View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9857_high_20 (Length: 252)

Name: NF9857_high_20
Description: NF9857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9857_high_20
NF9857_high_20
[»] chr8 (53 HSPs)
chr8 (1-252)||(28981518-28981769)
chr8 (1-252)||(28986738-28986989)
chr8 (1-252)||(9204440-9204690)
chr8 (1-252)||(14766379-14766630)
chr8 (1-202)||(1051431-1051633)
chr8 (1-250)||(3223774-3224023)
chr8 (1-202)||(4519868-4520069)
chr8 (1-203)||(6588859-6589061)
chr8 (1-202)||(22458888-22459089)
chr8 (1-227)||(27364089-27364314)
chr8 (1-202)||(7003209-7003410)
chr8 (133-252)||(23223787-23223906)
chr8 (1-223)||(27346453-27346675)
chr8 (134-237)||(16265973-16266076)
chr8 (132-252)||(14564417-14564537)
chr8 (132-252)||(14567950-14568070)
chr8 (133-227)||(16886413-16886506)
chr8 (1-75)||(23117968-23118042)
chr8 (135-227)||(14735935-14736026)
chr8 (135-202)||(26485154-26485221)
chr8 (133-203)||(10955824-10955894)
chr8 (133-203)||(14745657-14745727)
chr8 (1-203)||(214736-214938)
chr8 (1-203)||(237316-237518)
chr8 (1-203)||(728359-728561)
chr8 (1-203)||(800860-801062)
chr8 (1-203)||(807174-807376)
chr8 (1-203)||(852254-852456)
chr8 (115-202)||(20004849-20004936)
chr8 (1-223)||(35541788-35542010)
chr8 (1-203)||(37240369-37240571)
chr8 (134-202)||(40143480-40143548)
chr8 (133-203)||(43688310-43688380)
chr8 (133-203)||(10947742-10947812)
chr8 (133-203)||(11391745-11391815)
chr8 (1-71)||(14594030-14594100)
chr8 (1-202)||(12913390-12913593)
chr8 (1-202)||(27908729-27908932)
chr8 (1-202)||(27955148-27955351)
chr8 (99-203)||(29304767-29304872)
chr8 (118-203)||(29329101-29329187)
chr8 (110-203)||(41008618-41008711)
chr8 (136-205)||(19987329-19987398)
chr8 (99-203)||(29298212-29298317)
chr8 (1-66)||(43688178-43688243)
chr8 (136-224)||(20007208-20007295)
chr8 (136-227)||(36444874-36444966)
chr8 (136-203)||(13361295-13361362)
chr8 (140-203)||(19297449-19297512)
chr8 (122-220)||(19860467-19860566)
chr8 (135-202)||(20258147-20258214)
chr8 (135-202)||(21044777-21044844)
chr8 (1-65)||(14415849-14415913)
[»] chr3 (59 HSPs)
chr3 (1-252)||(28759641-28759892)
chr3 (1-252)||(14844290-14844540)
chr3 (1-252)||(50141896-50142146)
chr3 (1-203)||(29494328-29494530)
chr3 (1-240)||(50655145-50655385)
chr3 (1-203)||(51246517-51246718)
chr3 (1-202)||(47121919-47122119)
chr3 (1-202)||(47129287-47129487)
chr3 (113-252)||(43723216-43723355)
chr3 (132-252)||(2498169-2498290)
chr3 (1-227)||(16413434-16413660)
chr3 (1-159)||(38743686-38743844)
chr3 (1-203)||(30099527-30099729)
chr3 (1-202)||(10382713-10382915)
chr3 (135-227)||(21353092-21353183)
chr3 (178-252)||(3109416-3109490)
chr3 (1-203)||(9771094-9771297)
chr3 (1-203)||(21150662-21150864)
chr3 (1-203)||(45612428-45612630)
chr3 (62-202)||(15081230-15081370)
chr3 (140-227)||(54832361-54832448)
chr3 (1-203)||(10768530-10768732)
chr3 (1-223)||(9690624-9690846)
chr3 (1-203)||(48773793-48773995)
chr3 (52-173)||(10411418-10411539)
chr3 (124-223)||(29551829-29551928)
chr3 (133-203)||(54090911-54090981)
chr3 (127-205)||(12960545-12960624)
chr3 (136-227)||(17497146-17497237)
chr3 (125-203)||(14293661-14293739)
chr3 (125-203)||(14299288-14299366)
chr3 (140-202)||(51854279-51854341)
chr3 (140-202)||(53570408-53570470)
chr3 (43-202)||(3552831-3552991)
chr3 (136-220)||(11304900-11304985)
chr3 (116-205)||(12355178-12355267)
chr3 (116-216)||(12536866-12536966)
chr3 (101-227)||(13692856-13692980)
chr3 (117-223)||(15934075-15934181)
chr3 (117-223)||(15954080-15954186)
chr3 (135-202)||(30596037-30596104)
chr3 (136-227)||(46070263-46070354)
chr3 (59-203)||(891704-891849)
chr3 (122-159)||(12256516-12256553)
chr3 (136-205)||(18127716-18127785)
chr3 (136-205)||(18135486-18135555)
chr3 (122-159)||(18718340-18718377)
chr3 (99-202)||(49164036-49164141)
chr3 (114-209)||(16822942-16823037)
chr3 (135-227)||(20376395-20376487)
chr3 (135-205)||(11964084-11964154)
chr3 (136-222)||(14570768-14570853)
chr3 (1-67)||(49163939-49164005)
chr3 (43-92)||(6926897-6926946)
chr3 (136-205)||(15519435-15519504)
chr3 (132-200)||(8373096-8373164)
chr3 (136-227)||(11643930-11644022)
chr3 (1-69)||(16330925-16330993)
chr3 (135-207)||(32387190-32387262)
[»] chr1 (51 HSPs)
chr1 (1-252)||(48428642-48428893)
chr1 (1-203)||(39188801-39189003)
chr1 (1-203)||(37676196-37676398)
chr1 (1-203)||(37682867-37683069)
chr1 (1-227)||(38907154-38907379)
chr1 (1-246)||(19045383-19045627)
chr1 (1-227)||(20076044-20076270)
chr1 (1-203)||(42626988-42627190)
chr1 (1-203)||(20276375-20276578)
chr1 (1-165)||(18025914-18026078)
chr1 (135-227)||(36211152-36211242)
chr1 (133-202)||(20571664-20571733)
chr1 (133-202)||(29150362-29150431)
chr1 (1-223)||(18418916-18419138)
chr1 (132-246)||(20395998-20396113)
chr1 (1-203)||(17150107-17150308)
chr1 (133-202)||(20293599-20293668)
chr1 (133-202)||(20300230-20300299)
chr1 (1-213)||(36917906-36918120)
chr1 (1-203)||(41052532-41052734)
chr1 (101-209)||(31926445-31926553)
chr1 (135-203)||(6741442-6741509)
chr1 (124-227)||(21921706-21921809)
chr1 (114-208)||(30490580-30490674)
chr1 (114-223)||(19336715-19336824)
chr1 (1-203)||(28555626-28555828)
chr1 (135-203)||(31534425-31534492)
chr1 (135-203)||(31563142-31563209)
chr1 (1-76)||(9292491-9292566)
chr1 (114-223)||(23713144-23713253)
chr1 (124-227)||(29601392-29601495)
chr1 (1-202)||(39095113-39095314)
chr1 (178-227)||(24425003-24425051)
chr1 (114-209)||(21699047-21699142)
chr1 (99-202)||(24237557-24237661)
chr1 (124-203)||(19777803-19777882)
chr1 (116-159)||(23065869-23065912)
chr1 (124-159)||(29553640-29553675)
chr1 (98-227)||(36615816-36615942)
chr1 (98-227)||(43089267-43089393)
chr1 (114-223)||(23634461-23634570)
chr1 (136-205)||(16882689-16882758)
chr1 (140-208)||(21963935-21964003)
chr1 (2-69)||(19853849-19853916)
chr1 (135-201)||(21736086-21736152)
chr1 (190-227)||(12203579-12203615)
chr1 (136-205)||(19853983-19854052)
chr1 (140-205)||(19860122-19860187)
chr1 (136-205)||(21665126-21665195)
chr1 (1-69)||(24080380-24080448)
chr1 (135-203)||(24080514-24080581)
[»] chr6 (36 HSPs)
chr6 (1-252)||(15331228-15331478)
chr6 (1-252)||(17310455-17310705)
chr6 (1-203)||(25559080-25559281)
chr6 (1-203)||(25314803-25315004)
chr6 (1-203)||(26202297-26202498)
chr6 (133-227)||(24363486-24363579)
chr6 (133-227)||(24370077-24370170)
chr6 (132-227)||(10469870-10469965)
chr6 (132-227)||(13127418-13127513)
chr6 (1-203)||(19095945-19096147)
chr6 (114-209)||(18315109-18315204)
chr6 (135-203)||(33875876-33875943)
chr6 (1-203)||(93675-93876)
chr6 (133-203)||(27768279-27768349)
chr6 (45-203)||(4107420-4107579)
chr6 (135-203)||(16222817-16222884)
chr6 (135-203)||(25464764-25464831)
chr6 (1-203)||(30798843-30799045)
chr6 (1-202)||(8068852-8069053)
chr6 (124-203)||(14615431-14615510)
chr6 (131-205)||(19587728-19587803)
chr6 (178-227)||(1537464-1537512)
chr6 (127-203)||(14374518-14374595)
chr6 (132-227)||(1071583-1071679)
chr6 (132-203)||(29926615-29926686)
chr6 (116-159)||(14132229-14132273)
chr6 (151-223)||(18787060-18787132)
chr6 (122-209)||(22797651-22797738)
chr6 (98-224)||(23020505-23020628)
chr6 (1-65)||(29926484-29926548)
chr6 (136-223)||(23232544-23232631)
chr6 (1-71)||(18786900-18786970)
chr6 (135-205)||(19819836-19819906)
chr6 (122-159)||(2709304-2709341)
chr6 (138-210)||(19468798-19468870)
chr6 (128-227)||(24721552-24721651)
[»] chr2 (40 HSPs)
chr2 (1-252)||(23887482-23887733)
chr2 (1-252)||(21605537-21605787)
chr2 (1-252)||(70603-70854)
chr2 (1-203)||(24480737-24480939)
chr2 (1-252)||(4070630-4070881)
chr2 (1-202)||(11359381-11359584)
chr2 (1-203)||(27038035-27038236)
chr2 (1-252)||(1062493-1062745)
chr2 (1-252)||(1067887-1068139)
chr2 (1-202)||(20850982-20851183)
chr2 (1-227)||(22012253-22012479)
chr2 (1-203)||(27730279-27730481)
chr2 (1-223)||(44090208-44090430)
chr2 (1-203)||(34843-35045)
chr2 (1-203)||(4078212-4078414)
chr2 (109-225)||(35243678-35243794)
chr2 (1-203)||(11466812-11467014)
chr2 (116-203)||(19702629-19702716)
chr2 (127-203)||(22812946-22813022)
chr2 (140-227)||(17582600-17582687)
chr2 (127-205)||(20724966-20725045)
chr2 (114-222)||(19036432-19036541)
chr2 (1-203)||(2385062-2385264)
chr2 (1-203)||(24425981-24426183)
chr2 (1-203)||(27272941-27273143)
chr2 (140-202)||(30195653-30195715)
chr2 (150-203)||(20938520-20938573)
chr2 (101-205)||(23291862-23291966)
chr2 (101-205)||(23333502-23333606)
