View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9848_low_14 (Length: 288)

Name: NF9848_low_14
Description: NF9848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9848_low_14
NF9848_low_14
[»] chr4 (17 HSPs)
chr4 (5-288)||(26315651-26315944)
chr4 (107-184)||(46676480-46676557)
chr4 (140-184)||(56497623-56497667)
chr4 (128-166)||(42756109-42756147)
chr4 (115-164)||(2649723-2649772)
chr4 (136-184)||(19731140-19731189)
chr4 (107-184)||(20799376-20799453)
chr4 (107-184)||(38453267-38453344)
chr4 (115-184)||(49473647-49473716)
chr4 (140-184)||(7230282-7230326)
chr4 (140-184)||(24785477-24785521)
chr4 (140-184)||(24822745-24822789)
chr4 (116-180)||(26008040-26008104)
chr4 (108-164)||(28435231-28435287)
chr4 (107-163)||(34833988-34834044)
chr4 (140-184)||(42845027-42845071)
chr4 (128-184)||(55924790-55924846)
[»] chr8 (20 HSPs)
chr8 (107-184)||(19778067-19778144)
chr8 (125-162)||(11104788-11104825)
chr8 (107-183)||(9635035-9635111)
chr8 (125-185)||(40167323-40167383)
chr8 (140-183)||(444416-444459)
chr8 (107-162)||(44975202-44975257)
chr8 (115-181)||(1244695-1244761)
chr8 (136-166)||(5179813-5179843)
chr8 (106-184)||(29499773-29499851)
chr8 (126-164)||(33620920-33620958)
chr8 (148-185)||(29774372-29774409)
chr8 (115-184)||(33445572-33445641)
chr8 (136-180)||(12714381-12714425)
chr8 (140-184)||(15438455-15438499)
chr8 (140-184)||(15529759-15529803)
chr8 (140-184)||(17704015-17704059)
chr8 (140-184)||(19488302-19488346)
chr8 (114-162)||(20469300-20469348)
chr8 (140-184)||(30623295-30623339)
chr8 (104-164)||(31832069-31832129)
[»] chr6 (7 HSPs)
chr6 (115-180)||(9923246-9923311)
chr6 (125-184)||(18254101-18254160)
chr6 (142-184)||(7083009-7083051)
chr6 (142-184)||(26522474-26522516)
chr6 (136-184)||(788868-788916)
chr6 (136-184)||(8629707-8629755)
chr6 (140-184)||(9333733-9333777)
[»] chr2 (15 HSPs)
chr2 (107-184)||(24548013-24548090)
chr2 (107-184)||(24593378-24593455)
chr2 (140-184)||(7413204-7413248)
chr2 (128-184)||(10156019-10156075)
chr2 (136-184)||(20120732-20120780)
chr2 (137-181)||(30045458-30045502)
chr2 (137-181)||(30050621-30050665)
chr2 (137-181)||(30141665-30141709)
chr2 (138-184)||(11560500-11560546)
chr2 (126-183)||(12124687-12124744)
chr2 (139-184)||(18231487-18231532)
chr2 (107-184)||(29544629-29544706)
chr2 (140-184)||(19179065-19179109)
chr2 (140-184)||(20455893-20455937)
chr2 (140-184)||(40099398-40099442)
[»] chr7 (11 HSPs)
chr7 (108-184)||(20103437-20103513)
chr7 (108-184)||(46987088-46987164)
chr7 (107-166)||(6384871-6384930)
chr7 (102-183)||(18714451-18714532)
chr7 (126-163)||(8879748-8879785)
chr7 (127-184)||(24991783-24991840)
chr7 (140-184)||(5352331-5352375)
chr7 (140-184)||(8615025-8615069)
chr7 (140-184)||(21050237-21050281)
chr7 (116-164)||(27263363-27263411)
chr7 (115-183)||(32896454-32896522)
[»] chr1 (13 HSPs)
chr1 (108-184)||(35473954-35474030)
chr1 (115-184)||(17283953-17284022)
chr1 (107-184)||(19262889-19262966)
chr1 (107-184)||(21638115-21638192)
chr1 (115-164)||(45190259-45190308)
chr1 (114-184)||(38448855-38448925)
chr1 (107-184)||(5907801-5907878)
chr1 (107-184)||(47528429-47528506)
chr1 (126-162)||(11913754-11913790)
chr1 (116-184)||(17396710-17396778)
chr1 (138-182)||(20372922-20372966)
chr1 (140-184)||(27127226-27127270)
chr1 (104-184)||(47719086-47719166)
[»] scaffold0238 (1 HSPs)
scaffold0238 (105-184)||(25391-25470)
[»] chr3 (17 HSPs)
chr3 (125-184)||(52119378-52119437)
chr3 (107-184)||(29631188-29631265)
chr3 (105-182)||(35191797-35191874)
chr3 (107-163)||(17507681-17507737)
chr3 (107-166)||(4216382-4216440)
chr3 (136-183)||(10926472-10926519)
chr3 (107-166)||(37376572-37376631)
chr3 (105-164)||(41817521-41817580)
chr3 (137-184)||(47377361-47377408)
chr3 (138-184)||(16980367-16980413)
chr3 (114-184)||(53207972-53208042)
chr3 (115-184)||(1149059-1149128)
chr3 (107-184)||(25505684-25505760)
chr3 (105-162)||(38573553-38573610)
chr3 (142-182)||(13992675-13992715)
chr3 (147-183)||(33224690-33224726)
chr3 (140-184)||(46469279-46469323)
[»] chr5 (8 HSPs)
chr5 (115-184)||(2053028-2053097)
chr5 (115-166)||(22901979-22902030)
chr5 (137-184)||(26400224-26400271)
chr5 (107-184)||(6624778-6624855)
chr5 (139-184)||(36321508-36321553)
chr5 (115-184)||(37932332-37932401)
chr5 (140-184)||(16133080-16133124)
chr5 (140-184)||(39914903-39914947)
[»] scaffold0025 (1 HSPs)
scaffold0025 (125-184)||(64220-64279)
[»] scaffold1619 (1 HSPs)
scaffold1619 (115-163)||(1054-1102)
[»] scaffold1379 (1 HSPs)
scaffold1379 (136-184)||(1638-1686)
[»] scaffold0198 (1 HSPs)
scaffold0198 (118-162)||(19263-19307)
[»] scaffold0069 (1 HSPs)
