View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9849_high_3 (Length: 265)
Name: NF9849_high_3
Description: NF9849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9849_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 236
Target Start/End: Complemental strand, 44099590 - 44099363
Alignment:
| Q |
11 |
tgttggttgcaaaatttgatataaggagtacttttcacgtaggattaaggtttgctccaactctg--aattgttttattgtgctaattaggttattgcta |
108 |
Q |
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| T |
44099590 |
tgttggttgcaaaatttgatataaggagtacttttcacgtaggattaaggtttgctccaactctgtgaattgttttattgtgctaattaggttattgcta |
44099491 |
T |
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| Q |
109 |
atataagttctgtaccaattaggttattgctaatgcaagttcagcatggtaagttatacaaagaaagatacattaaagccttgccctatttagaagaaca |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44099490 |
atataagttctgtaccaattaggttattgctaatgcaagttcagcatggtaagttatacaaagaaagatacattaaagccttgccctatttagaagaaca |
44099391 |
T |
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| Q |
209 |
tcagcacaatcctaataaataggtgtat |
236 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
44099390 |
tcagcacaatcctaataaataggtgtat |
44099363 |
T |
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