttgtcggatgatttctatacccatatcctctatcaagtcatgtaatgtcaca 26951295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 26979023 - 26978939
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||||||||||||||||||||||||    ||    |||||||||||||||| |||| ||||||| ||||||||||||| ||||||    
T  26979023 accacaacctactgcgttctccaggttctttaattgattcttgtcggacgatttctatacccatatcctctatcaagtaatgtaa 26978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 27591714 - 27591836
Alignment:
Q  156 ttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatcc 255  Q
    ||||||| |||  |||||||||||||||||||| |   | |||||   | || |||| ||||||| |||||||||||| || | |||||||||||| |||    
T  27591714 ttctatggaataaccataatgagcatgaagtatctgtttgactttctccaatctacatcctttgatgcaacaagcaatatccaaaaagacactctgctcc 27591813  T
Q  256 ttttccttcaaagcatcatagct 278  Q
    | ||| | |||||||||||||||    
T  27591814 tcttcttccaaagcatcatagct 27591836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 28244226 - 28244148
Alignment:
Q  214 cctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    ||||||||||| ||||||||||| ||||| ||| |||| || | || || |||||||||| ||||||||| ||||||||    
T  28244226 cctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatct 28244148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 29842741 - 29842819
Alignment:
Q  212 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 290  Q
    ||||||||||||||||||||||||| ||||| ||||  || || | ||||| |||||||||| |||||| || ||||||    
T  29842741 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtat 29842819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 292
Target Start/End: Complemental strand, 26825249 - 26825172
Alignment:
Q  215 ctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||||||||||||| || || ||||| || | || ||| | |||||||||||||||||||  ||||||||    
T  26825249 ctttgaagcaacaagcaatgtcgaggaaaacactttgttgctcttcttccaaagcatcatagcttactctaagtatct 26825172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 27676366 - 27676435
Alignment:
Q  209 tacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagct 278  Q
    |||| ||||||| |||||||||||| || | |||||||||||| |||| ||| | |||||||||||||||    
T  27676366 tacatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcgtccaaagcatcatagct 27676435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 28150783 - 28150734
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    ||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  28150783 gattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaa 28150734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 2186262 - 2186178
Alignment:
Q  209 tacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatctg 293  Q
    |||| ||||||||  ||||||||||||| ||||||| ||||| ||| |  |||| |||||||||| |||| |||| |||||||||    
T  2186262 tacatcctttgaaaaaacaagcaatgtcgagaaagagactcttatcttcctcctgcaaagcatcaaagctgactttaagtatctg 2186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 28097023 - 28097079
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 96  Q
    ||||||||||  || | ||||||||||||||| ||||||||||||||||| ||||||    
T  28097023 gattcttgtcttacaatttctttacccatgtcttctatcaagtcatgtaatgtcaca 28097079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 26813157 - 26813102
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    ||||||||| |||| | |||||||||| ||| |||||||||||||||||| |||||    
T  26813157 gattcttgttggacaatttctttacccgtgtgctctatcaagtcatgtaatgtcac 26813102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 28097186 - 28097229
Alignment:
Q  206 atttacaccctttgaagcaacaagcaatgtctagaaagacactc 249  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  28097186 atttataccctttgaagcaacaagcaatgtcgagaaaaacactc 28097229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 26938668 - 26938582
Alignment:
Q  3 aaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    ||||||||| ||| |||||||||||| |   |||   ||||||||||  || | |||||||||||||||||| ||||||||||||||    
T  26938668 aaaccacaatctagtgcgttctccagcctctttgactgattcttgtctaacaatttctttacccatgtcctcaatcaagtcatgtaa 26938582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 27663965 - 27664043
Alignment:
Q  214 cctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||||||||||| || | |||||||||||| |  | ||| | ||||| |||| ||||||||| ||||||||    
T  27663965 cctttgaagcaacaagcaatatccaaaaagacactctgttgttcttcttccaaagtatcaaagcttactttaagtatct 27664043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 28326906 - 28326832
Alignment:
Q  217 ttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||| ||||||||||| ||||| ||| |||| || | ||| | |||||||||| ||||||||| |||||||    
T  28326906 ttgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaagcatcaaagcttactttaagtatc 28326832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 28504542 - 28504468
Alignment:
Q  217 ttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 291  Q
    |||||||| ||||||||||| ||||| ||| |||| || | ||| | |||||||||| ||||||||| |||||||    
T  28504542 ttgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaagcatcaaagcttactttaagtatc 28504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 29827419 - 29827341
Alignment:
