View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9849_low_1 (Length: 655)

Name: NF9849_low_1
Description: NF9849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9849_low_1
NF9849_low_1
[»] chr5 (53 HSPs)
chr5 (334-639)||(10510905-10511212)
chr5 (196-328)||(10511513-10511645)
chr5 (300-453)||(42641110-42641264)
chr5 (305-478)||(7736271-7736445)
chr5 (305-479)||(30251922-30252097)
chr5 (14-97)||(12498569-12498652)
chr5 (14-97)||(26571133-26571216)
chr5 (14-97)||(34147479-34147562)
chr5 (355-461)||(1041924-1042030)
chr5 (14-96)||(21207229-21207311)
chr5 (14-97)||(12498897-12498980)
chr5 (14-97)||(19514932-19515015)
chr5 (14-97)||(25940523-25940606)
chr5 (14-97)||(26570731-26570814)
chr5 (14-97)||(43464161-43464243)
chr5 (16-97)||(10098521-10098602)
chr5 (14-97)||(34147143-34147224)
chr5 (14-97)||(3888241-3888324)
chr5 (14-97)||(22729409-22729491)
chr5 (14-97)||(37780322-37780404)
chr5 (14-96)||(43463759-43463840)
chr5 (355-481)||(25731185-25731313)
chr5 (376-476)||(1042040-1042140)
chr5 (14-97)||(19514527-19514611)
chr5 (14-97)||(25940983-25941066)
chr5 (18-97)||(37610204-37610282)
chr5 (14-96)||(2817152-2817234)
chr5 (14-96)||(10098910-10098991)
chr5 (305-445)||(1637945-1638086)
chr5 (18-97)||(22729010-22729088)
chr5 (14-85)||(41072183-41072254)
chr5 (14-96)||(3888631-3888713)
chr5 (14-96)||(30401885-30401967)
chr5 (14-102)||(2817544-2817631)
chr5 (18-102)||(37780715-37780799)
chr5 (14-96)||(11316717-11316799)
chr5 (14-96)||(11316943-11317025)
chr5 (14-102)||(37610587-37610674)
chr5 (21-97)||(18817587-18817663)
chr5 (23-96)||(11351405-11351478)
chr5 (305-445)||(31112388-31112529)
chr5 (21-97)||(11350810-11350885)
chr5 (21-97)||(18816954-18817030)
chr5 (14-97)||(42919307-42919389)
chr5 (22-96)||(31569910-31569983)
chr5 (45-97)||(5187830-5187882)
chr5 (356-459)||(17317360-17317464)
chr5 (45-97)||(18433316-18433368)
chr5 (45-97)||(25116061-25116113)
chr5 (45-97)||(25175151-25175203)
chr5 (356-451)||(33085274-33085370)
chr5 (45-97)||(33324838-33324890)
chr5 (305-436)||(35626600-35626732)
[»] chr7 (48 HSPs)
chr7 (305-482)||(31860252-31860430)
chr7 (14-97)||(20419293-20419376)
chr7 (14-97)||(22740158-22740241)
chr7 (14-96)||(18863970-18864052)
chr7 (14-102)||(37888830-37888918)
chr7 (14-97)||(3205062-3205145)
chr7 (14-97)||(9035262-9035345)
chr7 (14-97)||(10533036-10533119)
chr7 (14-97)||(13741559-13741642)
chr7 (14-97)||(13744202-13744284)
chr7 (14-97)||(17156969-17157052)
chr7 (307-445)||(23070190-23070329)
chr7 (14-97)||(37889228-37889311)
chr7 (14-97)||(37972365-37972448)
chr7 (14-96)||(20418891-20418973)
chr7 (14-95)||(48359627-48359707)
chr7 (14-97)||(29292924-29293007)
chr7 (14-97)||(48359322-48359404)
chr7 (14-96)||(22740560-22740641)
chr7 (370-478)||(31245263-31245372)
chr7 (14-102)||(29293315-29293403)
chr7 (14-97)||(37971962-37972045)
chr7 (14-106)||(3204662-3204752)
chr7 (14-97)||(38826882-38826965)
chr7 (308-453)||(40019445-40019590)
chr7 (14-97)||(9034869-9034953)
chr7 (356-451)||(22680724-22680820)
chr7 (14-85)||(18864371-18864442)
chr7 (14-96)||(42418997-42419079)
chr7 (18-96)||(36527387-36527464)
chr7 (364-446)||(7833554-7833637)
chr7 (14-97)||(36527767-36527850)
chr7 (14-97)||(42418593-42418676)
chr7 (22-97)||(46816288-46816363)
chr7 (309-474)||(25240250-25240416)
chr7 (38-97)||(16198970-16199029)
chr7 (21-102)||(44599486-44599567)
chr7 (21-97)||(44600111-44600187)
chr7 (21-97)||(8643742-8643818)
chr7 (21-97)||(13863315-13863391)
chr7 (21-97)||(13863933-13864008)
chr7 (356-442)||(2256443-2256529)
chr7 (337-406)||(3338457-3338527)
chr7 (51-101)||(5735553-5735603)
chr7 (309-478)||(32956494-32956664)
chr7 (45-97)||(3687656-3687708)
chr7 (45-97)||(8953889-8953940)
chr7 (45-97)||(9412325-9412377)
[»] chr4 (62 HSPs)
chr4 (305-472)||(37626694-37626862)
chr4 (300-479)||(33395304-33395484)
chr4 (18-97)||(293190-293269)
chr4 (14-97)||(4239335-4239418)
chr4 (14-97)||(39744434-39744517)
chr4 (14-97)||(43292039-43292122)
chr4 (14-102)||(169408-169496)
chr4 (14-102)||(32703619-32703707)
chr4 (14-97)||(9023649-9023732)
chr4 (14-97)||(25161880-25161963)
chr4 (14-97)||(28196742-28196825)
chr4 (14-97)||(39744032-39744115)
chr4 (14-97)||(9380309-9380392)
chr4 (14-97)||(9380710-9380793)
chr4 (14-97)||(26207715-26207798)
chr4 (14-97)||(28196348-28196431)
chr4 (14-97)||(48405964-48406046)
chr4 (15-97)||(292784-292866)
chr4 (313-446)||(41259980-41260114)
chr4 (356-481)||(53654262-53654388)
chr4 (14-97)||(169015-169099)
chr4 (14-97)||(23539843-23539924)
chr4 (14-97)||(9023246-9023329)
chr4 (14-97)||(23540221-23540304)
chr4 (14-97)||(26207363-26207445)
chr4 (305-477)||(11086241-11086417)
chr4 (14-97)||(32703227-32703310)
chr4 (304-446)||(35422421-35422564)
chr4 (14-97)||(43292326-43292409)
chr4 (14-84)||(44468892-44468962)
chr4 (309-446)||(52837919-52838057)
chr4 (356-451)||(14124199-14124295)
chr4 (14-97)||(39086592-39086675)
chr4 (14-84)||(25162282-25162352)
chr4 (14-102)||(39912456-39912543)
chr4 (356-453)||(37858199-37858298)
chr4 (300-442)||(41163046-41163189)
chr4 (14-81)||(48406354-48406421)
chr4 (309-479)||(16502386-16502556)
chr4 (356-459)||(388392-388497)
chr4 (334-453)||(54335152-54335272)
chr4 (350-445)||(48497420-48497516)
chr4 (14-77)||(12757788-12757851)
chr4 (18-97)||(39912056-39912134)
chr4 (386-446)||(21865192-21865252)
chr4 (386-446)||(21921053-21921113)
chr4 (21-97)||(50678781-50678857)
chr4 (369-452)||(35827787-35827870)
chr4 (14-97)||(36095819-36095902)
chr4 (21-96)||(36096451-36096526)
chr4 (401-445)||(48582187-48582231)
chr4 (21-97)||(50679400-50679476)
chr4 (21-97)||(56505695-56505771)
chr4 (21-96)||(43050610-43050685)
chr4 (14-96)||(12758173-12758254)
chr4 (43-97)||(24775781-24775835)
chr4 (355-458)||(47519251-47519356)
chr4 (45-97)||(13198906-13198958)
chr4 (385-457)||(32906166-32906238)
chr4 (21-97)||(43051228-43051304)
chr4 (21-97)||(45830172-45830248)
chr4 (309-377)||(48582248-48582316)
[»] chr3 (48 HSPs)
chr3 (305-470)||(54153848-54154014)
chr3 (14-97)||(47666304-47666387)
chr3 (14-96)||(53766166-53766248)
chr3 (309-445)||(44765246-44765383)
chr3 (14-102)||(42673265-42673352)
chr3 (14-97)||(48159899-48159982)
chr3 (14-97)||(53687890-53687973)
chr3 (309-475)||(32375193-32375361)
chr3 (14-102)||(10348768-10348856)
chr3 (14-102)||(48160302-48160390)
chr3 (14-101)||(22429565-22429651)
chr3 (14-107)||(44007959-44008052)
chr3 (305-480)||(47510715-47510891)
chr3 (14-102)||(53688272-53688359)
chr3 (14-97)||(26007184-26007266)
chr3 (14-97)||(40848523-40848605)
chr3 (14-97)||(40848930-40849013)
chr3 (14-97)||(42672980-42673062)
chr3 (24-102)||(3353125-3353202)
chr3 (14-96)||(27238869-27238951)
chr3 (307-478)||(4195301-4195473)
chr3 (14-102)||(24485429-24485516)
chr3 (14-85)||(3353520-3353591)
chr3 (312-458)||(3432602-3432749)
chr3 (14-97)||(27238467-27238550)
chr3 (14-97)||(47665913-47665996)
chr3 (14-96)||(26007588-26007670)
chr3 (14-102)||(42456164-42456250)
chr3 (14-86)||(24485034-24485106)
chr3 (14-97)||(36180558-36180639)
chr3 (14-97)||(10348481-10348564)
chr3 (14-97)||(36180959-36181042)
chr3 (324-453)||(42005344-42005474)
chr3 (14-102)||(44008370-44008457)
chr3 (14-97)||(22429160-22429243)
chr3 (21-97)||(21896487-21896562)
chr3 (14-97)||(8314015-8314098)
chr3 (38-97)||(42455792-42455851)
chr3 (38-97)||(53766572-53766631)
chr3 (303-460)||(51312857-51313015)
chr3 (381-439)||(25118636-25118694)
chr3 (381-478)||(20137620-20137715)
chr3 (45-105)||(20969019-20969079)
chr3 (385-474)||(9248375-9248464)
chr3 (45-102)||(10293909-10293966)
chr3 (381-478)||(23278010-23278105)
chr3 (14-66)||(1928403-1928455)
chr3 (45-97)||(10293610-10293662)
[»] scaffold0007 (1 HSPs)
scaffold0007 (336-478)||(246513-246656)
[»] chr1 (67 HSPs)
chr1 (355-481)||(8772419-8772546)
chr1 (14-97)||(26815088-26815171)
chr1 (305-461)||(12188622-12188779)
chr1 (14-103)||(21687021-21687110)
chr1 (300-484)||(26701492-26701677)
chr1 (14-98)||(50526441-50526525)
chr1 (14-97)||(46824247-46824330)
chr1 (14-102)||(9347123-9347211)
chr1 (14-102)||(13918443-13918531)
chr1 (14-102)||(26814691-26814779)
chr1 (14-97)||(4692402-4692485)
chr1 (14-97)||(6703462-6703545)
chr1 (14-97)||(20480170-20480252)
chr1 (16-97)||(20371042-20371121)
chr1 (14-96)||(28634126-28634208)
chr1 (14-96)||(48104681-48104763)
chr1 (14-96)||(50430050-50430132)
chr1 (14-102)||(27172113-27172200)
chr1 (14-102)||(48105085-48105173)
chr1 (14-102)||(50615590-50615677)
chr1 (14-102)||(50623418-50623505)
chr1 (14-97)||(9347520-9347602)
chr1 (14-97)||(19008719-19008802)
chr1 (18-97)||(32163016-32163095)
chr1 (14-96)||(999115-999196)
chr1 (14-96)||(44911406-44911488)
chr1 (14-96)||(46823846-46823928)
chr1 (20-97)||(6703869-6703946)
chr1 (14-102)||(49318135-49318222)
chr1 (14-102)||(49318412-49318499)
chr1 (14-97)||(28633722-28633805)
chr1 (14-97)||(44911027-44911110)
chr1 (14-97)||(49317754-49317836)
chr1 (305-474)||(2193237-2193407)
chr1 (14-96)||(42611583-42611665)
chr1 (305-445)||(44603632-44603773)
chr1 (14-95)||(50949534-50949615)
chr1 (14-97)||(999494-999576)
chr1 (14-97)||(13918836-13918919)
chr1 (14-96)||(42611188-42611270)
chr1 (14-102)||(20371321-20371409)
chr1 (14-102)||(47498298-47498384)
chr1 (24-102)||(20480591-20480668)
chr1 (305-452)||(4448978-4449127)
chr1 (355-444)||(15330851-15330940)
chr1 (29-94)||(32162734-32162799)
chr1 (18-97)||(27172514-27172593)
chr1 (14-97)||(39691969-39692052)
chr1 (318-487)||(42723893-42724065)
chr1 (14-65)||(50429690-50429741)
chr1 (14-96)||(44224088-44224169)
chr1 (21-102)||(6002234-6002315)
chr1 (23-96)||(50949164-50949237)
chr1 (45-109)||(17518602-17518665)
chr1 (21-97)||(49284411-49284487)
chr1 (45-96)||(1176839-1176890)
chr1 (14-97)||(4692024-4692106)
chr1 (357-451)||(7330541-7330636)
chr1 (50-97)||(50615242-50615289)
chr1 (50-97)||(50623070-50623117)
chr1 (23-85)||(21687445-21687507)
chr1 (43-97)||(47498493-47498546)
chr1 (21-98)||(6002870-6002947)
chr1 (45-97)||(47955608-47955660)
chr1 (309-423)||(3895573-3895688)
chr1 (43-97)||(8108991-8109045)
chr1 (45-97)||(47955308-47955360)
[»] chr2 (52 HSPs)
chr2 (14-97)||(7664250-7664333)
chr2 (356-484)||(31915065-31915194)
chr2 (14-97)||(8851551-8851634)
chr2 (337-475)||(8033273-8033410)
chr2 (14-102)||(7664642-7664730)
chr2 (14-97)||(5379928-5380011)
chr2 (14-96)||(8851151-8851233)
chr2 (14-96)||(26692399-26692481)
chr2 (305-479)||(31921207-31921380)
chr2 (14-96)||(41790494-41790575)
chr2 (14-97)||(5378663-5378746)
chr2 (18-97)||(37720206-37720285)
chr2 (14-96)||(26692789-26692871)
chr2 (16-97)||(18750097-18750177)
chr2 (14-99)||(19141444-19141528)
chr2 (14-102)||(17850975-17851062)
chr2 (14-96)||(19141818-19141898)
chr2 (14-97)||(41790881-41790964)
chr2 (14-99)||(6325316-6325401)
chr2 (14-97)||(16910829-16910912)
chr2 (381-460)||(35005209-35005288)
chr2 (14-92)||(6324924-6325002)
chr2 (356-457)||(12800775-12800876)
chr2 (356-452)||(38373355-38373452)
chr2 (14-93)||(7979573-7979650)
chr2 (14-97)||(16911238-16911320)
chr2 (14-97)||(17851371-17851454)
chr2 (14-96)||(5793450-5793532)
chr2 (14-97)||(7979972-7980054)
chr2 (305-459)||(31598006-31598162)
chr2 (309-452)||(16209790-16209934)
chr2 (21-110)||(26842214-26842303)
chr2 (21-97)||(2638822-2638898)
chr2 (21-97)||(2639458-2639534)
chr2 (21-97)||(26841589-26841665)
chr2 (21-97)||(38490817-38490892)
chr2 (14-96)||(18749729-18749810)
chr2 (360-459)||(29140161-29140262)
chr2 (45-102)||(30191225-30191282)
chr2 (21-97)||(18296078-18296154)
chr2 (387-480)||(37519733-37519827)
chr2 (21-96)||(7591204-7591279)
chr2 (381-448)||(13832202-13832269)
chr2 (425-480)||(14845964-14846019)
chr2 (305-399)||(37519639-37519733)
chr2 (337-446)||(2396688-2396798)
chr2 (300-334)||(5525249-5525283)
chr2 (21-67)||(7591826-7591872)
chr2 (381-450)||(4818779-4818847)
chr2 (43-96)||(18055314-18055367)
chr2 (45-97)||(20347464-20347516)
chr2 (45-97)||(30190925-30190977)
[»] chr8 (48 HSPs)
chr8 (14-96)||(34498125-34498207)
chr8 (305-474)||(27982289-27982455)
chr8 (305-474)||(28039591-28039757)
chr8 (14-97)||(37396710-37396793)
chr8 (14-96)||(15444616-15444698)
chr8 (14-96)||(25439095-25439176)
chr8 (14-107)||(16169576-16169669)
chr8 (14-102)||(9623499-9623587)
chr8 (309-480)||(12956216-12956384)
chr8 (306-482)||(22488762-22488945)
chr8 (14-102)||(24473340-24473428)
chr8 (14-102)||(37397114-37397202)
chr8 (14-97)||(17431289-17431372)
chr8 (14-97)||(20861607-20861690)
chr8 (14-97)||(41662523-41662606)
chr8 (304-480)||(41168595-41168773)
chr8 (38-106)||(25438785-25438853)
chr8 (14-97)||(6199065-6199148)
chr8 (14-97)||(24473737-24473820)
chr8 (374-477)||(29374551-29374654)
chr8 (14-97)||(34498524-34498607)
chr8 (21-102)||(9822745-9822826)
chr8 (21-97)||(13936725-13936800)
chr8 (14-102)||(16169171-16169258)
chr8 (356-435)||(44167185-44167265)
chr8 (14-97)||(6198660-6198743)
chr8 (50-101)||(33726692-33726743)
chr8 (14-97)||(2856528-2856611)
chr8 (14-97)||(15444213-15444296)
chr8 (381-484)||(34653333-34653435)
chr8 (361-486)||(31505495-31505620)
chr8 (21-102)||(22851387-22851468)
chr8 (21-102)||(39724024-39724105)
chr8 (21-97)||(9823337-9823413)
chr8 (21-97)||(13937365-13937441)
chr8 (305-479)||(8488605-8488783)
chr8 (21-96)||(13027257-13027332)
chr8 (14-65)||(33727074-33727125)
chr8 (21-102)||(3307335-3307416)
chr8 (14-99)||(15442763-15442848)
chr8 (45-101)||(765732-765788)
chr8 (21-97)||(13026637-13026713)
chr8 (45-97)||(15156185-15156237)
chr8 (385-474)||(3423718-3423807)
chr8 (45-102)||(37752416-37752473)
chr8 (45-97)||(15155885-15155937)
chr8 (45-97)||(41662403-41662455)
chr8 (45-97)||(43245873-43245925)
[»] scaffold0460 (2 HSPs)
scaffold0460 (14-97)||(332-415)
scaffold0460 (18-102)||(736-819)
[»] scaffold0069 (2 HSPs)
scaffold0069 (16-97)||(50077-50156)
scaffold0069 (14-102)||(50475-50563)
[»] scaffold0041 (2 HSPs)
scaffold0041 (14-97)||(38664-38747)
scaffold0041 (14-67)||(38283-38336)
[»] scaffold0017 (2 HSPs)
scaffold0017 (14-97)||(185243-185326)
scaffold0017 (14-97)||(184841-184924)
[»] chr6 (21 HSPs)
chr6 (14-97)||(7654517-7654600)
chr6 (14-97)||(10087827-10087910)
chr6 (14-97)||(33974268-33974351)
chr6 (14-96)||(32733965-32734047)
chr6 (14-102)||(2354406-2354493)
chr6 (14-97)||(2354779-2354862)
chr6 (14-97)||(22755058-22755141)
chr6 (14-81)||(29074341-29074408)
chr6 (14-81)||(29079105-29079172)
chr6 (14-81)||(29106914-29106981)
chr6 (322-445)||(1407313-1407434)
chr6 (14-102)||(22684327-22684414)
chr6 (14-102)||(22754654-22754741)
chr6 (18-85)||(13177029-13177096)
chr6 (21-102)||(33828987-33829068)
chr6 (21-97)||(33829612-33829688)
chr6 (307-473)||(27673651-27673817)
chr6 (305-451)||(29694302-29694449)
chr6 (381-453)||(6454541-6454612)
chr6 (356-459)||(23131462-23131566)
chr6 (45-97)||(18241856-18241908)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-97)||(9907-9991)
[»] scaffold0176 (2 HSPs)
scaffold0176 (14-85)||(19634-19705)
scaffold0176 (14-97)||(20012-20095)
[»] scaffold0802 (2 HSPs)
scaffold0802 (45-97)||(1120-1172)
scaffold0802 (45-97)||(1420-1472)
[»] scaffold0328 (1 HSPs)
scaffold0328 (21-97)||(6771-6847)
[»] scaffold0042 (1 HSPs)
scaffold0042 (381-442)||(83583-83644)


Alignment Details
Target: chr5 (Bit Score: 173; Significance: 1e-92; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 334 - 639
Target Start/End: Complemental strand, 10511212 - 10510905
Alignment:
Q  334 tagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcatt 433  Q
    ||||||| |||| |||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10511212 tagttaaggattccaataatggaaactttgctttggaaatacaagtcttacttttttcttagcaataattacaccatttttcaatgcaaagttactcatt 10511113  T
Q  434 ttagtactttaactaatgcctcaagggctatagttagcattctccttttttaaattgagtccaaatccctaaaatttgatgatc----cgacccctacta 529  Q
    ||| ||||||||| |||||||| ||||| || |||| ||||||||||| || |||||| | |||||||||||||||||||||||    |||||||||||     
T  10511112 ttactactttaaccaatgcctcgagggcgatggttatcattctcctttctttaattgaattcaaatccctaaaatttgatgatccgatcgacccctactc 10511013  T
Q  530 annnnnnnnnccctctttcatatcatcccttgaaagccgtcctattccctcttctaccttcaaagaccattaattaagcacaatatttactgataactgc 629  Q
    |         ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10511012 a--tttttttccctctttcatatcatctcttgaaagccctcctattccctcttctaccttcaaagaccattaattaagcacaatatttactgataacggc 10510915  T
Q  630 tcccaaaaag 639  Q
    ||||||||||    
T  10510914 tcccaaaaag 10510905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 196 - 328
Target Start/End: Complemental strand, 10511645 - 10511513
Alignment:
Q  196 cctttaatcgtatagattattttgaattgattagactcaaaccaacacattcatcatcgagttgaattgattttgattttacacaagacaagatataaat 295  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  10511645 cctttaattgtatagattattttgaattgattagactcaaacgaacacattcatcatcgagttgaattgattctgattttacacaagacaaaatataaat 10511546  T
Q  296 ttgtttaaaggtcttgctaaccagtgtcctaag 328  Q
    |||||||| ||||||||||||||||||| ||||    
T  10511545 ttgtttaagggtcttgctaaccagtgtcttaag 10511513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 300 - 453
Target Start/End: Complemental strand, 42641264 - 42641110
Alignment:
Q  300 ttaaaggtcttgctaaccagtgtc-ctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagca 397  Q
    |||| ||| ||||||||||||||| | |||| |||||||||| ||||  | ||||  ||||||||||||||||||||||||||| |||||||||||| ||    
T  42641264 ttaagggttttgctaaccagtgtcacaaaga-caatagttaaggattctattaatagaaactttgtcttgaaaatacaagtctttacttttttcttatca 42641166  T
Q  398 ataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcc 453  Q
    || ||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||    
T  42641165 atgattacaccatttttcgatgcaaacttacttattttagtactttaaccaatgcc 42641110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 305 - 478
Target Start/End: Complemental strand, 7736445 - 7736271
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| ||||| |||||||||  || ||||  ||||||| ||||||||||||||||| ||| ||||||||||||||| |||    
T  7736445 ggtcttgctaaccagtgccctaagggcaatggttaaagatcccattaatagaaactttatcttgaaaatacaagtctttaattttttcttagcaatcatt 7736346  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcc 478  Q
    || | | ||||| ||| ||| ||||| |||| ||||||||||| |||| | ||||||| || |||||||||||||    
T  7736345 acgccacttttcaatggaaacttacttatttaagtactttaaccaatgtcccaagggcaatggttagcattctcc 7736271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 305 - 479
Target Start/End: Original strand, 30251922 - 30252097
