View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9852_low_9 (Length: 471)

Name: NF9852_low_9
Description: NF9852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9852_low_9
NF9852_low_9
[»] scaffold0505 (1 HSPs)
scaffold0505 (204-392)||(4449-4637)
[»] chr1 (39 HSPs)
chr1 (236-360)||(25262357-25262481)
chr1 (67-204)||(16759508-16759645)
chr1 (67-191)||(25262233-25262360)
chr1 (14-210)||(21857035-21857231)
chr1 (67-198)||(41049172-41049302)
chr1 (67-210)||(35260280-35260423)
chr1 (14-194)||(22921016-22921196)
chr1 (67-210)||(52927252-52927395)
chr1 (67-210)||(35980889-35981032)
chr1 (18-144)||(40390169-40390295)
chr1 (67-172)||(21473742-21473846)
chr1 (14-178)||(49261932-49262096)
chr1 (67-205)||(50613239-50613376)
chr1 (67-205)||(50621067-50621204)
chr1 (18-144)||(13212143-13212269)
chr1 (110-204)||(26065755-26065848)
chr1 (46-173)||(29777468-29777595)
chr1 (67-198)||(33681798-33681929)
chr1 (67-178)||(28193655-28193766)
chr1 (67-133)||(26065847-26065913)
chr1 (67-198)||(14294728-14294858)
chr1 (67-198)||(21342913-21343043)
chr1 (67-198)||(21347778-21347908)
chr1 (67-198)||(27652392-27652521)
chr1 (67-198)||(51131378-51131508)
chr1 (125-196)||(12272413-12272483)
chr1 (70-198)||(16093024-16093151)
chr1 (14-102)||(15859264-15859352)
chr1 (14-102)||(20249161-20249250)
chr1 (14-94)||(20453583-20453663)
chr1 (67-198)||(50687433-50687562)
chr1 (14-102)||(433890-433979)
chr1 (67-194)||(16381960-16382087)
chr1 (50-102)||(34510664-34510717)
chr1 (46-94)||(13989787-13989835)
chr1 (46-94)||(21474277-21474325)
chr1 (14-94)||(21708174-21708254)
chr1 (14-94)||(21712717-21712797)
chr1 (46-94)||(21922482-21922530)
[»] scaffold0357 (3 HSPs)
scaffold0357 (67-210)||(15328-15471)
scaffold0357 (50-210)||(13981-14141)
scaffold0357 (67-198)||(4787-4917)
[»] chr6 (36 HSPs)
chr6 (55-204)||(9097639-9097788)
chr6 (50-210)||(25645070-25645230)
chr6 (67-210)||(27332510-27332653)
chr6 (67-210)||(27393250-27393393)
chr6 (50-210)||(19669231-19669389)
chr6 (50-173)||(19302727-19302850)
chr6 (67-178)||(23665054-23665165)
chr6 (100-192)||(23022170-23022262)
chr6 (67-173)||(18409029-18409135)
chr6 (67-198)||(19024217-19024347)
chr6 (127-206)||(5833717-5833795)
chr6 (127-206)||(22158006-22158084)
chr6 (67-198)||(23539759-23539882)
chr6 (127-206)||(20177907-20177985)
chr6 (14-95)||(20555981-20556062)
chr6 (14-94)||(17882657-17882737)
chr6 (46-94)||(18343112-18343160)
chr6 (14-94)||(19003502-19003582)
chr6 (14-85)||(18457615-18457686)
chr6 (14-85)||(18820979-18821050)
chr6 (14-85)||(27572069-27572140)
chr6 (14-85)||(29808027-29808098)
chr6 (15-94)||(30675987-30676066)
chr6 (16-94)||(16198420-16198498)
chr6 (46-94)||(1540104-1540152)
chr6 (46-94)||(8055951-8055999)
chr6 (46-94)||(8226719-8226767)
chr6 (46-94)||(12743241-12743289)
chr6 (46-94)||(18333785-18333833)
chr6 (14-94)||(19858083-19858163)
chr6 (46-94)||(22783149-22783197)
chr6 (55-95)||(22792418-22792458)
chr6 (46-94)||(24423468-24423516)
chr6 (46-94)||(26923638-26923686)
chr6 (46-94)||(33862718-33862766)
chr6 (46-94)||(33865199-33865247)
[»] chr7 (52 HSPs)
chr7 (67-210)||(2279321-2279464)
chr7 (67-194)||(12254995-12255122)
chr7 (67-198)||(15007649-15007779)
chr7 (50-210)||(12902178-12902338)
chr7 (67-210)||(16218918-16219061)
chr7 (14-178)||(9388865-9389029)
chr7 (67-194)||(22073708-22073836)
chr7 (67-194)||(16057119-16057246)
chr7 (67-194)||(47832600-47832727)
chr7 (14-194)||(15440122-15440302)
chr7 (57-173)||(3563555-3563671)
chr7 (67-198)||(14037040-14037169)
chr7 (67-198)||(14347070-14347199)
chr7 (14-193)||(15141179-15141358)
chr7 (67-198)||(14045612-14045741)
chr7 (67-198)||(14355642-14355771)
chr7 (67-198)||(16324793-16324921)
chr7 (67-198)||(15117311-15117439)
chr7 (67-198)||(16496215-16496345)
chr7 (67-193)||(18304573-18304700)
chr7 (14-94)||(48274526-48274606)
chr7 (67-198)||(15113785-15113913)
chr7 (67-198)||(9176835-9176965)
chr7 (67-198)||(1867233-1867362)
chr7 (67-193)||(9750751-9750878)
chr7 (132-172)||(5294567-5294606)
chr7 (132-172)||(5295740-5295779)
chr7 (132-172)||(5296913-5296952)
chr7 (14-94)||(9944957-9945037)
chr7 (14-94)||(14317463-14317543)
chr7 (14-94)||(17180476-17180556)
chr7 (46-94)||(26355173-26355221)
chr7 (46-94)||(26357625-26357673)
chr7 (67-102)||(17016597-17016632)
chr7 (14-85)||(17061130-17061201)
chr7 (14-85)||(44117384-44117455)
chr7 (159-205)||(20219479-20219524)
chr7 (14-102)||(28504476-28504565)
chr7 (14-102)||(44015058-44015147)
chr7 (46-94)||(457244-457292)
chr7 (46-94)||(11392495-11392543)
chr7 (46-94)||(14948312-14948360)
chr7 (46-94)||(15375906-15375954)
chr7 (46-94)||(16233444-16233492)
chr7 (46-94)||(16410981-16411029)
chr7 (14-94)||(18628487-18628567)
chr7 (14-94)||(18641193-18641273)
chr7 (46-94)||(20384316-20384364)
chr7 (46-94)||(24703145-24703193)
chr7 (46-94)||(24705592-24705640)
chr7 (46-94)||(27217782-27217830)
chr7 (14-90)||(38897496-38897572)
[»] scaffold0165 (1 HSPs)
scaffold0165 (67-210)||(26844-26987)
[»] scaffold0008 (1 HSPs)
scaffold0008 (14-210)||(13699-13895)
[»] chr8 (37 HSPs)
chr8 (14-210)||(20499414-20499610)
chr8 (57-210)||(982569-982722)
chr8 (67-194)||(21287013-21287140)
chr8 (14-206)||(38854400-38854592)
chr8 (67-198)||(13507232-13507362)
chr8 (67-198)||(13596764-13596894)
chr8 (67-194)||(7464904-7465031)
chr8 (67-205)||(17266144-17266280)
chr8 (50-210)||(6521144-6521304)
chr8 (18-144)||(21697367-21697493)
chr8 (67-172)||(17611295-17611399)
chr8 (67-144)||(22966829-22966906)
chr8 (14-173)||(28648222-28648381)
chr8 (67-198)||(14102352-14102480)
chr8 (46-167)||(15071302-15071423)
chr8 (67-178)||(5609843-5609954)
chr8 (50-173)||(22627548-22627672)
chr8 (14-102)||(19936187-19936275)
chr8 (67-198)||(17438664-17438794)
chr8 (67-198)||(19154012-19154142)
chr8 (67-194)||(19800629-19800756)
chr8 (67-198)||(22365477-22365606)
chr8 (67-181)||(40492028-40492142)
chr8 (15-102)||(23407266-23407354)
chr8 (46-94)||(22002676-22002724)
chr8 (67-102)||(20532536-20532571)
chr8 (152-198)||(39834499-39834544)
chr8 (50-95)||(22526433-22526478)
chr8 (14-94)||(1326392-1326472)
chr8 (46-94)||(1485323-1485371)
chr8 (67-95)||(2418003-2418031)
chr8 (46-94)||(4484201-4484249)
chr8 (46-94)||(5852486-5852534)
chr8 (46-94)||(14408637-14408685)
chr8 (46-94)||(14824697-14824745)
chr8 (14-94)||(20045356-20045436)
chr8 (55-95)||(28398512-28398552)
[»] chr4 (42 HSPs)
chr4 (57-204)||(12287344-12287491)
chr4 (14-194)||(52242365-52242545)
chr4 (67-203)||(46643652-46643788)
chr4 (67-210)||(11023-11166)
chr4 (14-210)||(15100104-15100300)
chr4 (14-194)||(39705433-39705614)
chr4 (67-194)||(43197840-43197967)
chr4 (67-174)||(15374280-15374386)
chr4 (15-94)||(23802354-23802433)
chr4 (67-210)||(53081303-53081444)
chr4 (18-144)||(3838097-3838223)
chr4 (67-172)||(15368481-15368585)
chr4 (67-172)||(15371990-15372094)
chr4 (18-144)||(20150844-20150970)
chr4 (67-172)||(16224330-16224434)
chr4 (67-178)||(15191124-15191235)
chr4 (118-204)||(15464182-15464268)
chr4 (50-173)||(16376707-16376829)
chr4 (14-198)||(15867817-15868000)
chr4 (67-198)||(32852240-32852370)
chr4 (14-94)||(54797833-54797913)
chr4 (11-85)||(6191334-6191408)
chr4 (14-94)||(14969974-14970054)
chr4 (14-85)||(44103111-44103182)
chr4 (17-102)||(21817874-21817960)
chr4 (15-102)||(22637317-22637406)
chr4 (46-94)||(7640379-7640427)
chr4 (14-94)||(18238773-18238853)
chr4 (46-94)||(44616212-44616260)
chr4 (46-94)||(50221531-50221579)
chr4 (67-102)||(17334214-17334249)
chr4 (14-102)||(14039503-14039593)
chr4 (14-102)||(16597499-16597588)
chr4 (50-102)||(3097493-3097546)
chr4 (14-102)||(7799509-7799598)
chr4 (46-94)||(1836713-1836761)
chr4 (46-94)||(12032964-12033012)
chr4 (46-94)||(14717913-14717961)
chr4 (46-94)||(15117545-15117593)
chr4 (14-94)||(19617343-19617422)
chr4 (55-95)||(26790279-26790319)
chr4 (46-94)||(29268277-29268325)
[»] scaffold0914 (1 HSPs)
scaffold0914 (14-207)||(3854-4047)
[»] chr5 (27 HSPs)
chr5 (67-210)||(20026072-20026215)
chr5 (14-194)||(26011183-26011363)
chr5 (14-194)||(22144841-22145021)
chr5 (67-210)||(22177347-22177488)
chr5 (69-194)||(21328724-21328849)
chr5 (28-145)||(24068247-24068364)
chr5 (67-210)||(21740745-21740888)
chr5 (67-163)||(5888390-5888487)
chr5 (50-173)||(9078765-9078889)
chr5 (50-173)||(24529984-24530107)
chr5 (67-177)||(27988105-27988213)
chr5 (67-198)||(36315366-36315496)
chr5 (68-194)||(21870803-21870929)
chr5 (68-194)||(21875083-21875209)
chr5 (18-102)||(22958712-22958797)
chr5 (14-94)||(2153899-2153979)
chr5 (46-94)||(263961-264009)
chr5 (46-94)||(10732130-10732178)
chr5 (14-94)||(20765177-20765257)
chr5 (14-94)||(22413110-22413190)
chr5 (14-94)||(39246057-39246137)
chr5 (14-94)||(20901273-20901353)
chr5 (46-94)||(20909936-20909984)
chr5 (46-94)||(29346902-29346950)
chr5 (46-94)||(29349375-29349423)
chr5 (46-94)||(29351848-29351896)
chr5 (46-94)||(39364305-39364353)
[»] scaffold0413 (2 HSPs)
scaffold0413 (67-210)||(13420-13564)
scaffold0413 (11-102)||(14762-14854)
[»] scaffold0075 (3 HSPs)
scaffold0075 (67-210)||(50746-50889)
scaffold0075 (66-171)||(7505-7610)
scaffold0075 (14-103)||(538-627)
[»] scaffold0010 (1 HSPs)
scaffold0010 (67-210)||(59886-60028)
[»] scaffold0737 (1 HSPs)
scaffold0737 (67-204)||(926-1062)
[»] chr2 (32 HSPs)
chr2 (14-210)||(20519267-20519463)
chr2 (69-210)||(18786012-18786153)
chr2 (43-210)||(7680072-7680239)
chr2 (67-204)||(19672684-19672820)
chr2 (14-194)||(23705428-23705608)
chr2 (67-203)||(22412315-22412449)
chr2 (67-210)||(23208127-23208269)
chr2 (14-194)||(25176634-25176814)
chr2 (14-194)||(23137900-23138080)
chr2 (14-194)||(23549690-23549870)
chr2 (67-198)||(23792117-23792246)
chr2 (67-198)||(23005593-23005722)
chr2 (67-198)||(25109711-25109840)
chr2 (124-173)||(23660835-23660884)
chr2 (67-193)||(21326779-21326905)
chr2 (67-198)||(22458690-22458818)
chr2 (14-102)||(27754408-27754497)
chr2 (67-193)||(21317870-21317996)
chr2 (14-94)||(22172926-22173006)
chr2 (161-210)||(6972-7021)
chr2 (25-94)||(24528825-24528894)
chr2 (46-94)||(26506300-26506348)
chr2 (46-94)||(26508778-26508826)
chr2 (46-94)||(27919957-27920005)
chr2 (14-94)||(45027167-45027247)
chr2 (46-94)||(572320-572368)
chr2 (46-94)||(18809864-18809912)
chr2 (46-94)||(23131783-23131831)
chr2 (46-94)||(23134250-23134298)
chr2 (46-94)||(23711206-23711254)
chr2 (46-94)||(32038690-32038738)
chr2 (46-94)||(39683237-39683285)
[»] scaffold0621 (1 HSPs)
scaffold0621 (67-198)||(9333-9464)
[»] scaffold0012 (1 HSPs)
scaffold0012 (67-194)||(228262-228389)
[»] chr3 (51 HSPs)
chr3 (15-198)||(37250265-37250447)
chr3 (67-204)||(23275480-23275616)
chr3 (67-194)||(2044856-2044983)
chr3 (67-194)||(2047585-2047712)
chr3 (67-194)||(52522929-52523056)
chr3 (67-204)||(15471706-15471843)
chr3 (14-210)||(1464580-1464776)
chr3 (50-198)||(42387177-42387326)
chr3 (14-173)||(18439347-18439506)
chr3 (46-173)||(8500256-8500383)
chr3 (50-173)||(40212906-40213029)
chr3 (45-210)||(22109459-22109622)
chr3 (67-172)||(24339940-24340044)
chr3 (67-205)||(12386244-12386381)
chr3 (50-173)||(25475569-25475693)
chr3 (66-173)||(27165988-27166095)
chr3 (67-178)||(22792103-22792214)
chr3 (14-102)||(12171293-12171382)
chr3 (67-198)||(14501988-14502118)
chr3 (67-210)||(21838284-21838425)
chr3 (71-198)||(28195452-28195578)
chr3 (67-198)||(10557649-10557779)
chr3 (67-193)||(12851565-12851692)
chr3 (11-103)||(45798097-45798190)
chr3 (14-173)||(53300772-53300930)
chr3 (14-102)||(13443085-13443174)
chr3 (14-102)||(53069848-53069937)
chr3 (67-103)||(23412376-23412412)
chr3 (67-191)||(45219412-45219533)
chr3 (14-94)||(45577602-45577682)
chr3 (14-94)||(50243836-50243916)
chr3 (67-102)||(17738197-17738232)
chr3 (67-102)||(19039517-19039552)
chr3 (67-129)||(14235331-14235393)
chr3 (67-144)||(605522-605598)
chr3 (14-94)||(21619425-21619505)
chr3 (67-143)||(43927982-43928058)
chr3 (14-94)||(15978456-15978536)
chr3 (46-94)||(45606119-45606167)
chr3 (46-94)||(55477413-55477461)
chr3 (159-198)||(45798011-45798050)
chr3 (11-85)||(29171797-29171871)
chr3 (67-140)||(320137-320209)
chr3 (67-140)||(23317937-23318009)
chr3 (14-102)||(49388792-49388881)
chr3 (46-94)||(7780538-7780586)
chr3 (46-94)||(10246915-10246963)
chr3 (46-94)||(13150981-13151029)
chr3 (46-94)||(13153449-13153497)
chr3 (46-94)||(17464099-17464147)
chr3 (46-94)||(34160247-34160295)
[»] scaffold0114 (1 HSPs)
scaffold0114 (67-204)||(46242-46378)
[»] scaffold0040 (1 HSPs)
scaffold0040 (50-210)||(102771-102931)
[»] scaffold0130 (1 HSPs)
scaffold0130 (67-210)||(905-1049)
[»] scaffold0007 (1 HSPs)
scaffold0007 (67-205)||(17107-17244)
[»] scaffold0100 (1 HSPs)
scaffold0100 (14-208)||(23654-23848)
[»] scaffold0034 (1 HSPs)
scaffold0034 (67-204)||(33276-33413)
[»] scaffold0476 (1 HSPs)
scaffold0476 (14-198)||(8567-8750)
[»] scaffold0021 (2 HSPs)
scaffold0021 (56-186)||(135515-135644)
scaffold0021 (56-186)||(144223-144352)
[»] scaffold0320 (1 HSPs)
scaffold0320 (67-204)||(12777-12913)
[»] scaffold0555 (1 HSPs)
scaffold0555 (67-210)||(9769-9912)
[»] scaffold0163 (1 HSPs)
scaffold0163 (67-188)||(26412-26533)
[»] scaffold0530 (1 HSPs)
scaffold0530 (14-194)||(177-357)
[»] scaffold1403 (1 HSPs)
scaffold1403 (67-210)||(1350-1491)
[»] scaffold0273 (1 HSPs)
scaffold0273 (43-194)||(8616-8767)
[»] scaffold0243 (1 HSPs)
scaffold0243 (14-194)||(5271-5451)
[»] scaffold0231 (1 HSPs)
scaffold0231 (67-210)||(11182-11325)
[»] scaffold0078 (1 HSPs)
scaffold0078 (50-193)||(11321-11464)
[»] scaffold0247 (2 HSPs)
scaffold0247 (67-172)||(17245-17349)
scaffold0247 (14-87)||(1108-1181)
[»] scaffold0022 (2 HSPs)
scaffold0022 (67-203)||(81109-81242)
scaffold0022 (14-94)||(117473-117553)
[»] scaffold0005 (1 HSPs)
scaffold0005 (66-210)||(268480-268622)
[»] scaffold0138 (2 HSPs)
scaffold0138 (67-194)||(13706-13833)
scaffold0138 (67-198)||(17365-17495)
[»] scaffold0122 (3 HSPs)
scaffold0122 (50-173)||(25249-25372)
scaffold0122 (50-173)||(32679-32802)
scaffold0122 (46-94)||(33816-33864)
[»] scaffold0420 (1 HSPs)
scaffold0420 (68-205)||(5461-5597)
[»] scaffold0151 (1 HSPs)
scaffold0151 (14-173)||(10957-11117)
[»] scaffold0162 (1 HSPs)
scaffold0162 (67-203)||(25475-25609)
[»] scaffold0139 (1 HSPs)
scaffold0139 (67-198)||(39159-39289)
[»] scaffold0333 (2 HSPs)
scaffold0333 (67-194)||(7405-7532)
scaffold0333 (67-194)||(14785-14912)
[»] scaffold0540 (1 HSPs)
scaffold0540 (50-173)||(197-321)
[»] scaffold0009 (1 HSPs)
scaffold0009 (67-198)||(86382-86510)
[»] scaffold0120 (5 HSPs)
scaffold0120 (18-144)||(29330-29456)
scaffold0120 (14-193)||(46718-46899)
scaffold0120 (14-193)||(32107-32288)
scaffold0120 (50-102)||(10258-10311)
scaffold0120 (50-102)||(16969-17022)
[»] scaffold0074 (1 HSPs)
scaffold0074 (71-173)||(38173-38275)
[»] scaffold0026 (1 HSPs)
scaffold0026 (14-198)||(40655-40840)
[»] scaffold0003 (1 HSPs)
scaffold0003 (67-173)||(339152-339258)
[»] scaffold0020 (2 HSPs)
scaffold0020 (121-194)||(15086-15159)
scaffold0020 (67-96)||(15050-15079)
[»] scaffold2004 (1 HSPs)
scaffold2004 (67-194)||(54-181)
[»] scaffold0056 (2 HSPs)
scaffold0056 (66-173)||(16414-16521)
scaffold0056 (14-102)||(78540-78629)
[»] scaffold0627 (1 HSPs)
scaffold0627 (67-173)||(717-823)
[»] scaffold0098 (1 HSPs)
scaffold0098 (67-198)||(29550-29680)
[»] scaffold0076 (1 HSPs)
scaffold0076 (67-198)||(22499-22628)
[»] scaffold0072 (1 HSPs)
scaffold0072 (67-198)||(62331-62459)
[»] scaffold0601 (1 HSPs)
scaffold0601 (67-184)||(7512-7627)
[»] scaffold0261 (1 HSPs)
scaffold0261 (67-198)||(17468-17598)
[»] scaffold0192 (1 HSPs)
scaffold0192 (67-171)||(10725-10829)
[»] scaffold0184 (1 HSPs)
scaffold0184 (67-198)||(247-377)
[»] scaffold0142 (2 HSPs)
scaffold0142 (67-193)||(1636-1763)
scaffold0142 (14-85)||(17673-17744)
[»] scaffold0124 (1 HSPs)
scaffold0124 (67-193)||(23851-23978)
[»] scaffold0013 (1 HSPs)
scaffold0013 (14-102)||(31147-31235)
[»] scaffold0970 (1 HSPs)
scaffold0970 (14-194)||(1376-1555)
[»] scaffold0695 (1 HSPs)
scaffold0695 (18-94)||(6866-6942)
[»] scaffold0090 (1 HSPs)
scaffold0090 (67-205)||(2847-2983)
[»] scaffold1355 (1 HSPs)
scaffold1355 (14-102)||(9-98)
[»] scaffold0686 (1 HSPs)
scaffold0686 (67-198)||(2102-2232)
[»] scaffold0358 (2 HSPs)
scaffold0358 (14-85)||(5605-5676)
scaffold0358 (14-85)||(15065-15136)
[»] scaffold0235 (1 HSPs)
scaffold0235 (14-103)||(14520-14610)
[»] scaffold0112 (1 HSPs)
scaffold0112 (12-94)||(23069-23151)
[»] scaffold0180 (1 HSPs)
scaffold0180 (67-132)||(31370-31434)
[»] scaffold0028 (4 HSPs)
scaffold0028 (15-102)||(277-366)
scaffold0028 (46-94)||(137603-137651)
scaffold0028 (46-94)||(142541-142589)
scaffold0028 (46-94)||(145010-145058)
[»] scaffold0006 (2 HSPs)
scaffold0006 (67-198)||(97869-97999)
scaffold0006 (67-198)||(107147-107277)
[»] scaffold0535 (1 HSPs)
scaffold0535 (14-94)||(7599-7679)
[»] scaffold0228 (3 HSPs)
scaffold0228 (14-85)||(5381-5452)
scaffold0228 (14-85)||(12963-13034)
scaffold0228 (14-85)||(22915-22986)
[»] scaffold0145 (1 HSPs)
scaffold0145 (14-94)||(8194-8274)
[»] scaffold0121 (1 HSPs)
scaffold0121 (14-102)||(7681-7769)
[»] scaffold0083 (1 HSPs)
scaffold0083 (14-94)||(42320-42400)
[»] scaffold0017 (1 HSPs)
scaffold0017 (67-193)||(190484-190610)
[»] scaffold0628 (1 HSPs)
scaffold0628 (14-85)||(1973-2044)
[»] scaffold0001 (1 HSPs)
scaffold0001 (68-191)||(84457-84577)
[»] scaffold1434 (1 HSPs)
scaffold1434 (14-102)||(122-212)
[»] scaffold0102 (1 HSPs)
scaffold0102 (135-193)||(47732-47789)
[»] scaffold1257 (1 HSPs)
scaffold1257 (26-102)||(1460-1537)
[»] scaffold0876 (1 HSPs)
scaffold0876 (50-102)||(2265-2318)
[»] scaffold0810 (1 HSPs)
scaffold0810 (14-102)||(4764-4853)
[»] scaffold0253 (1 HSPs)
scaffold0253 (50-102)||(3752-3805)
[»] scaffold0230 (1 HSPs)
scaffold0230 (14-94)||(14871-14951)
[»] scaffold0081 (1 HSPs)
scaffold0081 (67-140)||(4004-4076)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-102)||(5355-5444)
[»] scaffold0507 (1 HSPs)
scaffold0507 (154-194)||(7346-7386)
[»] scaffold0481 (1 HSPs)
scaffold0481 (46-94)||(51-99)
[»] scaffold0444 (1 HSPs)
scaffold0444 (46-94)||(14315-14363)
[»] scaffold0319 (1 HSPs)
scaffold0319 (14-94)||(6136-6216)
[»] scaffold0297 (1 HSPs)
scaffold0297 (46-94)||(2897-2945)
[»] scaffold0134 (1 HSPs)
scaffold0134 (46-94)||(38743-38791)
[»] scaffold0107 (1 HSPs)
scaffold0107 (46-94)||(51307-51355)
[»] scaffold0101 (1 HSPs)
scaffold0101 (18-94)||(427-503)
[»] scaffold0044 (1 HSPs)
scaffold0044 (46-94)||(41321-41369)
[»] scaffold0031 (1 HSPs)
scaffold0031 (46-94)||(56199-56247)
[»] scaffold0023 (1 HSPs)
scaffold0023 (46-94)||(95332-95380)
[»] scaffold0019 (1 HSPs)
scaffold0019 (14-94)||(158706-158786)


Alignment Details
Target: scaffold0505 (Bit Score: 165; Significance: 5e-88; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 204 - 392
Target Start/End: Complemental strand, 4637 - 4449
Alignment:
Q  204 atggttatgattaaattattaaattcaaatatgattttatcgtacttatatgcatgtttgattaaatttggtttgatactgtgatgatatgaatacgatt 303  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |    
T  4637 atggttatgattaaattattaaattcaaatatgattttatcatacttatatgcatgtttgattaaatttgatttggtactgtgatgatatgaatacgaat 4538  T
Q  304 cgtacgtgtctgttcgttttacaagcttattgaatatgcaaattaatatatggttttatgtgtgtatgctatcattttgacagtatgtc 392  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4537 cgtacgtgtctgttcgttttacaagcttattgaataggcaaattaatatatggttttatgtgtgtctgctatcattttgacagtatgtc 4449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 25262357 - 25262481
Alignment:
Q  236 gattttatcgtacttatatgcatgtttgattaaatttggtttgatactgtgatgatatgaatacgattcgtacgtgtctgttcgttttacaagcttattg 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25262357 gattttatcgtacttatatgcatgtttgattaaatttggtttgatactgtgatgatatgaatacgattcgtacgtgtctgttcgttttacaagcttattg 25262456  T
Q  336 aatatgcaaattaatatatggtttt 360  Q
    |||||||||||||||||||||||||    
T  25262457 aatatgcaaattaatatatggtttt 25262481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 16759645 - 16759508
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16759645 taaggtaagggtgagactagcattcaattctattaatctgtataattcttatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 16759546  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    |||||||||||||||||||||||||||||||| |||||    
T  16759545 gggttaaagtgagaaattgaggattaattgatgtagaa 16759508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 25262233 - 25262360
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25262233 taagataagggtgagactagcattcaattctattaatctgtataattctgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 25262332  T
Q  167 gggtta---aagtgagaaattgaggatt 191  Q
    ||||||   |||||||||||||||||||    
T  25262333 gggttaaataagtgagaaattgaggatt 25262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 21857035 - 21857231
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| || | | | | |||| |||| |||||| ||   |||||||||||||||||||| |||||||| ||||||  | |||||||    
T  21857035 gagaaaaagccaagagaagagaaagagacccagagagctgcgattttcattgttaaggtaagggtgagactagaattcaattatattaacctatataatt 21857134  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
     ||||  ||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  21857135 ctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattagggttaaagagagaaattgaggattaattgatgtagaatggtta 21857231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 41049172 - 41049302
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||| ||||||||||||||| | || ||||||||||| |||||    
T  41049172 taaggtaagggtgagactagcattcaattctattaagttgtataattatgatggttgtattcaacaagtgtaggattaatttggagaagttgga-aatta 41049270  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||| |||||||||||    
T  41049271 gggttaaagtgagaaattgatgattaattgat 41049302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 35260280 - 35260423
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 165  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  35260280 taaggtaagggtgagactaacattcaattctattaagctgtataattttgatggttgtatttaacaagtgtaagattgattttagagaa-ttggagaatt 35260378  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||||| | ||||||||||| |||||||||| |||||| ||||    
T  35260379 agggttaaggcgagaaattgagaattaattgatgtagaattgtta 35260423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 22921016 - 22921196
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatt-ttgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| ||||||||||||||||| | |||||||| || |||| || || | ||||||||||||||||||| ||||||||||||||||  | ||| ||    
T  22921016 gagaaaaagccaagagaagggagaaagacctagagtgttgcgattatttattc-taaggtaagggtgagactaacattcaattctattaacctatatgat 22921114  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    |   ||  ||||||||| |||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  22921115 tcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaactagggttaatgagagaaattgaggattaat 22921196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 52927252 - 52927395
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| ||| ||||  ||||||||| |||||||| ||||||||||||||||||||| || ||    
T  52927252 taaggtaagggtgagactaacattcaattctattaacctatatgattctgatgattgtatttagcaagtgtatgattgaattagagaagttggaaaacta 52927351  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | |  ||||||||||||||||||| |||||||||||    