scaffold0069 (138-182)||(52084-52128)
[»] scaffold0044 (1 HSPs)
scaffold0044 (140-184)||(42349-42393)


Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 288
Target Start/End: Complemental strand, 26315944 - 26315651
Alignment:
Q  5 ggatatgctagcatgttatattaagatctgtacgattgtattttatatgtgtggggttcagtatatgttttccctcatccctaaggtcgattgttttacc 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26315944 ggatatgctagcatgttatattaagatctttacgattgtattttatatgtgtggggttcagtatatgttttccctcatccctaaggtcgattgttttacc 26315845  T
Q  105 tcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctcgaggactgcta--------- 195  Q
    |||||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||             
T  26315844 tcttttttaggtggtgtctagggttcgaacatcgaaccttgtatatattatgcattatccttttaaattgaactaagctcgagaactgctacttgctacc 26315745  T
Q  196 -cttgtgtaatgacttaggaacttaggtaagaaattattaactcattatatagtaaatttttgatgagatattttggttgagatactatgtaag 288  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  26315744 tcttgtgtaatgacttaggaacttaggtaagaaattattaactcatcatatagtaaatttgtgatgagatattttggttgagatactatgtaag 26315651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 46676480 - 46676557
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||| ||| |||||  ||| |||||| |||||||||||||||||||| | || ||||||||||||    
T  46676480 tttttttggtggtgtctgggggtcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctc 46676557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 56497623 - 56497667
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  56497623 accttgcatatattatgcattgtccttaccaattgagctaagctc 56497667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 42756109 - 42756147
Alignment:
Q  128 ttcgaataccgaaccttgtatatattatgcattgtcctt 166  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  42756109 ttcgaatcccgaaccttgcatatattatgcattgtcctt 42756147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 2649723 - 2649772
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    |||||| ||||||||||||  ||| |||||| ||||||||||||||||||    
T  2649723 gtggtggctagggttcgaactccggaccttgcatatattatgcattgtcc 2649772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 19731140 - 19731189
Alignment:
Q  136 ccgaaccttgtatatatta-tgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| |||||||| |||||||||||| | |||||||||||||||    
T  19731140 ccgaaccttgcatatattaatgcattgtccttaccaattgagctaagctc 19731189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 20799376 - 20799453
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||| | |||||| |||  ||| |||||| |||||||||||||||||| | | || ||||||||||||    
T  20799376 tttttttggtggtgaccagggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctc 20799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 38453344 - 38453267
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||| || |||||||||  | | |||||| |||||||||||||||||| | | || ||||||||||||    
T  38453344 tttttttggtggtggctggggttcgaaccctggaccttgcatatattatgcattgtccatgccaactgagctaagctc 38453267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 49473716 - 49473647
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| || |||||||||  ||| |||||| |||||||||||||||||||| | || || |||||||||    
T  49473716 gtggtgactggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgggctaagctc 49473647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 7230326 - 7230282
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  7230326 accttgcatatattatgcattgtccttaccaactgagctaagctc 7230282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 24785477 - 24785521
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||||||||||||| | || |||||| |||||    
T  24785477 accttgtatatattatgcattgtccttaccaactgagcttagctc 24785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 24822789 - 24822745
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||||||||||||| | || |||||| |||||    
T  24822789 accttgtatatattatgcattgtccttaccaactgagcttagctc 24822745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 26008040 - 26008104
Alignment:
Q  116 tggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaa 180  Q
    |||||||||||| ||||| | || |||||| ||||||||||||||||| || | |||||| ||||    
T  26008040 tggtgtctagggatcgaacaacggaccttgcatatattatgcattgtctttaccaattgaactaa 26008104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 28435231 - 28435287
Alignment:
Q  108 tttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    ||||| ||||||| || ||||| |||  |||||||||| ||||||||||||||||||    
T  28435231 ttttttggtggtggctggggtttgaaccccgaaccttgcatatattatgcattgtcc 28435287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 34833988 - 34834044