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    ||||||| ||||||||| |||||| ||||| ||||| |||| || ||||  ||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  30251922 ggtcttggtaaccagtgccctaagggcaatggttaaggattccattaatagaaattttgtcttggaaatacaagtctttacttttttcttagcaataatt 30252021  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcct 479  Q
    |||| | |||||||| ||||  || | |||||||||||||||| ||| ||||||  || || ||||| ||||||||    
T  30252022 acaccacttttcgatacaaatatatttattttagtactttaaccaatacctcaaatgcaatggttagaattctcct 30252097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 12498652 - 12498569
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  12498652 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 12498569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 26571133 - 26571216
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  26571133 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 26571216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 34147479 - 34147562
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  34147479 atagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaag 34147562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 355 - 461
Target Start/End: Original strand, 1041924 - 1042030
Alignment:
Q  355 aaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcct 454  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||  ||||||||||||||||||||||     
T  1041924 aaaacttagtcttgaaaatataagttttacttttttcttagcaattattacaccaattttcgatacaaacttactttttttagtactttaactaatgccc 1042023  T
Q  455 caagggc 461  Q
    |||||||    
T  1042024 caagggc 1042030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 21207311 - 21207229
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  21207311 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 12498897 - 12498980
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  12498897 atagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 12498980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 19514932 - 19515015
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  19514932 atagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 19515015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 25940606 - 25940523
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||| ||||| ||||||||||    
T  25940606 atagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaag 25940523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26570814 - 26570731
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||    
T  26570814 ataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaag 26570731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 43464161 - 43464243
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  43464161 atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaag 43464243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 10098602 - 10098521
Alignment:
Q  16 agggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||| ||||||| || |||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  10098602 agggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaag 10098521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 34147224 - 34147143
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |||  |||||||||||||||    
T  34147224 atagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactataaggg--aaaagtgcaattaag 34147143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 3888324 - 3888241
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||  ||||||||||||| ||| |||||||||||    
T  3888324 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaag 3888241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 22729409 - 22729491
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||| ||||||||| |||||||||||||||    
T  22729409 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggg-aaaagtgcaattaag 22729491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 37780404 - 37780322
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||||||||  ||||||||||||| |||||||||||||||    
T  37780404 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactataggggg-aaaagtgcaattaag 37780322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 43463840 - 43463759
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||| |||| ||||||||||||||    
T  43463840 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggg-aaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 355 - 481
Target Start/End: Complemental strand, 25731313 - 25731185
Alignment:
Q  355 aaaactttgtcttgaaaatacaagtcttactttttt--cttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgc 452  Q
    ||||||||||||| ||||| ||| ||||  ||||||  ||||||||||||||||| | ||||| ||||||| ||||| |||||||||||||||| |||||    
T  25731313 aaaactttgtcttaaaaattcaaatctttattttttttcttagcaataattacacaacttttctatgcaaacttacttattttagtactttaaccaatgc 25731214  T
Q  453 ctcaagggctatagttagcattctccttt 481  Q
    |  || ||| || ||||||||||||||||    
T  25731213 ccaaaaggcaatggttagcattctccttt 25731185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 376 - 476
Target Start/End: Original strand, 1042040 - 1042140
Alignment:
Q  376 aagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattc 475  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||  |||||||||||||||||||||| ||| ||| || |||| |||||    
T  1042040 aagttttacttttttcttagcaattattacaccaattttcgatgcaaacttactttttttagtactttaactaatgccccaaaggcaatggttaacattc 1042139  T
Q  476 t 476  Q
    |    
T  1042140 t 1042140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 19514611 - 19514527
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatag-ggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||| ||||  ||||||||||||||    
T  19514611 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaag 19514527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 25940983 - 25941066
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||| |||| | |||||||||| || |||||||||||||||    
T  25940983 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaag 25941066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 37610282 - 37610204
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||  ||||||||||||| |||||||||||||||    
T  37610282 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactataggggg-aaaagtgcaattaag 37610204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 2817234 - 2817152
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||| |||||| |||||||| |||||||||  ||||||||||| | ||||||||||||||    
T  2817234 atagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 10098910 - 10098991
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||  |||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| || ||||||||||||||    
T  10098910 ataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggagg-aaaagtgcaattaa 10098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 1637945 - 1638086
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    |||||||||||||||| || |||| ||||| ||||| ||||  | ||||  ||| ||||||||| |||||||| | || |||||||||||||||||||||    
T  1637945 ggtcttgctaaccagtatcttaagggcaatggttaatgattctattaatataaattttgtcttggaaatacaaatttttacttttttcttagcaataatt 1638044  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaa 445  Q
    |||| | |||| |||||||| ||| | |||||||| ||||||    
T  1638045 acacaactttttgatgcaaacttatttattttagttctttaa 1638086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 22729088 - 22729010
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| ||||||||  ||||||||| |||||||| | ||||||||||||| |||||||||||||||    
T  22729088 ggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactataggggg-aaaagtgcaattaag 22729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 41072183 - 41072254
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaa 85  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| | |||||||| |||||||||| ||||||    
T  41072183 atagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactataggaggaaaa 41072254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 3888631 - 3888713
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||  ||| |||| | || ||||||||||||||    
T  3888631 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 30401967 - 30401885
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||||| |||| |||||||||| |||||||||| |||||||  ||||||||| | | ||||||||||||||    
T  30401967 atagggggcaaaatcgctagtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaa 30401885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 2817544 - 2817631
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||| |||||||||||||||| ||||||| || || ||||| ||||||||   ||||||||||||| ||||||||||||||||||||    
T  2817544 atagggagcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactataggggg-aaaagtgcaattaagtcaaa 2817631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 37780715 - 37780799
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||||||   ||||||||||||| |||||| |||||||| ||||    
T  37780715 ggggcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagccaaa 37780799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 11316799 - 11316717
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||| |||||||| ||| ||| || |||||||||| |||||||  |||||||||| || ||||||||||||||    
T  11316799 atagggggcaaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 11316943 - 11317025
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||| ||| |||| |||||||||||||| |||||||||  ||| || || || |||||||||||||||    
T  11316943 atagggggcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaattaa 11317025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 37610587 - 37610674
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| |||| ||| |||||||||| ||||||||   |||||||||||||  ||||| |||||||| ||||    
T  37610587 atagggggcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggg-gaaagtacaattaagccaaa 37610674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 18817587 - 18817663
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  18817587 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 18817663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 11351405 - 11351478
Alignment:
Q  23 aaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||| ||| ||||||||||||||| |||||||||  |||  ||||| |  ||||||||||||||    
T  11351405 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 31112388 - 31112529
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| ||||| ||||| |||| || ||||  |||  ||||||| |||||||||| | |||| ||||| | |  |||||||    
T  31112388 ggtcttgctaaccagtgccctaagggcaatggttaatgattccattaatagaaatattgtcttaaaaatacaaggctttacatttttttaaataataatt 31112487  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaa 445  Q
    |||| || |||| || |||| ||||| |||||| || |||||    
T  31112488 acaccatatttcaatacaaacttacttattttaatagtttaa 31112529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 11350885 - 11350810
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||  |||  |||||||  |||| ||||||||||    
T  11350885 gcaaaatcgctcgtttaaaaatatggggtgcaaaa-tgcacaattggcaaaagataggggtgaaaaatgcaattaag 11350810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18817030 - 18816954
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||| ||||||||||    
T  18817030 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 18816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 42919389 - 42919307
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||| |||||||||||||||| |||  ||| |||| ||||| |||||||||  ||| |||| |||||||||| |||||||||    
T  42919389 atagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatata-ggggaaaaagagcaattaag 42919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 31569983 - 31569910
Alignment:
Q  22 caaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||| ||||||| |||  ||| |||||||||| |||||||||| |||  |||||||| ||||||||||||||    
T  31569983 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggg-aaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 5187830 - 5187882
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||| | |||  ||| |||| |||||||||||||||    
T  5187830 ggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaag 5187882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 459
Target Start/End: Complemental strand, 17317464 - 17317360
Alignment:
Q  356 aaactttgtcttgaaaatacaag-tcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcct 454  Q
    ||||||||||||| ||||||||  | |||| ||| |||||  |||||| |||| | |||| |||||||| ||| | ||||||  |||||||| |||||||    
T  17317464 aaactttgtcttggaaatacaaacttttacctttgtcttaataataatcacaccactttttgatgcaaatttattaattttaacactttaaccaatgcct 17317365  T
Q  455 caagg 459  Q
    |||||    
T  17317364 caagg 17317360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 18433316 - 18433368
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  |||||||| |||||||||||||||    
T  18433316 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 18433368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 25116061 - 25116113
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  |||||||| |||||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 25116113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 25175151 - 25175203
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  |||||||| |||||||||||||||    
T  25175151 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 25175203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 451
Target Start/End: Complemental strand, 33085370 - 33085274
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatg 451  Q
    ||||||||||||||||||| || | || |||||| |||||||||||| ||||| | ||||  ||||||| || || ||||||  |||||||| ||||    
T  33085370 aaactttgtcttgaaaatataaatttttacttttgtcttagcaataactacaccacttttgtatgcaaacttgctaattttaacactttaaccaatg 33085274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 33324838 - 33324890
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||  ||||||||| |||  ||||||| ||||||||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaag 33324890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 35626732 - 35626600
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaag-tcttacttttttcttagcaataatt 403  Q
    |||||||||||| |||| ||||||  |||| ||||| || | || ||||  ||| ||||| ||||||||| ||| | |||||||| ||||| |||||||     
T  35626732 ggtcttgctaactagtgccctaaggacaatggttaaggaatccattaatagaaattttgttttgaaaatataagtttttacttttgtcttaccaataatc 35626633  T
Q  404 acactatttttcgatgcaaagttactcatttta 436  Q
     ||||| ||||  ||||||| ||||| ||||||    
T  35626632 gcactacttttttatgcaaatttactaatttta 35626600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 3e-53; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 305 - 482
Target Start/End: Original strand, 31860252 - 31860430
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| ||||| ||||||||||  ||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||||||    
T  31860252 ggtcttgctaaccagtgccctaagggcaatggttaaagattctaataatgaaaactttgtcttggaaatacaagtctttactttcttcttatcaataatt 31860351  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctttt 482  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||| ||||| ||| || ||||||||| |||||||    
T  31860352 acaccatttttcgatgcaaacttactcattttagtactttaaccaatggctcaatggcaatggttagcattatcctttt 31860430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 20419293 - 20419376
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  20419293 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 20419376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 22740241 - 22740158
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  22740241 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 22740158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18864052 - 18863970
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  18864052 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 37888918 - 37888830
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  37888918 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 37888830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 3205062 - 3205145
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  3205062 atagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 3205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9035262 - 9035345
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  9035262 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 9035345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 10533119 - 10533036
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  10533119 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 10533036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 13741642 - 13741559
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  13741642 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaag 13741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13744202 - 13744284
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  13744202 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaag 13744284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 17157052 - 17156969
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  17157052 atagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 17156969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 307 - 445
Target Start/End: Original strand, 23070190 - 23070329
Alignment:
Q  307 tcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattac 405  Q
    ||||||||||||||| ||||||  |||| |||||  ||| || ||||  ||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  23070190 tcttgctaaccagtgccctaaggacaatggttaagaattccattaatagaaactttgtcttggaaatacaagtctttacttttttcttagcaatgattac 23070289  T
Q  406 actatttttcgatgcaaagttactcattttagtactttaa 445  Q
    || | ||||||||||||| ||||| |||||| ||||||||    
T  23070290 accacttttcgatgcaaatttacttattttaatactttaa 23070329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 37889228 - 37889311
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  37889228 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37889311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 37972365 - 37972448
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  37972365 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37972448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 20418973 - 20418891