Q  212 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 290  Q
    ||||||||||||||||||||||||| ||||| ||||  || || | ||||| |||||||||| | |||| || ||||||    
T  29827419 accctttgaagcaacaagcaatgtcgagaaaaacaccttgttcatcttcctccaaagcatcaaaacttattttaagtat 29827341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 27663777 - 27663826
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaa 89  Q
    |||||||||||||| | |||| ||||||| | ||||||||||||||||||    
T  27663777 gattcttgtcggactatttctatacccatatactctatcaagtcatgtaa 27663826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 29695092 - 29695165
Alignment:
Q  169 ccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctagaaa 242  Q
    |||||||||||||||||||||||    ||| ||||| | || || ||||||| ||||||||||||||| |||||    
T  29695092 ccataatgagcatgaagtatttcttctactcttgtcaaattccatcctttgaggcaacaagcaatgtcaagaaa 29695165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 28187047 - 28186955
Alignment:
Q  4 aaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 96  Q
    |||||||||||||| |||  |||||||   || ||||| ||||  ||||| | |||||||||||| | |||||||||| ||||||| ||||||    
T  28187047 aaccacaacctactacgtcttccaggctcttttggagactctttccggacaatttctttacccattttctctatcaaggcatgtaacgtcaca 28186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 29842563 - 29842611
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 88  Q
    |||||| |||| || | ||||||||||||||| ||||||||||||||||    
T  29842563 gattctggtcgtacaatttctttacccatgtcttctatcaagtcatgta 29842611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 290
Target Start/End: Complemental strand, 61174 - 60924
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 139  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| | || |||||  ||||| | ||||||||||||||| | |    
T  61174 gattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgtattcaaaatggtcaatgagacatttttcaacta 61075  T
Q  140 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctag 239  Q
     |||| |||||||||| | ||||||||| |||||||||||||||||||||||  | || |||  ||||||||| ||||||||||||||||||||||||||    
T  61074 gcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctag 60975  T
Q  240 aaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 290  Q
    ||||||||| || |||| ||||| ||||| ||||||||| |||| ||||||    
T  60974 aaagacactttgctcctcttcctccaaagaatcatagctcactttaagtat 60924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 40 - 290
Target Start/End: Complemental strand, 18075366 - 18075116
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagacatttttcagcca 139  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| | || |||||  ||||| | ||||||||||||||| | |    
T  18075366 gattctagtcggacgagttctttacccatgttctctatcaagttatgtaatgacacatgactatcgtattcaaaatggtcaatgagacatttttcaacta 18075267  T
Q  140 acactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctag 239  Q
     |||| |||||||||| | ||||||||| |||||||||||||||||||||||  | || |||  ||||||||| ||||||||||||||||||||||||||    
T  18075266 gcacttcaacatgatgatttatgcaatgaccataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctag 18075167  T
Q  240 aaagacactctgatccttttccttcaaagcatcatagcttacttgaagtat 290  Q
    ||||||||| || |||| ||||| ||||| ||||||||| |||| ||||||    
T  18075166 aaagacactttgctcctcttcctccaaagaatcatagctcactttaagtat 18075116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 18730068 - 18730131
Alignment:
Q  34 ttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    ||||| |||||||  ||||||| ||||||||||||| |||||| |||||||||||| |||||||    
T  18730068 ttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaatgtcacat 18730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 18678101 - 18678191
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    ||||||||||||| || | | |||||   ||||| |||||||  ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  18678101 accacaacctactacgcttttcaggctctttgggtgattctttccggacgatttctttacccatgacctctagcaagtcatgtaatgtcac 18678191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 18697973 - 18698034
Alignment:
Q  34 ttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    ||||| |||||||  ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  18697973 ttgggtgattctttccggacgatttctttacccatggcctctagcaagtcatgtaatgtcac 18698034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 18654056 - 18654111
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcac 95  Q
    |||||||  ||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  18654056 gattctttccggacgatttctttacccatgacctctagcaagtcatgtaatgtcac 18654111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 292
Target Start/End: Original strand, 2113 - 2368
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattccc--aatggc-ctatgagacatttttcag 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |  |||||||||||  |||  |  ||||||| ||||||||     
T  2113 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttctttatgagagatttttcaa 2212  T
Q  137 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtc 236  Q
    |||||||||| | |||||||  |||||||||||||||||||| || |||||| |   |  | | |  ||||||||| | |||||||||||||||||||||    
T  2213 ccaacactcctagatgatgtgttatgcaatggccataatgagaattaagtatatatttggcatcttcccatttacatcttttgaagcaacaagcaatgtc 2312  T