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtc 163  Q
    |||||| ||||||||| || |||||||  ||| |||||| |||||||||||||||||    
T  34833988 tttttttggtggtgtccagtgttcgaaccccggaccttgcatatattatgcattgtc 34834044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 42845071 - 42845027
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||||| || |||| |||||||    
T  42845071 accttgcatatattatgcattgtcctttccaactgagttaagctc 42845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 55924790 - 55924846
Alignment:
Q  128 ttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||| | ||| |||| |||||||||| ||||||||| | |||||||||||||||    
T  55924790 ttcgaatcctgaaacttgcatatattatgtattgtccttaccaattgagctaagctc 55924846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 19778144 - 19778067
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||||||||| ||||||  ||| |||||| |||||||||||||||||||| | || ||||||||||||    
T  19778144 tttttttggtggtgtctaggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctc 19778067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 11104825 - 11104788
Alignment:
Q  125 gggttcgaataccgaaccttgtatatattatgcattgt 162  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11104825 gggttcgaatcccgaaccttgtatatattatgcattgt 11104788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 9635035 - 9635111
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagct 183  Q
    |||||| |||||| | | |||||||||  |||||||||| || ||||||||||| ||||| |||| |||||||||||    
T  9635035 tttttttggtggtattttgggttcgaaccccgaaccttgcatgtattatgcattatccttacaaactgagctaagct 9635111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 40167383 - 40167323
Alignment:
Q  125 gggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctcg 185  Q
    ||||| |||| ||||||||||||||||||||||||||||| | | || |||| ||||||||    
T  40167383 gggtttgaatcccgaaccttgtatatattatgcattgtccataccaactgagttaagctcg 40167323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 444459 - 444416
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagct 183  Q
    |||||| |||||||||||||||||||| | ||||||||||||||    
T  444459 accttgcatatattatgcattgtccttaccaattgagctaagct 444416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 44975257 - 44975202
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgt 162  Q
    |||||| |||||||||  || ||||||| |||||||||| ||||||||||||||||    
T  44975257 tttttttggtggtgtccgggtttcgaatcccgaaccttgcatatattatgcattgt 44975202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 1244695 - 1244761
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaag 181  Q
    ||||||||  |||||||||  ||  ||||||||||||||||||||||||||| | || |||||||||    
T  1244695 gtggtgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagctaag 1244761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 5179843 - 5179813
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctt 166  Q
    |||||||||||||||||||||||||||||||    
T  5179843 ccgaaccttgtatatattatgcattgtcctt 5179813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 29499851 - 29499773
Alignment:
Q  106 cttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||| |||||||| | |||||||||  | | |||||| |||| ||||||||||||| | | |||||||||||||||    
T  29499851 ctttttttggtggtgtttggggttcgaaccctggaccttgcatattttatgcattgtccataccaattgagctaagctc 29499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 33620958 - 33620920
Alignment:
Q  126 ggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  33620958 ggttcgaactccgaaccttgtatatattatgcattgtcc 33620920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 29774409 - 29774372
Alignment:
Q  148 tatattatgcattgtcctttcaaattgagctaagctcg 185  Q
    |||||||||||||||||||||  |||||||||||||||    
T  29774409 tatattatgcattgtcctttcttattgagctaagctcg 29774372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 33445641 - 33445572
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||  |||||||||  | |||||||||||||||||||||||| | | | || ||||||||||||    
T  33445641 gtggtgtctgaggttcgaatctcaaaccttgtatatattatgcattgttcctaccaactgagctaagctc 33445572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 12714381 - 12714425
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctttcaaattgagctaa 180  Q
    |||||||||| |||||||||||||||||| ||| || ||||||||    
T  12714381 ccgaaccttgcatatattatgcattgtcccttccaactgagctaa 12714425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 15438499 - 15438455
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  15438499 accttgcatatattatgcattgtccttaccaagtgagctaagctc 15438455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 15529803 - 15529759