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  20418973 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 48359627 - 48359707
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaatta 95  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  48359627 atagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactata-ggggaaaaagtgcaatta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 29293007 - 29292924
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  29293007 atagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 29292924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 48359404 - 48359322
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  48359404 atagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaag 48359322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22740560 - 22740641
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  22740560 atagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 370 - 478
Target Start/End: Original strand, 31245263 - 31245372
Alignment:
Q  370 aaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagtt 468  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||| |||||| || | || || |||    
T  31245263 aaatacaagtcttcacttttgtcttagcaataattacaccatttttcgatgcaaacttacttattttagtacttcaaccaatgccccatgagcaatggtt 31245362  T
Q  469 agcattctcc 478  Q
    ||||||||||    
T  31245363 agcattctcc 31245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 29293315 - 29293403
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||||||  ||||||||||||| |||| |||||||||| ||||    
T  29293315 atagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagccaaa 29293403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 37972045 - 37971962
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||| |||||  |||||||||||||||    
T  37972045 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaag 37971962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 3204752 - 3204662
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaacttt 106  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||||||  |||||||||||||  |||||||||||||| ||| ||||    
T  3204752 atagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagccaatcttt 3204662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 38826882 - 38826965
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||| || |||||| |||||||| |||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  38826882 atagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaag 38826965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 308 - 453
Target Start/End: Original strand, 40019445 - 40019590
Alignment:
Q  308 cttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataattaca 406  Q
    |||| |||||| |||| |||  ||||| ||||| |||| || |||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  40019445 cttgttaaccaatgtcttaaatgcaatggttaaggattccattaataaaaactttgtcttggaaatacaagtctttacttttttcttagcaataa-taca 40019543  T
Q  407 ctatttttcgatgcaaagttactcattttagtactttaactaatgcc 453  Q
      | ||||| ||||||| ||| | |||||| ||||||||| ||||||    
T  40019544 tcacttttcaatgcaaacttatttattttaatactttaaccaatgcc 40019590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9034953 - 9034869
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactat-ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||| |||||||||  ||| ||||||||| |||||||||||||||    
T  9034953 atagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaag 9034869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 451
Target Start/End: Complemental strand, 22680820 - 22680724
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatg 451  Q
    |||| |||||||||||||| ||||||| | ||||||||||||||| ||||||| | ||||||||||||| ||||| |||| ||||||||||| ||||    
T  22680820 aaacattgtcttgaaaataaaagtctttatttttttcttagcaatcattacaccacttttcgatgcaaacttacttatttaagtactttaaccaatg 22680724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 18864371 - 18864442
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaa 85  Q
    ||||||||||||||||||| ||| |||||||| |||||||||| |||||||||  |||||||||||||||||    
T  18864371 atagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaa 18864442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 42418997 - 42419079
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactat-ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||| |||||||||||  |||||||||  ||||||||||||| ||||||||||||||    
T  42418997 atagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactataggggg-aaaagtgcaattaa 42419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 36527464 - 36527387
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||| ||||| | |||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  36527464 ggggaaaaattgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 7833554 - 7833637
Alignment:
Q  364 tcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaac 446  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  ||||||  ||||||| ||| | ||||||||||||||||    
T  7833554 tcttggaaatacaagtctttacttttttcttagcaataattacatcatttttttatgcaaacttatttattttagtactttaac 7833637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 36527767 - 36527850
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||| |||||  |||||||| | || |||| ||||||||||    
T  36527767 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaag 36527850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 42418676 - 42418593
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||| || | |||||| ||||||||   ||||||||||||| ||||||| |||||||    
T  42418676 atagggggcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaag 42418593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 46816288 - 46816363
Alignment:
Q  22 caaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||| ||| ||||||||||||||| ||| ||||| ||||  |||| |||||||||||||||||||    
T  46816288 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaag 46816363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 474
Target Start/End: Complemental strand, 25240416 - 25240250
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacac 407  Q
    ||||||||||||||||||||  |||| |||||  |||  | ||||  ||| ||||||||| ||| |||| |||| | |||||||||| |||| |||||||    
T  25240416 ttgctaaccagtgtcctaaggacaatggttaagaattctattaatagaaattttgtcttggaaaaacaaatctttatttttttcttatcaatgattacac 25240317  T
Q  408 tatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcatt 474  Q
     | | ||||||||||| ||||| ||||| |||||||||  |||| | ||||||| || |||||||||    
T  25240316 cactgttcgatgcaaacttacttattttcgtactttaatcaatgtcccaagggcaatggttagcatt 25240250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 16198970 - 16199029
Alignment:
Q  38 aaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| |||||||||  ||||||||  |||||||||||||||||||    
T  16198970 aaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaag 16199029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 44599567 - 44599486
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  ||||||||||||||| ||||    
T  44599567 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 44599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 44600111 - 44600187
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  44600111 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 44600187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 8643742 - 8643818
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| | |  |||||||||||||| ||||||||| ||||  ||||||   |||||||||||||||    
T  8643742 gcaaaatcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaag 8643818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 13863391 - 13863315
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||| ||||||||||    
T  13863391 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 13863315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 13863933 - 13864008
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| ||| |||||||||| |||| |||||||||  |||  |||||||  |||||||||||||||    
T  13863933 gcaaaatcgctcgtttaaaaatatggggtgc-aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 13864008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 2256443 - 2256529
Alignment:
Q  356 aaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactt 442  Q
    ||||| ||||||  |||| ||||| ||  ||||||||||| ||| ||||||| | ||||||||||||| ||||| |||||| |||||    
T  2256443 aaactatgtcttagaaatgcaagtatttattttttcttaggaatgattacaccacttttcgatgcaaacttacttattttaatactt 2256529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 3338457 - 3338527
Alignment:
Q  337 ttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattaca 406  Q
    |||| |||| || |||| ||||| ||||||||||||||||| | || |||||| |||||||||||||||||    
T  3338457 ttaaggattccattaataaaaacattgtcttgaaaatacaaatttttacttttgtcttagcaataattaca 3338527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 5735553 - 5735603
Alignment:
Q  51 caaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaa 101  Q
    |||||| |||||||| |||||  ||||||||||||||||||||||| ||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaaatcaa 5735603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 309 - 478
Target Start/End: Complemental strand, 32956664 - 32956494
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaag-tcttacttttttcttagcaataattacac 407  Q
    ||||||||||||| |||||  ||| | |||||||| | || ||||  ||| | ||||||| ||||| ||  | |||||||| ||||  ||||||| ||||    
T  32956664 ttgctaaccagtgccctaacggcagtggttaaagaatccactaatagaaattctgtcttggaaatataaacttttacttttgtcttgccaataatcacac 32956565  T
Q  408 tatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcc 478  Q
     |||||| |||||||||||||  ||||||  |  ||||| ||||||||||||||  |  ||||||||||||    
T  32956564 cattttttgatgcaaagttacgaattttatcagcttaaccaatgcctcaagggcactcattagcattctcc 32956494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 3687656 - 3687708
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 3687708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 8953889 - 8953940
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||| | |||  |||||||| |||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagataggggg-aaaagtgcaattaag 8953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 9412325 - 9412377
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 9412377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 9e-38; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 305 - 472
Target Start/End: Complemental strand, 37626862 - 37626694
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    |||||||||||| |||||||| || ||||| ||||| ||||||| ||||  ||||||||||||| ||||||||||||| |||||||||||| |||| ||     
T  37626862 ggtcttgctaactagtgtcctgagggcaatggttaaggatttcattaatataaactttgtcttggaaatacaagtctttacttttttcttatcaatgatc 37626763  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagca 472  Q
    |||| | ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| || |||||||    
T  37626762 acaccacttttcgatgcaaacttacttattttagtactttaaccaatgccccaagggcaatggttagca 37626694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 479
Target Start/End: Complemental strand, 33395484 - 33395304
Alignment:
Q  300 ttaaaggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaa 398  Q
    |||||||  ||||||| ||| | |||||| ||||| ||||| |||| |||||||| ||||||| ||||| ||||||||||||| |||| |||||||||||    
T  33395484 ttaaaggggttgctaatcagggccctaagggcaatggttaatgattccaataatggaaactttatcttggaaatacaagtctttacttatttcttagcaa 33395385  T
Q  399 taattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcct 479  Q
    |||||| || | |||| |||| ||| |||||||||||| ||||||||| |||| | ||| ||| || ||||||||||||||    
T  33395384 taattataccactttttgatgtaaacttactcattttaatactttaaccaatgtcccaaaggcaattgttagcattctcct 33395304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 293190 - 293269
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  293190 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaag 293269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 4239335 - 4239418
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  4239335 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 4239418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 39744434 - 39744517
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  39744434 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 39744517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 43292122 - 43292039
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  43292122 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaag 43292039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 169408 - 169496
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||| ||||    
T  169408 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagccaaa 169496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 32703619 - 32703707
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  32703619 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 32703707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9023649 - 9023732
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  9023649 atagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 9023732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 25161963 - 25161880
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  25161963 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25161880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 28196742 - 28196825
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  28196742 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 28196825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 39744115 - 39744032
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  39744115 atagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaag 39744032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9380392 - 9380309
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  9380392 atagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 9380309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9380710 - 9380793
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  9380710 atagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 9380793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 26207715 - 26207798
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||| |||| ||||||||||    
T  26207715 atagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaag 26207798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 28196431 - 28196348
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||| ||||||||| |||||||||||||||    
T  28196431 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaag 28196348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 48406046 - 48405964
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||||    
T  48406046 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactataggggg-aaaagtgcaattaag 48405964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 292866 - 292784
Alignment:
Q  15 tagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  292866 tagggggcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaag 292784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 313 - 446
Target Start/End: Original strand, 41259980 - 41260114
Alignment:
Q  313 taaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataattacactatt 411  Q
    ||||||||| |||||| ||||| ||||| |||| || ||||  ||||||||||||||||||||||||| ||| |||||| ||| |||| ||||||| | |    
T  41259980 taaccagtgccctaagggcaatggttaaggattccattaatagaaactttgtcttgaaaatacaagtctttattttttttttatcaatgattacaccact 41260079  T
Q  412 tttcgatgcaaagttactcattttagtactttaac 446  Q
    |||||||||||| ||||| |||||| |||||||||    
T  41260080 tttcgatgcaaacttacttattttaatactttaac 41260114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 356 - 481
Target Start/End: Complemental strand, 53654388 - 53654262
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcct 454  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||  |||| |||||| ||||||||| |||| |     
T  53654388 aaactttgtcttgtaaatacaagtctttacttttttcttcgcaataattacaccatttttcgatgcaaacatacttattttaatactttaaccaatgacc 53654289  T
Q  455 caagggctatagttagcattctccttt 481  Q
     || | | || ||||||||||||||||    
T  53654288 taatgacaatggttagcattctccttt 53654262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 169099 - 169015
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactataggggga-aaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||  |||||||||||||| |||||||||||||||    
T  169099 atagggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaag 169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 23539924 - 23539843
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||||||||||  ||||||||||||||    
T  23539924 atagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaag 23539843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9023329 - 9023246
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||  ||||||||||||  |||||||||||||||    
T  9023329 atagggggcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaag 9023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 23540221 - 23540304
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||  |||||||||||||||    
T  23540221 atagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaag 23540304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26207445 - 26207363
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||  ||||||||||||||    
T  26207445 atagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggg-gaaagtgcaattaag 26207363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 305 - 477
Target Start/End: Complemental strand, 11086417 - 11086241
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| ||||| ||||| ||||||| ||||   |||||| ||||| |||||||| || |||||||||||||||||||| ||    
T  11086417 ggtcttgctaaccagtgccctaagggcaatggttaaggatttcattaataggaactttatcttggaaatacaaatctttacttttttcttagcaatattt 11086318  T
Q  404 acac----tatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctc 477  Q
    | ||    | |||||  || |||| ||||| |||||| ||||||||| |||||| ||||||| || ||||||||||||    
T  11086317 atacctaatttttttttatacaaacttacttattttaatactttaaccaatgcc-caagggcaatggttagcattctc 11086241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 32703310 - 32703227
