View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9856_high_32 (Length: 242)
Name: NF9856_high_32
Description: NF9856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9856_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 32288979 - 32288768
Alignment:
| Q |
15 |
caaaggtaagcaaagataaactttttcttttcccagccagcaagggaattttctttagcagagtcataaacaaaatataagagaaacaaaactagaattg |
114 |
Q |
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| T |
32288979 |
caaaggtaagcaaagataaactttttcttttcccagccagcaagggaattttctttagcagagtcataaacaaaatataagagaaacaaaactagaattg |
32288880 |
T |
|
| Q |
115 |
tatttcttacttgtttctacaattccttataacaaaatcaatcaacccttaaactgaaagagaccattaccacactcacacacaatccaacctatatact |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32288879 |
tatttcttacttgtttctacaattccttataacaaaatcaatcaacccttaaactgaaagagaccattaccacactcacacacaatccaacctatatact |
32288780 |
T |
|
| Q |
215 |
gttcaagtagtg |
226 |
Q |
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|||||||||||| |
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| T |
32288779 |
gttcaagtagtg |
32288768 |
T |
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