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  15529803 accttgcatatattatgcattgtccttaccaagtgagctaagctc 15529759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 17704059 - 17704015
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  17704059 accttgcatatattatgcattgtccttaccaactgagctaagctc 17704015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 19488346 - 19488302
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||||||||||||| | || ||||||| ||||    
T  19488346 accttgtatatattatgcattgtccttaccaactgagctatgctc 19488302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 20469300 - 20469348
Alignment:
Q  114 ggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgt 162  Q
    ||||||| || |||||||||  |||||||||| ||||||||||||||||    
T  20469300 ggtggtggctggggttcgaactccgaaccttgcatatattatgcattgt 20469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 30623339 - 30623295
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  30623339 accttgcatatattatgcattgtccttaccaactgagctaagctc 30623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 31832069 - 31832129
Alignment:
Q  104 ctcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    ||||||||| |||||||||  |||||||||  ||| || ||| ||||||||||||||||||    
T  31832069 ctctttttttggtggtgtccggggttcgaaacccggacattgcatatattatgcattgtcc 31832129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 9923311 - 9923246
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaa 180  Q
    |||||||| | |||| |||| |||||||||||||||||||||||||||||||   |||||||||||    
T  9923311 gtggtgtccaaggtttgaatcccgaaccttgtatatattatgcattgtccttatcaattgagctaa 9923246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 18254101 - 18254160
Alignment:
Q  125 gggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| ||| |||||| || ||||||||||||||||| | || ||||||||||||    
T  18254101 gggttcgaatcccggaccttgcatgtattatgcattgtccttaccaactgagctaagctc 18254160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 7083009 - 7083051
Alignment:
Q  142 cttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||| |||||||||||||||||||| | |||||||||||||||    
T  7083009 cttgcatatattatgcattgtccttaccaattgagctaagctc 7083051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 26522516 - 26522474
Alignment:
Q  142 cttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||||||||||| | || ||||||||||||    
T  26522516 cttgtatatattatgcattgtccttaccaactgagctaagctc 26522474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 788916 - 788868
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| |||||||||||||||||||| | || |||| |||||||    
T  788916 ccgaaccttgcatatattatgcattgtccttaccaactgagataagctc 788868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 8629707 - 8629755
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| |||||||||||||||||| | | ||||||| |||||||    
T  8629707 ccgaaccttgcatatattatgcattgtccataccaattgagttaagctc 8629755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 9333777 - 9333733
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||| ||||||||||||| | |||||||||||||||    
T  9333777 accttgcatatataatgcattgtccttaccaattgagctaagctc 9333733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 24548090 - 24548013
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||||| ||||||||||  ||| |||||| |||||||||| ||||||||| | || ||||||||||||    
T  24548090 tttttttggtggtgtccagggttcgaaccccggaccttgaatatattatggattgtccttaccaactgagctaagctc 24548013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 24593455 - 24593378
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||||  ||||||||||  ||| |||||| |||||||||||||||||||| | || ||||||||||||    
T  24593455 tttttttggtggtgttcagggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctc 24593378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 7413204 - 7413248
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||||||||||||| | || ||||||||||||    
T  7413204 accttgtatatattatgcattgtccttaccaactgagctaagctc 7413248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 10156075 - 10156019
Alignment:
Q  128 ttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||||||| |||||||||| ||||||||| | || ||||||||||||    
T  10156075 ttcgaacaccgaaccttgcatatattatgtattgtccttaccaactgagctaagctc 10156019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 20120732 - 20120780
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  20120732 ccgaaccttgcatatattatgcattgtccttaccaactgagctaagctc 20120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 30045502 - 30045458
Alignment:
Q  137 cgaaccttgtatatattatgcattgtcctttcaaattgagctaag 181  Q
    |||||||||||||||||||||||||||| | | ||||||||||||    