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||| |||||||| ||| |||||||||  ||| ||||||||| |||||||||||||||    
T  32703310 atagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaag 32703227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 304 - 446
Target Start/End: Complemental strand, 35422564 - 35422421
Alignment:
Q  304 aggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtct-tacttttttcttagcaataat 402  Q
    ||||||||||||| |||| |||||||||||| |||||||| |||  |||| |||||||||  ||| ||||| ||||   ||||||| ||||| |||||||    
T  35422564 aggtcttgctaactagtgccctaagagcaatggttaaagaattctttaataaaaactttgcattggaaatataagtaactacttttgtcttatcaataat 35422465  T
Q  403 tacactatttttcgatgcaaagttactcattttagtactttaac 446  Q
    ||||||||||||  ||||||| ||||| ||||||  ||||||||    
T  35422464 tacactattttttaatgcaaacttactaattttaacactttaac 35422421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 43292326 - 43292409
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||  |||||| |||||| |||| ||||||||||    
T  43292326 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaag 43292409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 44468892 - 44468962
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaa 84  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||  ||||||||||||||||    
T  44468892 atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaa 44468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 309 - 446
Target Start/End: Original strand, 52837919 - 52838057
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacac 407  Q
    |||||| ||| |||| || | ||||| ||||||||||||| ||||  |||| || | ||| ||||||| ||||| |||||||||||| ||||||||| ||    
T  52837919 ttgctatccactgtcatatgggcaatggttaaagatttcattaatagaaacattattttggaaatacatgtctttacttttttcttaacaataattatac 52838018  T
Q  408 tatttttcgatgcaaagttactcattttagtactttaac 446  Q
     ||||||||||||||| ||||| |||||| |||||||||    
T  52838019 catttttcgatgcaaacttacttattttaatactttaac 52838057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 451
Target Start/End: Complemental strand, 14124295 - 14124199
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatg 451  Q
    ||||||||| ||| ||||| |||| || |||||||||||||||| |||||||| ||||||||||||||| ||||| |||||| ||||||||| ||||    
T  14124295 aaactttgttttggaaatataagtttttacttttttcttagcaaaaattacaccatttttcgatgcaaatttacttattttaatactttaaccaatg 14124199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 39086592 - 39086675
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||  |||||||||| |||||||||  |||||||| |||  |||||||||||||||    
T  39086592 atagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaag 39086675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 25162282 - 25162352
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaa 84  Q
    ||||||||||||||||||||||| ||||||||| |||||||||  ||||||||| ||| ||||||||||||    
T  25162282 atagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatatagggggaaa 25162352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 39912456 - 39912543
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||| ||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||  || ||||||| ||||||| ||||    
T  39912456 ataggtggcaaaatcactcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagaagg-aaaagtgtaattaagccaaa 39912543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 453
Target Start/End: Complemental strand, 37858298 - 37858199
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattt-tagtactttaactaatgcc 453  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| |  | ||||||||||||| || || |||| |||||||||||| ||||||    
T  37858298 aaactttatcttgaaaatacaagtttttacttttttcttagcaataattaaatcacttttcgatgcaaacttccttatttatagtactttaaccaatgcc 37858199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 442
Target Start/End: Complemental strand, 41163189 - 41163046
Alignment:
Q  300 ttaaaggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaa 398  Q
    |||| ||| ||||||||||||| |||||   |||| |||||| |||  | |||| ||||  |||||||  |||||||||| || ||||||||||||||||    
T  41163189 ttaagggtgttgctaaccagtgccctaaagacaatggttaaacattctattaataaaaatgttgtcttagaaatacaagtatttacttttttcttagcaa 41163090  T
Q  399 taattacactatttttcgatgcaaagttactcattttagtactt 442  Q
    ||||||||| | ||||||||| ||| | ||| ||||||||||||    
T  41163089 taattacaccacttttcgatgtaaactaacttattttagtactt 41163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 48406354 - 48406421
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactataggggg 81  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||  ||| |||||||||    
T  48406354 atagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggg 48406421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 479
Target Start/End: Original strand, 16502386 - 16502556
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacact 408  Q
    ||||||||||||| |||||| ||||| ||||| || | || || |  ||||||||||||| |||||||| | ||  |||| |||| |||||| ||||||     
T  16502386 ttgctaaccagtgccctaagggcaatggttaaggaatccattagtagaaactttgtcttggaaatacaaatttttattttctcttggcaatatttacaca 16502485  T
Q  409 atttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcct 479  Q
    | |||| | |  | ||||||| |||||||||||||||| |||||| |||||||  |  |||||||||||||    
T  16502486 actttttgttttagagttacttattttagtactttaaccaatgccccaagggcactcattagcattctcct 16502556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 356 - 459
Target Start/End: Original strand, 388392 - 388497
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-ac-ttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcc 453  Q
    ||||||||||||||||||| ||||||| || ||||||||| ||||||||| |||   ||||| ||||||| ||| | |||||||||||||||| ||||||    
T  388392 aaactttgtcttgaaaatataagtctttacattttttcttcgcaataattgcacccattttccatgcaaatttatttattttagtactttaaccaatgcc 388491  T
Q  454 tcaagg 459  Q
     |||||    
T  388492 ccaagg 388497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 334 - 453
Target Start/End: Original strand, 54335152 - 54335272
Alignment:
Q  334 tagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataattacacta-tttttcgatgcaaagttactca 431  Q
    ||||||||||||||| ||||  ||| ||| ||||| ||||||||||| |||||| |||||| ||||||||| ||| | |||||  ||||||| ||||| |    
T  54335152 tagttaaagatttcactaatagaaattttatcttggaaatacaagtctttacttgtttctt-gcaataattgcaccactttttttatgcaaacttactta 54335250  T
Q  432 ttttagtactttaactaatgcc 453  Q
    ||||||||||||||| ||||||    
T  54335251 ttttagtactttaaccaatgcc 54335272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 48497516 - 48497420
Alignment:
Q  350 taatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaa 445  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||| |||| |||| || | |||||||| |||| ||| | |||||| ||||||||    
T  48497516 taataaaaactttgtcttgaaaatacaagtctttatttttttcttatcaatgattataccacttttcgatacaaacttatttattttaatactttaa 48497420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 12757851 - 12757788
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatag 77  Q
    ||||||| ||||||||||||||| |||||||| | |||||||| |||||||||| |||||||||    
T  12757851 ataggggacaaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatag 12757788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 39912134 - 39912056
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||| |||||||||  || ||||| |||||||| ||||||||||||| | |||||||||||||||    
T  39912134 ggggcaaaatcgttcgtttaaaactatgga-tgtaaaatcgcacaattaataaactatagggaggaaaagtgcaattaag 39912056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 21865252 - 21865192
Alignment:
Q  386 tttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaac 446  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||    
T  21865252 tttttcttagcaatgattacaccatttttcgatgcaaacttacttattttaaaactttaac 21865192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 21921113 - 21921053
Alignment:
Q  386 tttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaac 446  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| ||||||  ||||||||    
T  21921113 tttttcttagcaatgattacaccatttttcgatgcaaacttacttattttaaaactttaac 21921053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 50678857 - 50678781
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  50678857 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 50678781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 369 - 452
Target Start/End: Original strand, 35827787 - 35827870
Alignment:
Q  369 aaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgc 452  Q
    |||||| |||| ||| |||||||||| |||||||||||  ||||||||| ||||| ||||| |||||| || |||||| |||||    
T  35827787 aaaataaaagttttatttttttcttaacaataattacatcatttttcgaagcaaacttacttattttaatattttaaccaatgc 35827870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 36095902 - 36095819
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||| |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||| ||||||||||    
T  36095902 atagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 36095819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 36096451 - 36096526
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  ||||||||||||||    
T  36096451 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 48582231 - 48582187
Alignment:
Q  401 attacactatttttcgatgcaaagttactcattttagtactttaa 445  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||||    
T  48582231 attacaccatttttcgatgcaaacttacttattttagtactttaa 48582187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 50679400 - 50679476
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| | |||||||  |||  |||||||  |||||||||||||||    
T  50679400 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaag 50679476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 56505771 - 56505695
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||  || ||| ||||||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  56505771 gcaaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 56505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 43050685 - 43050610
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||| ||||||| |||  |||||||||||||| ||||||||| ||||  ||||||   ||||||||||||||    
T  43050685 gcaaaatcactcgtttaaaaacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 12758173 - 12758254
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||| |||||||| ||||||||| ||||||||   || |||||  |||||||| ||  |||||||||||||||    
T  12758173 atagggggcaaaattgctcgtttaaaactatggcgtgcaaaaacacataattggcaaactata-ggaaaaaaagtgcaattaa 12758254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 24775781 - 24775835
Alignment:
Q  43 atggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||| |||||||||| |||  ||||| || |||||||||||||||    
T  24775781 atggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaag 24775835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 458
Target Start/End: Original strand, 47519251 - 47519356
Alignment:
Q  355 aaaactttgtcttgaaaatacaagtctt--acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgc 452  Q
    |||||||||||||||||||| |||| ||  | ||| || ||| |||||||||||| | ||||  ||||||| ||||| ||||||  |||||||| |||||    
T  47519251 aaaactttgtcttgaaaatataagtttttaattttgtttttatcaataattacacaactttttaatgcaaacttactaattttaacactttaaccaatgc 47519350  T
Q  453 ctcaag 458  Q
    | ||||    
T  47519351 cccaag 47519356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 13198906 - 13198958
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  |||||||| |||||||||||||||    
T  13198906 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 13198958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 457
Target Start/End: Original strand, 32906166 - 32906238
Alignment:
Q  385 ttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaa 457  Q
    |||| |||||||||||||||||  ||||||  ||||||| ||||| ||||||  |||||||  ||||||||||    
T  32906166 ttttgtcttagcaataattacaacattttttaatgcaaacttactaattttaacactttaatcaatgcctcaa 32906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 43051228 - 43051304
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  ||||||||||||||  ||||||||  |||  |||||||  |||| ||||||||||    
T  43051228 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaag 43051304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 45830172 - 45830248
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| ||| |||  |||||||| ||||| |||||||||| |||  |||||||  |||||||| ||||||    
T  45830172 gcaaaatcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaag 45830248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 48582316 - 48582248
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaa 377  Q
    |||||||| ||| || |||| ||||| ||||| ||||||| ||||  ||||||| ||||||||||||||    
T  48582316 ttgctaactagtatcttaagtgcaattgttaaggatttcattaatagaaactttatcttgaaaatacaa 48582248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 305 - 470
Target Start/End: Complemental strand, 54154014 - 54153848
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| ||| | |||||||||| || |||| ||||||||||| || ||||||||||||| |||||||||||| |||| |||    
T  54154014 ggtcttgctaaccagtgccctaagggcagtggttaaagattccattaataaaaactttgtcatggaaatacaagtctttacttttttcttatcaatgatt 54153915  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttag 470  Q
    | || | ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| || |||||    
T  54153914 aaaccacttttcgatgcaaacttacttattttagtactttaaccaatgccccaagggcaatggttag 54153848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 47666304 - 47666387
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  47666304 atagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaag 47666387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 53766248 - 53766166
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  53766248 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 309 - 445
Target Start/End: Original strand, 44765246 - 44765383
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataattacac 407  Q
    ||||||||||||| |||||| ||| | ||||| |||| |||||||| ||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||    
T  44765246 ttgctaaccagtgccctaagggcagtggttaaggattccaataatggaaactttgttttggaaatacaagtctttacttatttcttagcaataattacac 44765345  T
Q  408 tatttttcgatgcaaagttactcattttagtactttaa 445  Q
     | ||||| ||||||| ||||| |||||| ||||||||    
T  44765346 cacttttcaatgcaaacttacttattttaatactttaa 44765383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 42673265 - 42673352
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  42673265 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaa 42673352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 48159982 - 48159899
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  48159982 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 48159899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 53687973 - 53687890
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  53687973 atagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 53687890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 309 - 475
Target Start/End: Original strand, 32375193 - 32375361
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt--acttttttcttagcaataattaca 406  Q
    ||||||||||||| |||||| ||||| ||||| |||| || |||| | || |||||||||||||| ||||| ||    ||||||||||||||||||||||    
T  32375193 ttgctaaccagtgccctaagggcaatggttaaggattccattaataagaattttgtcttgaaaattcaagtatttattttttttcttagcaataattaca 32375292  T
Q  407 ctatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattc 475  Q
    | | ||||| |||| || ||||| ||||||||||||||||||||||| |||| || || ||||| ||||    
T  32375293 ccacttttcaatgctaacttacttattttagtactttaactaatgccccaagagcaatggttagtattc 32375361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 10348768 - 10348856
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||| | |||||||||||||||||| ||||    
T  10348768 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagccaaa 10348856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 48160302 - 48160390
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||  |||||||||||||| ||||    
T  48160302 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagccaaa 48160390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 22429565 - 22429651
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaa 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||  ||||||||||||||||||    
T  22429565 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggagg-gaaagtgcaattaagtcaa 22429651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 44008052 - 44007959
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaactttt 107  Q
    ||||||||||||||||||||||| |||||||  | |||||| |||||||||||| ||||||||||| | ||||||||||||||| |||||||||    
T  44008052 atagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagccaaactttt 44007959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 305 - 480
Target Start/End: Complemental strand, 47510891 - 47510715
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttactttttt-cttagcaataatt 403  Q
    ||||||||||||||||| |||||  |||||  || | |||| || ||||  ||||| ||||||| |||||||| ||||  |||||| |||| ||||||||    
T  47510891 ggtcttgctaaccagtgccctaaaggcaatgattgatgattccattaatagaaactatgtcttggaaatacaaatctttgtttttttcttaacaataatt 47510792  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctt 480  Q
    |||| |||||||||| |||| ||||| |||||||||||||||  |||||| ||| ||  || |||||||||||||||    
T  47510791 acaccatttttcgatacaaacttacttattttagtactttaatcaatgccccaaaggtaatggttagcattctcctt 47510715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 53688272 - 53688359
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||  |||||||| ||||| |||||||||||||| ||||    
T  53688272 atagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactata-ggggagaaagtgcaattaagccaaa 53688359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 26007266 - 26007184
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  26007266 atagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaag 26007184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 40848605 - 40848523
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||  ||||||||||||| |||||||||||||||    
T  40848605 atagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaag 40848523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 40848930 - 40849013