chr2 (136-223)||(25106584-25106672)
chr2 (136-223)||(8889085-8889172)
chr2 (140-203)||(14564760-14564823)
chr2 (136-223)||(20649049-20649136)
chr2 (136-219)||(22860941-22861024)
chr2 (132-202)||(15642438-15642508)
chr2 (117-201)||(24668966-24669050)
chr2 (141-202)||(20913470-20913530)
chr2 (136-205)||(24653289-24653358)
chr2 (136-205)||(24659746-24659815)
chr2 (136-216)||(25268175-25268255)
[»] chr4 (60 HSPs)
chr4 (1-252)||(26396426-26396676)
chr4 (1-203)||(11937910-11938112)
chr4 (1-227)||(39265376-39265603)
chr4 (1-203)||(23435121-23435323)
chr4 (1-227)||(29381881-29382108)
chr4 (1-246)||(3259090-3259335)
chr4 (1-203)||(44656909-44657112)
chr4 (1-202)||(29447817-29448019)
chr4 (1-227)||(7359986-7360211)
chr4 (1-237)||(5939663-5939900)
chr4 (1-202)||(29454501-29454703)
chr4 (1-203)||(44662830-44663041)
chr4 (1-205)||(45141686-45141891)
chr4 (135-227)||(50083092-50083182)
chr4 (1-227)||(52501288-52501514)
chr4 (1-202)||(1584647-1584848)
chr4 (1-227)||(19127458-19127686)
chr4 (135-203)||(51931325-51931393)
chr4 (114-223)||(30239971-30240080)
chr4 (7-203)||(37622448-37622644)
chr4 (1-203)||(391905-392107)
chr4 (116-227)||(53904468-53904579)
chr4 (114-221)||(18272215-18272321)
chr4 (135-203)||(3265762-3265829)
chr4 (127-203)||(14063669-14063745)
chr4 (1-173)||(21397554-21397725)
chr4 (1-223)||(33222080-33222303)
chr4 (1-69)||(47870336-47870404)
chr4 (135-203)||(49239987-49240054)
chr4 (135-203)||(49748701-49748768)
chr4 (135-202)||(900467-900534)
chr4 (1-203)||(31665788-31665989)
chr4 (99-202)||(42221267-42221370)
chr4 (99-203)||(33097930-33098035)
chr4 (122-203)||(41528233-41528314)
chr4 (127-199)||(15325827-15325899)
chr4 (116-223)||(16228246-16228353)
chr4 (1-159)||(20890105-20890264)
chr4 (1-203)||(47871571-47871774)
chr4 (101-223)||(10783410-10783531)
chr4 (101-223)||(10972061-10972182)
chr4 (116-159)||(16999352-16999395)
chr4 (136-223)||(17177317-17177404)
chr4 (116-223)||(18165413-18165519)
chr4 (1-202)||(20895732-20895934)
chr4 (114-202)||(14991772-14991860)
chr4 (114-202)||(15004280-15004368)
chr4 (140-203)||(13480150-13480213)
chr4 (1-71)||(41528364-41528434)
chr4 (1-203)||(42955186-42955388)
chr4 (140-203)||(45958884-45958947)
chr4 (140-203)||(54825315-54825378)
chr4 (110-159)||(16485592-16485641)
chr4 (1-71)||(17177172-17177242)
chr4 (136-205)||(14555214-14555283)
chr4 (134-203)||(21882463-21882532)
chr4 (1-69)||(900333-900401)
chr4 (99-202)||(30396985-30397089)
chr4 (1-69)||(42221170-42221238)
chr4 (135-207)||(49051918-49051990)
[»] chr7 (67 HSPs)
chr7 (1-252)||(1318557-1318806)
chr7 (1-252)||(49151378-49151629)
chr7 (1-252)||(49158068-49158319)
chr7 (1-252)||(40922050-40922302)
chr7 (1-202)||(8196379-8196580)
chr7 (1-203)||(2025402-2025604)
chr7 (1-227)||(643339-643565)
chr7 (1-202)||(42059344-42059545)
chr7 (1-203)||(32628194-32628399)
chr7 (43-246)||(18436327-18436529)
chr7 (1-202)||(13452980-13453181)
chr7 (43-246)||(11340573-11340776)
chr7 (1-202)||(21758084-21758285)
chr7 (98-202)||(8213082-8213184)
chr7 (1-246)||(30601997-30602242)
chr7 (133-227)||(26112912-26113005)
chr7 (133-227)||(26119529-26119622)
chr7 (133-227)||(33405574-33405668)
chr7 (135-252)||(5186373-5186490)
chr7 (133-227)||(26089107-26089200)
chr7 (1-73)||(20018982-20019054)
chr7 (1-203)||(11879857-11880059)
chr7 (1-203)||(12399019-12399220)
chr7 (132-250)||(11298828-11298948)
chr7 (132-250)||(11307192-11307312)
chr7 (133-202)||(37288389-37288458)
chr7 (1-203)||(13963182-13963384)
chr7 (114-209)||(16475265-16475360)
chr7 (114-224)||(15436686-15436796)
chr7 (135-224)||(15085087-15085175)
chr7 (104-203)||(2439776-2439876)
chr7 (116-227)||(10520727-10520838)
chr7 (116-227)||(11854533-11854644)
chr7 (114-209)||(15143151-15143246)
chr7 (122-203)||(6412778-6412859)
chr7 (135-203)||(750768-750835)
chr7 (134-198)||(2387764-2387828)
chr7 (135-203)||(40683941-40684008)
chr7 (135-203)||(48987100-48987167)
chr7 (136-227)||(15097075-15097166)
chr7 (136-227)||(15103451-15103542)
chr7 (1-159)||(15632151-15632308)
chr7 (1-71)||(81376-81446)
chr7 (114-223)||(14580674-14580783)
chr7 (99-201)||(23521869-23521971)
chr7 (133-202)||(12454983-12455052)
chr7 (99-203)||(15839492-15839595)
chr7 (123-159)||(35961922-35961958)
chr7 (114-209)||(45186387-45186482)
chr7 (140-203)||(46175250-46175313)
chr7 (133-203)||(13020629-13020699)
chr7 (133-203)||(13026836-13026906)
chr7 (122-159)||(11219317-11219354)
chr7 (140-197)||(11898495-11898552)
chr7 (133-202)||(12462439-12462508)
chr7 (99-203)||(16843049-16843154)
chr7 (140-237)||(49159693-49159790)
chr7 (136-223)||(14168667-14168753)
chr7 (136-223)||(14172914-14173000)
chr7 (1-71)||(14168829-14168899)
chr7 (1-71)||(14173076-14173146)
chr7 (178-223)||(81212-81257)
chr7 (136-205)||(12429783-12429852)
chr7 (101-217)||(12555368-12555483)
chr7 (136-205)||(46347896-46347965)
chr7 (1-69)||(13026704-13026772)
chr7 (135-207)||(19463600-19463672)
[»] chr5 (53 HSPs)
chr5 (1-252)||(22247356-22247606)
chr5 (1-252)||(14881432-14881682)
chr5 (1-252)||(14888109-14888359)
chr5 (1-203)||(38014475-38014677)
chr5 (1-203)||(24799548-24799750)
chr5 (1-252)||(14614068-14614319)
chr5 (1-252)||(30781806-30782057)
chr5 (1-202)||(1110847-1111048)
chr5 (1-227)||(25853655-25853882)
chr5 (1-202)||(17938050-17938251)
chr5 (1-227)||(25847074-25847301)
chr5 (1-203)||(19799508-19799709)
chr5 (1-203)||(33536833-33537035)
chr5 (1-227)||(40010117-40010342)
chr5 (133-227)||(5455359-5455452)
chr5 (1-223)||(19508905-19509128)
chr5 (135-227)||(24008926-24009017)
chr5 (1-227)||(22501716-22501942)
chr5 (1-223)||(22508297-22508519)
chr5 (135-227)||(10687018-10687108)
chr5 (1-203)||(5581456-5581658)
chr5 (114-209)||(21889506-21889601)
chr5 (1-202)||(15462210-15462411)
chr5 (116-223)||(23560721-23560827)
chr5 (99-227)||(7772790-7772919)
chr5 (133-202)||(20341409-20341478)
chr5 (133-202)||(20348013-20348082)
chr5 (1-202)||(11995880-11996082)
chr5 (5-203)||(29745761-29745959)
chr5 (114-209)||(15193131-15193226)
chr5 (1-202)||(37539123-37539325)
chr5 (135-203)||(43029915-43029982)
chr5 (2-202)||(18894165-18894364)
chr5 (140-237)||(598138-598235)
chr5 (116-227)||(428132-428243)
chr5 (1-202)||(37546667-37546869)
chr5 (99-203)||(23081171-23081277)
chr5 (133-202)||(18567460-18567529)
chr5 (115-209)||(10036067-10036161)
chr5 (116-223)||(20843978-20844084)
chr5 (1-69)||(39608174-39608242)
chr5 (132-202)||(18940383-18940453)
chr5 (132-202)||(23544029-23544099)
chr5 (116-205)||(22237017-22237106)
chr5 (114-202)||(23443371-23443459)
chr5 (1-69)||(19801198-19801266)
chr5 (99-202)||(26651278-26651382)
chr5 (99-202)||(26922863-26922967)
chr5 (136-223)||(21830469-21830556)
chr5 (99-202)||(25420706-25420811)
chr5 (99-203)||(19799039-19799143)
chr5 (135-207)||(5337518-5337590)
chr5 (1-69)||(25420609-25420677)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-252)||(50793-51045)
[»] scaffold0555 (2 HSPs)
scaffold0555 (49-227)||(11-189)
scaffold0555 (114-209)||(2325-2420)
[»] scaffold0443 (1 HSPs)
scaffold0443 (1-202)||(14198-14399)
[»] scaffold0523 (1 HSPs)
scaffold0523 (135-240)||(6849-6954)
[»] scaffold0091 (2 HSPs)
scaffold0091 (110-224)||(21891-22005)
scaffold0091 (110-224)||(26088-26202)
[»] scaffold0066 (1 HSPs)
scaffold0066 (26-203)||(3096-3274)
[»] scaffold0560 (1 HSPs)
scaffold0560 (1-227)||(162-390)
[»] scaffold0154 (1 HSPs)
scaffold0154 (135-223)||(17568-17655)
[»] scaffold0054 (2 HSPs)
scaffold0054 (114-209)||(59586-59681)
scaffold0054 (114-209)||(61150-61244)
[»] scaffold0323 (1 HSPs)
scaffold0323 (116-203)||(8189-8276)
[»] scaffold0004 (2 HSPs)
scaffold0004 (116-203)||(322006-322093)
scaffold0004 (116-199)||(327694-327777)
[»] scaffold0261 (1 HSPs)
scaffold0261 (114-224)||(8395-8504)
[»] scaffold0214 (1 HSPs)
scaffold0214 (1-202)||(14389-14590)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-227)||(32361-32589)
[»] scaffold0076 (3 HSPs)
scaffold0076 (99-203)||(946-1050)
scaffold0076 (120-203)||(50849-50932)
scaffold0076 (1-69)||(849-917)
[»] scaffold0923 (1 HSPs)
scaffold0923 (116-227)||(766-877)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-223)||(16863-17085)
[»] scaffold0205 (1 HSPs)
scaffold0205 (114-227)||(28189-28303)
[»] scaffold0173 (2 HSPs)
scaffold0173 (117-223)||(2234-2340)
scaffold0173 (1-69)||(2119-2187)
[»] scaffold0191 (1 HSPs)
scaffold0191 (133-202)||(10674-10743)