Q  237 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||| || | || ||||| |||||||||||| ||||||| ||||||||    
T  2313 tagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatct 2368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 292
Target Start/End: Original strand, 266888 - 267169
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtc 104  Q
    |||| |||||||| ||||||||||||   || || |||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||||| | |     
T  266888 accataacctacttcgttctccaggctctttaggtgattcttggcggaccacttctttacccatgtcctctatcatgtcatgtaatgtcacatgactata 266987  T
Q  105 atattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtc 204  Q
    ||||      ||| |||||||| ||||||||||||||||||| | |||||||  |||||| ||||||||||||| ||||||||| |   |  | | |  |    
T  266988 atat------tggtctatgagagatttttcagccaacactcctagatgatgtgttatgcagtggccataatgagaatgaagtatatgtttggcatcttcc 267081  T
Q  205 catttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||| | | ||||||||||||||||||||||||| |||||||||||| |||| ||| | |||| |||||||||| |||| ||||||||    
T  267082 cattcatatcctttgaagcaacaagcaatgtctaaaaagacactctgctcctcttcttccaaaccatcatagctcactttaagtatct 267169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 280
Target Start/End: Original strand, 28126333 - 28126492
Alignment:
Q  121 atgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttga 220  Q
    |||||| |||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| |    ||| | |||| || || |||||||||    
T  28126333 atgagagatttttcaaccaacactccaacatgatgctttatgcaatggccataatgagcatgaagtatcttttcaacctctgtcaatctataccctttga 28126432  T
Q  221 agcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagctta 280  Q
    |||| ||||| || || ||||||||||| || || | ||||| |||||||||||||||||    
T  28126433 agcagcaagctatatcgagaaagacactttgctcatcttcctccaaagcatcatagctta 28126492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 28132157 - 28132330
Alignment:
Q  119 ctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacacccttt 218  Q
    |||||||| |||||||  ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||    ||  ||||| || || |||| ||    
T  28132157 ctatgagagatttttcgaccaacactccaacatgatgttttatgcaatggccattatgagcatgaagtatctcttcgaccattgtcaatctatacccctt 28132256  T
Q  219 gaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||||||||| || || ||||||||||| || |||| ||||| ||||||||| || ||||||| || |||||    
T  28132257 gaagcaacaagctatatccagaaagacactttgctcctcttcctccaaagcatcgtaacttactttaaatatct 28132330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 282
Target Start/End: Complemental strand, 26137528 - 26137251
Alignment:
Q  2 gaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagt 101  Q
    ||||||||||||||||||||| ||||||    ||||| |||||||||||||| | |||||||||||| |||||||||||||||||||| | ||||  |      
T  26137528 gaaaccacaacctactgcgttttccaggttctttgggtgattcttgtcggacaatttctttacccatatcctctatcaagtcatgtaatgccacaaaacc 26137429  T
Q  102 gtcatattcccaatggcctatgagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaactttt 201  Q
     | | | |   |||   | ||||||  ||| ||| |||||||||||||||||  || |||||||||| ||||| ||||||||||||| |     |||| |    
T  26137428 ataaaaat--taatcttc-atgagagctttatcaaccaacactccaacatgactttttatgcaatggtcataacgagcatgaagtatcttttggacttct 26137332  T
Q  202 gtccatttacaccctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttact 282  Q
    ||| |||||||||||||||||||||||||||| || | ||| ||||| || |  | ||| | |||||||||||||||||||    
T  26137331 gtcaatttacaccctttgaagcaacaagcaatatccaaaaatacactttgttgttcttcgtccaaagcatcatagcttact 26137251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 28126258 - 28126315
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||||||  ||||||| |||||||||| | |||||||||||||||||||| |||||||    
T  28126258 gattctttccggacgatttctttacccgtatcctctatcaagtcatgtaatgtcacat 28126315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 293
Target Start/End: Original strand, 29272412 - 29272668
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaat---ggcctatgagacatttttcag 136  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||  | |||| |  | ||||||||||||   || |||||||| |||||||||    
T  29272412 gattcttgtcggacgacttctttacccatgtcccctatcaaatcatgcaacattacataatggccatattcccaatattggtctatgagagatttttcag 29272511  T
Q  137 ccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtc 236  Q
    |||| ||||| | |||||||  |||||||||||||||||||| ||||||||| |   |  | | |  ||||| ||| |||||||||||||||||||||||    
T  29272512 ccaatactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattcacaacctttgaagcaacaagcaatgtc 29272611  T
Q  237 tagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatctg 293  Q
     ||||||||||| || | || ||| | |||||||||||| ||||||| |||||||||    
T  29272612 cagaaagacactttgttgctcttcttccaaagcatcataacttactttaagtatctg 29272668  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 16371671 - 16371764
Alignment:
Q  3 aaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcaca 96  Q
    |||||| |||||||| ||||| || |||   || || |||||||||||||| | ||||||||||||||| |||| || || |||||| ||||||    
T  16371671 aaaccataacctactacgttcgcctggctcctttggtgattcttgtcggacaatttctttacccatgtcttctaccaggttatgtaatgtcaca 16371764  T