T  30045502 cgaaccttgtatatattatgcattgtccctaccaattgagctaag 30045458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 30050665 - 30050621
Alignment:
Q  137 cgaaccttgtatatattatgcattgtcctttcaaattgagctaag 181  Q
    |||||||||||||||||||||||||||| | | ||||||||||||    
T  30050665 cgaaccttgtatatattatgcattgtccctaccaattgagctaag 30050621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 30141709 - 30141665
Alignment:
Q  137 cgaaccttgtatatattatgcattgtcctttcaaattgagctaag 181  Q
    |||||||||||||||||||||||||||| | | ||||||||||||    
T  30141709 cgaaccttgtatatattatgcattgtccctaccaattgagctaag 30141665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 11560546 - 11560500
Alignment:
Q  138 gaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| |||||||||||||||||| | | |||||||||||||||    
T  11560546 gaaccttgcatatattatgcattgtccctaccaattgagctaagctc 11560500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 12124744 - 12124687
Alignment:
Q  126 ggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagct 183  Q
    ||||||||  ||| |||||| |||||||||||||||||||| | || |||||||||||    
T  12124744 ggttcgaactccggaccttgcatatattatgcattgtccttaccaactgagctaagct 12124687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 18231487 - 18231532
Alignment:
Q  139 aaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||| |||||||||||||||||||| | || ||||||||||||    
T  18231487 aaccttgcatatattatgcattgtccttaccaactgagctaagctc 18231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 29544706 - 29544629
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||| |  ||||| |||  ||| |||||| |||||||||||||||||| | | |||||||||||||||    
T  29544706 tttttttggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccctaccaattgagctaagctc 29544629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 19179065 - 19179109
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  19179065 accttgcatatattatgcattgtccttaccaactgagctaagctc 19179109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 20455937 - 20455893
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||| | | |||||||||||||||    
T  20455937 accttgcatatattatgcattgtccataccaattgagctaagctc 20455893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 40099398 - 40099442
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  40099398 accttgcatatattatgcattgtccttaccaactgagctaagctc 40099442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 20103437 - 20103513
Alignment:
Q  108 tttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||| |||||||||| |||||||||  ||| |||||||| |||||||||||||||||| | || |||| |||||||    
T  20103437 ttttttggtggtgtctggggttcgaaccccggaccttgtaaatattatgcattgtccttaccaactgagttaagctc 20103513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 46987164 - 46987088
Alignment:
Q  108 tttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||| |||||||||  |||||||||  ||| |||||| |||||||||||||||||||| | || ||||||||||||    
T  46987164 tttttgggtggtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctc 46987088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 6384930 - 6384871
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctt 166  Q
    |||||| ||||||||||||||||||||  ||  |||||| ||||||||||||||||||||    
T  6384930 tttttttggtggtgtctagggttcgaaccccagaccttgcatatattatgcattgtcctt 6384871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 18714532 - 18714451
Alignment:
Q  102 acctcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagct 183  Q
    ||||||||||| ||||||||   ||||| |||  ||| |||||| |||||||||||||||||||| | || |||||||||||    
T  18714532 acctctttttttggtggtgtacggggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagct 18714451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 8879748 - 8879785
Alignment:
Q  126 ggttcgaataccgaaccttgtatatattatgcattgtc 163  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  8879748 ggttcgaatcccgaaccttgcatatattatgcattgtc 8879785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 24991840 - 24991783
Alignment:
Q  127 gttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| ||| | |||| |||||||||||||||||||| | || ||||||||||||    
T  24991840 gttcgaatcccgtatcttgcatatattatgcattgtccttaccaactgagctaagctc 24991783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 5352375 - 5352331
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||| ||||||||| | || ||||||||||||    
T  5352375 accttgtatatattatgtattgtccttaccaactgagctaagctc 5352331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 8615069 - 8615025
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  8615069 accttgcatatattatgcattgtccttaccaactgagctaagctc 8615025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 21050237 - 21050281