T  52927352 gggttaatgaggaaaattgaggattaattgatgtagaatggtta 52927395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 35980889 - 35981032
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||| |||||| |||||||  |||| ||| |||| |||  |||||||||||||||||||||||||||| ||||||| || ||    
T  35980889 taaggtaagggtgagactagcaatcaattatattaatcggtatgattctgatggttaaatttaacaagtgtaggattgaattagaggagttggaaaacta 35980988  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
     |||||| | |  |||||||| |||||||||| |||||||||||    
T  35980989 tggttaatgaggaaaattgagcattaattgatgtagaatggtta 35981032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 40390295 - 40390169
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 117  Q
    |||| ||||||||||||||||| | |||||| |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  40390295 aaaagccaagagaagggagaaacacctagagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 40390196  T
Q  118 tagttgtatttaacaagtgtaggattg 144  Q
    |  || |||||||||||||||||||||    
T  40390195 tgattttatttaacaagtgtaggattg 40390169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 21473846 - 21473742
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || |||||| || |||||||||||||||||||||||||| ||||||    
T  21473846 taaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttagcaggtgtaggattgaattagagaagttgg-gaatta 21473748  T
Q  167 gggtta 172  Q
    ||||||    
T  21473747 gggtta 21473742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 49262096 - 49261932
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  ||   |||||||||||||||| |||||||||||||||||||| | ||| |||    
T  49262096 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaatttctaaggtaagggtgagattagcattcaattctattaatctatatgatt 49261997  T
Q  114 ttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaattagggttaaagtga 178  Q
     |||| |||||||||| |||| |||||||| || ||||||||||| |||||||| |||||||||||    
T  49261996 ctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatta-ggttaaagtga 49261932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 50613239 - 50613376
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||| |||||||| |||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  50613239 taaggtaagggtgagactaacattcaatcctattaag-tctgtaattatgattgttgtatttaacaagtgtaggatttgttttagaaaagttg-agaatt 50613336  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    ||||||||||||| ||||||| ||||||||||| ||||||    
T  50613337 agggttaaagtgataaattgatgattaattgatgtagaat 50613376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 50621067 - 50621204
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||| |||||||| |||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  50621067 taaggtaagggtgagactaacattcaatcctattaag-tctgtaattatgattgttgtatttaacaagtgtaggatttgttttagaaaagttg-agaatt 50621164  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    ||||||||||||| ||||||| ||||||||||| ||||||    
T  50621165 agggttaaagtgataaattgatgattaattgatgtagaat 50621204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 13212143 - 13212269
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 117  Q
    |||| ||||| ||||||||||| ||||| || |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  13212143 aaaagccaagggaagggagaaacatctaaagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 13212242  T
Q  118 tagttgtatttaacaagtgtaggattg 144  Q
    |  || |||||||||||||||||||||    
T  13212243 tgattttatttaacaagtgtaggattg 13212269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 26065848 - 26065755
Alignment:
Q  110 aattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    |||| |||| |||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  26065848 aattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aattagggttaaagtgagaaattgatgattaattgatgtagaa 26065755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 29777595 - 29777468
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga 145  Q
    |||||||| ||||||||   |||||||||||||||||||| | | ||||||||||||| |  |||||| ||||  ||||||||| ||||||| |||||||    
T  29777595 gagtgctgcgattttgagttataaggtaagggtgagactaacttacaattctattaatctaaataattctgatgattgtatttagcaagtgttggattga 29777496  T
Q  146 attagagaagttggagaattagggttaa 173  Q
    |||||| | |||||||||||||||||||    
T  29777495 attagaaaggttggagaattagggttaa 29777468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 33681929 - 33681798
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | |  |||||||||||| | ||| ||| ||||| ||||||||| |||||||||||||||||||||||||| | | || ||    
T  33681929 taaggtaagggtgagactaacttataattctattaatctatatgattctgataattgtatttagcaagtgtaggattgaattagagaagtcgaaaaacta 33681830  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||| | |  |||||||||||||||||||    
T  33681829 gggttaatgaggaaaattgaggattaattgat 33681798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 28193655 - 28193766
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    |||||||||||||||||||| |||||||||||||||| | ||| |||||||| |||||| ||| |||| |||||||| || ||||||||||| |||||||    
T  28193655 taaggtaagggtgagactagtattcaattctattaatctatatgattttgatggttgtaattagcaagagtaggattggatttagagaagtttgagaatt 28193754  T
Q  166 agggttaaagtga 178  Q
    | |||||||||||    
T  28193755 a-ggttaaagtga 28193766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 26065913 - 26065847
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaa 133  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  26065913 taaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaa 26065847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 14294728 - 14294858
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  14294728 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 14294825  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||| ||||||||||   |||||||||||    
T  14294826 agggttaaggtgagaaatttgagattaattgat 14294858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 21343043 - 21342913
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    ||||||||||||| ||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||  || |||||| ||| ||||||    
T  21343043 taaggtaagggtgggactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttg-agaatt 21342946  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||   |||||||||||    
T  21342945 agggttaaagtgagaaatttgagattaattgat 21342913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 21347908 - 21347778
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    ||||||||||||| ||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||  || |||||| ||| ||||||    
T  21347908 taaggtaagggtgggactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttg-agaatt 21347811  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||   |||||||||||    
T  21347810 agggttaaagtgagaaatttgagattaattgat 21347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 27652392 - 27652521
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||| ||| |  |||||||| ||||||||||    
T  27652392 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtagaattagttttagagaa-ttggagaatt 27652489  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |  |||||||||||||||||| |||||||||||    
T  27652490 a-agttaaagtgagaaattgatgattaattgat 27652521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 51131508 - 51131378
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  51131508 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 51131411  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||| ||||||||||   |||||||||||    
T  51131410 agggttaaggtgagaaatttgagattaattgat 51131378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 12272483 - 12272413
Alignment:
Q  125 atttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattg 196  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  12272483 atttaacaagtgtaggattaatttagagaagttggagaatta-ggttaaagtgaggaattgatgattaattg 12272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 16093024 - 16093151
Alignment:
Q  70 ggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaattagg 168  Q
    |||||||||||||||| ||||||||| ||||||  | ||| |||   ||| ||  ||||||| ||||||||||||| || |||||| ||| |||||||||    
T  16093024 ggtaagggtgagactaacattcaattttattaag-tctatgattcatataattaaatttaaccagtgtaggattgattttagagaatttg-agaattagg 16093121  T
Q  169 gttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||| | |||||||||    
T  16093122 gttaaagtgagaaattgatggttaattgat 16093151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 15859264 - 15859352
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 102  Q
    |||||||| ||||||||||||||||| | |||    |||| |||||||||   |||||||||||||||||||||||| |||||||||||    
T  15859264 gagaaaaagccaagagaagggagaaagacctacgaagctgcgattttgattattaaggtaagggtgagactagcatttaattctattaa 15859352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 20249250 - 20249161
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||| | ||||||||||| |||||| |    ||||||||||||||||||| | || ||||||||||||    
T  20249250 gagaaaaagccaagagaagggagaaagacctagagtgctgcgattttcactgttaaggtaagggtgagactaactttgcaattctattaa 20249161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20453583 - 20453663
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| | ||||||||||||||| ||||||   |||| |||||||||   ||||||||||||||||||| ||||||||    
T  20453583 gagaaaaagctaagagaagggagaaagatctagcaagctgcgattttgattgttaaggtaagggtgagactaacattcaat 20453663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 50687562 - 50687433
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    ||||||||| ||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||||  || |||||| ||| ||||||    
T  50687562 taaggtaagagtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttg-agaatt 50687465  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    ||| |||||| |||||||||| |||||||||||    
T  50687464 agg-ttaaagggagaaattgatgattaattgat 50687433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 433979 - 433890
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  433979 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 433890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 16382087 - 16381960
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 164  Q
    ||||||||||||| ||||||||||||||||||||||  | | |||||   || ||||||||||||| | ||||||||| |  || ||| | || ||||||    
T  16382087 taaggtaagggtgggactagcattcaattctattaa-gtctgtaattcatatggttgtatttaacatgttgtaggattagtttttgagga-tttgagaat 16381990  T
Q  165 tagggttaaagtgagaaattgaggattaat 194  Q
    ||||||||||||||| |||||| |||||||    
T  16381989 tagggttaaagtgaggaattgatgattaat 16381960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 34510717 - 34510664
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  34510717 gctgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 34510664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 13989835 - 13989787
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  13989835 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 13989787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 21474277 - 21474325
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  21474277 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 21474325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21708254 - 21708174
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||| ||||| | ||||||    
T  21708254 gagaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgggactaaccttcaat 21708174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21712797 - 21712717
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||| ||||| | ||||||    
T  21712797 gagaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgggactaaccttcaat 21712717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 21922482 - 21922530
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  21922482 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 21922530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 116; Significance: 8e-59; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 15328 - 15471
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15328 taaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtaggattaaattagagaagttggagaatta 15427  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  15428 gggtttaagtgagaaattgaggattaattgatgtagaatggtta 15471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 14141 - 13981
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-att 148  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||| ||||  ||    
T  14141 gctgcgattttgatttctaaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtaggtttgatttt 14042  T
Q  149 agagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  14041 agagaa-ttagagaattagggttaaggtgagaaattgaggattaattgatatagaattgtta 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 4917 - 4787
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 164  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||| |||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  4917 taaggtaagggtgggactagcattcaattctattaa-gtctatgattctgatggttgtatttaacaggttgtaggattagtttttgagaa-tttgagaat 4820  T
Q  165 tagggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||||||||||||||||| |||||||||||    
T  4819 ta-ggttaaagtgagaaattgatgattaattgat 4787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 9097639 - 9097788
Alignment:
Q  55 gattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaa 154  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| |||| || ||||||||||||||||||||||||||||||||    
T  9097639 gattttgattcttaaggtaagggtgagactagcattcaattctattaatctatataattatgatggtcgtatttaacaagtgtaggattgaattagagaa 9097738  T
Q  155 gttggagaattagggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  9097739 gttggagaattagggttaaagagagaaattgaggattaattgatgtagaa 9097788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 25645230 - 25645070
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||||||||||||    ||||||||||||||||||||||||||| ||||||||| | ||| ||| ||||| ||||||||| ||| |||||||| ||||||    
T  25645230 gctgtgattttgaattttaaggtaagggtgagactagcattcaactctattaatctatatgattctgataattgtatttagcaaatgtaggatcgaatta 25645131  T
Q  150 gagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||||||| ||  |||||||| | |||||||||||||||||||||| |||||||||||    
T  25645130 gagaagttggaaaacaagggttaatgagagaaattgaggattaattgatgtagaatggtta 25645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 27332510 - 27332653
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||||||||||   | |||||||   || |||||||||| ||| ||||||||||||||| ||||||| || || ||    
T  27332510 taaggtaagggtgagactagcattcaattctattatcctatataattcatatggttgtatttagcaaatgtaggattgaattatagaagtttgaaaacta 27332609  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  27332610 gggttaatgagagaaattgaggattaattgatgtagaatggtta 27332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 27393250 - 27393393
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||||||||||   | |||||||   || |||||||||| ||| ||||||||||||||| ||||||| || || ||    
T  27393250 taaggtaagggtgagactagcattcaattctattatcctatataattcatatggttgtatttagcaaatgtaggattgaattatagaagtttgaaaacta 27393349  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  27393350 gggttaatgagagaaattgaggattaattgatgtagaatggtta 27393393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 19669389 - 19669231
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||  |||||||||||||||||||| |||||||| |||||||  ||||||||| |||| |||||||||| |||||   ||||| | |||    
T  19669389 gctgcgattttgatttataaggtaagggtgagactaacattcaatcctattaagttgtataattctgatggttgtatttagcaagttgtggattaattta 19669290  T
Q  150 gagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    || |||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  19669289 gaaaagttgga-aatta-ggttaaagtgagaaattgatgattaattgatgtagaatggtta 19669231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 19302727 - 19302850
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||| ||||| |||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  19302727 gctgcgattttgatctataagataagggtgagactaacttgcaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 19302826  T
Q  150 gagaagttggagaattagggttaa 173  Q
    ||||||| ||||||||||||||||    
T  19302827 gagaagtcggagaattagggttaa 19302850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 23665054 - 23665165
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| |||| |||||||||| |||| |||||||| || ||||||||||| |||||||    
T  23665054 taaggtaagggtgagactagcattcaattctattaatctatatgattctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatt 23665153  T
Q  166 agggttaaagtga 178  Q
    | |||||||||||    
T  23665154 a-ggttaaagtga 23665165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 100 - 192
Target Start/End: Complemental strand, 23022262 - 23022170
Alignment:
Q  100 taatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggatta 192  Q
    |||| ||||| ||| |||||||| || |||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  23022262 taatctgtatgattctgatagttataattaacaagcgtaggattgaattagagaagttggaaaattagggttaaagagagaaattgagaatta 23022170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 18409029 - 18409135
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| ||||| |||||||||||||||||||| |||||||||    
T  18409029 taaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtataggattgaattagagaagtcggagaatta 18409128  T
Q  167 gggttaa 173  Q
    |||||||    
T  18409129 gggttaa 18409135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 19024347 - 19024217
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    |||||||||||||||||| |||||||||||||||||  | | ||||| ||||  ||   |||||||||||||||||||  || |||||| ||| ||||||    
T  19024347 taaggtaagggtgagacttgcattcaattctattaag-tctgtaattctgatgattaagtttaacaagtgtaggattggttttagagaatttg-agaatt 19024250  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||  ||||||||||||    
T  19024249 agggttaaagtgagaaatttgggattaattgat 19024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 5833717 - 5833795
Alignment:
Q  127 ttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 206  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | ||| ||||||| |||||||||| |||||||    
T  5833717 ttaacaagt-taggattgaattagagaagttggaaaactagggttaatgagaggaattgagaattaattgatgtagaatg 5833795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 22158006 - 22158084
Alignment:
Q  127 ttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 206  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | ||||||||||| |||| ||||| |||||||    
T  22158006 ttaacaagt-taggattgaattagagaagttggaaaactagggttaatgagagaaattgagaattagttgatgtagaatg 22158084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 23539882 - 23539759
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaaca-agtgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||| ||||||||||| ||||||||||  ||||||||| |||| ||||||||||||| | ||||||||| | ||       || |||||||    
T  23539882 taaggtaagggtgggactagcattcgattctattaa-gtgtataattctgatggttgtatttaacagattgtaggatt-agtt-------tttgagaatt 23539792  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    ||| | ||||||||||||||| |||||||||||    
T  23539791 aggttaaaagtgagaaattgatgattaattgat 23539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 20177985 - 20177907
Alignment:
Q  127 ttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 206  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| | |||| |||||| |||| ||||  |||||||    
T  20177985 ttaacaagt-taggattgaattagagaagttggaaaactagggttaatgagagagattgagaattagttgacgtagaatg 20177907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 20555981 - 20556062
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaatt 95  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||| ||||| |||||||||    
T  20555981 gagaaaaacccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgggactaacattcaatt 20556062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 17882657 - 17882737
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||| ||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  17882657 gagaaaaagccaagagaatggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 17882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 18343160 - 18343112
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  18343160 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 18343112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 19003582 - 19003502
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||||||||||||||||||| | || |||||  |||| |||||| ||   |||||||||||||| |||| ||||||||    
T  19003582 gagaaaaaaccaagagaagggaggacaacctagaaagctgcgattttcattgttaaggtaagggtgaaactaacattcaat 19003502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 18457686 - 18457615
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  18457686 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 18457615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 18820979 - 18821050
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  18820979 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 18821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 27572069 - 27572140
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| | ||||||||||||||| | |||||| |||| |||||| ||   |||||||||||||||||||    
T  27572069 gagaaaaagctaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgagacta 27572140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 29808027 - 29808098
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  29808027 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 29808098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 30675987 - 30676066
Alignment:
Q  15 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||||||||| ||| ||||    
T  30675987 agaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacatgcaat 30676066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 16198498 - 16198420
Alignment:
Q  16 gaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  16198498 gaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgtgactaacattcaat 16198420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 1540104 - 1540152
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||| | ||||||||    
T  1540104 gagtgctgcgattttcatctataaggtaagggtgagacaaacattcaat 1540152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 8055999 - 8055951
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  8055999 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 8055951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 8226719 - 8226767
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  8226719 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 8226767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 12743289 - 12743241
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  12743289 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 12743241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 18333785 - 18333833
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  18333785 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 18333833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 19858083 - 19858163