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||||||  ||||||||| ||| |||||||||||||||    
T  40848930 atagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaag 40849013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 42673062 - 42672980
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  42673062 atagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaag 42672980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 3353202 - 3353125
Alignment:
Q  24 aaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  3353202 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaa 3353125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 27238869 - 27238951
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||| ||| ||||||||||||||    
T  27238869 atagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 478
Target Start/End: Original strand, 4195301 - 4195473
Alignment:
Q  307 tcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-actttt-ttcttagcaataatta 404  Q
    ||||||||||||||| | |||| ||||| ||||| |||| || ||||   || ||||| ||| |||||||| |||| |||||| |||||||||| |||||    
T  4195301 tcttgctaaccagtgccttaagggcaatggttaaggattccattaatagtaattttgttttggaaatacaattctttacttttcttcttagcaa-aatta 4195399  T
Q  405 cactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcc 478  Q
    ||| ||||||  ||||||| ||||| |||||||||||||||| |||||| |||| || || |||||||||||||    
T  4195400 caccatttttttatgcaaacttacttattttagtactttaaccaatgccccaagagcaatggttagcattctcc 4195473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 24485429 - 24485516
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||  ||||||||||| | ||||||||||||||| ||||    
T  24485429 atagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactatagggag-aaaagtgcaattaagccaaa 24485516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 3353520 - 3353591
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaa 85  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||  |||||||||||||||||    
T  3353520 atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaa 3353591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 458
Target Start/End: Complemental strand, 3432749 - 3432602
Alignment:
Q  312 ctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactat 410  Q
    |||| ||||||| ||||  |||| ||||| |||| || ||||  ||||||| ||||||||||| |||| || ||||| ||||||||||||||||||  ||    
T  3432749 ctaagcagtgtcttaaggacaatggttaatgattccattaatagaaactttatcttgaaaatataagtgtttactttgttcttagcaataattacatcat 3432650  T
Q  411 ttttcgatgcaaagttactcattttagtactttaactaatgcctcaag 458  Q
    |||| |||||||| ||| | |||||||||||||||| ||| |||||||    
T  3432649 tttttgatgcaaacttatttattttagtactttaaccaatacctcaag 3432602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 27238550 - 27238467
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||  |||||||||| || |||||| ||||||||    
T  27238550 atagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaag 27238467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 47665996 - 47665913
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||| || |||||| |||||||||||| ||| |||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  47665996 ataggtggtaaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaag 47665913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 26007588 - 26007670
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||| ||||  ||||||||| | |||||||  ||||||||||||||||||||||||||||    
T  26007588 atagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaa 26007670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 42456164 - 42456250
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||   |||| |||||||  |||||||||||||| ||||    
T  42456164 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggggaactttaggggg--aaagtgcaattaagccaaa 42456250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 24485106 - 24485034
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaa 86  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||  |||||||||| |||||||    
T  24485106 atagggggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaa 24485034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 36180639 - 36180558
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||  ||| |||||||||||    
T  36180639 ataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagggg--aaatgtgcaattaag 36180558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 10348564 - 10348481
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||| ||| |||||| |||||||||| |||||||| |||||||| |||  |||||||||||||||    
T  10348564 ataggggacaaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaag 10348481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 36180959 - 36181042
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||  |||||||||||||| |||||||||||| |||||| |||||||| | ||||||||||| | |||||||||||||||    
T  36180959 ataggggaaaaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaag 36181042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 42005474 - 42005344
Alignment:
Q  324 ctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaa 422  Q
    ||||| ||||| ||||| |||| || ||||  ||| ||| | |||||||||||| |||| |||||||||||| ||||||||| || |||||| |||||||    
T  42005474 ctaagggcaatggttaaggattccattaatagaaattttatattgaaaatacaaatctttacttttttcttaacaataattagaccatttttagatgcaa 42005375  T
Q  423 agttactcattttagtactttaactaatgcc 453  Q
    | ||||| ||| |||||||||||| ||||||    
T  42005374 acttacttattgtagtactttaaccaatgcc 42005344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 44008370 - 44008457
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||| ||||| |||||||| |||||||| ||||||||||||||||||||  ||||||||||  | ||||||||||||||| ||||    
T  44008370 atagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatg-aaaagtgcaattaagccaaa 44008457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 22429243 - 22429160
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||| ||||||| ||||||||| | |||||||||  ||| ||||||||  |||||||||||||||    
T  22429243 ataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaag 22429160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 21896487 - 21896562
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||| | |||| |||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||||    
T  21896487 gcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatata-ggggaaaaaatgcaattaag 21896562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 8314098 - 8314015
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||| |||||||||| ||||| |||  || ||||||||||| |||||||||| ||| ||||||||  |||||||||||||||    
T  8314098 atagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaag 8314015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 42455851 - 42455792
Alignment:
Q  38 aaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||| ||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  42455851 aaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 42455792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 53766572 - 53766631
Alignment:
Q  38 aaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||||||||   ||||||||||||| |||||||||||||||    
T  53766572 aaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaag 53766631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 460
Target Start/End: Original strand, 51312857 - 51313015
Alignment:
Q  303 aaggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaag-tcttacttttttcttagcaataa 401  Q
    |||||||||||||| ||||||||||| ||||||||||| || | || ||||  ||| ||| ||||||||||| ||| | ||| |||| |||| | |||||    
T  51312857 aaggtcttgctaactagtgtcctaagggcaatagttaaggaatccactaatataaattttatcttgaaaatataagcttttatttttgtcttggtaataa 51312956  T
Q  402 ttacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaaggg 460  Q
    | | || | |||| |||||||| ||||| ||||||  || ||||| ||||| |||||||    
T  51312957 tcataccactttttgatgcaaacttactaattttaacacattaaccaatgcttcaaggg 51313015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 439
Target Start/End: Original strand, 25118636 - 25118694
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagta 439  Q
    ||||||||||||||||||| ||||||| | ||||| ||||||| ||||| |||||||||    
T  25118636 ttacttttttcttagcaatgattacaccacttttcaatgcaaacttacttattttagta 25118694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 478
Target Start/End: Original strand, 20137620 - 20137715
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcc 478  Q
    |||||||| ||||  |||||||||| | |||||| | |||||||||||| ||||||||||| |||| |||| | |||||||  |||||||||||||||    
T  20137620 ttacttttgtcttgacaataattac-caattttt-gttgcaaagttacttattttagtactctaaccaatgtcccaagggcactagttagcattctcc 20137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 20969019 - 20969079
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaactt 105  Q
    |||||||||||| |||||||||  |||  |||||||| ||||||||||||||| |||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccaaactt 20969079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 9248464 - 9248375
Alignment:
Q  385 ttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcatt 474  Q
    |||||||||| |||| |||| || | ||||||||||||| ||| | |||||| ||||||||| |||||| ||| ||  || |||||||||    
T  9248464 ttttttcttatcaatgattataccacttttcgatgcaaacttatttattttaatactttaaccaatgccccaaaggtaatggttagcatt 9248375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 10293909 - 10293966
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||| |||||||| | |||  |||||||| ||||||||||||||| ||||    
T  10293909 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaa 10293966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 478
Target Start/End: Complemental strand, 23278105 - 23278010
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcc 478  Q
    |||||||| ||||  |||||||||| | |||||| | |||||||||  | ||||||||||| |||| |||| |||||||||  |||||||||||||||    
T  23278105 ttacttttgtcttgacaataattac-caattttt-gttgcaaagttgtttattttagtactctaaccaatgtctcaagggcactagttagcattctcc 23278010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 1928403 - 1928455
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattg 66  Q
    |||||| |||||| | ||||||| ||| ||||||||||||||| |||||||||    
T  1928403 atagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcacaattg 1928455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 10293662 - 10293610
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||| |||  ||||||| ||||| ||||||||||    
T  10293662 ggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaag 10293610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 336 - 478
Target Start/End: Original strand, 246513 - 246656
Alignment:
Q  336 gttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattt 434  Q
    ||||||||||  | |||| |||| |||||||||||||||||||| || |||||||||| |||||||||||||| | ||||||||||||| ||||| ||||    
T  246513 gttaaagattctactaataaaaaatttgtcttgaaaatacaagtttttacttttttctgagcaataattacaccacttttcgatgcaaacttacttattt 246612  T
Q  435 tagtactttaactaatgcctcaagggctatagttagcattctcc 478  Q
    |||||||||||||||||||  |||||| || |||||||||||||    
T  246613 tagtactttaactaatgccctaagggcaatggttagcattctcc 246656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 8e-35; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 355 - 481
Target Start/End: Original strand, 8772419 - 8772546
Alignment:
Q  355 aaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcc 453  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||||||| | ||||||||||||| ||||| |||||||||||||||| ||||||    
T  8772419 aaaactttgtcttgaaaatacaagtctttacttttgtcttggcaataattacaccacttttcgatgcaaatttacttattttagtactttaaccaatgcc 8772518  T
Q  454 tcaagggctatagttagcattctccttt 481  Q
     ||||||| || ||||||||||| ||||    
T  8772519 ccaagggcaatggttagcattcttcttt 8772546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 26815088 - 26815171
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  26815088 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaag 26815171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 305 - 461
Target Start/End: Complemental strand, 12188779 - 12188622
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    |||||||||||  |||| |||||||||||| ||||| |||| || ||||  ||||||||||||| |||||||| | || |||||||||||||||||||||    
T  12188779 ggtcttgctaattagtgccctaagagcaatcgttaaggattccattaatagaaactttgtcttggaaatacaaatttttacttttttcttagcaataatt 12188680  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggc 461  Q
    |||| ||||||| || |||| ||||| |||||||||||||| | |||||| |||||||    
T  12188679 acaccatttttcaatacaaaattacttattttagtactttatccaatgccccaagggc 12188622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 21687110 - 21687021
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaac 103  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||    
T  21687110 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagccaaac 21687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 484
Target Start/End: Original strand, 26701492 - 26701677
Alignment:
Q  300 ttaaaggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaa 398  Q
    |||| |||||||||||||| ||||||||| ||||| |||||| || ||| ||||  ||||||| |||||||||||||| |||| |||||||||||| |||    
T  26701492 ttaagggtcttgctaaccattgtcctaagggcaatggttaaaaatctcattaatagaaactttctcttgaaaatacaaatctttacttttttcttatcaa 26701591  T
Q  399 taattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctttttt 484  Q
    | ||||||  | ||||||||||||| ||||| |||| ||||||||||| |||| | ||| | | || |||| ||||||||||||||    
T  26701592 tcattacatcacttttcgatgcaaacttacttatttaagtactttaaccaatgtcacaatgacaatggttaacattctcctttttt 26701677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 50526441 - 50526525
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagt 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  50526441 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagt 50526525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 46824247 - 46824330
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  46824247 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaag 46824330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 9347211 - 9347123
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  9347211 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 9347123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 13918531 - 13918443
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||| |||||||||||||||||| ||||    
T  13918531 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagccaaa 13918443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 26814779 - 26814691
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||    
T  26814779 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaa 26814691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 4692402 - 4692485
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  4692402 ataggaggtaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaag 4692485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 6703545 - 6703462
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  6703545 atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaag 6703462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 20480252 - 20480170
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  20480252 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaag 20480170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 20371121 - 20371042
Alignment:
Q  16 agggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  20371121 agggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaag 20371042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 28634126 - 28634208
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  28634126 atagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 48104763 - 48104681
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  48104763 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 50430050 - 50430132
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  50430050 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 27172200 - 27172113
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  27172200 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 27172113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 48105085 - 48105173
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||| |||| ||||||||||||||| ||||    
T  48105085 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagccaaa 48105173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 50615590 - 50615677
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  50615590 atagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaa 50615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 50623418 - 50623505
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  50623418 atagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaagccaaa 50623505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 9347520 - 9347602
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  9347520 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggg-gaaagtgcaattaag 9347602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 19008719 - 19008802
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  19008719 atagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaag 19008802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 32163016 - 32163095
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  32163016 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 32163095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 999196 - 999115
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||||||    
T  999196 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggg-aaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 44911406 - 44911488
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||||||  |||||||||||||||||| |||||||||    
T  44911406 atagggggcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaa 44911488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 46823928 - 46823846
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  46823928 atagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 6703869 - 6703946
Alignment:
Q  20 ggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||  |||||||||||||||    
