View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9847_high_9 (Length: 328)
Name: NF9847_high_9
Description: NF9847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9847_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 11 - 312
Target Start/End: Original strand, 42716082 - 42716383
Alignment:
| Q |
11 |
caaaggttttggaatgaatgttgttgaaatctcgtgcagtcttgatattagtggatggttggatcaatataagacgatacatattttaaactgagcctaa |
110 |
Q |
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| T |
42716082 |
caaaggttttggaatgaatgttgttgaaatctcgtgcagtcttgatattagtggatggttggatcaatataagacgatacatattttaaactgagcctaa |
42716181 |
T |
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| Q |
111 |
attatgtaccgtccaatcttgatccaatagctattgatatcatgactacatgattgcactgaactctgaccgcaaacaatccaaatccgaaatcaaaact |
210 |
Q |
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| T |
42716182 |
attatgtaccgtccaatcttgatccaatagctattgatatcatgactacatgattgcactgaactctgaccgcaaacaatccaaatccgaaatcaaaact |
42716281 |
T |
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| Q |
211 |
aggtagaattcatcaagcttgaaacaaaataacaagatcattacttggtgtggttaatgtaattaaaaatgtaactgccatctataaagttaacatatga |
310 |
Q |
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| T |
42716282 |
aggtagaattcatcaagcttgaaacaaaataacaaaatcattacttggtgtggttaatgtaattaaaaatgtaactgccatctataaagttaacatatga |
42716381 |
T |
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| Q |
311 |
ag |
312 |
Q |
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|| |
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| T |
42716382 |
ag |
42716383 |
T |
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