View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9856_high_33 (Length: 240)
Name: NF9856_high_33
Description: NF9856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9856_high_33 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 44623188 - 44623026
Alignment:
| Q |
62 |
tgtcatcctaggcgatcaactttctctgtcttctaaacttcaatttattgctcaaaatattttaaactcttgctaaaagttatacttcaacttttcctca |
161 |
Q |
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| T |
44623188 |
tgtcatcctaggcgatcaactttctctgtcttctaaacttcaatttattgctcaaaacattttaaactcttgctaaaagttatacttcaacttttcctca |
44623089 |
T |
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| Q |
162 |
tgcattttttatgccacattttatcactaattatcaaggatagtaaaaactttcgaagcttat |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
44623088 |
tgcattttttatgccacattttatcactaattatcaaggatagtaaaaactttctaagcttat |
44623026 |
T |
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