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  21050237 accttgcatatattatgcattgtccttaccaactgagctaagctc 21050281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 27263411 - 27263363
Alignment:
Q  116 tggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    ||||| || |||||||||  |||||||||| ||||||||||||||||||    
T  27263411 tggtggctggggttcgaactccgaaccttgcatatattatgcattgtcc 27263363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 32896454 - 32896522
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagct 183  Q
    |||||||||  ||||||||  || || ||||||||||||||||||||||||| | || |||| ||||||    
T  32896454 gtggtgtctgaggttcgaaccccaaatcttgtatatattatgcattgtccttcccaactgagttaagct 32896522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 35474030 - 35473954
Alignment:
Q  108 tttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||| |||||||||  |||||||||  | |||||||| |||||||||||||| ||||| | |||||||||||||||    
T  35474030 ttttttggtggtgtccggggttcgaaccctgaaccttgcatatattatgcattatccttaccaattgagctaagctc 35473954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 17284022 - 17283953
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| ||||||||||  | | |||||| |||||||||||||||||||| | || ||||||||||||    
T  17284022 gtggtgtccagggttcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaagctc 17283953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 19262889 - 19262966
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||| |||||||||  |||||| ||| |||| |||||||||||||||   || ||||||||||||    
T  19262889 tttttttggtggtgtctggggttcgaaccccgaactttgcatatgttatgcattgtccttatcaactgagctaagctc 19262966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 21638192 - 21638115
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||  |||||||||  ||| |||||| |||||| ||||||||||| | | |||||||||||||||    
T  21638192 tttttttggtggtgtccggggttcgaaccccggaccttgcatatatcatgcattgtccgtaccaattgagctaagctc 21638115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 45190259 - 45190308
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    |||||| |||||||| |||| |||||||||| ||||||||||||||||||    
T  45190259 gtggtggctagggtttgaatcccgaaccttgcatatattatgcattgtcc 45190308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 38448855 - 38448925
Alignment:
Q  114 ggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||  || ||||||  ||| |||||| |||||||||||||||||||| | || ||||||||||||    
T  38448855 ggtggtgtccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctc 38448925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 5907878 - 5907801
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||  ||||| |||  | | |||||| |||||||||||||||||||| | || ||||||||||||    
T  5907878 tttttttggtggtgtccggggtttgaaccctggaccttgcatatattatgcattgtccttgccaactgagctaagctc 5907801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 47528429 - 47528506
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||  |||||||||   || ||||||  ||||||||||||||||||| | || ||||||||||||    
T  47528429 tttttttggtggtgtccggggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaagctc 47528506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 11913790 - 11913754
Alignment:
Q  126 ggttcgaataccgaaccttgtatatattatgcattgt 162  Q
    |||| |||| |||||||||||||||||||||||||||    
T  11913790 ggtttgaatcccgaaccttgtatatattatgcattgt 11913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 17396778 - 17396710
Alignment:
Q  116 tggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| ||||||||   || ||||||| ||||||||||||||||||||   || ||||||||||||    
T  17396778 tggtgtcttgggttcgagccccaaaccttgaatatattatgcattgtccttgtcaactgagctaagctc 17396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 20372922 - 20372966
Alignment:
Q  138 gaaccttgtatatattatgcattgtcctttcaaattgagctaagc 182  Q
    |||||||| ||||||||| |||||||||||| ||||||| |||||    
T  20372922 gaaccttgcatatattatacattgtcctttccaattgagttaagc 20372966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 27127270 - 27127226
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||||||||||||||| ||||| | || ||||||||||||    
T  27127270 accttgtatatattatgcattatccttactaactgagctaagctc 27127226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 47719086 - 47719166
Alignment:
Q  104 ctcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||| ||||||| |  || ||||||  |||||||||| |||||||||||||| ||||| | || |||| |||||||    
T  47719086 ctctttttttggtggtggccgggattcgaactccgaaccttgcatatattatgcattatccttaccaactgagttaagctc 47719166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 25470 - 25391
