View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9853_high_19 (Length: 244)
Name: NF9853_high_19
Description: NF9853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9853_high_19 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 45991454 - 45991679
Alignment:
| Q |
19 |
tgttgagaatcaaagtgacagaaatatcaaggtgttgagaactaacggaggtggtgaatatgcatccaaagcatttaaagcttttagtgtaaatcatgta |
118 |
Q |
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| T |
45991454 |
tgttgagaatcaaagtgacagaaatatcaaggtgttgagaactaacggaggtgatgaatatgcatccaaagcatttaaagcttttagtgtaaatcatgta |
45991553 |
T |
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| Q |
119 |
ttcaacatgaagtccactgctccatgcactccacaacataataaattggatgaaagaaggaataaaacaaacaattctatagatgttagatgtatgttaa |
218 |
Q |
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| T |
45991554 |
ttcaacatgaagtccactgttccatacactccacaacataataaattggatgaaagaaggaataaaacaaacaattctatagatgttagatgtatgttaa |
45991653 |
T |
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| Q |
219 |
agcaaagaaacacactacattcattt |
244 |
Q |
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| T |
45991654 |
agcaaagaaacacactacattcattt |
45991679 |
T |
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