[»] scaffold0102 (2 HSPs)
scaffold0102 (169-246)||(11427-11504)
scaffold0102 (136-223)||(30780-30867)
[»] scaffold0457 (1 HSPs)
scaffold0457 (1-203)||(11394-11596)
[»] scaffold0193 (1 HSPs)
scaffold0193 (114-218)||(2058-2161)
[»] scaffold0089 (1 HSPs)
scaffold0089 (135-203)||(17693-17760)
[»] scaffold0097 (1 HSPs)
scaffold0097 (127-205)||(28795-28874)
[»] scaffold0402 (1 HSPs)
scaffold0402 (114-223)||(15875-15984)
[»] scaffold0050 (1 HSPs)
scaffold0050 (114-223)||(13758-13867)
[»] scaffold0751 (1 HSPs)
scaffold0751 (116-227)||(1346-1456)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-202)||(2060-2262)
[»] scaffold0661 (1 HSPs)
scaffold0661 (114-224)||(3181-3291)
[»] scaffold0334 (1 HSPs)
scaffold0334 (124-227)||(9398-9500)
[»] scaffold0114 (1 HSPs)
scaffold0114 (136-227)||(46975-47066)
[»] scaffold0035 (3 HSPs)
scaffold0035 (116-227)||(1475-1585)
scaffold0035 (101-223)||(11342-11462)
scaffold0035 (1-69)||(11241-11309)
[»] scaffold0015 (1 HSPs)
scaffold0015 (116-203)||(170960-171047)
[»] scaffold0326 (2 HSPs)
scaffold0326 (114-223)||(4509-4618)
scaffold0326 (114-223)||(19691-19800)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-71)||(1685-1755)
[»] scaffold0019 (2 HSPs)
scaffold0019 (99-202)||(137963-138068)
scaffold0019 (1-69)||(137866-137934)
[»] scaffold0001 (2 HSPs)
scaffold0001 (133-202)||(511754-511823)
scaffold0001 (114-221)||(448789-448896)
[»] scaffold1290 (1 HSPs)
scaffold1290 (114-209)||(401-496)
[»] scaffold0924 (1 HSPs)
scaffold0924 (114-221)||(3190-3297)
[»] scaffold0244 (2 HSPs)
scaffold0244 (141-209)||(14579-14646)
scaffold0244 (141-209)||(770-837)
[»] scaffold0556 (1 HSPs)
scaffold0556 (136-223)||(4124-4211)
[»] scaffold0506 (1 HSPs)
scaffold0506 (124-203)||(9167-9246)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-203)||(11880-12082)
[»] scaffold0434 (2 HSPs)
scaffold0434 (114-224)||(468-578)
scaffold0434 (1-71)||(631-701)
[»] scaffold0301 (1 HSPs)
scaffold0301 (124-223)||(4161-4259)
[»] scaffold0220 (1 HSPs)
scaffold0220 (136-203)||(11321-11388)
[»] scaffold0156 (1 HSPs)
scaffold0156 (116-227)||(26530-26639)
[»] scaffold0137 (1 HSPs)
scaffold0137 (68-202)||(25471-25605)
[»] scaffold0078 (1 HSPs)
scaffold0078 (116-227)||(16561-16672)
[»] scaffold0706 (1 HSPs)
scaffold0706 (135-205)||(2511-2581)
[»] scaffold0011 (5 HSPs)
scaffold0011 (117-226)||(55891-56001)
scaffold0011 (136-205)||(252795-252864)
scaffold0011 (136-205)||(259401-259470)
scaffold0011 (136-223)||(155103-155191)
scaffold0011 (136-205)||(186972-187041)
[»] scaffold1032 (1 HSPs)
scaffold1032 (116-157)||(2828-2869)
[»] scaffold0139 (1 HSPs)
scaffold0139 (136-205)||(26840-26909)
[»] scaffold0118 (1 HSPs)
scaffold0118 (133-202)||(8085-8154)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-66)||(105077-105142)
scaffold0022 (140-207)||(105216-105283)
[»] scaffold0002 (1 HSPs)
scaffold0002 (136-205)||(371348-371417)
[»] scaffold1026 (1 HSPs)
scaffold1026 (135-203)||(177-244)
[»] scaffold0947 (1 HSPs)
scaffold0947 (139-223)||(3330-3414)
[»] scaffold0516 (1 HSPs)
scaffold0516 (136-224)||(7111-7199)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-203)||(15904-16105)
[»] scaffold0017 (2 HSPs)
scaffold0017 (114-209)||(2097-2192)
scaffold0017 (1-71)||(2245-2315)
[»] scaffold0010 (2 HSPs)
scaffold0010 (101-205)||(43252-43356)
scaffold0010 (101-205)||(48318-48422)
[»] scaffold1853 (1 HSPs)
scaffold1853 (114-188)||(5-79)
[»] scaffold0149 (1 HSPs)
scaffold0149 (114-224)||(14077-14187)
[»] scaffold0074 (1 HSPs)
scaffold0074 (122-157)||(21118-21153)
[»] scaffold0072 (1 HSPs)
scaffold0072 (122-157)||(56809-56844)
[»] scaffold0009 (1 HSPs)
scaffold0009 (135-202)||(254446-254513)
[»] scaffold0331 (1 HSPs)
scaffold0331 (118-223)||(19441-19546)
[»] scaffold0106 (2 HSPs)
scaffold0106 (136-202)||(45909-45975)
scaffold0106 (136-202)||(50182-50248)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-71)||(77546-77616)
[»] scaffold0192 (1 HSPs)
scaffold0192 (136-205)||(7553-7622)
[»] scaffold0180 (1 HSPs)
scaffold0180 (115-159)||(13376-13420)
[»] scaffold0167 (1 HSPs)
scaffold0167 (136-205)||(7890-7959)
[»] scaffold0039 (1 HSPs)
scaffold0039 (115-159)||(2965-3009)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-65)||(2795-2859)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-69)||(31613-31681)
[»] scaffold0096 (1 HSPs)
scaffold0096 (116-227)||(3816-3927)
[»] scaffold0037 (1 HSPs)
scaffold0037 (135-203)||(100834-100901)


Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 28981518 - 28981769
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28981518 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcaaaaactataat 28981617  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28981618 ttcatcataaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 28981717  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28981718 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 28981769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 28986738 - 28986989
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28986738 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcaaaaactataat 28986837  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28986838 ttcatcataaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 28986937  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28986938 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 28986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 9204690 - 9204440
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| |||||| |||  ||    
T  9204690 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacatcaaaa-ctaccat 9204592  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9204591 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 9204492  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| || |||||||||| | |||||||||| |||||||||||    
T  9204491 taattcagaatgaaaattgcacagcaaaaagggttcctctggttcttctctc 9204440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 14766379 - 14766630
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||  || |||||||||||||||||||||||||| ||| |||| ||||||||| |||    
T  14766379 cactccccaaatcagtttacagatgcaaattaactttctgtatacacttaaaacctatttctaacatcaaattcatgtttacaactccaaaaactacaat 14766478  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||||    
T  14766479 ttcaacataaaaaccaaaattcccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaaggaaatcccacccttacct 14766578  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  14766579 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 14766630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1051431 - 1051633
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||| ||| |||||| | | |||    
T  1051431 cactccccaaatcagtttacagatgcaaattaactttctgtatacacttagaacctatttctaacatcaaattcatgcttacaacatcaaaacccacaat 1051530  T
Q  101 ttcatcataaaatcc-aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||| ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  1051531 ttcaacataaaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacc 1051630  T
Q  200 tta 202  Q
    |||    
T  1051631 tta 1051633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 3224023 - 3223774
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||   ||||||||||||||| || |  |||||||||||||||||||||||||||  |  | | || ||||||  |  |     
T  3224023 cactccccaaatcagtttacagacataaattaactttctgtatgtacttagaacctatttctaacatcaaattcacacccacagctccaaaaatcaacaa 3223924  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  |||| ||||||||||||||||||||||| | |||| |||||| || ||||||||||| |||||||||||    
T  3223923 ttcaacataaaacccaaaatccccaattttcaccataacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttacct 3223824  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctc 250  Q
    || |||| ||||| ||||||||||||| | |||||||||| |||||||||    
T  3223823 taattcataatgaaaaatgcacagcaaaaagggttcctctggttcttctc 3223774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 4520069 - 4519868
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  4520069 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacttc-aaaactacaat 4519971  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| ||||  |||| ||||   |||||||| ||||||||| ||||||||||  | ||   ||| |||| ||||| ||||| ||||||||||    