T  6703869 ggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaag 6703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 49318135 - 49318222
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||||||  |||||||||||||| ||||    
T  49318135 atagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggg-gaaagtgcaattaagccaaa 49318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 49318412 - 49318499
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||  |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||| ||||    
T  49318412 ataggggataaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagggggaaaaa-tgcaattaagccaaa 49318499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 28633805 - 28633722
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||  |||||||| |||| |||||||||||||||    
T  28633805 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaag 28633722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 44911110 - 44911027
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||| |||||||||  ||||||||||||||    
T  44911110 atagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaag 44911027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 49317836 - 49317754
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  49317836 atagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaag 49317754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 305 - 474
Target Start/End: Original strand, 2193237 - 2193407
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatt 403  Q
    ||||||| ||| || || ||||||| |||||||||| ||||  | ||||  ||||||| ||||||||||| || |||| |||||||||||| |||| |||    
T  2193237 ggtcttgttaatcaatgccctaagaacaatagttaaggattctattaatagaaactttatcttgaaaatataaatctttacttttttcttatcaatgatt 2193336  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcatt 474  Q
    |||| | ||||||||| ||| ||||| |||||| ||||||||| |||||| ||||||| || |||| ||||    
T  2193337 acaccacttttcgatgtaaatttacttattttaatactttaaccaatgccacaagggcaatggttaacatt 2193407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 42611583 - 42611665
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||||| |||| |||||||| |||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  42611583 atagggggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 305 - 445
Target Start/End: Complemental strand, 44603773 - 44603632
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| ||||| ||||| |||  || ||||  |||||||||||||||| ||||| || ||| ||||||||||||||| |||    
T  44603773 ggtcttgctaaccagtgccctaagggcaatggttaaggatcccattaatataaactttgtcttgaaagtacaaatctttatttttttcttagcaatcatt 44603674  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaa 445  Q
    |||| | |||| || ||||| ||||| |||| ||||||||||    
T  44603673 acaccactttttgaggcaaacttacttatttaagtactttaa 44603632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 50949534 - 50949615
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaatta 95  Q
    |||||||||||||||||||||||||||| ||| | |||||||| |||||||||| |||||||||||||  ||||||||||||    
T  50949534 atagggggcaaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaatta 50949615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 999494 - 999576
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||  || |||||||||| |||||||||||||||    
T  999494 atagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctataggggg-aaaagtgcaattaag 999576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13918836 - 13918919
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||||| |||||||| |||||||||| |||||||||  ||||||||||| | |||||||||||||||    
T  13918836 atagggggcaaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaag 13918919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 42611270 - 42611188
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||| ||||||||||||||||| |||||||| |||||||||| |||||||||  |||||||| |||| ||||||||||||||    
T  42611270 ataggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 20371321 - 20371409
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatgggg-tgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  20371321 atagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 20371409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 47498384 - 47498298
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||| ||||||||||||| |||| |||||||||| ||||||||||||||||||  |||||||||||||  |||||||||||||| ||||    
T  47498384 atagagggcaaaatcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaactataggggg--aaagtgcaattaagccaaa 47498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 20480591 - 20480668
Alignment:
Q  24 aaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 20480668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 305 - 452
Target Start/End: Original strand, 4448978 - 4449127
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaacttt-gtcttgaaaatacaagtcttactttttt-cttagcaataat 402  Q
    |||||||||||||| ||||||||| ||||| ||||| |||| || |||   ||||||| |||||  |||||||||| ||| |||||| |||| |||||||    
T  4448978 ggtcttgctaaccaatgtcctaagggcaatggttaaggattccattaacagaaacttttgtcttagaaatacaagttttaatttttttcttaacaataat 4449077  T
Q  403 tacactatttttcgatgcaaagttactcattttagtactttaactaatgc 452  Q
    ||||| ||||||| || ||||  || | |||||||||||||||| |||||    
T  4449078 tacaccatttttcaatacaaacctatttattttagtactttaaccaatgc 4449127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 355 - 444
Target Start/End: Complemental strand, 15330940 - 15330851
Alignment:
Q  355 aaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtacttta 444  Q
    |||||||||||  |||||||||| ||||   |||||||||||||||||||||| ||||||||||||||| || || |||||| |||||||    
T  15330940 aaaactttgtcacgaaaatacaaatctttactttttcttagcaataattacacaatttttcgatgcaaactttcttattttaatacttta 15330851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 32162799 - 32162734
Alignment:
Q  29 gctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaatt 94  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  32162799 gctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaagaaaaagtgcaatt 32162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 27172514 - 27172593
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| |||| ||||| |||||||| |||||||||  ||| || |||||| |||||||||||||||    
T  27172514 ggggcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaag 27172593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 39691969 - 39692052
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||| |||||||| | ||||| |||  |||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||    
T  39691969 atagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaag 39692052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 318 - 487
Target Start/End: Complemental strand, 42724065 - 42723893
Alignment:
Q  318 agtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtct---tactttttt-cttagcaataattacactatttt 413  Q
    |||||| |||| ||||| ||||| |||| || ||||  ||||||||||||  ||||||| ||||   ||||||||| |||| ||||||||||| | ||||    
T  42724065 agtgtcttaagggcaatggttaaggattccattaatagaaactttgtctttgaaatacacgtctctttactttttttcttaacaataattaca-tctttt 42723967  T
Q  414 tcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctccttttttaaa 487  Q
    | | |||||| ||| | ||||||||| |||||| |||||  ||||||| ||  ||| |||||||||||||||||    
T  42723966 ttggtgcaaacttatttattttagtaatttaaccaatgctccaagggcaatgattaacattctccttttttaaa 42723893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 50429741 - 50429690
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaatt 65  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  50429741 atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaatt 50429690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 44224088 - 44224169
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||  |||||||| ||||||| | ||||  |||||||||||||    
T  44224088 ataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcacacaattggtaaactacatgggg-caaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 6002315 - 6002234
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| |||  ||||||||||||||  ||||||||| |||  |||||||  ||||||||||||||| ||||    
T  6002315 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagccaaa 6002234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 50949237 - 50949164
Alignment:
Q  23 aaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||  | |||||||| || |||||| |||||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaa 50949164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 17518602 - 17518665
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaacttttat 109  Q
    |||||||||||| |||||||||  |||  |||||||||||| |||||||||||||||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaa-gtgcaattaagtcaaacttttat 17518665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 49284487 - 49284411
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  49284487 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 49284411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 1176890 - 1176839
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| |||  |||||||| ||||||||||||||    
T  1176890 ggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 4692106 - 4692024
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||| |||||||||||||||| || |||||||| | ||||||   |||||||| | ||| ||||||||||||||    
T  4692106 atagggggcaaaatggctcgttttaaactataggatgcaaaatcgtacaattagcaaactata-gaggagaaagtgcaattaag 4692024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 451
Target Start/End: Complemental strand, 7330636 - 7330541
Alignment:
Q  357 aactttgtcttgaaaatacaagtctta-cttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatg 451  Q
    |||||| |||||||||||||||| ||  |||||||||||||||||||| ||  | ||||| |||||   ||||| |||||||||||||||| ||||    
T  7330636 aactttatcttgaaaatacaagtatttgcttttttcttagcaataattgcatcacttttcaatgcatgcttacttattttagtactttaaccaatg 7330541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 50615289 - 50615242
Alignment:
Q  50 gcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 50615242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 50623117 - 50623070
Alignment:
Q  50 gcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 50623070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 21687445 - 21687507
Alignment:
Q  23 aaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaa 85  Q
    |||||||||||||| |||||||| ||| |||||| |||||||||  ||| |||||||||||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagggggaaaa 21687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 47498493 - 47498546
Alignment:
Q  43 atggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||  |||||||||| ||||||||||||| |||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactataggggg-aaaagtgcaattaag 47498546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 6002870 - 6002947
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagt 98  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  ||||||   ||||||||||||||||    
T  6002870 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaagt 6002947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 47955608 - 47955660
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| |||||  |||||||| |||||||||||||||    
T  47955608 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaag 47955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 423
Target Start/End: Complemental strand, 3895688 - 3895573
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacac 407  Q
    ||||||||| |||| |||| |||||| |||||  |||||| ||||  ||| ||| |||| |||||| ||| ||| | |||||||||| |||| |||| ||    
T  3895688 ttgctaaccggtgttctaaaagcaattgttaagaatttcattaatagaaattttatcttaaaaatataagactttatttttttcttatcaatgattatac 3895589  T
Q  408 tatttttcgatgcaaa 423  Q
     |||||||||||||||    
T  3895588 gatttttcgatgcaaa 3895573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 8108991 - 8109045
Alignment:
Q  43 atggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  8108991 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 8109045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 47955360 - 47955308
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 47955308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 7664333 - 7664250
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  7664333 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaag 7664250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 356 - 484
Target Start/End: Original strand, 31915065 - 31915194
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcct 454  Q
    ||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| | ||||||||||||| ||||| |||||| ||||||||| ||||||     
T  31915065 aaactttgtcttgaaaatacaagtctttacttttttcatagaaataattacaccacttttcgatgcaaacttacttattttaatactttaaccaatgccc 31915164  T
Q  455 caagggctatagttagcattctcctttttt 484  Q
    ||||| | || |||| ||||||||||||||    
T  31915165 caaggacaatggttaccattctcctttttt 31915194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 8851551 - 8851634
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  8851551 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 8851634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 337 - 475
Target Start/End: Original strand, 8033273 - 8033410
Alignment:
Q  337 ttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcatttta 436  Q
    |||| ||||||| ||||  ||||||| |||||||||||||||| |||||||||| ||| |||||||||||| | ||||||||||||| ||||| ||||||    
T  8033273 ttaaggatttcattaatagaaactttatcttgaaaatacaagttttactttttt-ttatcaataattacaccacttttcgatgcaaatttacttatttta 8033371  T
Q  437 gtactttaactaatgcctcaagggctatagttagcattc 475  Q
     ||||||||| |||||| ||||||| || ||||||||||    
T  8033372 atactttaaccaatgccccaagggcaatggttagcattc 8033410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 7664642 - 7664730
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||    
T  7664642 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaa 7664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 5379928 - 5380011
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  5379928 atagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaag 5380011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 8851233 - 8851151
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  8851233 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 26692481 - 26692399
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  26692481 atagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 305 - 479
Target Start/End: Complemental strand, 31921380 - 31921207
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttttcttagcaataatta 404  Q
    |||||||||||||| |||| |||| | ||| ||||| |||  || ||||  |||||||||||||||||||||||| ||  ||||||||||||||| ||||    
T  31921380 ggtcttgctaaccattgtcataag-gtaatggttaatgatcccattaatagaaactttgtcttgaaaatacaagtatttattttttcttagcaatcatta 31921282  T
Q  405 cactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcct 479  Q
    ||| | ||||||| ||||| ||||| |||| ||||||||||| ||||||  |||||| || |||| |||||||||    
T  31921281 caccacttttcgaggcaaacttacttatttaagtactttaaccaatgccctaagggcaatggttaacattctcct 31921207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 41790575 - 41790494
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
T  41790575 atagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagggggaaaaa-tgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 5378746 - 5378663
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  5378746 atagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 5378663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 37720285 - 37720206
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||    
T  37720285 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 37720206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 26692789 - 26692871
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||| ||| ||||||||||||||    
T  26692789 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18750097 - 18750177
Alignment:
Q  16 agggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||    
T  18750097 agggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggg-agaagtgcaattaag 18750177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 19141528 - 19141444
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtc 99  Q
    |||||||| ||| |||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  19141528 atagggggtaaattcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaagtc 19141444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 17851062 - 17850975
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  17851062 atagggggcaaaatcgctcgtta-aaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 17850975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 19141818 - 19141898
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||||||  |||||||||||||    
T  19141818 atagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 41790881 - 41790964
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||||  ||| ||||||||| |||||||||||||||    
T  41790881 atagggggcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaag 41790964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 6325316 - 6325401
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtc 99  Q
    ||||||||||||||||||||||| | |||||| |||||||||| |||||||||  |||||||| |||| |||||||||||||||||    
T  6325316 atagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagtc 6325401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 16910912 - 16910829
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||  |||||| | |||| |||||||||||||||    
T  16910912 atagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaag 16910829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 35005288 - 35005209
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaaggg 460  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||||| |||||||||||||||| |||||| ||||||    
T  35005288 ttacttttttcttagcaatgattacaccacttttcgatgcaaacttacttattttagtactttaaccaatgccccaaggg 35005209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 6325002 - 6324924
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaa 92  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| |||||||||  ||||||||||||| ||||||||||    
T  6325002 ataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 12800876 - 12800775