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || |  |||||||   |||||||||||||| ||||| ||||||||    
T  19858083 gagaaaaagccaagagaagggagaaagacctagaaagcggcaattttgagttataaggtaagggtgggactaacattcaat 19858163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 22783197 - 22783149
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  22783197 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 22783149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 22792418 - 22792458
Alignment:
Q  55 gattttgatccataaggtaagggtgagactagcattcaatt 95  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  22792418 gattttgaatcataaggtaagggtgagactaacattcaatt 22792458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 24423516 - 24423468
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  24423516 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 24423468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 26923638 - 26923686
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  26923638 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 26923686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 33862766 - 33862718
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  33862766 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 33862718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 33865247 - 33865199
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  33865247 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 33865199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 2279321 - 2279464
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2279321 taaggtaagggtgagactagcattcaattctattaatctatataattctgatagttgtatttaacaagtgtatgattgaattagagaagttggagaatta 2279420  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||    
T  2279421 gggttaaagagagaaattgaggagtaattgatgtagaacggtta 2279464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 12254995 - 12255122
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  12254995 taaggtaagggtgagactagcattcaattctattaatctgtatgattctgatagttataattaacaagtgtaggattgaattagagaagttggaaaatta 12255094  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| ||||||||||||||||||    
T  12255095 gggttaaagagagaaattgaggattaat 12255122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 15007649 - 15007779
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||| | |||||||||||||| |||||    
T  15007649 taaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aatta 15007747  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||||||||||||||||||    
T  15007748 gggttaaagtgagaaattgaggattaattgat 15007779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 12902338 - 12902178
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-att 148  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||  | |||||||  ||| ||||||||| ||||||||||||||||  ||    
T  12902338 gctgcgattttgatttataaggtaagggtgagactagcattcaattctattaagctatataattcggatggttgtatttgacaagtgtaggattgatttt 12902239  T
Q  149 agagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||| |||||| ||||    
T  12902238 agagaa-ttggagaattagggttaaggtgagaagttgaggattaattgatgtagaattgtta 12902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 16218918 - 16219061
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |   ||  ||||||||| |||||||||||||||||||||||||||||| || ||    
T  16218918 taaggtaagggtgagactagcattcaattctattattctatataactcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaacta 16219017  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | |||||||||||||||||||||| |||||||||||    
T  16219018 gggttaatgagagaaattgaggattaattgatgtagaatggtta 16219061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 9388865 - 9389029
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  || | ||||||||||||||||||||||||||||||||||||| | ||| |||    
T  9388865 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaattcttaaggtaagggtgagactagcattcaattctattaatctatatgatt 9388964  T
Q  114 ttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaattagggttaaagtga 178  Q
     |||| |||||||||| |||| |||||||| || ||||||||||| |||||||| |||||||||||    
T  9388965 ctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatta-ggttaaagtga 9389029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 22073836 - 22073708
Alignment:
Q  67 taaggtaagggtgagactagcatt-caattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||| |  | |||||||||||||  |||| | | |||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  22073836 taaggtaagggtgagactaactctgcaattctattaatcggtatgactctgatagttataattaacaagtgtaggattgaattagagaagttggaaaatt 22073737  T
Q  166 agggttaaagtgagaaattgaggattaat 194  Q
    |||||||| | ||||||||||||||||||    
T  22073736 agggttaatgagagaaattgaggattaat 22073708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 16057246 - 16057119
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | ||||||||||||  | ||||||| ||||  ||||||||| |||||||||||||| ||||||||||||||| |||||    
T  16057246 taaggtaagggtgagactaacttacaattctattaagctatataattctgatgattgtatttagcaagtgtaggattggattagagaagttggaaaatta 16057147  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| | |||||| |||||||||    
T  16057146 gggttaaagagtgaaatttaggattaat 16057119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 47832727 - 47832600
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||| ||||||| | ||||| |   ||  ||||||||| ||||| |||||||||||||||||||||||| |||||    
T  47832727 taaggtaagggtgagactaacattcaattttattaatctatataactcatatgattgtatttagcaagtataggattgaattagagaagttggaaaatta 47832628  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||| | ||||||||||||||||||    
T  47832627 gggttaatgagagaaattgaggattaat 47832600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 15440302 - 15440122
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    ||||||||  ||||||||||||| || | |||||| ||||  ||||  ||   ||||||||||||||||||||||||||||| ||||||  | ||| |||    
T  15440302 gagaaaaagtcaagagaagggaggaagacctagagagctgcaatttcaatttctaaggtaagggtgagactagcattcaattttattaacctatatgatt 15440203  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
       ||  ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| | | ||||||||||||||||    
T  15440202 catatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattaggattaatgagggaaattgaggattaat 15440122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 3563555 - 3563671
Alignment:
Q  57 ttttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagt 156  Q
    |||||||| |||||||||||||||||||| | | ||||||||||||| | | || || ||||  |  |||||| ||||||||||||||||||||||||||    
T  3563555 ttttgatctataaggtaagggtgagactaacttacaattctattaatctatttatttctgatgatcatatttagcaagtgtaggattgaattagagaagt 3563654  T
Q  157 tggagaattagggttaa 173  Q
     ||||||||||||||||    
T  3563655 cggagaattagggttaa 3563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 14037169 - 14037040
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| ||  |||||||||    
T  14037169 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtatttaacaagtgtaggattagttttaga-aaaatggagaatt 14037072  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | |||||||||||| |||||| |||||||||||    
T  14037071 a-ggttaaagtgaggaattgatgattaattgat 14037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 14347199 - 14347070
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| |||| |||||||||||||||||||||||| |  ||||| ||  |||||||||    
T  14347199 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtatttaacaagtgtaggattagttttaga-aaaatggagaatt 14347102  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | |||||||||||| |||||| |||||||||||    
T  14347101 a-ggttaaagtgaggaattgatgattaattgat 14347070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 15141179 - 15141358
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||||||||||||||||||||| | ||||||||||  |||||| | |   ||||||||||||||||||| | |  |||||||||||  | | ||||    
T  15141179 gagaaaaaaccaagagaagggagaaaga-ctagagtgctacgattttcactttctaaggtaagggtgagactaacttataattctattaagctatgtaat 15141277  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 193  Q
    | ||||  |  |||||| ||||||||||||||||||| |||||||||| || ||||||||| | |||||||||| ||||||    
T  15141278 tctgatgatcatatttagcaagtgtaggattgaattaaagaagttggaaaactagggttaatgagagaaattgatgattaa 15141358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 14045741 - 14045612
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    |||||||| |||||||||||||||||||||||||||  | | ||||| |||| |||||| ||||||||||||||||| |  ||||| || ||||||||||    
T  14045741 taaggtaaaggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtacttaacaagtgtaggattagttttaga-aaattggagaatt 14045644  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | |||||||||||| |||||| |||||||||||    
T  14045643 a-ggttaaagtgaggaattgatgattaattgat 14045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 14355771 - 14355642
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    |||||||| |||||||||||||||||||||||||||  | | ||||| |||| |||||| ||||||||||||||||| |  ||||| || ||||||||||    
T  14355771 taaggtaaaggtgagactagcattcaattctattaa-gtctgtaattctgatggttgtacttaacaagtgtaggattagttttaga-aaattggagaatt 14355674  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | |||||||||||| |||||| |||||||||||    
T  14355673 a-ggttaaagtgaggaattgatgattaattgat 14355642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 16324921 - 16324793
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | || || ||||  ||  ||||||||||||||||||| | ||||||||||||||||||||    
T  16324921 taaggtaagggtgagactagcattcaatcttattaag-tctgtacttctgatgatta-atttaacaagtgtaggattaatttagagaagttggagaatta 16324824  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
     |||||||||||| |||||| |||||||||||    
T  16324823 -ggttaaagtgaggaattgatgattaattgat 16324793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 15117439 - 15117311
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | || || ||||  ||  ||||||||||||||||||| | ||||||||||||||||||||    
T  15117439 taaggtaagggtgagactagcattcaatcttattaag-tctgtacttctgatgatta-atttaacaagtgtaggattaatttagagaagttggagaatta 15117342  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
     |||||||||||| |||| | |||||||||||    
T  15117341 -ggttaaagtgaggaatttatgattaattgat 15117311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 16496345 - 16496215
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    |||| |||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  16496345 taagataagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 16496248  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||| ||||||||||   |||||||||||    
T  16496247 agggttaaggtgagaaatttgagattaattgat 16496215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 18304700 - 18304573
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| || |    
T  18304700 taaggtaagggtgagactagcatacaattctattaat-tctgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaact 18304602  T
Q  166 agggttaaagtgaga-aattgaggattaa 193  Q
    |||||||| | |||| |||||| ||||||    
T  18304601 agggttaatgagagagaattgatgattaa 18304573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 48274606 - 48274526
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  |||||||||||||   |||||||||||||||||||| ||||||||    
T  48274606 gagaaaaagccaagagaagggagaaagacctagaaagctgtgattttgagttataaggtaagggtgagactaacattcaat 48274526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 15113913 - 15113785
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | || || ||||  ||  |||||||||||||| |||| | ||| ||||||||||||||||    
T  15113913 taaggtaagggtgagactagcattcaatcttattaag-tctgtacttctgatgatta-atttaacaagtgtatgattaatttaaagaagttggagaatta 15113816  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
     |||||||||||| |||||| |||||||||||    
T  15113815 -ggttaaagtgaggaattgatgattaattgat 15113785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 9176835 - 9176965
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||| ||||||  | | ||||| ||||| ||  ||||||||||||||||||| |  |||||||| || ||| |||    
T  9176835 taaggtaagggtgagactagcattcaattttattaa-gtctgtaattctgataattaaatttaacaagtgtaggattagttttagagaa-tttgaggatt 9176932  T
Q  166 agggttaa-agtgagaaattgaggattaattgat 198  Q
    |||||||| |||||| |||||| |||||||||||    
T  9176933 agggttaagagtgag-aattgatgattaattgat 9176965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 1867233 - 1867362
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||  ||||||| ||||||||  ||||||  | | ||||| ||||||||||||||||||||||||||||| |  ||||| || |||||||||     
T  1867233 taaggtaaggacgagactaacattcaatcttattaag-tctgtaattctgatagttgtatttaacaagtgtaggattagttttagacaa-ttggagaatc 1867330  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | |||||||||||| |||||| |||||||||||    
T  1867331 a-ggttaaagtgaggaattgatgattaattgat 1867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 9750751 - 9750878
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||| ||| ||||||||||||| | | |||||    | |||||| |||||||| ||||| |||| ||||||||||||||| || |    
T  9750751 taaggtaagggtgagactaccatacaattctattaat-tctgtaattcaattggttgtaattaacaagttgtagaattggattagagaagttggaaaact 9750849  T
Q  166 agggttaaagtgaga-aattgaggattaa 193  Q
    |||||||| | |||| |||||| ||||||    
T  9750850 agggttaatgagagagaattgatgattaa 9750878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 5294567 - 5294606
Alignment:
Q  132 aagtgtaggattgaattagagaagttggagaattagggtta 172  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5294567 aagtgtaggattgaattagagaagttgg-gaattagggtta 5294606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 5295740 - 5295779
Alignment:
Q  132 aagtgtaggattgaattagagaagttggagaattagggtta 172  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5295740 aagtgtaggattgaattagagaagttgg-gaattagggtta 5295779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 5296913 - 5296952
Alignment:
Q  132 aagtgtaggattgaattagagaagttggagaattagggtta 172  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  5296913 aagtgtaggattgaattagagaagttgg-gaattagggtta 5296952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 9944957 - 9945037
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||  ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  9944957 gagaaaaggccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 9945037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 14317463 - 14317543
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||| ||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  14317463 gagaaaaagccaagagaatggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 14317543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 17180476 - 17180556
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||| |  | | | ||||||||||| ||||||||    ||||||||||||||||||||||||||||    
T  17180476 gagaaaaagccaagagaagagcaagagacctagagtgctgcgattttgagtattaaggtaagggtgagactagcattcaat 17180556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 26355173 - 26355221
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  26355173 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 26355221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 26357625 - 26357673
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  26357625 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 26357673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 17016597 - 17016632
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaa 102  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17016597 taaggtaagggtgagactagcattcaattctcttaa 17016632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 17061130 - 17061201
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  17061130 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 17061201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 44117455 - 44117384
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  44117455 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 44117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 20219479 - 20219524
Alignment:
Q  159 gagaattagggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  20219479 gagaattagg-ttaaagtgagaaattgatgattaattgatgtagaat 20219524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 28504476 - 28504565
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||| |||||||| |  |||| ||||||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  28504476 gagaaaaagccaagaggagggagaagac-ctaggagtgctgcgattttcatctataaggtaagggtgagactaactttgcaattctattaa 28504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 44015147 - 44015058
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||||||||||||||||| |  | | | ||||||||||| ||||||||    ||||||||||||||||||| | || ||||||||||||    
T  44015147 gagaaaaaaccaagagaagagcaagagacctagagtgctgcgattttgagtattaaggtaagggtgagactaactttgcaattctattaa 44015058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 457292 - 457244
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  457292 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 11392495 - 11392543
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  11392495 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 11392543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 14948312 - 14948360
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14948312 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14948360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 15375906 - 15375954
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  15375906 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 15375954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 16233492 - 16233444
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  16233492 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 16233444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 16411029 - 16410981
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  16411029 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 16410981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 18628567 - 18628487
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| || || ||||||||    
T  18628567 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgggaataacattcaat 18628487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 18641273 - 18641193
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| || || ||||||||    
T  18641273 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgggaataacattcaat 18641193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 20384316 - 20384364
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  20384316 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 20384364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 24703193 - 24703145
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  24703193 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 24703145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 24705640 - 24705592
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  24705640 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 24705592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 27217830 - 27217782
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  27217830 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 27217782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 38897496 - 38897572
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt 90  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||| ||||||||||| ||||    
T  38897496 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaggggtgagactaacatt 38897572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 26844 - 26987
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  26844 taaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtaagattaaattagagaagttggagaatta 26943  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||| |||||||||||||||||||||||||  |||||||||||    
T  26944 gggtttaagtgagaaattgaggattaattgacgtagaatggtta 26987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 13699 - 13895
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| ||||||||||| ||||  |  ||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||| | ||| |||    
T  13699 gagaaaaagccaagagaaggcagaagcacttagagagctgcgattttcattgttaaggtaagggtgagactagcattcaattctattaatctatatgatt 13798  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
     ||||  || |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  13799 ctgatgattttatttagcaagtgtaggattgaattagagaagttggagaattagggtttaagagagaaattgaggattaattgatgtagaatggtta 13895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 20499610 - 20499414
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| || | | | | |||| ||||||||||| |    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  20499610 gagaaaaagccaagagaagagaaagagaccaagagagctgtgattttcaattctaaggtaagggtgagactagcattcaattctattaatctatataatt 20499511  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
     ||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  20499510 ctgatgattgtatttagcaagtgtaggattgaattagagaagttggagaattagggttaaggtgagaatttgagggttaattgatgtagaatggtta 20499414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 982569 - 982722
Alignment:
Q  57 ttttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagt 156  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||||   ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  982569 ttttgattcttaaggtaagggtgagactagcattcaattatattaatcaatataattctgatggttgtatttaacaagtgtaggattgaattagagaagt 982668  T
Q  157 tggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||||||||||||| ||||| ||||||||||||||| |  |||||||||||    
T  982669 tggagaattagggttaaggtgaggaattgaggattaattaacgtagaatggtta 982722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 21287140 - 21287013
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||    
T  21287140 taaggtaagggtgagactagcattcaattctattaatcagtatgattatgatagttataattaacaagtgtaggattgaattagagaagttggaaaatta 21287041  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| ||||||||||||||||||    
T  21287040 gggttaaagagagaaattgaggattaat 21287013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 38854400 - 38854592
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| ||||||||||| ||||| | |||||  |||| |||||| ||   ||||||||||||||||||||||||||||||||||| | | |||||||    
T  38854400 gagaaaaagccaagagaaggaagaaagacctagaaagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattattctatataatt 38854499  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatg 206  Q
       ||  ||||||||| |||||||| ||||||||||||||||||||| || ||||||||| | ||| ||||||| |||||||||| |||||||    
T  38854500 catatgattgtatttagcaagtgtaagattgaattagagaagttggaaaactagggttaatgagaggaattgagtattaattgatgtagaatg 38854592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 13507232 - 13507362
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||| ||||||||||||||||||||||||||||||    
T  13507232 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtataggattgaattagagaagttggagaatta 13507330  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||||||||||||||||||    