T  4519970 ttcatcataaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttacc 4519871  T
Q  200 tta 202  Q
    |||    
T  4519870 tta 4519868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6588859 - 6589061
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||  ||||||||||  |||  |||| | ||||  || ||    
T  6588859 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttctagtatcaaattcacacttccaactcccaaaatcatcat 6588958  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  | ||   ||||| || ||||||||||| |||||||||||    
T  6588959 tccaacataaaatccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttacct 6589058  T
Q  201 tag 203  Q
    |||    
T  6589059 tag 6589061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22458888 - 22459089
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||| ||| |||||| ||||||| |||    
T  22458888 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacccatttctaacatcaaattcatgattacaacttc-aaaactacaat 22458986  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| ||||  |||| ||||   |||||||| ||||||||| ||||||||||  | ||   ||| |||| ||||| ||||| ||||||||||    
T  22458987 ttcatcataaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttacc 22459086  T
Q  200 tta 202  Q
    |||    
T  22459087 tta 22459089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27364089 - 27364314
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  ||||||||||||| | |||||||||||  ||   |||| | ||||  || ||    
T  27364089 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttcaagcatcaaattcacactcccaactcccaaaatcatcat 27364188  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || |||||||  |||||||||||||||  ||||||||||||||||||||||||||||  | ||   ||||| | ||  |||||||| |||||||||||    
T  27364189 tccaacataaaacacaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaaatcaataactacact-atatagtaaacctcacccttacct 27364287  T
Q  201 tagttcagaatgacaaatgcacagcaa 227  Q
    || |||||||||| |||||||||||||    
T  27364288 taattcagaatgaaaaatgcacagcaa 27364314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 7003410 - 7003209
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  |||  |||||||||| || |  ||||||||||||||| |||||||||||  |||  |||| | ||||  |  |     
T  7003410 cactccccaaatcagtttacagatataaaacaactttctgtatgtacttagaacctatttctagcatcaaattcacacttccaactcccaaaatcaacaa 7003311  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||   ||||| || ||||||||||| |||||||||||    
T  7003310 ttcaacataaaatccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaattcaataactacactattgaagtaaacctcacccttacct 7003211  T
Q  201 ta 202  Q
    ||    
T  7003210 ta 7003209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 23223906 - 23223787
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggg 232  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||| || ||||||| ||||||||||||| | ||    
T  23223906 ccaaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatttagaatgaaaaatgcacagcaaaaagg 23223807  T
Q  233 gttcctctagttcttctctc 252  Q
    ||||||||  ||||||||||    
T  23223806 gttcctctgattcttctctc 23223787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 27346453 - 27346675
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||  ||||||||||||||| |||| ||||||  ||   |||| | ||||  || ||    
T  27346453 cactccccaaatcagtttacagatataaattaactttctggatgcacttagaacctatttctagcatccaattcacactcccaactcccaaaatcatcat 27346552  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||| ||||||||||||||||  | ||||| ||||||||||||||||||||  | ||   ||||| || ||||||||||| ||| |||||||    
T  27346553 tccaacataaaacccaaaatccccaattttcatcaaaatctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacacttacct 27346652  T
Q  201 tagttcagaatgacaaatgcaca 223  Q
    || |||||||||| |||||||||    
T  27346653 taattcagaatgaaaaatgcaca 27346675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 16266076 - 16265973
Alignment:
Q  134 caaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacagggg 233  Q
    ||||||||||||||||||||||||||  ||||| |||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| | |||    
T  16266076 caaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgagaaatgcacagcaaaaaggg 16265977  T
Q  234 ttcc 237  Q
    ||||    
T  16265976 ttcc 16265973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 14564417 - 14564537
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacagg 231  Q
    ||||||||||| |||| |||||||||||  ||||  |||| | || ||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||    
T  14564417 accaaaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaatgcacagcaaaagg 14564516  T
Q  232 ggttcctctagttcttctctc 252  Q
    ||||||||| |||| ||||||    
T  14564517 ggttcctctggttcctctctc 14564537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 14567950 - 14568070
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacagg 231  Q
    ||||||||||| |||| |||||||||||  ||||  |||| | || ||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||    
T  14567950 accaaaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaatgcacagcaaaagg 14568049  T
Q  232 ggttcctctagttcttctctc 252  Q
    ||||||||| |||| ||||||    
T  14568050 ggttcctctggttcctctctc 14568070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 16886506 - 16886413
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||| ||||||||| |||||||||||||||||| |||||| || ||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  16886506 ccaaagcctgttaaaatcaaaatcagactttaaaatctacactattgaagtaaacatcacccttaccttagttcagaatga-aaatgcacagcaa 16886413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23117968 - 23118042
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattca 75  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||    
T  23117968 cactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaacctatttctaacatcaaattca 23118042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 14736026 - 14735935
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||| ||||||||| || |||||| || ||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  14736026 aaaacctgttaaactcaaattcagactttgaaatctacactattgaagtaaacctcacccttaccttagttcagaacga-aaatgcacagcaa 14735935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 26485221 - 26485154
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||    
T  26485221 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 26485154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 10955894 - 10955824
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  10955894 ccaaaacctgttaaacacaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttag 10955824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 14745727 - 14745657
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||||| |||||| |||||| || ||||||||||| ||||||||||||||    
T  14745727 ccaaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttag 14745657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 214736 - 214938
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | ||| || |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  214736 cactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 214833  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    |||||||| |||||||||||||||||||||    
T  214834 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaaccccacccttac 214933  T
Q  199 cttag 203  Q
    |||||    
T  214934 cttag 214938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 237518 - 237316
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | ||| || |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  237518 cactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 237421  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    |||||||| |||||||||||||||||||||    
T  237420 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaaccccacccttac 237321  T
Q  199 cttag 203  Q
    |||||    
T  237320 cttag 237316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 728359 - 728561
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | ||| || |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  728359 cactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 728456  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    |||||||| |||||||||||||||||||||    
T  728457 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaaccccacccttac 728556  T
Q  199 cttag 203  Q
    |||||    
