View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9848_low_22 (Length: 243)
Name: NF9848_low_22
Description: NF9848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9848_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 8900489 - 8900667
Alignment:
| Q |
1 |
cataaactattaactaaactatgtaaaatccaacaacatgaagaaaaataaacttacctttgtaatgacaattattgagaagtgaagtaattaacctccg |
100 |
Q |
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| T |
8900489 |
cataaactattaactaaactatgtaaaatccaacaacatgaagaaaaataaacttacctttgtaatggcaattatttagaagtgaagtaattaacctccg |
8900588 |
T |
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| Q |
101 |
agtagcacgatcagattcaacaagaagaacagtaacattttttcttggtagaaacatttcccatctaaatacaccgtcc |
179 |
Q |
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| T |
8900589 |
agtagcacgatcagattcaacaagaagaacagtaacattttttcttggtagaaacatttcccatctaaatacaccgtcc |
8900667 |
T |
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