T  13507331 gggttaaagtgagaaattgaggattaattgat 13507362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 13596764 - 13596894
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||| ||||||||||||||||||||||||||||||    
T  13596764 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtataggattgaattagagaagttggagaatta 13596862  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||||||||||||||||||    
T  13596863 gggttaaagtgagaaattgaggattaattgat 13596894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 7464904 - 7465031
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||| ||||||  | ||||||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  7464904 taaggtaagggtgagactaacattcaattttattaacctatataattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 7465003  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||| | ||||||||||| ||||||    
T  7465004 gggttaatgagagaaattgagaattaat 7465031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 17266144 - 17266280
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||  |||||| || | ||||| |||| |||||||||||||||||||||||||  |||||||||||||| |||||    
T  17266144 taaggtaagggtgagactaacattcaatcttattaa-atctgtaattctgatggttgtatttaacaagtgtaggattgttttagagaagttgga-aatta 17266241  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    |||||||||||||||||||| |||| |||||| ||||||    
T  17266242 gggttaaagtgagaaattgatgatttattgatgtagaat 17266280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 6521304 - 6521144
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||||||  | ||| |||   ||  ||||||||| |||||||||||||||||||    
T  6521304 gctgcgattttgattattaaggtaagggtgagactagcattcaattctattaacctatatgattcatatgattgtatttagcaagtgtaggattgaatta 6521205  T
Q  150 gagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    || |||||||| || ||||||||| |  || |||||||||||||||||| |||||||||||    
T  6521204 gaaaagttggaaaactagggttaatgaaaggaattgaggattaattgatgtagaatggtta 6521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 21697367 - 21697493
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 117  Q
    |||||||||||||||||||||| | |||||| ||||  ||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  21697367 aaaaaccaagagaagggagaaacacctagagagctgccatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 21697466  T
Q  118 tagttgtatttaacaagtgtaggattg 144  Q
    |  || |||||||||||||||||||||    
T  21697467 tgattttatttaacaagtgtaggattg 21697493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 17611295 - 17611399
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||||| ||||  || |||||| |||||||||||||||||||||||||||||| |||||    
T  17611295 taaggtaaggttgagactagcattcaattatattaatctatataattctgatgattttatttagcaagtgtaggattgaattagagaagttgga-aatta 17611393  T
Q  167 gggtta 172  Q
    ||||||    
T  17611394 gggtta 17611399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 22966906 - 22966829
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattg 144  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || |||||||||||||||||||||    
T  22966906 taaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttaacaagtgtaggattg 22966829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 28648222 - 28648381
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| ||||||||||||| ||| | ||||   |||| |||||| |||  |||||||||||||||||||| | | ||||||||||||| | |||| |    
T  28648222 gagaaaaagccaagagaaggga-aaagacctaggaagctgcgattttcatcttataaggtaagggtgagactaacttacaattctattaatctatatact 28648320  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 173  Q
    | ||||  |  |||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  28648321 tctgatgatcatatttagcaagtgtatgattgaattagagaagtcggagaattagggttaa 28648381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 14102352 - 14102480
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||| | |||| |||||||||||||||    
T  14102352 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatta-atttaacaagtgtaggattaatttagcgaagttggagaatta 14102449  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
     |||||||||||| |||||| |||||||||||    
T  14102450 -ggttaaagtgaggaattgatgattaattgat 14102480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 167
Target Start/End: Complemental strand, 15071423 - 15071302
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga 145  Q
    |||||||| ||||||||   |||||||||||||||||||| | | ||||||||||||| |  |||||| ||||  ||| ||||| |||||||| ||||||    
T  15071423 gagtgctgcgattttgagttataaggtaagggtgagactaacttacaattctattaatctaaataattctgatgattgcatttagcaagtgtacgattga 15071324  T
Q  146 attagagaagttggagaattag 167  Q
    |||||| | |||||||||||||    
T  15071323 attagaaaggttggagaattag 15071302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 5609843 - 5609954
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| ||| |||| |||||||||| |||| ||||| || || ||||||||||| || ||||    
T  5609843 taaggtaagggtgagactagcattcaattttattaatctatatgattctgatggttgtatttagcaagagtagggttggatttagagaagtttgaaaatt 5609942  T
Q  166 agggttaaagtga 178  Q
    | |||||||||||    
T  5609943 a-ggttaaagtga 5609954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 22627672 - 22627548
Alignment:
Q  50 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 148  Q
    ||||||||||| |||| |||||||||||||| ||||| | | || || ||||||| | ||||||| ||||  |  |||||| ||||| ||||||||||||    
T  22627672 gctgtgattttcatcctataaggtaagggtgggactaacttacagttttattaatctatataattctgatgatcatatttagcaagtataggattgaatt 22627573  T
Q  149 agagaagttggagaattagggttaa 173  Q
    |||||||| ||||||||||||||||    
T  22627572 agagaagtcggagaattagggttaa 22627548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 19936187 - 19936275
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 102  Q
    |||||||| ||||||||||||||||| | ||||   |||| |||||| ||   ||||||||||||||||||||||||||||||||||||    
T  19936187 gagaaaaagccaagagaagggagaaagacctaggaagctgcgatttttattattaaggtaagggtgagactagcattcaattctattaa 19936275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 17438664 - 17438794
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagaga-agttggagaat 164  Q
    |||||||||| |||||||||||||||||||||||||  | ||| ||| |||| || |||||||||||| ||||||||| | || | || | || ||||||    
T  17438664 taaggtaaggttgagactagcattcaattctattaa-gtctatgattctgatggtcgtatttaacaagttgtaggatt-agtttgtgagaatttgagaat 17438761  T
Q  165 tagggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||||||||||||||||| |||||||||||    
T  17438762 ta-ggttaaagtgagaaattgatgattaattgat 17438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 19154012 - 19154142
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 164  Q
    |||||||| |||| ||||||||||||||||||||||  | ||| ||| |||||||||||||||||| | ||||||||| |  || ||||| || || |||    
T  19154012 taaggtaacggtgggactagcattcaattctattaa-gtttatgattctgatagttgtatttaacaggttgtaggattagtttttgagaa-tttgaaaat 19154109  T
Q  165 tagggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||||||||||||||||| |||||||||||    
T  19154110 ta-ggttaaagtgagaaattgatgattaattgat 19154142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 19800629 - 19800756
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 165  Q
    ||||||||||||||||||| ||||||||||||||||| |   |||||    | |||||| |||||||||||||||||||  |||||||| || |||||||    
T  19800629 taaggtaagggtgagactaacattcaattctattaat-tccgtaattcaattggttgtaattaacaagtgtaggattgattttagagaa-tttgagaatt 19800726  T
Q  166 agggttaaagtga-gaaattgaggattaat 194  Q
    |||||||||| || |||||||| |||||||    
T  19800727 agggttaaagagaggaaattgatgattaat 19800756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 22365606 - 22365477
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||||| || |||||| ||| ||||||    
T  22365606 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtaggattgattttagagaatttg-agaatt 22365509  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | | ||||||||||||||||  |||||||||||    
T  22365508 aag-ttaaagtgagaaattggtgattaattgat 22365477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 40492028 - 40492142
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||||||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  40492028 taaggtaagggtgagactagcattcaatcttattaa-gtctgtaattttgatgattaaatttaacaagtgtaggattaattttagagaa-tttgagaatt 40492125  T
Q  166 agggttaa-agtgagaa 181  Q
    |||||||| ||||||||    
T  40492126 agggttaagagtgagaa 40492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 23407354 - 23407266
Alignment:
Q  15 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||||| ||||||||||||||||| | |||||| |||| |||||| |||  |||||||||||||||||||| | || ||||||||||||    
T  23407354 agaaaaagccaagagaagggagaaagacctagag-gctgcgattttcatcttataaggtaagggtgagactaactttgcaattctattaa 23407266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 22002724 - 22002676
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  22002724 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 22002676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 20532536 - 20532571
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaa 102  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20532536 taaggtaagggtgagactaacattcaattctattaa 20532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 39834544 - 39834499
Alignment:
Q  152 gaagttggagaattagggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  39834544 gaagttggagaattagg-ttaaagtgaggaattgatgattaattgat 39834499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 22526478 - 22526433
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaatt 95  Q
    |||| |||||||||  |||||||||||||||||||| |||||||||    
T  22526478 gctgcgattttgatttataaggtaagggtgagactaacattcaatt 22526433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 1326392 - 1326472
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||  | |||||| ||||  ||||| ||   ||||||||||||| ||||| ||||||||    
T  1326392 gagaaaaagccaagagaagggagaagcacctagagagctgcaattttcattgttaaggtaagggtgggactaacattcaat 1326472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 1485371 - 1485323
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  1485371 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 1485323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 2418003 - 2418031
Alignment:
Q  67 taaggtaagggtgagactagcattcaatt 95  Q
    |||||||||||||||||||||||||||||    
T  2418003 taaggtaagggtgagactagcattcaatt 2418031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 4484249 - 4484201
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  4484249 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 4484201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 5852486 - 5852534
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  5852486 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 5852534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 14408637 - 14408685
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14408637 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14408685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 14824745 - 14824697
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14824745 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20045356 - 20045436
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| |  ||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  20045356 gagaaaaagccaagagaagggagaaagacttagaaagcggcgattttgaattataaggtaagggtgggactaacattcaat 20045436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 28398552 - 28398512
Alignment:
Q  55 gattttgatccataaggtaagggtgagactagcattcaatt 95  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  28398552 gattttgaatcataaggtaagggtgagactaacattcaatt 28398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 12287344 - 12287491
Alignment:
Q  57 ttttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagt 156  Q
    ||||||| | ||||||||||||||||||  ||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  12287344 ttttgattcttaaggtaagggtgagactgacattcaattctattaatctgtataattctgatggttgtatttaacaagtgtatgattgaattagagaagt 12287443  T
Q  157 tggagaattagggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  12287444 tggagaattagagttaaagagagaaattgaggattaattgatgtagaa 12287491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 52242365 - 52242545
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| || | ||| |||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||| ||||| |||    
T  52242365 gagaaaaagccaagagaagagaaagaaacctagagagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattaatctgtatgatt 52242464  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
     |||| ||| || |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  52242465 ctgatggttataattaacaagtgtatgattgaattagagaagttggaaaattagggttaaagagagaaattgaggattaat 52242545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 46643788 - 46643652
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||| || |||||||||||||||||||||||||||| |||||||||||    
T  46643788 taaggtatgggtgagactagcattcaattctattaaactgtatgattttgatagttataattaacaagtgtaggattgaattagagaaattggagaatta 46643689  T
Q  167 gggttaaagtgagaaattgaggattaattgatataga 203  Q
    ||||| ||| |||||||||||||||||||||| ||||    
T  46643688 gggtttaagagagaaattgaggattaattgatgtaga 46643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 11023 - 11166
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  11023 taaggtaagggtgagactagcattcaattgtattaatctatataattctgatgattgtatttagcaagtgtaggattgaattacagaagttggagaatta 11122  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||    
T  11123 gggtttaagagagaaattgaggattaattgatgtagaacggtta 11166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 15100300 - 15100104
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattt-tgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||||||| || | |||||| |||| ||||| |||| | ||||||||||||||| |||||| |||||| |||||||  |||| ||    
T  15100300 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttctgattc-taaggtaagggtgaggctagcaatcaattttattaatcggtatgat 15100202  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    | |||| |||  |||||||| ||||||||||||||||||| ||||||| || ||||||||| | |  ||||||||||||||||||| |||||||||||    
T  15100201 tctgatggttaaatttaacatgtgtaggattgaattagaggagttggaaaactagggttaatgaggaaaattgaggattaattgatgtagaatggtta 15100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 39705433 - 39705614
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctaga-gtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    ||||||||||||||||||| || |||   ||||| | |||| |||||||||   |||||||||||||||||||||||||| ||||||||| || ||  ||    
T  39705433 gagaaaaaaccaagagaagagaaaaagtcctagaagagctgcgattttgattattaaggtaagggtgagactagcattcatttctattaacatatacgat 39705532  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    |   ||  ||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  39705533 tcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattagggttaatgagagaaattgagaattaat 39705614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 43197840 - 43197967
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |   ||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  43197840 taaggtaagggtgagactagcattcaattctattattctatataactcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 43197939  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    |||||||   ||||||||||||||||||    
T  43197940 gggttaataagagaaattgaggattaat 43197967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 15374386 - 15374280
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  15374386 taaggtaagggtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 15374288  T
Q  167 gggttaaa 174  Q
    ||||||||    
T  15374287 gggttaaa 15374280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 23802354 - 23802433
Alignment:
Q  15 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23802354 agaaaaagccaagagaagggagaaaaacctagagtgctgcgattttgatccataaggtaagggtgagactaacattcaat 23802433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 53081303 - 53081444
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  |||||||||||||| |||| | |||||||||||||| |||||    
T  53081303 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtatgattaatttagagaagttgga-aatta 53081400  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||    
T  53081401 gggttaaagtgagaaattgatgattaattgatgtagaattgtta 53081444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 3838223 - 3838097
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 117  Q
    |||| ||||||||||||||||| | |||||| | || |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  3838223 aaaagccaagagaagggagaaacacctagagagttgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 3838124  T
Q  118 tagttgtatttaacaagtgtaggattg 144  Q
    |  || |||||||||||||||||||||    
T  3838123 tgattttatttaacaagtgtaggattg 3838097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 15368585 - 15368481
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  15368585 taaggtaagggtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 15368487  T
Q  167 gggtta 172  Q
    ||||||    
T  15368486 gggtta 15368481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 15372094 - 15371990
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  15372094 taaggtaagggtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 15371996  T
Q  167 gggtta 172  Q
    ||||||    
T  15371995 gggtta 15371990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 20150970 - 20150844
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 117  Q
    |||| ||||||||||||||||    |||||| |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  20150970 aaaagccaagagaagggagaaccccctagagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctga 20150871  T
Q  118 tagttgtatttaacaagtgtaggattg 144  Q
    |  || |||||||||||||||||||||    
T  20150870 tgattttatttaacaagtgtaggattg 20150844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 16224434 - 16224330
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||| ||||||| ||||||||||||||||||| | ||||||| ||||  || |||||| |||||||| |||||||||||||||||||| ||||||    
T  16224434 taaggtaagagtgagaccagcattcaattctattaatctatataattctgatgattttatttagcaagtgtatgattgaattagagaagttgg-gaatta 16224336  T
Q  167 gggtta 172  Q
    ||||||    
T  16224335 gggtta 16224330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 15191235 - 15191124
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    |||||||||||| |||||||||||||||||||||||| | ||| ||| |||| |||||||||| |||| |||||||| || ||||||||||| |||||||    
T  15191235 taaggtaagggtaagactagcattcaattctattaatctatatgattctgatggttgtatttagcaagagtaggattggatttagagaagtttgagaatt 15191136  T
Q  166 agggttaaagtga 178  Q
    | |||||||||||    
T  15191135 a-ggttaaagtga 15191124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 15464182 - 15464268
Alignment:
Q  118 tagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    |||||||||||||||| ||||||||| ||||||| ||||| || ||||||||||||||  ||||||||||||||||||||| |||||    
T  15464182 tagttgtatttaacaaatgtaggattaaattagaaaagtttgaaaattagggttaaagatagaaattgaggattaattgatgtagaa 15464268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 16376707 - 16376829
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||| |||||||||||||| || || | | ||||| ||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  16376707 gctgcgattttgatctataaggtaagggtgggagtaacttacaatt-tattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 16376805  T
Q  150 gagaagttggagaattagggttaa 173  Q
    ||||||| ||||||||||||||||    
T  16376806 gagaagtcggagaattagggttaa 16376829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 15867817 - 15868000
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||| ||||| ||   |||||| |||| |||||  || | |||||||||||||||||||||||||||||||| |||| | |||||||    
T  15867817 gagaaaaagccaagagaggggaggaaggcctagagagctgcgatttcaattcttaaggtaagggtgagactagcattcaattctaataat-tctataatt 15867915  T
Q  114 ttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 198  Q
          |||||| ||||||||||| |||||||  |||||||| || ||||||||||||||||||||| ||||   |||||||||||    
T  15867916 caatcggttgtaattaacaagtgttggattgattttagagaa-tttgagaattagggttaaagtgaggaatttgagattaattgat 15868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 32852370 - 32852240
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||      |||||| |||||||||||| |||| |  |||||||| || |||||||    
T  32852370 taaggtaagggtgagactagcattcaattctattaat-tctgtaattcaatcggttgtaattaacaagtgtatgattggttttagagaa-tttgagaatt 32852273  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||||||||||||||  ||||||||||||    
T  32852272 agagttaaagtgagaaatttgggattaattgat 32852240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 54797833 - 54797913
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || ||||||||||   |||||||||||||||||||| ||||||||    
T  54797833 gagaaaaagccaagagaagggagaaagacctagaaagcggtgattttgagttataaggtaagggtgagactaacattcaat 54797913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 6191408 - 6191334
Alignment:
Q  11 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    ||||||||||||||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  6191408 agagagaaaaaaccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 6191334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 14969974 - 14970054
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||||||||| || |||||  |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  14969974 gagaaaaagccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacattcaat 14970054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 44103182 - 44103111
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||| | |||||| |||| |||||| ||   |||||||||||||||||||    
T  44103182 gagaaaaagccaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgagacta 44103111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 21817874 - 21817960
Alignment:
Q  17 aaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||| ||||||||||||||||| | |||||| |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  21817874 aaaaagccaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 21817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 22637406 - 22637317
Alignment:
Q  15 agaaaaaaccaagagaagggagaaaaatctaga-gtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||||| ||||||||||||||||  | | ||| | |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  22637406 agaaaaagccaagagaagggagaaccaccaagaagggctgcgattttgatctataaggtaagggtgagactaactttccaattctattaa 22637317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 7640379 - 7640427
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  7640379 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 7640427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 18238773 - 18238853
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||| ||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  18238773 gagaaaaagccaagagaatggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 18238853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 44616260 - 44616212
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  44616260 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 44616212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 50221531 - 50221579