Alignment:
Q  105 tcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| |||||||||| |||||||||  | | |||||| |||||||||||||||||||| | || |||| |||||||    
T  25470 tctttttttggtggtgtctggggttcgaaccctggaccttgcatatattatgcattgtccttaccaactgagttaagctc 25391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 52119437 - 52119378
Alignment:
Q  125 gggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||  |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  52119437 gggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaagctc 52119378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 29631265 - 29631188
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||| |  ||||| |||| |||||||||| |||||||||||||||||| | | || ||||||||||||    
T  29631265 tttttttggtggtggccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaagctc 29631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 35191797 - 35191874
Alignment:
Q  105 tcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagc 182  Q
    |||||||| || ||||||| |||||||||  ||  |||||| |||||||||||||||||||| | || ||||||||||    
T  35191797 tctttttttggcggtgtctggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagc 35191874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 17507681 - 17507737
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtc 163  Q
    |||||| ||||||| |  |||||||||| |||||||||| |||||||||||||||||    
T  17507681 ttttttgggtggtggcccgggttcgaatcccgaaccttgcatatattatgcattgtc 17507737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 4216382 - 4216440
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctt 166  Q
    |||||| ||||||||| ||||||||||  |||| ||||| ||||||||||||||||||||    
T  4216382 tttttttggtggtgtccagggttcgaaccccga-ccttgcatatattatgcattgtcctt 4216440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10926519 - 10926472
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctttcaaattgagctaagct 183  Q
    |||||||||| |||||||||||||||||||| | || |||||||||||    
T  10926519 ccgaaccttgcatatattatgcattgtccttaccaactgagctaagct 10926472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 37376572 - 37376631
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctt 166  Q
    ||||||| ||| |||||| |||| |||| | |||| ||||||||||||||||||||||||    
T  37376572 ttttttctgtgatgtctaaggtttgaatcctgaactttgtatatattatgcattgtcctt 37376631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 41817580 - 41817521
Alignment:
Q  105 tcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcc 164  Q
    |||||||| ||||||| |||||||| |||  ||| |||||| ||||||||||||||||||    
T  41817580 tctttttttggtggtggctagggtttgaaccccggaccttgcatatattatgcattgtcc 41817521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 47377361 - 47377408
Alignment:
Q  137 cgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||||||||||||||||||||||| | || |||| |||||||    
T  47377361 cgaaccttgtatatattatgcattgtccttaccaactgagttaagctc 47377408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 16980367 - 16980413
Alignment:
Q  138 gaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| |||||||||||||||||||| | || ||||||||||||    
T  16980367 gaaccttgcatatattatgcattgtccttaccaactgagctaagctc 16980413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 53208042 - 53207972
Alignment:
Q  114 ggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||||| ||||||||||  ||  |||||| ||||||||||||||| |||| | || ||||||||||||    
T  53208042 ggtggtgtcaagggttcgaaccccagaccttgcatatattatgcattgcccttaccaactgagctaagctc 53207972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 1149059 - 1149128
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||| ||||||||||  |   |||||| |||||||||||||||||||| | || ||||||||||||    
T  1149059 gtggtgtccagggttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaagctc 1149128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 25505684 - 25505760
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||  |||||||||  ||  |||||| |||||||||||||||||||| |||| |||| |||||||    
T  25505684 tttttttggtggtgtcc-gggttcgaaccccagaccttgcatatattatgcattgtccttacaaactgagttaagctc 25505760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 38573553 - 38573610
Alignment:
Q  105 tcttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgt 162  Q
    |||||||| |||||||||  |||||||||| |   |||||||||||||||||||||||    
T  38573553 tctttttttggtggtgtccggggttcgaatcctagaccttgtatatattatgcattgt 38573610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 13992715 - 13992675
Alignment:
Q  142 cttgtatatattatgcattgtcctttcaaattgagctaagc 182  Q
    ||||||||||||||||||||||||| | || ||||||||||    