T  728557 cttag 728561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 800860 - 801062
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | ||| || |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  800860 cactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 800957  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    |||||||| |||||||||||||||||||||    
T  800958 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaaccccacccttac 801057  T
Q  199 cttag 203  Q
    |||||    
T  801058 cttag 801062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 807376 - 807174
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | ||| || |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  807376 cactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 807279  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    |||||||| |||||||||||||||||||||    
T  807278 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaaccccacccttac 807179  T
Q  199 cttag 203  Q
    |||||    
T  807178 cttag 807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 852254 - 852456
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | ||| || |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  852254 cactccccaaatcagtttacagatacataagtaagtgt-tctatgcgaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 852351  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    |||||||| |||||||||||||||||||||    
T  852352 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaaccccacccttac 852451  T
Q  199 cttag 203  Q
    |||||    
T  852452 cttag 852456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 20004936 - 20004849
Alignment:
Q  115 caaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||||| || ||||||||||| |||||||||||||    
T  20004936 caaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctacactactgaagtaaacctcacccttacctta 20004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35541788 - 35542010
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | | |||| |||| | | |||||||||||||  || ||||| |||||||||| |  | |    
T  35541788 cactccccaaatcagtttacagatacataattaagtgt-tctatacaaccagaaaccaattctaacatcaaaaacaggcttacaacttcaaaatcc-tca 35541885  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || ||||||||||||||||  ||||||||   |||||   |||||||  ||||||||||| |||||||||    
T  35541886 ttctatcataaaaccccaaattcccaattcctcaccaaaacctgttaaatacaaaatcatgatttaataactacattcttgaagtaaacctcacccttac 35541985  T
Q  199 cttagttcagaatgacaaatgcaca 223  Q
    |||| |||||||||| |||||||||    
T  35541986 cttaattcagaatgaaaaatgcaca 35542010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 37240369 - 37240571
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  37240369 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 37240466  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| |  |||| ||||||| || | | ||||||||||||  |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  37240467 ttctatcataaaaccgcaaattcccaattcctcatctaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 37240566  T
Q  199 cttag 203  Q
    |||||    
T  37240567 cttag 37240571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 40143548 - 40143480
Alignment:
Q  134 caaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||||||  ||||| |||||| || ||||||||||| |||||||||||||    
T  40143548 caaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttacctta 40143480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 43688310 - 43688380
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||||  ||||| |||| | || ||||||||||| ||||||||||||||    
T  43688310 ccaaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttaccttag 43688380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 10947812 - 10947742
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||| ||||||||||||||||| ||||||  | ||||||||||| || || ||||||||    
T  10947812 ccaaaacctgttaaacacaaaatcagactttaaaatctacacaattgaagtaaacctcaaccgtaccttag 10947742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 11391815 - 11391745
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||||  ||||| | || | || ||||||||||| ||||||||||||||    
T  11391815 ccaaaacctgttaaactcaaaatcagaaattaaaatttatactactgaagtaaacctcacccttaccttag 11391745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14594100 - 14594030
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||||||||||||||| | || |||||| |||| ||||   ||||||||||||||||||||||    
T  14594100 cactccccaaatcagtttacagatacgaaataacttgctgtatgcactcagaacctatttctaacatcaaa 14594030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 12913593 - 12913390
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    ||||||||||||||||||||| || || |||||| | | | | |||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  12913593 cactccccaaatcagtttacaaatacataattaagtgt-tctatgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 12913496  T
Q  100 tttcatcataaaatccaaaatc-cccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||| ||||||||| || || |  ||||| |||| |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||| |||||||||    
T  12913495 ttttatcataaaaacccaattttcccaaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaatcccaccctt 12913396  T
Q  197 acctta 202  Q
    ||||||    
T  12913395 acctta 12913390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27908932 - 27908729
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    ||||||||||||||| |||||||| || |||||| | | | | |||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  27908932 cactccccaaatcagcttacagatacataattaagtgt-tctatgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 27908835  T
Q  100 tttcatcataaaatccaaaatc-cccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||| ||||||||| || || |  ||||| |||| |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||| |||||||||    
T  27908834 ttttatcataaaaacccaattttcccaaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaatcccaccctt 27908735  T
Q  197 acctta 202  Q
    ||||||    
T  27908734 acctta 27908729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 27955351 - 27955148
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    ||||||||||||||| |||||||| || |||||| | | | | |||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  27955351 cactccccaaatcagcttacagatacataattaagtgt-tctatgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 27955254  T
Q  100 tttcatcataaaatccaaaatc-cccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||| ||||||||| || || |  ||||| |||| |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||| |||||||||    
T  27955253 ttttatcataaaaacccaattttcccaaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaatcccaccctt 27955154  T
Q  197 acctta 202  Q
    ||||||    
T  27955153 acctta 27955148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 29304872 - 29304767
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||||||| |||||||   |||||||| ||||||||||||||||||||  ||||  |||||| || ||||| ||||  ||||||||    
T  29304872 atttcatcacaaaacccaaaattcccaattctcaccaaaactctgttaaactcaaaatcagaaattaacatctacactattgaagcaaacttcaccctta 29304773  T
Q  198 ccttag 203  Q
    ||||||    
T  29304772 ccttag 29304767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 29329101 - 29329187
Alignment:
Q  118 aatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||  |||||||| |||||||||||||||| |||  ||||  |||||| || ||||| ||||| ||||||||||||||    
T  29329101 aatccccaattttcaccaaaactctgttaaactcaaaattagaaattaacatctacactactgaagcaaacctcacccttaccttag 29329187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 41008711 - 41008618
Alignment:
Q  110 aaatccaaaatccccaattt-ctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||||||||||| || | |  ||| | |||||||| ||||| ||||||||||||||    
T  41008711 aaatctaaaattcccaattttctaccaaaatctgttaaactcaaaatcagaattcaga-actatactaatgaagcaaacctcacccttaccttag 41008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 19987398 - 19987329
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||    ||||| || ||||||||||| ||||||||||||||||    
T  19987398 aaacctgttaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcacccttaccttagtt 19987329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 29298317 - 29298212
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||||||| |||||||   |||||||| ||||||||||||||||||||  ||||  |||||| || ||||| ||||  || |||||    