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Target: scaffold1870 (Bit Score: 67; Significance: 9e-30; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 291 - 122
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||| ||  | ||||  | |||||  ||| ||||||||    
T  291 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactcct-tccatccacatcctttgaa 193  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||| |||||||||||||| ||||| || | || ||||| |||||||||||||||||||| ||||||||    
T  192 gcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatct 122  T

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Target: scaffold1870; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 389 - 330
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatga 99  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  389 gattcttgtcgtacgacttctttacccatgtcctctataaagtcatgtaatgtcacatga 330  T

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Target: scaffold0419 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 292
Target Start/End: Complemental strand, 9009 - 8840
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||| ||  | ||||  | |||||  ||| ||||||||    
T  9009 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactcct-tccatccacatcctttgaa 8911  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||| |||||||||||||| ||||| || | || ||||| |||||||||||| ||||||| ||||||||    
T  8910 gcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcataacttactttaagtatct 8840  T

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Target: scaffold0419; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 9107 - 9048
Alignment:
Q  40 gattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatga 99  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  9107 gattcttgtcgtacgacttctttacccatgtcctctataaagtcatgtaatgtcacatga 9048  T

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Target: scaffold0277 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 292
Target Start/End: Original strand, 12335 - 12504
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||||||||||||||| | | |||||||  ||||| |||||||||||||||| ||||||| |   | ||||  | |||||  ||| ||||||||    
T  12335 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactcct-tccatccacatcctttgaa 12433  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    |||||| |||||||||||||| ||||| || | || ||||| |||||||||||||||||||| ||||||||    
T  12434 gcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatct 12504  T

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Target: scaffold0277; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 123 - 293
Target Start/End: Original strand, 3372 - 3542
Alignment:
Q  123 gagacatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttcc-ctaacttttgtccatttacaccctttgaa 221  Q
    |||| ||||||||||||||||| | | |||||||  ||||| |||||||||||||||| ||||||| |   | ||||  |  ||||  ||| ||||||||    
T  3372 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactcctc-ccatccacatcctttgaa 3470  T
Q  222 gcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatctg 293  Q
    |||||| |||||||||||||| ||||| || | || ||||| |||||||||||||||||||| |||||||||    
T  3471 gcaacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctg 3542  T

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Target: scaffold0277; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 3258 - 3325
Alignment:
Q  21 ttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 88  Q
    ||||||||||   ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3258 ttctccaggctctttgggcgattcttgtcggacgacttctttacccatgtcctttatcaagtcatgta 3325  T

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Target: scaffold0277; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 12221 - 12288
Alignment:
Q  21 ttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 88  Q
    ||||||||||   ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12221 ttctccaggctctttgggcgattcttgtcggacgacttctttacccatgtcctttatcaagtcatgta 12288  T

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Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 17991739 - 17991822
Alignment:
Q  5 accacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgta 88  Q
    ||||||| ||||| ||||||||||||   || || |||||||| || |||| ||||||||||||||||||||||||||||||||    
T  17991739 accacaatctactccgttctccaggctctttaggtgattcttgccgaacgatttctttacccatgtcctctatcaagtcatgta 17991822  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 292
Target Start/End: Complemental strand, 3281092 - 3281012
Alignment:
Q  212 accctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    ||||||| ||||||||||||||||| ||||| ||||| || || | ||||| |||||||||| | || |||| ||||||||    
T  3281092 accctttaaagcaacaagcaatgtcgagaaaaacactttgctcgtcttcctccaaagcatcaaaactcactttaagtatct 3281012  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 615272 - 615199
Alignment:
Q  169 ccataatgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctagaaa 242  Q
    |||||||||||||||||||||||   |||  ||||| |||| || ||||||||||||||||||||||| |||||    
T  615272 ccataatgagcatgaagtatttcttcaacccttgtcaatttccatcctttgaagcaacaagcaatgtcaagaaa 615199  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 13717671 - 13717603
Alignment:
Q  174 atgagcatgaagtatttccctaacttttgtccatttacaccctttgaagcaacaagcaatgtctagaaa 242  Q
    ||||||||||||||||||  | || |||||| ||||| | ||||||||||||||||||||||| |||||    
T  13717671 atgagcatgaagtatttctttgacctttgtcgatttatatcctttgaagcaacaagcaatgtcaagaaa 13717603  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 16692507 - 16692412
Alignment:
Q  2 gaaaccacaacctactgcgttctccaggcctgttgggagattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacat 97  Q
    |||||||||||||||||||||  |||||    || || ||||||| |||||| | |||||||||||||||||| ||||||| ||| || |||||||    
T  16692507 gaaaccacaacctactgcgtttaccaggatgttttggggattcttttcggacaatttctttacccatgtcctcaatcaagtgatgcaatgtcacat 16692412  T

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Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 44388 - 44310
Alignment:
Q  214 cctttgaagcaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatct 292  Q
    ||||||||||| ||||||||||| ||||| ||| |||| || | || || |||||||||| ||||||||| ||||||||    
T  44388 cctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatct 44310  T

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