T  13992715 cttgtatatattatgcattgtccttaccaactgagctaagc 13992675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 33224690 - 33224726
Alignment:
Q  147 atatattatgcattgtcctttcaaattgagctaagct 183  Q
    |||||||||||||||||||| | ||||||||||||||    
T  33224690 atatattatgcattgtccttaccaattgagctaagct 33224726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 46469323 - 46469279
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  46469323 accttgaatatattatgcattgtccttaccaactgagctaagctc 46469279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 2053097 - 2053028
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| | ||||||||||  ||| ||||||||||| ||||||||||||||| | ||||||||| |||||    
T  2053097 gtggtggccagggttcgaactccggaccttgtatattttatgcattgtccttaccaattgagctgagctc 2053028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 22902030 - 22901979
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctt 166  Q
    ||||||||  |||||||||| |||||| ||| ||||||||||||||||||||    
T  22902030 gtggtgtcctgggttcgaatcccgaactttgcatatattatgcattgtcctt 22901979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 26400224 - 26400271
Alignment:
Q  137 cgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||| ||||||||| |||||||||||||| | |||||||||||||||    
T  26400224 cgaactttgtatatactatgcattgtccttaccaattgagctaagctc 26400271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 6624855 - 6624778
Alignment:
Q  107 ttttttcggtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| ||||||| |  |||||||||  ||| |||||| |||||||||||||||||| | | || ||||||||||||    
T  6624855 tttttttggtggtggccggggttcgaaccccggaccttgcatatattatgcattgtccatgccaactgagctaagctc 6624778  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 36321508 - 36321553
Alignment:
Q  139 aaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    ||||||| |||||||||||||||||||| | || ||||||||||||    
T  36321508 aaccttgcatatattatgcattgtccttaccaactgagctaagctc 36321553  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 37932401 - 37932332
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| | ||||||||||  ||| |||||| |||||||||||||||||| | | || ||||||||||||    
T  37932401 gtggtggccagggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctc 37932332  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 16133080 - 16133124
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  16133080 accttgcatatattatgcattgtccttaccaactgagctaagctc 16133124  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 39914947 - 39914903
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | ||||||| |||||||    
T  39914947 accttgcatatattatgcattgtccttaccaattgagttaagctc 39914903  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 64279 - 64220
Alignment:
Q  125 gggttcgaataccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| ||| |||||| |||||||||||||||||| | | | |||||||||||||    
T  64279 gggttcgaatcccggaccttgcatatattatgcattgtccataccagttgagctaagctc 64220  T

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Target: scaffold1619 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 1102 - 1054
Alignment:
Q  115 gtggtgtctagggttcgaataccgaaccttgtatatattatgcattgtc 163  Q
    ||||||||| ||||| |||| ||| |||||| |||||||||||||||||    
T  1102 gtggtgtctggggtttgaatcccggaccttgcatatattatgcattgtc 1054  T

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Target: scaffold1379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 1686 - 1638
Alignment:
Q  136 ccgaaccttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||||||| ||||| |||||||||||| | | |||||||||||||||    
T  1686 ccgaaccttgcatatactatgcattgtccatactaattgagctaagctc 1638  T

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Target: scaffold0198 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 19307 - 19263
Alignment:
Q  118 gtgtctagggttcgaataccgaaccttgtatatattatgcattgt 162  Q
    ||||| ||||||||||  ||||||||||||||| |||||||||||    
T  19307 gtgtcaagggttcgaaatccgaaccttgtatattttatgcattgt 19263  T

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Target: scaffold0069 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 52084 - 52128
Alignment:
Q  138 gaaccttgtatatattatgcattgtcctttcaaattgagctaagc 182  Q
    |||||||| ||||||||| |||||||||||| ||||||| |||||    
T  52084 gaaccttgcatatattatacattgtcctttccaattgagttaagc 52128  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 42349 - 42393
Alignment:
Q  140 accttgtatatattatgcattgtcctttcaaattgagctaagctc 184  Q
    |||||| |||||||||||||||||||| | || ||||||||||||    
T  42349 accttgcatatattatgcattgtccttcccaactgagctaagctc 42393  T

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