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  50221531 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 50221579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 17334249 - 17334214
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaa 102  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17334249 taaggtaagggtgagactagcattcaattctcttaa 17334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 14039593 - 14039503
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| |||||||||| |  ||| | |||| || |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  14039593 gagaaaaagccaagagaagagcaaaagacctaggagagctgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 14039503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 16597588 - 16597499
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||| |||||||| |  |||| ||||||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  16597588 gagaaaaagccaagaggagggagaagac-ctaggagtgctgcgattttcatctataaggtaagggtgagactaaccttgcaattctattaa 16597499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 3097546 - 3097493
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagc-attcaattctattaa 102  Q
    |||| |||||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  3097546 gctgcgattttcatcaataaggtaagggtgagactagcttttcaattctattaa 3097493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 7799598 - 7799509
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||| |||||| || |||||  |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  7799598 gagaaaaagccaagagaatggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 7799509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 1836713 - 1836761
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  1836713 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 1836761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 12032964 - 12033012
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  12032964 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 12033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 14717913 - 14717961
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14717913 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14717961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 15117545 - 15117593
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  15117545 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 15117593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 19617343 - 19617422
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||| | | |||||  ||||||||||| ||   ||||||||||||| ||||| ||||||||    
T  19617343 gagaaaaagccaagagaagggagagagacctagaa-gctgtgattttcattgttaaggtaagggtgggactaacattcaat 19617422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 26790319 - 26790279
Alignment:
Q  55 gattttgatccataaggtaagggtgagactagcattcaatt 95  Q
    ||||||||  ||||||||||||||||||||| |||||||||    
T  26790319 gattttgaatcataaggtaagggtgagactaacattcaatt 26790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 29268325 - 29268277
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29268325 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29268277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 3854 - 4047
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| ||||||||||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||  | ||| |||    
T  3854 gagaaaaagccaagagaagggagaaagacctagagtgttgcgattttgatctataaggtaagggtgagactagcattcaattctattaacctatatgatt 3953  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatgg 207  Q
       ||  |||||||||||||||||||||||||||||||||||||||| || ||||||| | | ||| |||||||||||||||||| || |||||    
T  3954 catatgattgtatttaacaagtgtaggattgaattagagaagttggaaaactagggttcatgagaggaattgaggattaattgatgtaaaatgg 4047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 20026072 - 20026215
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| ||||  ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  20026072 taaggtaagggtgagactagcattcaattctattaatctatatgattctgatgattgtatttagcaagtgtagaattgaattagagaagttggagaatta 20026171  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||    
T  20026172 gggttaaggtgagaatttgaggattaattgatgtagaatggtta 20026215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 26011183 - 26011363
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| || |   | |||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||| ||||| |||    
T  26011183 gagaaaaatccaagagaagagaaagtgacctagagagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattaatctgtatgatt 26011282  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
     |||||||| || |||||||||||||||||||||||||||||||| | ||||||| || | | ||||||||||||||||||    
T  26011283 ctgatagttataattaacaagtgtaggattgaattagagaagttgaaaaattaggatttatgagagaaattgaggattaat 26011363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 22145021 - 22144841
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttg-atccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||| |||||  | |||||| |||| ||||||  || | ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  22145021 gagaaaaagccaagagaagagagaagcacctagagagctgcgattttttattc-taaggtaagggtgagactagcattcaattctattaatctgtatgat 22144923  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    | |||||||| || |||||| ||||| |||| |||||||||||||||| |||||||||| ||| ||||||||||| ||||||    
T  22144922 tctgatagttataattaacacgtgtacgattaaattagagaagttggaaaattagggtttaagagagaaattgagaattaat 22144841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 22177347 - 22177488
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||| | |||||||||||||| |||||    
T  22177347 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtaggattaatttagagaagttgga-aatta 22177444  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    || ||||||||||||||||| ||||||||||| |||||| ||||    
T  22177445 ggtttaaagtgagaaattgatgattaattgatgtagaattgtta 22177488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 21328724 - 21328849
Alignment:
Q  69 aggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagg 168  Q
    |||||| ||||||||||||||||||||||||| |  ||||||| |   ||  ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  21328724 aggtaaaggtgagactagcattcaattctatttagttgtataactcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattagg 21328823  T
Q  169 gttaaagtgagaaattgaggattaat 194  Q
     |||| | ||||||||||| ||||||    
T  21328824 tttaatgagagaaattgagaattaat 21328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 24068364 - 24068247
Alignment:
Q  28 agaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatt 127  Q
    |||||||||||| | |||||| |||| |||||   || |||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || ||||    
T  24068364 agaagggagaaacacctagagagctgcgatttcattctataaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatt 24068265  T
Q  128 taacaagtgtaggattga 145  Q
    ||||||||||||||||||    
T  24068264 taacaagtgtaggattga 24068247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 21740745 - 21740888
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||| |||||| || ||||  |||| ||| |||| |||  ||||||||||||||||||||||| |||| ||||||| ||  |    
T  21740745 taaggtaagggtgagactagcaatcaattttactaatcagtatgattctgatggttaaatttaacaagtgtaggattgaatgagaggagttggaaaacaa 21740844  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | |  |||||||||||||||| || |||||||||||    
T  21740845 gggttaatgaggaaaattgaggattaattaatgtagaatggtta 21740888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 5888390 - 5888487
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaa 163  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||| |||| |||||||| || ||||||||||| |||||    
T  5888390 taaggtaagggtgagactagcattcaattctattaatctatatgattttgatggttgtatttagcaagagtaggattggatttagagaagtttgagaa 5888487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 9078889 - 9078765
Alignment:
Q  50 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 148  Q
    |||| |||||| |||| |||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||| |||||||    
T  9078889 gctgcgattttcatcctataaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggtttgaatt 9078790  T
Q  149 agagaagttggagaattagggttaa 173  Q
    |||||||| ||||||||||||||||    
T  9078789 agagaagtcggagaattagggttaa 9078765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 24530107 - 24529984
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | | ||| | ||||  |  |||||  |||||||||||||||||||    
T  24530107 gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatgtaagtctgatgatcatatttggcaagtgtaggattgaatta 24530008  T
Q  150 gagaagttggagaattagggttaa 173  Q
    ||||||| ||||||||||||||||    
T  24530007 gagaagtcggagaattagggttaa 24529984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 27988105 - 27988213
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||||||||||  | | ||||| |||| |||  ||||||||||||||||||| | |||||||||| ||| |||||    
T  27988105 taaggtaagggtgagactaacattcaattctattaa-gtctgtaattctgatggttaaatttaacaagtgtaggattaatttagagaagtggga-aatta 27988202  T
Q  167 gggttaaagtg 177  Q
    |||||||||||    
T  27988203 gggttaaagtg 27988213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 36315496 - 36315366
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  36315496 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 36315399  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||| ||||||||||   |||||||||||    
T  36315398 agggttaaggtgagaaatttgagattaattgat 36315366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 21870803 - 21870929
Alignment:
Q  68 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||     ||||||| |||||||||||||||||||  |||||||| || ||||||||    
T  21870803 aaggtaagggtgagactagcattcaattctactaat-tctgtaattcaatcagttgtaattaacaagtgtaggattgattttagagaa-tttgagaatta 21870900  T
Q  167 gggttaaagtga-gaaattgaggattaat 194  Q
    ||||||||| || |||||||| |||||||    
T  21870901 gggttaaagagaggaaattgatgattaat 21870929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 21875083 - 21875209
Alignment:
Q  68 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||     ||||||| |||||||||||||||||||  |||||||| || ||||||||    
T  21875083 aaggtaagggtgagactagcattcaattctactaat-tctgtaattcaatcagttgtaattaacaagtgtaggattgattttagagaa-tttgagaatta 21875180  T
Q  167 gggttaaagtga-gaaattgaggattaat 194  Q
    ||||||||| || |||||||| |||||||    
T  21875181 gggttaaagagaggaaattgatgattaat 21875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 22958712 - 22958797
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||| ||||||||||||||||||| ||||||||||| |||||| ||   |||||||||| |||||||| | || ||||||||||||    
T  22958712 aaaagccaagagaagggagaaaaacctagagtgctgcgattttcattgttaaggtaaggttgagactaactttgcaattctattaa 22958797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 2153899 - 2153979
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||| |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  2153899 gagaaaaagccaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgggactaacattcaat 2153979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 263961 - 264009
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  263961 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 264009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 10732130 - 10732178
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  10732130 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 10732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20765177 - 20765257
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||| ||| | |||||  || ||||||||||   ||||||||||||||||||||  |||||||    
T  20765177 gagaaaaagccaagagaagggaaaaagacctagatagcggtgattttgagttataaggtaagggtgagactaaaattcaat 20765257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 22413190 - 22413110
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | || ||| |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  22413190 gagaaaaagccaagagaagggagaaacacctggagagctgcgattttcattgttaaggtaagggtgggactaacattcaat 22413110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 39246137 - 39246057
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  39246137 gagaaaaagccaagagaagggagaaagacctagaaagccgcgattttgagttataaggtaagggtgggactaacattcaat 39246057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 20901273 - 20901353
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||||||||| ||  ||||  |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  20901273 gagaaaaagccaagagaagggagaacaacttagaaagctgcgattttcattgttaaggtaagggtgggactaacattcaat 20901353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 20909984 - 20909936
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  20909984 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 20909936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 29346950 - 29346902
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29346950 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29346902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 29349423 - 29349375
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29349423 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 29351896 - 29351848
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  29351896 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 29351848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 39364353 - 39364305
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  39364353 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 39364305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 13564 - 13420
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  13564 taaggtaagggtgagactagcattcaattctattaatttatataattctgatggttgtatttaacaagtgtaggattgattttagagaagttggagaatt 13465  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||| ||| |||||||||| || |||||||| |||||||||||    
T  13464 agggtttaagagagaaattgaagactaattgatgtagaatggtta 13420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 14762 - 14854
Alignment:
Q  11 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||||||||| | ||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  14762 agagagaaaaagctaagagaagggagaagcacctagagagctgcgatttttattgttaaggtaagggtgagactaactttgcaattctattaa 14854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 96; Significance: 7e-47; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 50746 - 50889
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  50746 taaggtaagggtgagactagcattcaattgtattaatctatataattctgatgattgtatttagcaagtgtaggattgaattacagaagttggagaatta 50845  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||| ||| |||||||||||||||||||||| ||||| |||||    
T  50846 gggtttaagagagaaattgaggattaattgatgtagaacggtta 50889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 171
Target Start/End: Original strand, 7505 - 7610
Alignment:
Q  66 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaat 164  Q
    |||||||| ||||||||||||||||||||||||||||| | | |||||    | |||||| |||||||| |||||||||| |||||| |||||||| |||    
T  7505 ataaggtatgggtgagactagcattcaattctattaat-tatgtaattcaattggttgtaattaacaagttgtaggattggattagaaaagttggaaaat 7603  T
Q  165 tagggtt 171  Q
    |||||||    
T  7604 tagggtt 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 538 - 627
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaat 103  Q
    |||||||| |||||||||||||| ||    ||||| ||||||||||  || | |||||||||||| ||||||||||||||||||||||||    
T  538 gagaaaaagccaagagaagggaggaaggcttagagagctgtgatttcaattcttaaggtaagggttagactagcattcaattctattaat 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 59886 - 60028
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||| | |||||||||||||| |||||    
T  59886 taaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aatta 59984  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
     |||||||||||||||||| |||||||||||| |||||| ||||    
T  59985 aggttaaagtgagaaattggggattaattgatgtagaattgtta 60028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 926 - 1062
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||||||||||| ||||||||||| | |||||||||||||| |||||    
T  926 taaggtaagggcgagactagcattcaattctattaagttgtataattatgatggttgtatttaacgagtgtaggattaatttagagaagttgga-aatta 1024  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    |||||||||||||||||||||||||||||||| |||||    
T  1025 gggttaaagtgagaaattgaggattaattgatgtagaa 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 20519267 - 20519463
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtg-ctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    ||||||||||||||||||| ||  || | |||||| | |||||||||  ||   ||||||||||||||||||||||||||||||||||||  ||||||||    
T  20519267 gagaaaaaaccaagagaagagaagaagacctagagaggctgtgatttcaatttctaaggtaagggtgagactagcattcaattctattaagttgtataat 20519366  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    | |||| || |||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  20519367 tctgatggtggtatctaacaagtgtaggattaatttagagaagttgga-aattagggttaaagtgagaaattgatgattaattgatgtagaattgtta 20519463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 69 - 210
Target Start/End: Original strand, 18786012 - 18786153
Alignment:
Q  69 aggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagg 168  Q
    ||||||||||||||||||||||||||||||||||| | | ||||| |||| ||||||||||  ||||||| |||||||||||||||||||||  ||||||    
T  18786012 aggtaagggtgagactagcattcaattctattaatctatgtaattctgatggttgtatttagtaagtgtatgattgaattagagaagttggaagattagg 18786111  T
Q  169 gttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||| ||| |||||||||||||||||||||| |||||||||||    
T  18786112 gtttaagagagaaattgaggattaattgatgtagaatggtta 18786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 43 - 210
Target Start/End: Complemental strand, 7680239 - 7680072
Alignment:
Q  43 ctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagga 141  Q
    ||||||||||| |||||| ||| | |||||||||| |||||||| ||||||||||||||||| | ||| ||| ||||| ||||||||| ||| |||||||    
T  7680239 ctagagtgctgcgatttttgattc-taaggtaaggatgagactaacattcaattctattaatctatatgattctgataattgtatttagcaaatgtagga 7680141  T
Q  142 ttgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||||||||||||||| |||||||||||| | || ||||||||||||||||||| |||||||||||    
T  7680140 ttgaattagagaagttggaaaattagggttaatgagaaaaattgaggattaattgatgtagaatggtta 7680072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 19672820 - 19672684
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  |||||||||||||| |||||||||||||||||||||||||||    
T  19672820 taaggtaagggtgagactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtatgattgaattagagaagttggagaatta 19672722  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    || ||||||||||||||||||||||||||||| |||||    
T  19672721 ggtttaaagtgagaaattgaggattaattgatgtagaa 19672684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 23705428 - 23705608
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||| |||||  | | |||| |||| |||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  23705428 gagaaaaagccaagagaagagagaagcaccaagagagctgcgatttttgattc-taaggtaagggtgagactagcattcaattctattaatctgtatgat 23705526  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    | |||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||| ||| ||||||||||| ||||||    
T  23705527 tctgatagttataattaacaattgtaggatggaattagagaagttggaaaattagggtttaagagagaaattgagaattaat 23705608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 22412315 - 22412449
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||| |||||||||||||||||||||||| | ||||| ||||||||| |||| || ||||||||||||||||||||| |||||||||||||||| |||||    
T  22412315 taagataagggtgagactagcattcaattatgttaatctgtataattctgatggt-gtatttaacaagtgtaggattaaattagagaagttgga-aatta 22412412  T
Q  167 gggttaaagtgagaaattgaggattaattgatataga 203  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  22412413 gggttaaagtgagaaattgatgattaattgatgtaga 22412449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 23208269 - 23208127
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||||||||| |  | | |||||||||| ||||||| |||||||||||||||| | ||||||||||| || |||||    
T  23208269 taaggtaagggtgagactagcattcaattctattcag-tctgtaattttgatggttgtatctaacaagtgtaggattaatttagagaagtt-gaaaatta 23208172  T
Q  167 gggttaaagtgag-aaattgaggattaattgatatagaatggtta 210  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||||    
T  23208171 gggttaaagtgagaaaattgatgattaattgatgtagaattgtta 23208127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 25176814 - 25176634
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| |  | | | |||||||| || |||||||||| |||||||||||||||||||| ||||||||||||||||  | ||| |||    
T  25176814 gagaaaaagccaagagaagagcaagagacctagagtgttgcgattttgatcaataaggtaagggtgagactaacattcaattctattaacctatatgatt 25176715  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
       ||| ||||||||| |||||| ||||||||||||||||||||||| || || |||||| | ||||||||||| ||||||    
T  25176714 catataattgtatttagcaagtgcaggattgaattagagaagttggaaaactacggttaatgagagaaattgagaattaat 25176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 23138080 - 23137900
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||| |  | | | ||||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||  |||||||     
T  23138080 gagaaaaagccaagagaagagcaagagacctagagtgctgcgatttttgattc-taaggtaagggtgagtctagcattcaattctattaagttgtataac 23137982  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    |   ||  ||||||||| ||||||||||||||||||||||||||| || ||||||| ||||   ||||||||||| ||||||    
T  23137981 tcatatgattgtatttagcaagtgtaggattgaattagagaagtttgaaaattaggattaatcagagaaattgagaattaat 23137900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 23549870 - 23549690
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||| |  | | | ||||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||  |||||||     
T  23549870 gagaaaaagccaagagaagagcaagagacctagagtgctgcgatttttgattc-taaggtaagggtgagtctagcattcaattctattaagttgtataac 23549772  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    |   ||  ||||||||| ||||||||||||||||||||||||||| || ||||||| ||||   ||||||||||| ||||||    
T  23549771 tcatatgattgtatttagcaagtgtaggattgaattagagaagtttgaaaattaggattaatcagagaaattgagaattaat 23549690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 23792246 - 23792117
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||| ||||||||||||  ||||||  | | ||||| ||||  ||  |||||||||||||| |||| | |||||||||||||| |||||    
T  23792246 taaggtaagggtgagcctagcattcaatcttattaag-tctgtaattctgatgattaaatttaacaagtgtatgattaatttagagaagttgga-aatta 23792149  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||| |||||||||||    
T  23792148 gggttaaagtgagaaattgatgattaattgat 23792117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 23005722 - 23005593
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||||||||  ||  |||||| |||||||||||| |  |||||||| || |||||||    
T  23005722 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattttgatgattaaatttaagaagtgtaggattagttttagagaa-tttgagaatt 23005625  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | |||||||| |||||||||| |||||||||||    