T  29298317 atttcatcacaaaacccaaaattcccaattctcaccaaaactctgttaaactcaaaatcagaaattaacatctacactattgaagcaaacttcagcctta 29298218  T
Q  198 ccttag 203  Q
    ||||||    
T  29298217 ccttag 29298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43688178 - 43688243
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaaca 66  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||   |||| ||||||||||||    
T  43688178 cactccccaaatcagtttacagatgtaaattaacttgctgtatacattcagaaactatttctaaca 43688243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 20007208 - 20007295
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacag 224  Q
    ||||||||||||| |||||| ||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  20007208 aaacctgttaaac-caaaattagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacag 20007295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 36444966 - 36444874
Alignment:
Q  136 aaacctgttaaac-tcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||  ||||||||||| || ||   ||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  36444966 aaacctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcgcagcaa 36444874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 13361362 - 13361295
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||  |||||||||| |||||   |||||||  ||||||||||| ||||||||||||||    
T  13361362 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttag 13361295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 19297449 - 19297512
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||  || || |||| | || ||||||||||| ||||||||||||||    
T  19297449 ctgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttag 19297512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 19860467 - 19860566
Alignment:
Q  122 cccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgc 220  Q
    |||||||||||||| ||||||||| || ||||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| || ||||||    
T  19860467 cccaatttctaccataaacctgttcaaatcaaaatcagaattcaataactatactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgc 19860566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 20258214 - 20258147
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||| ||||||||||| || |   |||||| || ||||||||||| |||||||||||||    
T  20258214 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttacctta 20258147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 21044844 - 21044777
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||| ||||||||||| || |   |||||| || ||||||||||| |||||||||||||    
T  21044844 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttacctta 21044777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14415913 - 14415849
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaac 65  Q
    |||||||||||| ||||||||||||  ||||||||| || | ||||   ||||||||||||||||    
T  14415913 cactccccaaattagtttacagatgtgaattaacttgctatatgcattcagaacctatttctaac 14415849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 28759641 - 28759892
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  28759641 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcaaaaactacaat 28759740  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||    
T  28759741 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaaccccacccttacct 28759840  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| || |||||||||| |  ||||||||| |||||||||||    
T  28759841 taattcagaatgaaaattgcacagcaaaaaaggttcctctggttcttctctc 28759892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 14844540 - 14844290
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| || |||||||||| | | |||    
T  14844540 cactccccaaatcagtttacagatgcgaattaactttctgtatgcaattagaacctatttctaacatcaaattcatgcctacaacttcaaaacc-acaat 14844442  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  14844441 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaa-ctcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 14844343  T
Q  201 tagttcagaatgacaaatgcacagcaac-aggggttcctctagttcttctctc 252  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  14844342 tagttcagaatgaaaaatgcacagcaacaaggggttcctctagttcttctctc 14844290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 50142146 - 50141896
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| |||  ||    
T  50142146 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcacttagaacctatttctaacatcaaattcatgcttacaacttcaaaa-ctaccat 50142048  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  50142047 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 50141948  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| || |||||||||| | |||||||||| |||||||||||    
T  50141947 taattcagaatgaaaattgcacagcaaaaagggttcctctggttcttctctc 50141896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 29494328 - 29494530
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  29494328 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcagaaactacaat 29494427  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  29494428 ttcatcataaaacccaaaatccccaatttttaccaaaacctgctaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 29494527  T
Q  201 tag 203  Q
    |||    
T  29494528 tag 29494530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 50655385 - 50655145
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||| ||| |||||| | | |||    
T  50655385 cactccccaaatcagtttacagatgcaaattaactttctgtatacacttagaacctatttctaacatcaaattcatgcttacaacatcaaaacccacaat 50655286  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  50655285 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 50655186  T
Q  201 tagttcagaatgacaaatgcacagc-aacaggggttcctct 240  Q
    ||||||||||||| ||||||||||| || ||||||||||||    
T  50655185 tagttcagaatgaaaaatgcacagcaaaaaggggttcctct 50655145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 51246517 - 51246718
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| ||     
T  51246517 cactccccaaatcagtttacagatgcagattaactttctgtgtgcaactagaacctatttttaacatcaaattcatgcttacaacttc-aaaactacaaa 51246615  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||    
T  51246616 ttcatcataaaacccaaaatccccaatttttaccaaaacctattaaactcaaaatcagactttaaattctatactattgaagtaaacctcacccttacct 51246715  T
Q  201 tag 203  Q
    |||    
T  51246716 tag 51246718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 47121919 - 47122119
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| || |||||||  ||    
T  47121919 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacatc-aaaactaccat 47122017  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| | |||| |||||| || ||||||||| |||||||||||||    
T  47122018 ttcatcataaaacccaaaatccccaatttttaccaaaacctgtcaaactcaaaatcagaatctaaaatctacactattgaagtaaatcccacccttacct 47122117  T
Q  201 ta 202  Q
    ||    
T  47122118 ta 47122119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 47129287 - 47129487
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| || |||||||  ||    
T  47129287 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacatc-aaaactaccat 47129385  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| | |||| |||||| || ||||||||| |||||||||||||    
T  47129386 ttcatcataaaacccaaaatccccaatttttaccaaaacctgtcaaactcaaaatcagaatctaaaatctacactattgaagtaaatcccacccttacct 47129485  T
Q  201 ta 202  Q
    ||    
T  47129486 ta 47129487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 43723355 - 43723216
Alignment:
Q  113 tccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||||||    
T  43723355 tccaaaatcatcaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatg 43723256  T
Q  213 acaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    | || |||||||||| | |||||||||| |||||||||||    
T  43723255 aaaattgcacagcaaaaagggttcctctggttcttctctc 43723216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 2498290 - 2498169
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagc-aacag 230  Q
    ||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||| || ||    
T  2498290 accaaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatgaaaaatgcacagcaaaaag 2498191  T
Q  231 gggttcctctagttcttctctc 252  Q
    |||||||||| |||||||||||    
T  2498190 gggttcctctggttcttctctc 2498169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16413660 - 16413434
