View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9853_low_63 (Length: 228)
Name: NF9853_low_63
Description: NF9853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9853_low_63 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 31219681 - 31219447
Alignment:
| Q |
1 |
gaaatctaaacttgtataccacttatatacatgtgtacgaagagtgctatacttagatcctttgaatcacaaaacgtttcaatgtccatgaatcacaata |
100 |
Q |
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| T |
31219681 |
gaaatataaacttgtataccacttatatacatatgtacgaagagtgctatacttagattctttgaatcacaaaacgtttcaatgtccatgaatcacaata |
31219582 |
T |
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| Q |
101 |
gcgtgagttctaagactaagcct-------acaaaatgttgaaaacgtgaattgctttatttacctttcttccaagaagaggaaaactttcaatgacatt |
193 |
Q |
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| T |
31219581 |
gcgtgagttctaagactaagcctaaacatgacaaaatgttgaaaacgtgaattgctttatttacctttcttccaagaagagtaaaactttcaacgacatt |
31219482 |
T |
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| Q |
194 |
ataaaagtgatgggatgaaacatgaattgatgagt |
228 |
Q |
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|||||||||||||||||||||||| |||||||||| |
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| T |
31219481 |
ataaaagtgatgggatgaaacatggattgatgagt |
31219447 |
T |
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