View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9848_low_16 (Length: 274)
Name: NF9848_low_16
Description: NF9848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9848_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 269
Target Start/End: Original strand, 5901285 - 5901535
Alignment:
| Q |
19 |
gctactgcctctctttactttcatttatgtcaatggtattcttcctattgaagctactcatcatgtttatagaaaccttcagagtttatcttctgatgat |
118 |
Q |
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| T |
5901285 |
gctaatgcctctctttactttcatttatgtcaatggtattcttcctattgaagctactcaccatgtttatagaaaccttcagagtttatcttctgatgat |
5901384 |
T |
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| Q |
119 |
tccttcaaacaaccttacagaactgcttatcatttccaacctccaaagaattggataaatggtaatttacttgatcttaattaatgttttatactctcta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5901385 |
tccttcaaacaaccttacagaactgcttatcatttccaacctccaaagaattggataaatggtaatttacttgatcttaattaatgttttatactctcta |
5901484 |
T |
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| Q |
219 |
tttattttttaaaaatattttacatctctgacagatttttcctttgcttct |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5901485 |
tttattttttaaaaatattttacatctctgacagatttttcctttgcttct |
5901535 |
T |
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