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||| ||||||||||| |||||||| ||||||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  16413660 cactccccaaattagtttacagatacaaattaattttctgtatgcacttagaacctatttctaacaccaaattcactcttacaacttcaaattc-atcat 16413562  T
Q  101 ttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||||||| || || | ||||| |||| || ||||| ||||||||| ||||||||||  | ||   ||| |||| ||||||||||| |||||||||    
T  16413561 ttcatcataaaaacccaatttcccaaattctcactaaaactctgttaaacacaaaatcagaaatcaataactatattactgaagtaaacctcacccttac 16413462  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||| |||||||||||||    
T  16413461 cttagttcagaatga-aaatgcacagcaa 16413434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 38743686 - 38743844
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  ||||||||||||| | |||||||||||  ||   |||| | ||||  || ||    
T  38743686 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttccagcatcaaattcacactcccaactcccaaaatcatcat 38743785  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    | || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  38743786 tccaacataaaacccaaaatccccaatttccaccaaaacctgttaaactcaaaatcaga 38743844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 30099729 - 30099527
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||  ||| |||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  30099729 cactccccaaatcagtttacagatacaaattaactttctgtatgcacttaggacctatttctaacaccaaattcacacttacaacttcaaattc-atcat 30099631  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| || || | ||| | |||| ||| ||| ||||||||| |||||||||| || ||   |||||||  ||||||||||| ||||||||||    
T  30099630 ttcatcataaaaacccaatttccccaattctcccataactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacc 30099531  T
Q  200 ttag 203  Q
    ||||    
T  30099530 ttag 30099527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 10382713 - 10382915
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaa-ttaa-ctttctgtgtgcaactagaa-cctatttctaacatcaaattcatgcttataacttcaaaaactat 97  Q
    |||||||||||||||||||||||| |||| |||| | |||| ||  |||| |||| || |||| |||||||||||||| ||||| |||||||||||        
T  10382713 cactccccaaatcagtttacagatacaaaattaagcgttctatg--caaccagaaaccaatttttaacatcaaattcaggcttacaacttcaaaaatctc 10382810  T
Q  98 aatttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    | ||||| ||||| | ||||||||||||| ||  || ||||||||||||||||||||||||| | |||| |||||| || |||||||||||| |||||||    
T  10382811 attttcaacataacacccaaaatccccaaatttcactaaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaaccctaccctta 10382910  T
Q  198 cctta 202  Q
    |||||    
T  10382911 cctta 10382915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 21353092 - 21353183
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  21353092 aaaacctgttaaactcaaattcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 21353183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 3109416 - 3109490
Alignment:
Q  178 tgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  3109416 tgaagtaaaccccacccttaccttagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 3109490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 9771297 - 9771094
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaa-ttaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || | |||| | | | | |||||| |||| ||| ||||||||||||| ||||||||| |||||||||| |  | |    
T  9771297 cactccccaaatcagtttacagatacatacttaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgcttacaacttcaaaatc-ctca 9771200  T
Q  100 tttcatcataaaa-tccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| |||||||||  ||||||||||||||| || ||||||||||||||||||||||||||||  | ||   | ||| || ||||||||||| ||||||||    
T  9771199 ttttatcataaaaccccaaaatccccaattcctcaccaaaacctgttaaactcaaaatcagaaatcaataacaacactattgaagtaaacctcaccctta 9771100  T
Q  198 ccttag 203  Q
    ||||||    
T  9771099 ccttag 9771094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 21150864 - 21150662
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| || |||||||||| ||||| ||| |||||||||| |  | |    
T  21150864 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattataacatcaaaatcatgtttacaacttcaaaatcc-tca 21150767  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||  ||||||| || |||||||||||| |||||||||||||||||||||   ||||| || ||||||||||| |||||||||    
T  21150766 ttctatcataaaaccccaaaatcccaattcctcaccaaaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttac 21150667  T
Q  199 cttag 203  Q
    |||||    
T  21150666 cttag 21150662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 45612428 - 45612630
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  45612428 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 45612525  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | ||||||||||||||  |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  45612526 ttctatcataaaaccccaaattcccaattcctcatcaaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 45612625  T
Q  199 cttag 203  Q
    |||||    
T  45612626 cttag 45612630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 15081230 - 15081370
Alignment:
Q  62 taacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagact 161  Q
    |||||||||||||| ||||| |||||||||||    | ||||| ||||||| ||||||||||||| ||  || |||||||||||||||||||||||||      
T  15081230 taacatcaaattcaggcttacaacttcaaaaatcccattttcaacataaaacccaaaatccccaaatttcactaaaacctgttaaactcaaaatcagaaa 15081329  T
Q  162 ttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    | |    |||||||| ||||||||||| |||||||||||||    
T  15081330 tcagtaactacattattgaagtaaacctcacccttacctta 15081370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 54832448 - 54832361
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||| |||||||||| |||||| |||||| || ||||||||||| ||||||||||||| |||| ||||| |||||||||||||    
T  54832448 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaattcaaaatgaaaaatgcacagcaa 54832361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 10768530 - 10768732
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  10768530 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 10768627  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | ||||||||||||||  |||||||||| |||||   |||||||  ||||||||||  ||||||||     
T  10768628 ttctatcataaaaccccaaattcccaattcctcagcaaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacatcacccttat 10768727  T
Q  199 cttag 203  Q
    |||||    
T  10768728 cttag 10768732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 9690846 - 9690624
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||   ||||||||| |||| | || | |||||||||| |||||||||||   |   ||   ||| ||||  | || ||    
T  9690846 cactccccaaatcagtttacagatatgaattaacttgctgtatacacccagaacctattcctaacatcaaaacaacaatttctactccaaattc-atcat 9690748  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||| ||| |||| |||||||||||||||   |||| ||| ||||||||||||||||||||  ||||  |||||| || ||||||||| | ||| ||||||    
T  9690747 ttcttcacaaaacccaaaatccccaattctcaccagaactctgttaaactcaaaatcagaaattaacatctacactactgaagtaaatctcactcttacc 9690648  T
Q  200 ttagttcagaatgacaaatgcaca 223  Q
    ||| |||||||||| |||||||||    
T  9690647 ttaattcagaatgaaaaatgcaca 9690624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 48773995 - 48773793
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||  ||||||||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||  || | |||| ||||| | |  ||    
T  48773995 cactccccaaattggtttacagatgtaaattagctttctgtatgcacttagaacctatttctaacatcaaattcacactcacaactccaaaatc-aacat 48773897  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| || |||  | |||||   || ||||| |||||||| ||||| |||||  |||    ||||| || ||||||||||| ||||||||||    
T  48773896 ttcatcataaaaccccaaaatctcaattctcactaaaactctgttaaattcaaattcagaaattagtaactacactattgaagtaaacctcacccttacc 48773797  T
Q  200 ttag 203  Q
    ||||    
T  48773796 ttag 48773793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 10411418 - 10411539
Alignment:
Q  52 aacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactca 151  Q
    |||| |||| |||||||||||||| ||||| |||||||||||    | ||||| ||||| | ||||||||||||| ||  || |||||||||||||||||    
T  10411418 aaccaatttttaacatcaaattcaggcttacaacttcaaaaatcccattttcaacataacacccaaaatccccaaatttcactaaaacctgttaaactca 10411517  T
Q  152 aaatcagactttaaattctaca 173  Q
    |||||||| | |||| ||||||    