T  23005624 a-ggttaaagggagaaattgatgattaattgat 23005593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 25109840 - 25109711
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||| ||| |  |||||||| ||||||||||    
T  25109840 taaggtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtagaattagttttagagaa-ttggagaatt 25109743  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | ||| ||||||||||||||| |||||||||||    
T  25109742 a-ggtaaaagtgagaaattgatgattaattgat 25109711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 23660884 - 23660835
Alignment:
Q  124 tatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 173  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  23660884 tatttagcaagtgtaggattgaattagagaagtcggagaattagggttaa 23660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 21326779 - 21326905
Alignment:
Q  67 taaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaagt-gtaggattgaattagagaagttggagaat 164  Q
    ||||||||||||||||||| | ||||| ||||||||||  |||||||| || ||||  || ||| ||||| |||||||||||||||| |||||||| ||     
T  21326779 taaggtaagggtgagactaacgattcagttctattaattcgtataattctggtagtc-taattagcaagttgtaggattgaattagaaaagttgga-aac 21326876  T
Q  165 tagggttaaagtgagaaattgaggattaa 193  Q
    ||||||||| | |||||||||| ||||||    
T  21326877 tagggttaaggagagaaattgatgattaa 21326905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 22458690 - 22458818
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||| ||||||  | | ||||| |||| | |  ||||||||||||| ||||| |  || ||||||||||||||||    
T  22458690 taaggtaagggtgagactagcattcaattttattaa-gtctgtaattctgat-gattaatttaacaagtgtgggattaatctatagaagttggagaatta 22458787  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
      ||||||||||| ||||||  ||||||||||    
T  22458788 -tgttaaagtgaggaattgataattaattgat 22458818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 27754497 - 27754408
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||  | | |||| |||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  27754497 gagaaaaagccaagagaagggagaaccaccaagagggctgcgattttcatctataaggtaagggtgagactaactttgcaattctattaa 27754408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 21317870 - 21317996
Alignment:
Q  67 taaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaat 164  Q
    ||||||||||||||||||| | ||||| ||||||||||  ||||| || || ||| | || ||| |||| ||||||||||||||||| |||||||| ||     
T  21317870 taaggtaagggtgagactaacgattcagttctattaattcgtatagttctggtag-tctaattagcaagttgtaggattgaattagaaaagttgga-aac 21317967  T
Q  165 tagggttaaagtgagaaattgaggattaa 193  Q
    ||||||||| | |||||||||| ||||||    
T  21317968 tagggttaaggagagaaattgatgattaa 21317996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 22172926 - 22173006
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||| |||||  |||||||| |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  22172926 gagaaaaagccaagagaagagagaagcatctagagagctgcgattttcattgttaaggtaagggtgagactaacattcaat 22173006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 6972 - 7021
Alignment:
Q  161 gaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||||||||||  |||||| |||||||||||||||| |||||||||||    
T  6972 gaattagggttaagatgagaatttgaggattaattgatgtagaatggtta 7021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 24528825 - 24528894
Alignment:
Q  25 aagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||| |||||||||| |||||||| |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  24528825 aagaaaagggagaaacatctagagagctgcgattttcattgttaaggtaagggtgagactaacattcaat 24528894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 26506348 - 26506300
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  26506348 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 26506300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 26508826 - 26508778
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  26508826 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 26508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 27919957 - 27920005
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  27919957 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 27920005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 45027167 - 45027247
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||| ||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  45027167 gagaaaaagccaagagaaggaagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 45027247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 572368 - 572320
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  572368 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 572320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 18809912 - 18809864
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  18809912 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 18809864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 23131831 - 23131783
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  23131831 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 23131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 23134298 - 23134250
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  23134298 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 23134250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 23711206 - 23711254
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  23711206 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 23711254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 32038690 - 32038738
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  32038690 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 32038738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 39683285 - 39683237
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  39683285 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 39683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 9464 - 9333
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| | ||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  9464 taaggtaagggtgagactagcattcaattctattaacctatataactctgatgattgtatttagcaagtgtaggattgaattagagaagttggagaatta 9365  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||| ||| ||||||||||||||||||    
T  9364 gggttaaagagaggaattgaggattaattgat 9333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 228389 - 228262
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||| || |||||||||||| ||||||||||||||||||||| |||||    
T  228389 taaggtaagggtgagattagcattcaattctattaatctgtatgattctgatagttataattaacaagtgtatgattgaattagagaagttggaaaatta 228290  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| ||||||||||||||||||    
T  228289 gggttaaagggagaaattgaggattaat 228262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 37250265 - 37250447
Alignment:
Q  15 agaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattt 114  Q
    ||||||| |||||||||||||  || | |||||| |||| |||||  ||   ||||||||||||||||||| ||||||||||||||||   ||||||||     
T  37250265 agaaaaagccaagagaagggaagaagacctagagagctgcgatttcaatttctaaggtaagggtgagactaacattcaattctattaagtagtataattc 37250364  T
Q  115 tgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 198  Q
    |||| ||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37250365 tgatggttgtatttaacaagtgtatgattaatttagagaagttgga-aattagggttaaagtgagaaattgaggattaattgat 37250447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 23275616 - 23275480
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||||||||||||||||||||||||    
T  23275616 taaggtaagggtgagactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattgaattagagaagttggagaatta 23275518  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  23275517 gggttaaagtgataaattgaggattaattgatgtagaa 23275480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 2044856 - 2044983
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  2044856 taaggtaagggtgagactaacattcaattctattaacctatatgattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 2044955  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| ||||||||||||||||||    
T  2044956 gggttaaagagagaaattgaggattaat 2044983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 2047585 - 2047712
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  2047585 taaggtaagggtgagactaacattcaattctattaacctatatgattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaatta 2047684  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| ||||||||||||||||||    
T  2047685 gggttaaagagagaaattgaggattaat 2047712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 52522929 - 52523056
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| ||| |||||||| || |||||||||||| ||||||||||||||||||||| |||||    
T  52522929 taaggtaagggtgagactatcattcaattatattaatctgtatgattctgatagttataattaacaagtgtatgattgaattagagaagttggaaaatta 52523028  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||||| ||||||||||| ||||||    
T  52523029 gggttaaagagagaaattgagaattaat 52523056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 15471843 - 15471706
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||| ||||| ||||||||| |||||||||||||| ||||||||||||||| || ||    
T  15471843 taaggtaagggtgagactagcattcaattctattaatctatatgattctgataattgtatttagcaagtgtaggattggattagagaagttggaaaacta 15471744  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    ||||||| |  || |||||||||||||||||| |||||    
T  15471743 gggttaatgaaaggaattgaggattaattgatgtagaa 15471706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 1464580 - 1464776
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattt-tgatccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||| || |   ||||||||||||| ||||| |||| | |||||||||||||||||||||| |||||| |||||||  |||| ||    
T  1464580 gagaaaaagccaagagaagagaaagtgatctagagtgctgcgatttctgattc-taaggtaagggtgagactagcaatcaattttattaatcggtatgat 1464678  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    | |||| |||  |||||||||||||||||||||||||||| ||||||| || ||||||||| | |  ||||||||| ||||||||| |||||||||||    
T  1464679 tctgatggttaaatttaacaagtgtaggattgaattagaggagttggaaaactagggttaatgaggaaaattgagggttaattgatgtagaatggtta 1464776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 42387326 - 42387177
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 148  Q
    |||| |||||| ||| |||||||||||||||||||||| |||||||| | ||||| ||||| ||| | |||||| || ||||||||||||||||||||||    
T  42387326 gctgcgattttcatctataaggtaagggtgagactagccattcaattatgttaatctgtatgattctaatagttataattaacaagtgtaggattgaatt 42387227  T
Q  149 agagaagttggagaattagggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||| ||| ||||||||||||  ||| ||||||  ||||| |||||    
T  42387226 agagaagtcggaaaattagggttaatatgataaattggtgattacttgat 42387177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 18439506 - 18439347
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| |||||||||||||||| || |||||| |||| |||||| |||| ||||| |||||||||||||| | | ||||||||||||| | ||||||    
T  18439506 gagaaaaagccaagagaagggagaacaacctagag-gctgcgattttcatcctataagataagggtgagactaacttacaattctattaatctatataat 18439408  T
Q  113 tttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 173  Q
    | ||||  |  |||||| |||| ||||||||||||||||||||| ||| ||||||||||||    
T  18439407 tctgatgatcatatttagcaagggtaggattgaattagagaagtcggataattagggttaa 18439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 8500383 - 8500256
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga 145  Q
    |||||||| ||||||||   |||||||||||||||||||| | | ||||||||||||| | | ||||| ||||  ||||||||| |||||||||||||||    
T  8500383 gagtgctgcgattttgagttataaggtaagggtgagactaacttacaattctattaatctatgtaattctgatgattgtatttagcaagtgtaggattga 8500284  T
Q  146 attagagaagttggagaattagggttaa 173  Q
    |||||| | |||||||||||||||||||    
T  8500283 attagaaaggttggagaattagggttaa 8500256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 40212906 - 40213029
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||| | |||||||||||||| ||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  40212906 gctgcgattttgacctataaggtaagggtgggactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 40213005  T
Q  150 gagaagttggagaattagggttaa 173  Q
    ||||||||||||||||||||||||    
T  40213006 gagaagttggagaattagggttaa 40213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 210
Target Start/End: Original strand, 22109459 - 22109622
Alignment:
Q  45 agagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattg 144  Q
    |||| |||| |||||||||   ||||||||||||||||||| | | ||||| ||||||  | | ||||| |||||||||||||| ||||||||||||||     
T  22109459 agagagctgcgattttgatttctaaggtaagggtgagactaacttacaattatattaag-tctgtaattctgatagttgtatttgacaagtgtaggatta 22109557  T
Q  145 aattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    | ||  |||| ||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  22109558 atttgaagaaattg-agaattagggttaaagagaggaattgaggattaattgatatagaattgtta 22109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 24339940 - 24340044
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || ||| || |||||||||||||||||||||||| |||| ||||||    
T  24339940 taaggtaagggtgagactagcattcaattctattaatctatataattatgatgattttatctagcaagtgtaggattgaattagagaaattgg-gaatta 24340038  T
Q  167 gggtta 172  Q
    ||||||    
T  24340039 gggtta 24340044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 12386381 - 12386244
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 164  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| |||||||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  12386381 taaggtaagggtgggactagcattcaattctattaa-gtctatgattttgatggttgtatttaacacgttgtaggattagtttttgagaa-tttgagaat 12386284  T
Q  165 tagggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    || ||||||||||||||||||| ||||||||||||||||||    
T  12386283 ta-ggttaaagtgagaaattgatgattaattgatatagaat 12386244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 25475569 - 25475693
Alignment:
Q  50 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 148  Q
    |||| |||||| |||| |||||||||||||||||||| | | ||||||||||||| | | ||||| ||||  |  |||||| ||||||||||||||||||    
T  25475569 gctgcgattttcatcctataaggtaagggtgagactaacttacaattctattaatctatgtaattctgatgatcatatttagcaagtgtaggattgaatt 25475668  T
Q  149 agagaagttggagaattagggttaa 173  Q
    |||||||| ||||||||||||||||    
T  25475669 agagaagtcggagaattagggttaa 25475693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 27166095 - 27165988
Alignment:
Q  66 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 165  Q
    ||||| |||| ||||||||| | | ||||||||||||| | ||||||| ||||  ||||||||| ||||||||||||||||||||| | |||||||||||    
T  27166095 ataagataagagtgagactaacttacaattctattaatctatataattctgatgattgtatttagcaagtgtaggattgaattagaaaggttggagaatt 27165996  T
Q  166 agggttaa 173  Q
    ||||||||    
T  27165995 agggttaa 27165988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 22792214 - 22792103
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| ||| |||| |||||||||| |||| ||||| || || ||||||||||| || ||||    
T  22792214 taaggtaagggtgagactagcattcaattttattaatctatatgattctgatggttgtatttagcaagagtagggttggatttagagaagtttgaaaatt 22792115  T
Q  166 agggttaaagtga 178  Q
    | |||||||||||    
T  22792114 a-ggttaaagtga 22792103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 12171293 - 12171382
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||||||||||||||||||||| | ||||||||||| |||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  12171293 gagaaaaaaccaagagaagggagaaagacctagagtgctgcgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 12171382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 14502118 - 14501988
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    ||||||||||||||||||| ||||||||||||||||| | | |||||      ||||||  |||||||||||||||||  || |||||| ||| ||||||    
T  14502118 taaggtaagggtgagactaacattcaattctattaat-tctgtaattcaatcggttgtaaataacaagtgtaggattggttttagagaatttg-agaatt 14502021  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||  ||||||||||||    
T  14502020 agggttaaagtgagaaatttgggattaattgat 14501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 21838425 - 21838284
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt-agagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||| |||| |  | | ||||| ||||  ||  ||||||||||||||| ||| | || ||||| |||||||||||    
T  21838425 taaggtaagggtgagactagcattcaattatattgag-tctgtaattctgatgattaaatttaacaagtgtagaattaattttagaga-gttggagaatt 21838328  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||| |||||||||| |||||| ||||||||||| |||||| ||||    
T  21838327 agg-ttaaagtgaggaattgacgattaattgatgtagaattgtta 21838284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 28195578 - 28195452
Alignment:
Q  71 gtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaattaggg 169  Q
    ||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||||||    
T  28195578 gtaagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaattaggg 28195481  T
Q  170 ttaaagtgagaaattgaggattaattgat 198  Q
    |||| ||||||||||   |||||||||||    
T  28195480 ttaaggtgagaaatttgagattaattgat 28195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 10557779 - 10557649
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||| ||||||||||||||||||  | | ||||| ||||  ||  ||||||||| ||||||||| |  |||||||| || |||||||    
T  10557779 taaggtaagggtgagaccagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaactgtaggattggttttagagaa-tttgagaatt 10557682  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||| ||||||||||||   |||||||||||    
T  10557681 agggttcaagtgagaaatttgagattaattgat 10557649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 12851565 - 12851692
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| |||| |||||||||| || |    
T  12851565 taaggtaagggtgagactagcatacaattctattaat-tttttaattcaattggttgtaattaacaagttgtaggattggattatagaagttggaaaact 12851663  T
Q  166 agggttaaagtgaga-aattgaggattaa 193  Q
    |||||||| | |||| |||||| ||||||    
T  12851664 agggttaatgagagagaattgatgattaa 12851692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 45798190 - 45798097
Alignment:
Q  11 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcca--taaggtaagggtgagactagcattcaattctattaat 103  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||| |||   || |  |||||||||||||||||||||||||||||||||||||    
T  45798190 agagagaaaaagccaagagaagggaggaaagcctagagagctgtgctttct-tcaaactaaggtaagggtgagactagcattcaattctattaat 45798097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 53300772 - 53300930
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||  ||||||||| ||||||| | ||||   |||| |||||||||   ||||||||| ||||||||||||||||||||||||||  | | |||||    
T  53300772 gagaaaatgccaagagaatggagaaagacctaggaagctgcgattttgattgttaaggtaagagtgagactagcattcaattctattaa-gtctgtaatt 53300870  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 173  Q
     ||||  |||||||||  || |  | |||||||||||| | |||||| ||||||||||||    
T  53300871 ctgatgattgtatttagaaaataaaagattgaattagaaaggttggaaaattagggttaa 53300930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 13443174 - 13443085
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||  | | |||| |||| |||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  13443174 gagaaaaagccaagagaagggagaaccaccaagagggctgcgattttcatctataaggtaagggtgagactaactttgcaattctattaa 13443085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 53069848 - 53069937
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||  | |||||| ||||||||||| ||   ||||||||||||||||||| | || ||||||||||||    
T  53069848 gagaaaaatccaagagaagggagaagcacctagagagctgtgattttcattgttaaggtaagggtgagactaactttgcaattctattaa 53069937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 23412376 - 23412412
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaat 103  Q
    |||||||||||||||||||||||||||||||||||||    
T  23412376 taaggtaagggtgagactagcattcaattctattaat 23412412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 45219412 - 45219533
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  |||||||||| |||||||| | |||  |||||||||||||||    
T  45219412 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatta-atttaacaagagtaggattaatttaaggaagttggagaatta 45219509  T
Q  167 gggttaaagtgagaaattgaggatt 191  Q
     |||||||||||| |||||| ||||    
T  45219510 -ggttaaagtgaggaattgatgatt 45219533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 45577602 - 45577682
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  45577602 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 45577682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 50243916 - 50243836
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  50243916 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagactaacattcaat 50243836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 17738232 - 17738197
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaa 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  17738232 taaggtaagggtgagactagcattcaattctattaa 17738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 19039552 - 19039517
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaa 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  19039552 taaggtaagggtgagactagcattcaattctattaa 19039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 14235393 - 14235331
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtattta 129  Q
    |||||||||||||||||||| ||||||||||||||  || ||| ||| ||||| |||||||||    
T  14235393 taaggtaagggtgagactagtattcaattctattatcatatatgattctgataattgtattta 14235331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 605522 - 605598
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattg 144  Q
    |||||||||||||||||||||||| |||||||||||  | ||||| | ||||  ||  ||||||||||||||||||||    
T  605522 taaggtaagggtgagactagcatttaattctattaa-ctatataactatgatgattagatttaacaagtgtaggattg 605598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 21619505 - 21619425
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| || |||| |||||||| | ||||| ||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  21619505 gagaaaaagccgagaggagggagaaga-tctaggagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 21619425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 43928058 - 43927982
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt 143  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| |||| ||||||||||||||| |||||||||    
T  43928058 taaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatggttgtatttaacaagttgtaggatt 43927982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 15978536 - 15978456
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  15978536 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgggactaacattcaat 15978456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 45606119 - 45606167
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  45606119 gagtgctgtgattttcatctataaggtaagggtgggactaacattcaat 45606167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 55477461 - 55477413
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  55477461 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 55477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 45798050 - 45798011