Alignment:
Q  356 aaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctc 455  Q
    ||||||||||||||||||| || | |||||||||||||| ||||||||| || | |||||||| |||| ||||| || ||| ||||||||| ||||||||    
T  12800876 aaactttgtcttgaaaatataaattttacttttttcttaacaataattagaccaattttcgatacaaatttacttatcttaatactttaaccaatgcctc 12800777  T
Q  456 aa 457  Q
    ||    
T  12800776 aa 12800775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 38373355 - 38373452
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgc 452  Q
    ||||||| ||||| |||||||||| || |||||| |||||||||||||||||| ||||||||||||||| ||||| |||||| || |||||| |||||    
T  38373355 aaactttatcttggaaatacaagtttttacttttatcttagcaataattacaccatttttcgatgcaaatttacttattttaatattttaaccaatgc 38373452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 7979650 - 7979573
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaat 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||| |||  |||||||||||    
T  7979650 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactataaggg--aaaagtgcaat 7979573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 16911238 - 16911320
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||  |||||||| ||||  ||||||||||||||    
T  16911238 ataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-ggggcgaaagtgcaattaag 16911320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 17851371 - 17851454
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||  ||||||||   | ||||||||||||||||    
T  17851371 atagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataaaagaaaaaagtgcaattaag 17851454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 5793532 - 5793450
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| ||||||| || |||||||| |||||||||  |||||| | |||| ||||||||||||||    
T  5793532 atagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 7979972 - 7980054
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||   |||||||| | ||||||||||||||||||    
T  7979972 ataggcggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactata-gaggaaaaagtgcaattaag 7980054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 459
Target Start/End: Original strand, 31598006 - 31598162
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-actttttt--cttagcaataa 401  Q
    ||||||||||| || |  ||||||  |||||||||| |||| || ||||  ||||||||||||| |||| ||| |||| ||||||||  |||||||||||    
T  31598006 ggtcttgctaatcaataccctaaggacaatagttaaggattccattaatagaaactttgtcttggaaattcaaatctttacttttttttcttagcaataa 31598105  T
Q  402 ttacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagg 459  Q
    ||| || | ||| ||||||||| ||||| ||||||||| |||||| |||| |||||||    
T  31598106 ttataccacttt-cgatgcaaacttacttattttagtattttaaccaatgtctcaagg 31598162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 309 - 452
Target Start/End: Original strand, 16209790 - 16209934
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacac 407  Q
    ||||||| ||||||| |||| ||||| |||||  | | ||||| |  ||||||||| ||| |||||||||| || |||||| ||||||||||| ||||||    
T  16209790 ttgctaatcagtgtcttaagggcaatggttaagaaatccaatagtagaaactttgttttggaaatacaagtgtttacttttgtcttagcaatagttacac 16209889  T
Q  408 tatttttcgatgcaaagttactcattttagtactttaactaatgc 452  Q
     | |||| | |  ||||||||| |||||||||||||||| |||||    
T  16209890 aactttttgttttaaagttacttattttagtactttaaccaatgc 16209934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 26842214 - 26842303
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaacttttatg 110  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  ||||||||| ||||| ||||| ||||||    
T  26842214 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagccaaacgtttatg 26842303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 2638898 - 2638822
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||  |||  |||||||  |||| ||||||||||    
T  2638898 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 2638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 2639458 - 2639534
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  2639458 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 2639534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 26841665 - 26841589
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  26841665 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 26841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 38490817 - 38490892
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||| ||| | |||||||| ||||||||| |||||||||||| |  ||||||||||||||    
T  38490817 gcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggag-gaaagtgcaattaag 38490892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18749810 - 18749729
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||  |||||| |||||||||||||||||||  || |||||| |||||| | || | ||||||||||||||    
T  18749810 atagggggcaaaatcattcgtttaaaactatggggtgcaaaatcacataattgacaaactaga-ggagtaaaagtgcaattaa 18749729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 459
Target Start/End: Complemental strand, 29140262 - 29140161
Alignment:
Q  360 tttgtcttgaaaatacaagtcttacttttttc-ttagcaataattacacta-tttttcgatgcaaagttactcattttagtactttaactaatgcctcaa 457  Q
    |||||| ||||||||||||| ||  ||||||| |||||||||||||||| | ||||| | | |||| ||||| |||||||||||||||| |||  |||||    
T  29140262 tttgtcctgaaaatacaagtttttattttttccttagcaataattacacaatttttttgtttcaaaattacttattttagtactttaaccaatatctcaa 29140163  T
Q  458 gg 459  Q
    ||    
T  29140162 gg 29140161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 30191225 - 30191282
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||| |||||||| |||||  |||||||| ||||||||||||||| ||||    
T  30191225 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccaaa 30191282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 18296154 - 18296078
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||| ||||||||    
T  18296154 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaag 18296078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 480
Target Start/End: Original strand, 37519733 - 37519827
Alignment:
Q  387 ttttcttagcaataattacactatttttcgatgcaaagtt--actcattttagtactttaactaatgcctcaagggctatagttagcattctcctt 480  Q
    |||||||| ||||||||| || ||||||  ||||||| ||  ||| |||||| ||||||||| |||| ||||||||| || |||||||||||||||    
T  37519733 ttttcttaacaataattaaaccatttttt-atgcaaacttttacttattttaatactttaaccaatgactcaagggcaatggttagcattctcctt 37519827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 7591279 - 7591204
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||| |||||||    
T  7591279 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 13832269 - 13832202
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaacta 448  Q
    |||||||| ||||||||||||| ||||  | ||| |||||||| ||||| ||||||| ||||||||||    
T  13832269 ttacttttgtcttagcaataatcacacagtcttttgatgcaaaattacttattttagaactttaacta 13832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 14845964 - 14846019
Alignment:
Q  425 ttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctt 480  Q
    ||||| |||||| ||||||||| |||| ||||||||| || |||||||||||||||    
T  14845964 ttacttattttaatactttaaccaatgactcaagggcaatggttagcattctcctt 14846019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 399
Target Start/End: Original strand, 37519639 - 37519733
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaat 399  Q
    |||||||||||| |||| ||||||  |||| ||||| |||| || ||||  ||||||||||||| ||||||||||| |||| ||||||||| ||||    
T  37519639 ggtcttgctaactagtgccctaaggacaatggttaaggattccattaatataaactttgtcttg-aaatacaagtctttacctttttcttaacaat 37519733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 2396688 - 2396798
Alignment:
Q  337 ttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcatttt 435  Q
    |||| |||| || |||| |||||||||||||| | ||| || |||| |||||||||||  |||| ||||||| | ||||  || |||| ||||| |||||    
T  2396688 ttaaggattccattaataaaaactttgtcttggagatataaatctttacttttttcttgacaatgattacaccactttttaatacaaaattacttatttt 2396787  T
Q  436 agtactttaac 446  Q
    |||||||||||    
T  2396788 agtactttaac 2396798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 300 - 334
Target Start/End: Original strand, 5525249 - 5525283
Alignment:
Q  300 ttaaaggtcttgctaaccagtgtcctaagagcaat 334  Q
    ||||||||||||| |||||||||||||||||||||    
T  5525249 ttaaaggtcttgccaaccagtgtcctaagagcaat 5525283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 7591826 - 7591872
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattga 67  Q
    |||||||||||||||| |||  |||||||||||||| ||||||||||    
T  7591826 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattga 7591872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 450
Target Start/End: Original strand, 4818779 - 4818847
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaat 450  Q
    |||||||| |||||  ||||||||||| ||||||   | |||||||||| ||||||||||||||||||||    
T  4818779 ttacttttatcttaataataattacacaatttttattt-caaagttacttattttagtactttaactaat 4818847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 18055314 - 18055367
Alignment:
Q  43 atggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||| |||||||||| |||   ||| ||||||||||||||||||    
T  18055314 atggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 20347464 - 20347516
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 20347516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 30190977 - 30190925
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 30190925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 34498207 - 34498125
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  34498207 atagggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 474
Target Start/End: Complemental strand, 27982455 - 27982289
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| |||||  |||| |||| || ||||  ||||||||||||| ||||||||||| ||||||||||||||| ||| |||    
T  27982455 ggtcttgctaaccagtgccctaagggcaatgattaaggattccattaatagaaactttgtcttggaaatacaagtctttacttttttcttagtaatgatt 27982356  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcatt 474  Q
    |||| | |||||    |||| ||||| |||||||||||||||| |||||| ||||||| || |||| ||||    
T  27982355 acaccacttttc----caaacttacttattttagtactttaaccaatgccccaagggcaatggttaacatt 27982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 305 - 474
Target Start/End: Complemental strand, 28039757 - 28039591
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataatt 403  Q
    ||||||||||||||||| |||||| |||||  |||| |||| || ||||  ||||||||||||| ||||||||||| ||||||||||||||| ||| |||    
T  28039757 ggtcttgctaaccagtgccctaagggcaatgattaaggattccattaatagaaactttgtcttggaaatacaagtctttacttttttcttagtaatgatt 28039658  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcatt 474  Q
    |||| | |||||    |||| ||||| |||||||||||||||| |||||| ||||||| || |||| ||||    
T  28039657 acaccacttttc----caaacttacttattttagtactttaaccaatgccccaagggcaatggttaacatt 28039591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 37396793 - 37396710
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |  ||||||||||||| |||||||||||||||    
T  37396793 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaag 37396710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15444616 - 15444698
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||  |||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  15444616 ataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaa 15444698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 25439095 - 25439176
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  25439095 atagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 16169576 - 16169669
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaactttt 107  Q
    ||||||||||||||||||||||| |||||||  | |||||| |||||||||||| ||||||||||| | ||||||||||||||| |||||||||    
T  16169576 atagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagccaaactttt 16169669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 9623587 - 9623499
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||||||  ||||||||| | ||||||||||||||||| ||||    
T  9623587 atagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagccaaa 9623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 309 - 480
Target Start/End: Complemental strand, 12956384 - 12956216
Alignment:
Q  309 ttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacact 408  Q
    ||||||||||||||| ||||||||||  |||| |||| || |||| |||||| |||  || |||||||| ||||  ||||||||||||||| |||||||     
T  12956384 ttgctaaccagtgtc-taagagcaatgattaaggattccattaataaaaactatgt--tggaaatacaattctttattttttcttagcaatgattacacc 12956288  T
Q  409 atttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctt 480  Q
    | ||||||||||||| ||||| | |||||||||||||| |||||| |||| |  || |||| ||||||||||    
T  12956287 aattttcgatgcaaacttacttactttagtactttaaccaatgccccaagagtaatggttaacattctcctt 12956216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 482
Target Start/End: Complemental strand, 22488945 - 22488762
Alignment:
Q  306 gtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaataatta 404  Q
    |||||||||||||||| |||||| | ||| ||||| |||| || ||||  ||||||||| ||| |||||||||| || |||||||||||||||||| |||    
T  22488945 gtcttgctaaccagtgccctaagggtaatggttaaggattccattaatagaaactttgttttggaaatacaagttttcacttttttcttagcaatagtta 22488846  T
Q  405 ------cactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctttt 482  Q
          | | | ||||||||| ||| ||||| |||| ||||||||||| |||||| ||||||| || |||||||||||||||||    
T  22488845 ccccacccccacttttcgatgtaaacttacttatttaagtactttaaccaatgccccaagggcaatggttagcattctcctttt 22488762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 24473428 - 24473340
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||  ||||||||  ||||||||||||||||||||||||||||| ||||    
T  24473428 atagggggcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagccaaa 24473340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 37397114 - 37397202
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||| |||||||||| ||||||||||| ||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  37397114 atagggggcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 37397202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 17431372 - 17431289
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||| |||| ||||| |||||||||| |||||||| |||| |||||||||||||||    
T  17431372 atagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaag 17431289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 20861607 - 20861690
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||  | |||||||||||||||| ||||||||||    
T  20861607 ataggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaag 20861690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 41662606 - 41662523
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||  |||||||| |||| |||||||||||||||    
T  41662606 atagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 41662523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 304 - 480
Target Start/End: Original strand, 41168595 - 41168773
Alignment:
Q  304 aggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-acttttttcttagcaa-taa 401  Q
    |||| |||||||||||||| ||||    ||| ||||| |||| || |||| ||||| |||||||| ||||||||||||| |||||| ||||||||| |||    
T  41168595 aggtattgctaaccagtgttctaaagataatggttaaggattccattaataaaaacattgtcttggaaatacaagtctttacttttgtcttagcaaataa 41168694  T
Q  402 ttacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctt 480  Q
    |||||  | ||||| ||||||| ||||| ||||||||||||||||||||  |  |||||| || |||| ||||||||||    
T  41168695 ttacatcacttttcaatgcaaacttacttattttagtactttaactaatatcctaagggcaatggttaacattctcctt 41168773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 25438853 - 25438785
Alignment:
Q  38 aaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaacttt 106  Q
    ||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||    
T  25438853 aaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagtcaaacttt 25438785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 6199065 - 6199148
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||  |||||||||||   |||||||||||||||    
T  6199065 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaag 6199148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 24473737 - 24473820
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||   |||||||||||||||    
T  24473737 ataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaag 24473820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 374 - 477
Target Start/End: Original strand, 29374551 - 29374654
Alignment:
Q  374 acaagtcttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcat 473  Q
    |||||||||  ||||||||||||||||||||||| | ||||||||| ||| ||||| |||||| ||||||||| |||| |||||||   || ||||||||    
T  29374551 acaagtctttattttttcttagcaataattacaccacttttcgatgtaaatttacttattttactactttaaccaatgtctcaaggataatggttagcat 29374650  T
Q  474 tctc 477  Q
    ||||    
T  29374651 tctc 29374654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 34498524 - 34498607
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||| |||| || |||| ||||||||||||||||||| ||||||||   ||||||||||||| |||||||||||||||    
T  34498524 atagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaag 34498607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 9822826 - 9822745
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| |||  |||||||||||||| ||||||||||||||  |||||||  ||||||||||||||| ||||    
T  9822826 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagccaaa 9822745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 13936800 - 13936725
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||| ||||  |||||||| |||||||||||||||    
T  13936800 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagataggggg-aaaagtgcaattaag 13936725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 16169258 - 16169171
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||| ||||| |||||||| |||||||| ||||||||||||||||||||  ||||||||||  | ||||||||||||||| ||||    
T  16169258 atagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatg-aaaagtgcaattaagccaaa 16169171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 356 - 435
Target Start/End: Original strand, 44167185 - 44167265
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcatttt 435  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||| ||||||| | ||||||||||||| ||||| |||||    
T  44167185 aaactttgtcttggaaatacaaatctttacttttttcttagcaatgattacacaacttttcgatgcaaacttacttatttt 44167265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 6198743 - 6198660
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||||||  | || ||| |||  |||||||||||||||    
T  6198743 atagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaag 6198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 33726743 - 33726692
Alignment:
Q  50 gcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaa 101  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  33726743 gcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagtcaa 33726692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 2856611 - 2856528
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||  |||||||  ||||||||||||||||||||||||| |||||||||  ||||||||||| | |||| | ||||||||    
T  2856611 ataggggataaaatcgaacgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaag 2856528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 15444296 - 15444213
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||| |||||||||||||||| |||||||||  || ||||||| |||||||  ||||||||| ||| |||| ||||||||||    
T  15444296 atagggagcaaaatcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 381 - 484
Target Start/End: Original strand, 34653333 - 34653435
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcattctcctt 480  Q
    |||||||| |||| ||||||||||||| | |||| |  | || |||||| |||||||||||||||  ||||||||||||||  |||||| ||||||||||    
T  34653333 ttacttttgtctt-gcaataattacacaactttttgtagtaatgttacttattttagtactttaatcaatgcctcaagggcactagttatcattctcctt 34653431  T
Q  481 tttt 484  Q
    ||||    
T  34653432 tttt 34653435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 486
Target Start/End: Complemental strand, 31505620 - 31505495
Alignment:
Q  361 ttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagg 459  Q
    |||||||  |||||| |||||| |||||| ||||| ||||||||||| |||||||  || |||| ||||| |||||| ||||||||| ||||||| || |    
T  31505620 ttgtcttagaaataccagtctttacttttgtcttaacaataattacattattttta-atacaaatttacttattttaatactttaaccaatgccttaaag 31505522  T
Q  460 gctatagttagcattctccttttttaa 486  Q
     | || |||||||||||||||| ||||    
T  31505521 acaattgttagcattctcctttattaa 31505495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 22851468 - 22851387
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||| |||| |||  |||||||||||||| |||||||||| |||  |||||||  ||||||||||||||| ||||    
T  22851468 gcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagccaaa 22851387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 39724024 - 39724105
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  ||||||||||||||| ||||    
T  39724024 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 39724105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 9823337 - 9823413
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  9823337 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 9823413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 13937365 - 13937441
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||| ||||||| |||  |||||||||||| | |||||||||| |||  |||||||| |||||||||||||||    
T  13937365 gcaaaatcactcgtttaaaaacatggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaag 13937441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 479
Target Start/End: Complemental strand, 8488783 - 8488605
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtctt-actttt--ttcttagcaataa 401  Q
    |||||||||||| |||| ||| || ||| ||||||| || |||  |||| |||  ||||||||| |||||||||| || ||||||   ||||||||||||    
T  8488783 ggtcttgctaacgagtgccctgagggcattagttaaggaattccttaataaaatttttgtcttggaaatacaagttttgacttttgactcttagcaataa 8488684  T
Q  402 ttacactatttttcgatgcaaagttac-tcattttagtactttaactaatgcctcaagggctatagttagcattctcct 479  Q
    ||| || | |||| || ||||| |||| | ||||||| |||||||| |||||| |||||||  | ||||||||| ||||    
T  8488683 ttataccactttttgaggcaaacttactttattttagaactttaaccaatgccccaagggcactcgttagcattttcct 8488605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 13027257 - 13027332
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  ||||||||||||||    
T  13027257 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 33727074 - 33727125
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaatt 65  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||||||    
T  33727074 atagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatt 33727125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 3307416 - 3307335
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||| |||| ||| |||||| |||||||| |||||||||| |||  |||||||  |||| |||||||||| ||||    
T  3307416 gcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagccaaa 3307335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 15442848 - 15442763
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtc 99  Q
    |||||| |||||||||| ||||| |||  ||||||||||||||  ||||||||   || ||||||||| |||| ||||||||||||    
T  15442848 atagggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaagtc 15442763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 765788 - 765732
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaa 101  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagtcaa 765732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 13026713 - 13026637
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  ||| |||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  13026713 gcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 13026637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 15156185 - 15156237
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||| |||  |||||||| |||||||||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaag 15156237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 474
Target Start/End: Complemental strand, 3423807 - 3423718
Alignment:
Q  385 ttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcatt 474  Q
    |||| |||||||||||||||||| | |||| | | |||| ||||| ||||||||||||||||  || |||||| | |  |||||||||||    
T  3423807 ttttgtcttagcaataattacacaagttttagttacaaaattacttattttagtactttaaccgatacctcaacgacactagttagcatt 3423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 37752416 - 37752473
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||| |||||||| | |||  |||||||| ||||||||||||||| ||||    
T  37752416 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaa 37752473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 15155937 - 15155885
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  |||||||| |||||||||||||||    
T  15155937 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 15155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 41662403 - 41662455
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  |||||||| |||||||||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 41662455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 43245925 - 43245873
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| ||||||||   |||  ||||||||||||||||||||||||    
T  43245925 ggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaag 43245873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 415 - 332
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  415 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 736 - 819
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||  |||||||| |||||||||||||||||||| ||||    
T  736 ggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaagccaaa 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 50156 - 50077
Alignment:
Q  16 agggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  50156 agggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaag 50077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 50475 - 50563
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatgggg-tgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  50475 atagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactataggggg-aaaagtgcaattaagccaaa 50563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 38664 - 38747
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||||| | ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  38664 atagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 38747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 38336 - 38283
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattga 67  Q
    ||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||    
T  38336 atagggggcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaattga 38283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 185243 - 185326
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||| | |||||||||||||||    
T  185243 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaag 185326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 184924 - 184841
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||  |||||||||||||||    
T  184924 ataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaag 184841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 7654517 - 7654600
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| || ||||||| ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  7654517 atagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaag 7654600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 10087827 - 10087910
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||| |||||| |||||||||||||||    
T  10087827 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaag 10087910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 33974268 - 33974351
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||| |||| ||||||||||    
T  33974268 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaag 33974351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 32733965 - 32734047
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaa 96  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||  ||||||||||| | ||||||||||||||    
T  32733965 atagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 2354493 - 2354406
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||| ||||||||||||||||||| ||||| |||||||| | |||||||| |||||||||||||||||| |||||||||| ||||    
T  2354493 atagggggaaaaatcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagggggaaaaa-tgcaattaagccaaa 2354406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 2354779 - 2354862
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||  || |||| ||||||||||    
T  2354779 atagggggcaaaatggctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaag 2354862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 22755058 - 22755141
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| ||||||||  ||| |||||||||||||||    
T  22755058 atagggggcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaag 22755141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 29074341 - 29074408
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactataggggg 81  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  29074341 ataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggg 29074408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 29079105 - 29079172
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactataggggg 81  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  29079105 ataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggg 29079172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 29106914 - 29106981
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactataggggg 81  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  29106914 ataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggg 29106981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 1407313 - 1407434
Alignment:
Q  322 tcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttttcttagcaataattacactatttttcgatgca 421  Q
    ||||||| ||||| ||||| ||||||| || |  |||||  ||||| |||||||| |||||  ||||||||||| ||||||||||  | |||||||||||    
T  1407313 tcctaagggcaatggttaatgatttcattattagaaact--gtcttaaaaatacatgtctttattttttcttagtaataattacatcacttttcgatgca 1407410  T
Q  422 aagttactcattttagtactttaa 445  Q
    || ||||| |||||||||||||||    
T  1407411 aacttacttattttagtactttaa 1407434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 22684327 - 22684414
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| | |||| |||||||||||||||||||  ||||||||  |||||||| |||| ||||||||||||||| ||||    
T  22684327 atagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataagggg-aaaagtgcaattaagccaaa 22684414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 22754741 - 22754654
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| | |||| |||||||||||||||||||  ||||||||  |||||||| |||| ||||||||||||||| ||||    
T  22754741 atagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataagggg-aaaagtgcaattaagccaaa 22754654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 13177029 - 13177096
Alignment:
Q  18 ggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaa 85  Q
    ||||||||||||||||||| |||||||| |||| |||||  ||||||||| | |||||||||||||||    
T  13177029 ggggcaaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagggggaaaa 13177096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 33829068 - 33828987
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaagtcaaa 102  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  ||||||||||||||| ||||    
T  33829068 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 33828987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 33829612 - 33829688
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||||||||||||||    
T  33829612 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaag 33829688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 473
Target Start/End: Original strand, 27673651 - 27673817
Alignment:
Q  307 tcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtc-ttacttttttcttagcaataattac 405  Q
    ||||||||||| ||| |||||| |||||  ||||||||| || || |  |||  |||||||| ||||||||||| ||| ||||| ||||||||||||||     
T  27673651 tcttgctaaccggtgccctaagggcaatgattaaagattccattactagaaatgttgtcttggaaatacaagtctttattttttgcttagcaataatta- 27673749  T
Q  406 actatttttcgatgcaaagttactcattttagtactttaactaatgcctcaagggctatagttagcat 473  Q
    || | | ||||||  ||| ||||| |||||| || |||||| ||||| | |||||| || ||||||||    
T  27673750 accactcttcgatataaacttacttattttactaatttaaccaatgctttaagggcaatggttagcat 27673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 451
Target Start/End: Complemental strand, 29694449 - 29694302
Alignment:
Q  305 ggtcttgctaaccagtgtcctaagagcaatagttaaagatttcaataatgaaaactttgtcttgaaaatacaagtcttacttttt-tcttagcaataatt 403  Q
    |||||||||||| |||||| ||||  |||| ||||| ||||  | ||||  |||  || ||||| |||||||||| ||  ||||| ||||| ||||||||    
T  29694449 ggtcttgctaactagtgtcttaaggacaatggttaaggattctattaatagaaatattatcttggaaatacaagtttttatttttgtcttaacaataatt 29694350  T
Q  404 acactatttttcgatgcaaagttactcattttagtactttaactaatg 451  Q
    |||  | ||||| ||||||| ||||| |||||||||||||||| ||||    
T  29694349 acatcacttttcaatgcaaacttacttattttagtactttaaccaatg 29694302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 6454612 - 6454541
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcc 453  Q
    |||| ||||||||| |||||||||||| | ||| ||||||||| ||||| ||||||||| |||||| ||||||    
T  6454612 ttacctttttcttaacaataattacacaacttt-cgatgcaaacttacttattttagtattttaaccaatgcc 6454541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 459
Target Start/End: Original strand, 23131462 - 23131566
Alignment:
Q  356 aaactttgtcttgaaaatacaagtctt-acttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactttaactaatgcct 454  Q
    ||||||||||||||||||| || | || |||||| | |||||||||||||| | | ||||   |||||| ||||| |||||||||||||||| |||  ||    
T  23131462 aaactttgtcttgaaaatataaatttttacttttgttttagcaataattacgcaactttttattgcaaaattacttattttagtactttaaccaataact 23131561  T
Q  455 caagg 459  Q
    |||||    
T  23131562 caagg 23131566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 18241908 - 18241856
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  |||||||| |||||||||||||||    
T  18241908 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaag 18241856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 9991 - 9907
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatgggg-tgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||||||||| ||||||||||| || ||||| |||||||||  |||||||||||||||||||||||||||||    
T  9991 atagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 9907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 19705 - 19634
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaa 85  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||||||| ||||||||    
T  19705 atagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggggaaaa 19634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 20012 - 20095
Alignment:
Q  14 atagggggcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    ||||||||||||||||   |||| ||||||||||| ||||||| |||||||||| |||||||| |||| |||||||||||||||    
T  20012 atagggggcaaaatcgtcagtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaag 20095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 1172 - 1120
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||| | |||  ||||||||||||||||||||||||    
T  1172 ggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaag 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 1420 - 1472
Alignment:
Q  45 ggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||| |||||||||  |||  ||||||||||||||||||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaag 1472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 6771 - 6847
Alignment:
Q  21 gcaaaatcgctcgttttaaactatggggtgcaaaattgcacaattgataaactatagggggaaaaagtgcaattaag 97  Q
    |||||||||||||||| |||  |||||||||||||| |||||||||  |||  |||||||  |||| ||||||||||    
T  6771 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaag 6847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 83583 - 83644
Alignment:
Q  381 ttacttttttcttagcaataattacactatttttcgatgcaaagttactcattttagtactt 442  Q
    |||||||| ||||| |||||||||||||| ||||  ||||||| ||||| |||||| |||||    
T  83583 ttacttttgtcttatcaataattacactactttttaatgcaaacttactaattttaatactt 83644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University