Alignment:
Q  159 gagaattagggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  45798050 gagaattagggttaaagtgagaaatttgggattaattgat 45798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 29171797 - 29171871
Alignment:
Q  11 agagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    ||||||||||  |||||||||||||||| || |||||  |||| |||||| ||   |||||||||||||||||||    
T  29171797 agagagaaaacgccaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagacta 29171871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 320209 - 320137
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagg 140  Q
    ||||||||||||||||||| ||||||||||| ||||  || ||||||||||| |||  || ||||| |||||||    
T  320209 taaggtaagggtgagactaacattcaattctcttaagctg-ataattttgatggttagatataacatgtgtagg 320137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 23317937 - 23318009
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagg 140  Q
    ||||||||||||||||||| ||||||||||| ||||  || |||| |||||| |||  |||||||| |||||||    
T  23317937 taaggtaagggtgagactaacattcaattctcttaagctg-ataaatttgatggttagatttaacatgtgtagg 23318009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 49388792 - 49388881
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  ||   ||||||||||||||||||| | || ||||||||||||    
T  49388792 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaatttctaaggtaagggtgagactaactttgcaattctattaa 49388881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 7780538 - 7780586
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  7780538 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 7780586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 10246915 - 10246963
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  10246915 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 10246963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 13150981 - 13151029
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  13150981 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 13151029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 13153449 - 13153497
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  13153449 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 13153497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 17464147 - 17464099
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  17464147 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 17464099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 34160295 - 34160247
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  34160295 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 34160247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 46242 - 46378
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||  |||||||||||||| |||||||||||||||||||||||||||    
T  46242 taaggtaagggtgagactagcattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaagattgaattagagaagttggagaatta 46340  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46341 gggttaaagtgagaaattgaggattaattgatgtagaa 46378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 102771 - 102931
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-att 148  Q
    |||| |||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||  |||  ||    
T  102771 gctgcgattttgatttataaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagtgtagggatgatttt 102870  T
Q  149 agagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||| | |||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  102871 agagaa-tgggagaattagggttaaggtgagaaattgatgattaattgatgtagaatggtta 102931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 905 - 1049
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||| |||| |||||||||||||||||||||||| |  |||||||||||||||||||    
T  905 taaggtaagggtgagactagcattcaattttattaatctatataattctgatggttgtatttaacaagtgtaggattaattttagagaagttggagaatt 1004  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||| | ||| |||||||| ||||||||||||| |||||||||||    
T  1005 agggattaagagagaaattaaggattaattgatgtagaatggtta 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 17107 - 17244
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||| ||||||||||  |||||||| ||||||||||    
T  17107 taaggtaagggtgagactagcattcaattctattaatctatataattctgatggttgtatttaacaagggtaggattgattttagagaa-ttggagaatt 17205  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  17206 agggtt-aagtgagaaattgaggattaattgatgtagaat 17244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 208
Target Start/End: Original strand, 23654 - 23848
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| |  | | | ||||||||||| |||||||||   ||||||||||||||||||| | | ||||||||||||| | ||| |||    
T  23654 gagaaaaagccaagagaagagcaagagacctagagtgctgcgattttgattattaaggtaagggtgagactaacttacaattctattaatctatatgatt 23753  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgatatagaatggt 208  Q
     ||||| ||||||||| |||||||||||||||||| ||||||||||| || ||||||||| | ||||||||||| |||||||||| |||||||||    
T  23754 ctgataattgtatttagcaagtgtaggattgaatttgagaagttggaaaactagggttaatgagagaaattgagaattaattgatgtagaatggt 23848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 33413 - 33276
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||| |||||    
T  33413 taaggtaagggtgagactagcattcaattctattaacctatataattctgatgattgtatttagcaagtgtaggattgaattggagaagttggaaaatta 33314  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    ||||||| |  ||||||||||||||||||||| |||||    
T  33313 gggttaatgaaagaaattgaggattaattgatgtagaa 33276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 8750 - 8567
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| ||||||||||||||||| | ||||| | ||| |||||||||| ||||||| |||||||||||||||||||||||||||||  | ||| |||    
T  8750 gagaaaaagccaagagaagggagaaagacctagatttctgcgattttgatctataaggt-agggtgagactagcattcaattctattaacctatatgatt 8652  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 198  Q
       ||  |||||||||||||||||  ||||||||||||||||||||| || ||||||||| | ||| ||||||||||||||||||    
T  8651 catatgattgtatttaacaagtgtgagattgaattagagaagttggaaaactagggttaatgagaggaattgaggattaattgat 8567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 135515 - 135644
Alignment:
Q  56 attttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaag 155  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||||||||| ||||||||||||| | |||||||||    
T  135515 attttgatttataaggtaagagtgagactagcattcaattctattaagttgtataattctgatggttgtatttagcaagtgtaggattaatttagagaag 135614  T
Q  156 ttggagaattagggttaaagtgagaaattga 186  Q
    ||||| |||||||||||||||||||||||||    
T  135615 ttgga-aattagggttaaagtgagaaattga 135644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 144223 - 144352
Alignment:
Q  56 attttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaag 155  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||||||||| ||||||||||||| | |||||||||    
T  144223 attttgatttataaggtaagagtgagactagcattcaattctattaagttgtataattctgatggttgtatttagcaagtgtaggattaatttagagaag 144322  T
Q  156 ttggagaattagggttaaagtgagaaattga 186  Q
    ||||| |||||||||||||||||||||||||    
T  144323 ttgga-aattagggttaaagtgagaaattga 144352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 12913 - 12777
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | ||||||||||||  | | ||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  12913 taaggtaagggtgagactaacttacaattctattaag-tctgtaattctgatggttgtatttaacaagtgtaggattgaattagagaaattggaaaatta 12815  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaa 204  Q
    || |||||| |||||||||||||||||||||| |||||    
T  12814 ggcttaaagagagaaattgaggattaattgatgtagaa 12777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 67 - 210
Target Start/End: Original strand, 9769 - 9912
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | ||||||||||||| | ||| ||| ||||  ||||||||| |||||||||||||||||||||||||||||| || ||    
T  9769 taaggtaagggtgagactaacttacaattctattaatctatatgattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaacta 9868  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | ||||||| ||| |||||||||| |||||||||||    
T  9869 gggttaatgagagaaatagagaattaattgatgtagaatggtta 9912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 26412 - 26533
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||  | | ||||| ||||  ||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  26412 taaggtaagggtgagactagcattcaattctattaacctatgtaattctgatgattgtatttagcaagtataggattgaattagagaagtttgagaatta 26511  T
Q  167 gggttaaagtgagaaattgagg 188  Q
    ||||||||| || |||||||||    
T  26512 gggttaaagagataaattgagg 26533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 177 - 357
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||  |||||||||| || | | | ||||||||||| |||||  ||   ||||||||||||||||||||||||||||||||||||  ||||||| |    
T  177 gagaaaatgccaagagaagagaaagagacctagagtgctgcgatttgtattgctaaggtaagggtgagactagcattcaattctattaagttgtataact 276  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
       ||  ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||| ||||||    
T  277 catatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattaggattaatgagagaaattgagaattaat 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 1491 - 1350
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  ||||||  | ||||||| ||||  ||| |||||||||||||||||||   |||||||||||||| |||||    
T  1491 taaggtaagggtgagactagcattcaatcttattaag-tctataattctgatgattgaatttaacaagtgtaggattagtttagagaagttgga-aatta 1394  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||    
T  1393 gggttaaagtgagaaattgatgattaattgatgtagaattgtta 1350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 8616 - 8767
Alignment:
Q  43 ctagagtgctgtgatttt-gatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagga 141  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||  ||||||| |   ||  ||||||||| |||||||| ||    
T  8616 ctagagtgctgcgatttttgattc-taaggtaagggtgagactagcattcaattctattaagttgtataactcatatgattgtatttagcaagtgtaaga 8714  T
Q  142 ttgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    |||||||| |||||||||| |||||||||||| | ||||||||||| ||||||    
T  8715 ttgaattaaagaagttggaaaattagggttaatgagagaaattgagaattaat 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 5271 - 5451
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| || | | | |||||| |||| |||||| ||   ||||||||||||||||||||||||||||||||||||  | ||||| |    
T  5271 gagaaaaagccaagagaagagaaagagacctagagagctgcgattttcattgctaaggtaagggtgagactagcattcaattctattaagttatataact 5370  T
Q  114 ttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
       ||  ||||||||| ||||||||||||||||||| ||||||| || |||||||||||| | ||||||||||| ||||||    
T  5371 catatgattgtatttagcaagtgtaggattgaattacagaagttagaaaattagggttaatgagagaaattgagaattaat 5451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 11325 - 11182
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||||||||||   | |||||||   ||  ||||| ||| |||||||| ||||||||||||||||||||| || ||    
T  11325 taaggtaagggtgagactagcattcaattctattatcctatataattcatatgattgtaattagcaagtgtatgattgaattagagaagttggaaaacta 11226  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||| | ||| |||||| ||||||||||| |||||||||||    
T  11225 gggttaatgagaggaattgatgattaattgatgtagaatggtta 11182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 193
Target Start/End: Complemental strand, 11464 - 11321
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||| |  ||||||||||||||||||| ||||||||||||||| | | ||||| |   ||  ||||||||| |||||||||||||||||||    
T  11464 gctgcgattttgaactctaaggtaagggtgagactatcattcaattctattattctatataactcatatgattgtatttagcaagtgtaggattgaatta 11365  T
Q  150 gagaagttggagaattagggttaaagtgagaaattgaggattaa 193  Q
    ||||||||||| |||||||||||| | ||||||||||| |||||    
T  11364 gagaagttggaaaattagggttaatgagagaaattgagaattaa 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 17245 - 17349
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| ||||  || |||||| |||||||||||||||||||||||||| || ||||||    
T  17245 taaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttagcaagtgtaggattgaattagagaagtagg-gaatta 17343  T
Q  167 gggtta 172  Q
    ||||||    
T  17344 gggtta 17349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 1181 - 1108
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagc 87  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   ||||||||||||||||||||||    
T  1181 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactagc 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 81242 - 81109
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||||||||||    | ||||| |||| |||||||| | ||||||||||||| | |||||||||||||| |||||    
T  81242 taaggtaagggtgagactagcattcaattctattaaggc-tgtaattctgatggttgtattga-caagtgtaggattaatttagagaagttgga-aatta 81146  T
Q  167 gggttaaagtgagaaattgaggattaattgatataga 203  Q
    ||||| |||||||||||||| ||||||||||| ||||    
T  81145 gggtttaagtgagaaattgatgattaattgatgtaga 81109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 117553 - 117473
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  117553 gagaaaaagccaagagaagggagaaagacctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 117473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 210
Target Start/End: Complemental strand, 268622 - 268480
Alignment:
Q  66 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||  |||||||| ||||||    | ||||| ||||  ||  ||||||||||||||||||| | |||||||||||||||| ||    
T  268622 ataaggtaagggtgagactattattcaattatattaagcc-tgtaattctgatgattagatttaacaagtgtaggattaatttagagaagttggaga-tt 268525  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaatggtta 210  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  268524 agggttaaagtgagaaattgaggattaattgatgtagaattgtta 268480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 13833 - 13706
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||||||||||  | ||| |||   ||  ||||||||| |||||||||||||||||||||||||||||| || ||    
T  13833 taaggtaagggtgagactaacattcaattctattaacctatatgattcatatgattgtatttagcaagtgtaggattgaattagagaagttggaaaacta 13734  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||| | ||||||||||| ||||||    
T  13733 gggttaatgagagaaattgagaattaat 13706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 17365 - 17495
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||| ||||||||  ||||||  | | ||||| |||| |||||||||||||||||||||||| |  |||| ||||||||| || |    
T  17365 taaggtaagggtgagactaacattcaatcttattaag-tctgtaattctgatggttgtatttaacaagtgtaggattagttttagtgaagttgga-aact 17462  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||||||| |||||| ||||    
T  17463 agggttaaagtgagaaattgatgattaactgat 17495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 64; Significance: 9e-28; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 25249 - 25372
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  25249 gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatataattatgatgatcatatttagcaagtgtaggattgaatta 25348  T
Q  150 gagaagttggagaattagggttaa 173  Q
    ||||||  ||||||||||||||||    
T  25349 gagaagacggagaattagggttaa 25372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 32679 - 32802
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatta 149  Q
    |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||||    
T  32679 gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaatta 32778  T
Q  150 gagaagttggagaattagggttaa 173  Q
    ||||| | | ||||||||||||||    
T  32779 gagaaatcgaagaattagggttaa 32802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 33816 - 33864
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  33816 gagtgctgcgattttcatctataaggtaagggtgagactaacattcaat 33864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 5461 - 5597
Alignment:
Q  68 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatta 166  Q
    |||||||||||||||||| ||||||||  ||||||  | | ||||| |||| |||||||||||||||||||||||| |  |||||||||||||| || ||    
T  5461 aaggtaagggtgagactaacattcaatcttattaag-tctgtaattctgatggttgtatttaacaagtgtaggattagttttagagaagttgga-aacta 5558  T
Q  167 gggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  5559 gggttaaagtgagaaattgatgattaattgatgtagaat 5597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 11117 - 10957
Alignment:
Q  14 gagaaaaaaccaagagaaggg--agaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataa 111  Q
    ||||||||||||||||||| |  ||| | | |||||| |||| |||||||||| |||||||||||||||||||| | | ||||||||||||| | ||||     
T  11117 gagaaaaaaccaagagaagagcaagagagacctagag-gctgcgattttgatctataaggtaagggtgagactaacttacaattctattaatctatatac 11019  T
Q  112 ttttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaa 173  Q
    || |||   |  |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11018 ttctgacgatcatatttagcaagtgtaggattgaattagagaagtcggagaattagggttaa 10957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 25475 - 25609
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | ||||||||||||  | | ||||| ||||  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  25475 taaggtaagggtgagactaacttacaattctattaag-tctgtaattctgatgattgtatttagcaagtgtaggattgaattagagaagttgga-aatta 25572  T
Q  167 gggttaaagtgagaaattgaggattaattgatataga 203  Q
    ||||| ||||||| |||| | ||||||||||| ||||    
T  25573 gggtttaagtgaggaattaatgattaattgatgtaga 25609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 39289 - 39159
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| | || |||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  39289 taaggtaagggtgagactagcattcaatcttattaag-tctgtaattctaatggttgtatttaacaagtgtaggatttgttttagaaaagttg-agaatt 39192  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    ||||||||||||||||||||| |||||||||||    
T  39191 agggttaaagtgagaaattgatgattaattgat 39159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 7532 - 7405
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| |||||||||||||||   | |||||||   ||  ||||||  | |||||||||||||||||||||||||||||| || ||    
T  7532 taaggtaagggtgagactaacattcaattctattatcctatataattcatatgattgtatccagcaagtgtaggattgaattagagaagttggaaaacta 7433  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||| | ||||||||||||||||||    
T  7432 gggttaatgagagaaattgaggattaat 7405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 14912 - 14785
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| |||||||||||||||   | |||||||   ||  ||||||  | |||||||||||||||||||||||||||||| || ||    
T  14912 taaggtaagggtgagactaacattcaattctattatcctatataattcatatgattgtatccagcaagtgtaggattgaattagagaagttggaaaacta 14813  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||| | ||||||||||||||||||    
T  14812 gggttaatgagagaaattgaggattaat 14785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Original strand, 197 - 321
Alignment:
Q  50 gctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaatt 148  Q
    |||| |||||| |||| |||||||||||||||||||| | | ||||||||||||| | ||||||  ||||  |  |||||| ||||||||||||||||||    
T  197 gctgcgattttcatcctataaggtaagggtgagactaacttacaattctattaatctatataatcctgatgatcatatttagcaagtgtaggattgaatt 296  T
Q  149 agagaagttggagaattagggttaa 173  Q
    |||||||| ||||||||||||||||    
T  297 agagaagtcggagaattagggttaa 321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 86510 - 86382
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||| |||||||  | | ||||| ||||  ||  ||||||||||||||||||| | ||||||||||||||||||||    
T  86510 taaggtaagggtgagactagcattcaatcctattaag-tctgtaattctgatgatta-atttaacaagtgtaggattaatttagagaagttggagaatta 86413  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
     ||||||| |||| |||||| |||||||||||    
T  86412 -ggttaaattgaggaattgatgattaattgat 86382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 29456 - 29330
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataattttga 117  Q
    |||| ||||||||||||||||| | |||||| |||| |||||   || ||||||||| | |||||||| ||||||||||||||||| | ||||||| |||    
T  29456 aaaatccaagagaagggagaaacacctagagagctgcgatttcattctataaggtaatgatgagactaacattcaattctattaatctatataattctga 29357  T
Q  118 tagttgtatttaacaagtgtaggattg 144  Q
    |  || |||||||||||||||||||||    
T  29356 tgattttatttaacaagtgtaggattg 29330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 46899 - 46718
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| ||||||||||| ||||  | ||||||||||| |||||| | || |||||||||||||||||||| | | ||||| ||||||  | ||| ||    
T  46899 gagaaaaagccaagagaaggaagaaggacctagagtgctgcgattttcaatctataaggtaagggtgagactaacttacaattttattaacctatatgat 46800  T
Q  113 tttgatagttgtatttaacaagt-gtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 193  Q
    |   ||  || || ||| ||||| ||||||||||||||||||||||||| || ||||||||| | ||||| |||| ||||||    
T  46799 tcatatgattataattagcaagtcgtaggattgaattagagaagttggaaaactagggttaatgagagaatttgatgattaa 46718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 32107 - 32288
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaatatgtataat 112  Q
    |||||||| ||||||||||| ||||  | ||||||| ||| |||||| | || |||||||||||||||||||| | | ||||| ||||||  | ||| ||    
T  32107 gagaaaaagccaagagaaggaagaaggacctagagtactgcgattttcaatctataaggtaagggtgagactaacttacaattttattaacctatatgat 32206  T
Q  113 tttgatagttgtatttaacaagt-gtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 193  Q
    |   ||  || || ||| ||||| ||||||||||||||||||||||||| || ||||||||| | ||||| |||| ||||||    
T  32207 tcatatgattataattagcaagtcgtaggattgaattagagaagttggaaaactagggttaatgagagaatttgatgattaa 32288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 10311 - 10258
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  10311 gctgcgattttgatctataaggtaagggtgagactaactttacaattctattaa 10258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 17022 - 16969
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcattc-aattctattaa 102  Q
    |||| |||||||||| |||||||||||||||||||| | ||| |||||||||||    
T  17022 gctgcgattttgatctataaggtaagggtgagactaactttctaattctattaa 16969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 38173 - 38275
Alignment:
Q  71 gtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggt 170  Q
    ||||||||||||||| | | ||||||||||||| |  |||||| ||||  ||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  38173 gtaagggtgagactaacttacaattctattaatctaaataattctgatgattgtatttagcaagtgtaggattgaattagaaaggttggagaattagggt 38272  T
Q  171 taa 173  Q
    |||    
T  38273 taa 38275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 40840 - 40655
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtg-ctgtgattttgatcc-ataaggtaagggtgagactagcattcaattctattaatatgtataa 111  Q
    |||||||| |||||||||||||||| |  |||||| | ||| |||||| |||| |||||||||||||||||||| | | |||||||||||||   ||||     
T  40840 gagaaaaagccaagagaagggagaagac-ctagaggggctgagattttcatcctataaggtaagggtgagactaacttacaattctattaatccatatag 40742  T
Q  112 ttttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||  |  |||||| |||||||||||||||||||||||||| | |||||||||||||| |  |||| |||| |||||| ||||    
T  40741 ttctgatgatcatatttagcaagtgtaggattgaattagagaagtcgaagaattagggttaatgatagaatttgatgattaaatgat 40655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 339152 - 339258
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | ||||||||||||| | ||||||| ||||  |  |||||| |||||||||||||||||| ||||||| |||||||||    
T  339152 taaggtaagggtgagactaacttacaattctattaatctatataattctgatgatcatatttagcaagtgtaggattgaattggagaagtcggagaatta 339251  T
Q  167 gggttaa 173  Q
    |||||||    
T  339252 gggttaa 339258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 15086 - 15159
Alignment:
Q  121 ttgtatttaacaagtgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    ||||||| |||||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  15086 ttgtattcaacaagtgtaggattgaattagagaagttggaaaactagggttaatgagagaaattgaggattaat 15159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 15050 - 15079
Alignment:
Q  67 taaggtaagggtgagactagcattcaattc 96  Q
    ||||||||||||||||||||||||||||||    
T  15050 taaggtaagggtgagactagcattcaattc 15079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 54 - 181
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    |||||||||||||||||||||||||||||||| || | | ||||| |   ||  ||||||||| | |||||||||||||||||||| ||||| | |||||    
T  54 taaggtaagggtgagactagcattcaattctactattctatataactcatatgattgtatttagcgagtgtaggattgaattagagcagttgaaaaatta 153  T
Q  167 gggttaaagtgagaaattgaggattaat 194  Q
    ||||||| | |||||||| | |||||||    
T  154 gggttaatgagagaaattaaagattaat 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 173
Target Start/End: Original strand, 16414 - 16521
Alignment:
Q  66 ataaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatt 165  Q
    |||||||||||||||||||| | | ||||||||||||| | ||||||  ||||  |  |||||| |||||||||||||||||||||| ||| ||||||||    
T  16414 ataaggtaagggtgagactaacttacaattctattaatctatataatcctgatgatcatatttagcaagtgtaggattgaattagaggagtcggagaatt 16513  T
Q  166 agggttaa 173  Q
    ||||||||    
T  16514 agggttaa 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 78540 - 78629
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||| |  ||||| |||| |||||| ||   ||| ||||||||||||||| | || ||||||||||||    
T  78540 gagaaaaagccaagagaagggagaaacacatagagagctgcgattttcattgttaaagtaagggtgagactaactttgcaattctattaa 78629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 823 - 717
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| | | |||||||||||||   |||| || ||||  |  |||||| |||||||||||||||||||||||||| |||||||||    
T  823 taaggtaagggtgagactaacttacaattctattaatccatatagttctgatgatcatatttagcaagtgtaggattgaattagagaagtcggagaatta 724  T
Q  167 gggttaa 173  Q
    |||||||    
T  723 gggttaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 29680 - 29550
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||      |||||| ||||||||||||||||| |  |||||||| || |||||||    
T  29680 taaggtaagggtgagactagcattcaattctattaat-tctgtaattcaatcggttgtaattaacaagtgtaggattggttttagagaa-tttgagaatt 29583  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||||||||||||||   |||||||||||    
T  29582 agggttaaagtgagaaatttgagattaattgat 29550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 22499 - 22628
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||| |||| |||||||  | | ||||| |||| ||| ||||||||||||||||| || |  |||||||| || |||||||    
T  22499 taaggtaagggtgagactagcatgcaatcctattaa-gtctgtaattctgatggttttatttaacaagtgtagggttagttttagagaa-tttgagaatt 22596  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    | ||||||||||||||||||| |||||||||||    
T  22597 a-ggttaaagtgagaaattgatgattaattgat 22628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 62331 - 62459
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||||||||||||  || |||  | | ||||| ||||  ||  ||||||||| ||||||||| | ||||||||||||||||||||    
T  62331 taaggtaagggtgagactagcattcaatcttaataag-tctgtaattctgatgatta-atttaacaaatgtaggattaatttagagaagttggagaatta 62428  T
Q  167 gggttaaagtgagaaattgaggattaattgat 198  Q
     |||||||||||| |||||| |||||||||||    
T  62429 -ggttaaagtgaggaattgatgattaattgat 62459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 7627 - 7512
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaatta 166  Q
    ||||||||||||||||||| ||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||||  |||||||| || ||||||||    
T  7627 taaggtaagggtgagactaacattcaattctattaag-tctgtaattctgatgattaaatttaacaagtgtaggattggtttagagaa-tttgagaatta 7530  T
Q  167 gggttaaagtgagaaatt 184  Q
    |||||| ||||| |||||    
T  7529 gggttatagtgaaaaatt 7512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 17468 - 17598
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||      |||||| ||||||||||||||||| |  |||||||| || |||||||    
T  17468 taaggtaagggtgagactagcattcaattctattaat-tctgtaattcaatcggttgtaattaacaagtgtaggattggttttagagaa-tttgagaatt 17565  T
Q  166 agggttaaagtgag-aaattgaggattaattgat 198  Q
    |||||||||||||| ||||||| |||||||||||    
T  17566 agggttaaagtgagaaaattga-gattaattgat 17598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 10829 - 10725
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 165  Q
    |||||||||||||||||||||||||||||||||| || | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| ||||    
T  10829 taaggtaagggtgagactagcattcaattctattgat-tctgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaatt 10731  T
Q  166 agggtt 171  Q
    ||||||    
T  10730 agggtt 10725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 247 - 377
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    |||| |||||||||||||||||||||||||||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  |||||||| || |||||||    
T  247 taagataagggtgagactagcattcaattctattaa-gtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaa-tttgagaatt 344  T
Q  166 agggttaaagtgagaaattgaggattaattgat 198  Q
    |||||||| ||||||||||   |||||||||||    
T  345 agggttaaggtgagaaatttgagattaattgat 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 1636 - 1763
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| || |    
T  1636 taaggtaagggtgagactagcatacaattctattaat-tctgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaact 1734  T
Q  166 agggttaaagtgaga-aattgaggattaa 193  Q
    |||||||| | |||| |||||| ||||||    
T  1735 agggttaatgagagagaattgatgattaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 17744 - 17673
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| ||||||||||||||||  | |||||| |||| |||||| ||   |||||||||||||||||||    
T  17744 gagaaaaagccaagagaagggagaagcacctagagagctgcgattttcattgttaaggtaagggtgagacta 17673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 23851 - 23978
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||    | |||||| |||||||| |||||||||| ||||||||||||||| || |    
T  23851 taaggtaagggtgagactagcatacaattctattaat-tatgtaattcaattggttgtaattaacaagttgtaggattggattagagaagttggaaaact 23949  T
Q  166 agggttaaagtgaga-aattgaggattaa 193  Q
    |||||||| | |||| |||||| ||||||    
T  23950 agggttaatgagagagaattgatgattaa 23978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 31235 - 31147
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 102  Q
    |||||||| |||| |||||||||||| | ||||   |||| |||||||||   ||||||||||||||||||||||||||||||||||||    
T  31235 gagaaaaagccaatagaagggagaaagacctaggaagctgcgattttgattgttaaggtaagggtgagactagcattcaattctattaa 31147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 1555 - 1376
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaatatgtataatt 113  Q
    |||||||| |||||||||| || | | | | |||| |||| ||||||||| | |||||||||||||||| |||||||||||||||||||| | | |||||    
T  1555 gagaaaaagccaagagaagagaaagagaccaagagagctgcgattttgattc-taaggtaagggtgagattagcattcaattctattaat-tttgtaatt 1458  T
Q  114 ttgatagttgtatttaacaagtgtaggattga-attagagaagttggagaattagggttaaagtga-gaaattgaggattaat 194  Q
        | |||||| |||||||||||||||| ||  |||||||| ||  |||||||||||||||| || |||||||| |||||||    
T  1457 caattggttgtaattaacaagtgtaggatggattttagagaa-tttcagaattagggttaaagagaggaaattgatgattaat 1376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 6942 - 6866
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||||||||||||||||| |||||||  || | ||||||||   |||||||||||||||||||| ||||||||    
T  6942 aaaaaccaagagaagggagaaagatctagaaagcggcgattttgagttataaggtaagggtgagactaacattcaat 6866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 2983 - 2847
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggatt-gaattagagaagttggagaatt 165  Q
    ||||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||  ||||||||||||||||||| |  ||||| || ||| ||| ||    
T  2983 taaggtaagggtgagactagcattcaatcttattaag-tctttaattctgatgattaaatttaacaagtgtaggattagttttagataatttg-agagtt 2886  T
Q  166 agggttaaagtgagaaattgaggattaattgatatagaat 205  Q
    ||| ||||||||||||||||| ||||||||||| ||||||    
T  2885 agg-ttaaagtgagaaattgatgattaattgatgtagaat 2847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 98 - 9
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttga-tccataaggtaagggtgagactagcattcaattctattaa 102  Q
    |||||||| ||||||||||||||||  | ||||||| ||| |||||| | || |||||||||||||||||||| | | ||||||||||||    
T  98 gagaaaaagccaagagaagggagaaggacctagagtactgcgattttcaatctataaggtaagggtgagactaacttacaattctattaa 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 2232 - 2102
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggatt-gaattagagaagttggagaat 164  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||| | || ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  2232 taaggtaagggtgggactagcattcaattctattaa-gtctatgattctaatggttgtatttaacaggttgtaggattagtttttgagaa-tttgagaat 2135  T
Q  165 tagggttaaagtgagaaattgaggattaattgat 198  Q
    || |||||||||||||||||||  ||||||||||    
T  2134 ta-ggttaaagtgagaaattgataattaattgat 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 5676 - 5605
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    ||||||||||||||||||||||||| |  |||| ||||||| |||||| ||| ||||||||||||||||||||    
T  5676 gagaaaaaaccaagagaagggagaagac-ctaggagtgctgcgattttcatctataaggtaagggtgagacta 5605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 15136 - 15065
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| |||||||||||||||| |    ||||||||| |||||| ||| ||||||||||||||||||||    
T  15136 gagaaaaagccaagagaagggagaagacctaagagtgctgcgattttcatctataaggtaagggtgagacta 15065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 14610 - 14520
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatcca--taaggtaagggtgagactagcattcaattctattaat 103  Q
    |||||||| |||||||||||||| |||  |||||| ||||||||||   || |  |||||||||| ||||||||||||||||||||||||||    
T  14610 gagaaaaagccaagagaagggaggaaagcctagagagctgtgatttct-tcaaactaaggtaaggatgagactagcattcaattctattaat 14520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 23069 - 23151
Alignment:
Q  12 gagagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    ||||||||||  |||||||||||||||| | |||||| |||| |||||| ||   ||||||||||||| ||||| ||||||||    
T  23069 gagagaaaaagtcaagagaagggagaaacacctagagagctgcgattttcattgttaaggtaagggtgtgactaacattcaat 23151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 31370 - 31434
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaaca 132  Q
    ||||||||||||| ||||||||||||||||||||||  | ||| ||| |||| |||||||||||||    
T  31370 taaggtaagggtgggactagcattcaattctattaa-gtctatgattctgatggttgtatttaaca 31434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 366 - 277
Alignment:
Q  15 agaaaaaaccaagagaagggagaaaaatctaga-gtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||||| ||||||||||||||||  | | ||| | |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  366 agaaaaagccaagagaagggagaaccaccaagaagggctgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 137651 - 137603
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  137651 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 137603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 142589 - 142541
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  142589 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 142541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 145058 - 145010
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  145058 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 145010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 97999 - 97869
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattga-attagagaagttggagaat 164  Q
    |||||||||||||  |||| ||||||||||||||||  | ||| ||| |||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  97999 taaggtaagggtggaactaacattcaattctattaa-gtctatgattctgatggttgtatttaacaggttgtaggattaatttttgagaa-tttgagaat 97902  T
Q  165 tagggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||||||||| ||||||| |||||||||||    
T  97901 ta-ggttaaagtgataaattgatgattaattgat 97869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 198
Target Start/End: Complemental strand, 107277 - 107147
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattga-attagagaagttggagaat 164  Q
    |||||||||||||  |||| ||||||||||||||||  | ||| ||| |||| ||||||||||||| | ||||||||| |  || ||||| || ||||||    
T  107277 taaggtaagggtggaactaacattcaattctattaa-gtctatgattctgatggttgtatttaacaggttgtaggattaatttttgagaa-tttgagaat 107180  T
Q  165 tagggttaaagtgagaaattgaggattaattgat 198  Q
    || ||||||||||| ||||||| |||||||||||    
T  107179 ta-ggttaaagtgataaattgatgattaattgat 107147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 7679 - 7599
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||||||||||| | || |||||  |||| |||||| ||   ||||||||||||||||||| ||||||||    
T  7679 gagaaaaagccaagagaagggaggacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacattcaat 7599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 5452 - 5381
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagacta 85  Q
    |||||||| |||||||||||||| || | ||||||||||| |||||| |||  ||||||||||||||||||||    
T  5452 gagaaaaatccaagagaagggag-aagacctagagtgctgcgattttcatcttataaggtaagggtgagacta 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 13034 - 12963
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagacta 85  Q
    |||||||| |||||||||||||| || | ||||||||||| |||||| |||  ||||||||||||||||||||    
T  13034 gagaaaaatccaagagaagggag-aagacctagagtgctgcgattttcatcttataaggtaagggtgagacta 12963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 22986 - 22915
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagacta 85  Q
    |||||||| |||||||||||||| || | ||||||||||| |||||| |||  ||||||||||||||||||||    
T  22986 gagaaaaatccaagagaagggag-aagacctagagtgctgcgattttcatcttataaggtaagggtgagacta 22915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 8274 - 8194
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||||||||||||||||||||| | |||||  || |  |||||||   |||||||||||||| ||||| ||||||||    
T  8274 gagaaaaaaccaagagaagggagaaagacctagaaagcggctattttgagttataaggtaagggtgggactaacattcaat 8194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 7681 - 7769
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaattctattaa 102  Q
    |||||||| | |||||||||||||| || |||||  |||| |||||| ||   ||||||||||||||||||| | | ||||||||||||    
T  7681 gagaaaaagcaaagagaagggagaacaacctagaaagctgcgattttcattgttaaggtaagggtgagactaacttgcaattctattaa 7769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 42400 - 42320
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||| | |||||| | || |||||| ||   ||||||||||||| ||||| ||||||||    
T  42400 gagaaaaagccaagagaagggagaaacacctagagagttgcgattttcattgttaaggtaagggtgggactaacattcaat 42320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 190484 - 190610
Alignment:
Q  67 taaggtaagggtgagactagc-attcaattctattaatatgtataattttgatagttgtatttaacaag-tgtaggattgaattagagaagttggagaat 164  Q
    ||||||||||||||||||| | ||||| ||||||||||   ||||||| |||||| | || ||| |||| ||||||||||||||||| ||||| || ||     
T  190484 taaggtaagggtgagactaacgattcagttctattaattcatataattctgatag-tctaattagcaagttgtaggattgaattagaaaagttaga-aac 190581  T
Q  165 tagggttaaagtgagaaattgaggattaa 193  Q
    ||||||||| | ||| |||||| ||||||    
T  190582 tagggttaatgagaggaattgatgattaa 190610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 1973 - 2044
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagacta 85  Q
    |||||||| |||||||||||||||| ||||| ||  |||| |||||| ||   |||||||||||||||||||    
T  1973 gagaaaaagccaagagaagggagaacaatctcgaaagctgcgattttcattgttaaggtaagggtgagacta 2044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 84457 - 84577
Alignment:
Q  68 aaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtaggattgaattagagaagttggagaattag 167  Q
    |||||||||||||||||||||||||||  ||||||  | | ||||| ||||  ||   ||||||||| |||||||| | |||  |||||||||||||||     
T  84457 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgattac-tttaacaagagtaggattaatttaaggaagttggagaatta- 84553  T
Q  168 ggttaaagtgagaaattgaggatt 191  Q
    |||||||||||| |||||| ||||    
T  84554 ggttaaagtgaggaattgatgatt 84577  T

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Target: scaffold1434 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 212 - 122
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatc-cataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| ||||||||||||||||| | ||||   |||| |||||| |||  |||||||||||||||||||| | || ||||||||||||    
T  212 gagaaaaagccaagagaagggagaaagacctaggaggctgcgattttcatcttataaggtaagggtgagactaactttgcaattctattaa 122  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 47732 - 47789
Alignment:
Q  135 tgtaggattgaattagagaagttggagaattagggttaaagtgagaaattgaggattaa 193  Q
    ||||||||||||||||| |||||||| || ||||||||| | |||||||||| ||||||    
T  47732 tgtaggattgaattagaaaagttgga-aactagggttaatgagagaaattgatgattaa 47789  T

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Target: scaffold1257 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 1460 - 1537
Alignment:
Q  26 agagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||||||||| | |||||  ||||  ||||||||| ||||||||||||| |||||| | || ||||||||||||    
T  1460 agagaagggagaaagacctagaaagctgcaattttgatctataaggtaagggttagactaactttgcaattctattaa 1537  T

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Target: scaffold0876 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 2265 - 2318
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||| |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  2265 gctgcgattttgatctataaggtaagggtgagactaaccttgcaattctattaa 2318  T

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Target: scaffold0810 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 4853 - 4764
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagc-attcaattctattaa 102  Q
    |||||||| |||||||||||||| || | |||||| |||| |||||  ||   ||||||||||||||||||| |  ||||||||||||||    
T  4853 gagaaaaagccaagagaagggaggaagacctagagagctgcgatttcaatttctaaggtaagggtgagactaacttttcaattctattaa 4764  T

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Target: scaffold0253 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 3805 - 3752
Alignment:
Q  50 gctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    ||||||||||| ||| |||||||||||||||||||| | || ||||||||||||    
T  3805 gctgtgattttcatcaataaggtaagggtgagactaactttgcaattctattaa 3752  T

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Target: scaffold0230 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 14951 - 14871
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctag-agtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| || |||| |||||||| | ||||| ||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14951 gagaaaaagccgagaggagggagaaga-tctaggagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14871  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 4004 - 4076
Alignment:
Q  67 taaggtaagggtgagactagcattcaattctattaatatgtataattttgatagttgtatttaacaagtgtagg 140  Q
    ||||||||||||||||||| ||||||||||| ||||  || || ||| |||| ||| ||||||||| |||||||    
T  4004 taaggtaagggtgagactaacattcaattctcttaagctg-atgattctgatggttatatttaacatgtgtagg 4076  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 5444 - 5355
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcatt-caattctattaa 102  Q
    |||||||| |||||||||| |||||  |  | ||| | || |||||||||| |||||||||||||||||||| | || ||||||||||||    
T  5444 gagaaaaagccaagagaagagagaaccaagtggagggttgcgattttgatctataaggtaagggtgagactaactttgcaattctattaa 5355  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 7346 - 7386
Alignment:
Q  154 agttggagaattagggttaaagtgagaaattgaggattaat 194  Q
    ||||||| |||||||||||| | ||||||||||||||||||    
T  7346 agttggaaaattagggttaatgagagaaattgaggattaat 7386  T

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Target: scaffold0481 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 99 - 51
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  99 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 51  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 14363 - 14315
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  14363 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 14315  T

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Target: scaffold0319 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 6216 - 6136
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| ||||||||||||||||  | |||||| |||  |||||| ||   |||||||| |||||||||| ||||||||    
T  6216 gagaaaaagccaagagaagggagaagcacctagagagctacgattttcattgttaaggtaaaggtgagactaacattcaat 6136  T

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Target: scaffold0297 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 2897 - 2945
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  2897 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 2945  T

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Target: scaffold0134 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 38791 - 38743
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  38791 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 38743  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 51307 - 51355
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  51307 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 51355  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 427 - 503
Alignment:
Q  18 aaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||| ||||||||||||||||| | |||||| | || |||||   || |||||||||||||||||| | ||||||||    
T  427 aaaagccaagagaagggagaaacacctagagagttgcgatttcattctataaggtaagggtgagacgaacattcaat 503  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 41369 - 41321
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  41369 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 41321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 56199 - 56247
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  56199 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 56247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 95380 - 95332
Alignment:
Q  46 gagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| |||||| ||| |||||||||||||| ||||| ||||||||    
T  95380 gagtgctgcgattttcatctataaggtaagggtgggactaacattcaat 95332  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 158786 - 158706
Alignment:
Q  14 gagaaaaaaccaagagaagggagaaaaatctagagtgctgtgattttgatccataaggtaagggtgagactagcattcaat 94  Q
    |||||||| | ||||||||||||||| | |||||  || | ||||||||   |||||||||||||| ||||| ||||||||    
T  158786 gagaaaaagctaagagaagggagaaagacctagaaagcggcgattttgagtaataaggtaagggtgggactaacattcaat 158706  T

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