T  10411518 aaatcagaatctaaaatctaca 10411539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 29551829 - 29551928
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||| ||||||||||||||||||| || ||||| ||| |  |||| | || ||||||||| | ||||||||||||| |||||||||| |||||||||    
T  29551829 caatttccaccaaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcaca 29551928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 54090981 - 54090911
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||||  ||||| |||| | || ||||||||||| ||||||||||||||    
T  54090981 ccaaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttaccttag 54090911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 12960624 - 12960545
Alignment:
Q  127 tttctaccaaaacctgttaaactc-aaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||||||||||||||| ||||||||| || | | |||| | |||||||| ||||| ||||||||||||||||    
T  12960624 tttctaccaaaacctgttaaactcaaaaatcagaattcagaatctatactaatgaagcaaacctcacccttaccttagtt 12960545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 17497146 - 17497237
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||| ||||||||| | || ||   ||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  17497146 aaacctgttaaaatcaaaatcaaaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcacagcaa 17497237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 14293661 - 14293739
Alignment:
Q  125 aatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||||||||||||| || | | |||| |  | || |||||||| ||||||||||||||    
T  14293661 aatttctaccaaaacctgttaaactcaaaatcagaattcagaatctatacaattgcagtaaacctcacccttaccttag 14293739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 14299288 - 14299366
Alignment:
Q  125 aatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||||||||||||| || | | |||| |  | || |||||||| ||||||||||||||    
T  14299288 aatttctaccaaaacctgttaaactcaaaatcagaattcagaatctatacaattgcagtaaacctcacccttaccttag 14299366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 51854341 - 51854279
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||| |||||||||| |||||| |||||| || ||||||||||| |||||||||||||    
T  51854341 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 51854279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 53570470 - 53570408
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||| |||||||||| |||||| |||||| || ||||||||||| |||||||||||||    
T  53570470 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 53570408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 3552991 - 3552831
Alignment:
Q  43 tgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttct-accaaaac-c 140  Q
    |||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |||| ||||||||| || || | ||||| |||| |||||||| |    
T  3552991 tgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atcattttatcataaaaacccaatttcccaaattctcaccaaaactc 3552893  T
Q  141 tgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||| |||||||||| || ||   |||||||  |||| |||| |||||||||||||||    
T  3552892 tgttaaacacaaaatcagaattcaataactacattcttgaaataaatcccacccttacctta 3552831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 11304985 - 11304900
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaat-tctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgc 220  Q
    |||||||||||| ||||||||||  |||||   |||||| || ||||||||||| ||||||||||||| ||||||| |||||||||    
T  11304985 aaacctgttaaaatcaaaatcaggatttaaccatctacactattgaagtaaacctcacccttaccttaattcagaaagacaaatgc 11304900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 12355267 - 12355178
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    ||||| ||||||| | || ||||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  12355267 aaaattcccaattccaacaaaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttaccttagtt 12355178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 12536966 - 12536866
Alignment:
Q  116 aaaatccccaatttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    ||||||||||||||||||||||| || ||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| |||    
T  12536966 aaaatccccaatttctaccaaaagcttgttaaac-caaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggac 12536868  T
Q  215 aa 216  Q
    ||    
T  12536867 aa 12536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 227
Target Start/End: Original strand, 13692856 - 13692980
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||  || ||||||||||||  ||||||||| |||||||| |||||||||| || |    | | | || ||||| ||||| |||||||||||    
T  13692856 ttcatcataaa--cctaaatccccaattcttaccaaaacttgttaaacccaaaatcagaattcattaaccatactattgaagcaaacctcacccttacct 13692953  T
Q  201 tagttcagaatgacaaatgcacagcaa 227  Q
    || ||||||| || |||||||||||||    
T  13692954 taattcagaaggaaaaatgcacagcaa 13692980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 15934181 - 15934075
Alignment:
Q  117 aaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||   |||    
T  15934181 aaatccccaatttctaccataaacttgttaaa-tcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaaca 15934083  T
Q  216 aatgcaca 223  Q
    ||||||||    
T  15934082 aatgcaca 15934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 15954186 - 15954080
Alignment:
Q  117 aaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||||||||||||||||| |||| ||||||| ||||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||   |||    
T  15954186 aaatccccaatttctaccataaacttgttaaa-tcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaaca 15954088  T
Q  216 aatgcaca 223  Q
    ||||||||    
T  15954087 aatgcaca 15954080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 30596104 - 30596037
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||  ||||   ||||| || ||||||||||| |||||||||||||    
T  30596104 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttacctta 30596037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 46070354 - 46070263
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||| || ||||| ||| |  |||| | || ||||||||| | ||| ||||||||| |||||||||| |||||||||||||    
T  46070354 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcactcttaccttaattcagaatgaaaaatgcacagcaa 46070263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 891849 - 891704
Alignment:
Q  59 ttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatc 156  Q
    |||||||||||||  |||||||| |||||||||| |  | |||  ||||||||| || |||| | ||||| || |||||||| ||||||||| |||||||    
T  891849 ttctaacatcaaaaacatgcttacaacttcaaaatcc-tcattctatcataaaaccccaaattctcaattcctcaccaaaactctgttaaacacaaaatc 891751  T
Q  157 agactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||| || ||   |||||||  ||||||||||| ||||||||||||||    
T  891750 agaattcaataactacattcttgaagtaaacctcacccttaccttag 891704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 12256516 - 12256553
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12256516 cccaatttctaccaaaacctgttaaattcaaaatcaga 12256553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 18127785 - 18127716
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  18127785 aaacctgttaaaatcaaaatcagaattaatcatctacactattgaagtaaacctcacccttaccttagtt 18127716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 18135555 - 18135486
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  18135555 aaacctgttaaaatcaaaatcagaattaatcatctacactattgaagtaaacctcacccttaccttagtt 18135486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 18718377 - 18718340
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    |||||||||||||||||||||||||| |||||||||||    
T  18718377 cccaatttctaccaaaacctgttaaattcaaaatcaga 18718340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 49164036 - 49164141
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatt-tctaccaaaacctgttaaac-tcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||||||||| |||||||| ||||||||||| ||  | |||||||||||||| |||||||||||  ||||  |||| | || ||||| ||||| |||||||    
T  49164036 atttcatcacaaaatccataatccccaattctcaccaaaaacctgttaaacatcaaaatcagagattaacatctatactactgaagcaaacctcaccctt 49164135  T
Q  197 acctta 202  Q
    ||||||    
T  49164136 acctta 49164141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 16823037 - 16822942
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| |  ||| | || | || ||||| ||||| |||| |||||||| ||||||    
T  16823037 ccaaaatccccaatttctaccataaacctgttaaa-tcaaaatcagaataaaaaatgtatactattgaagcaaacctcaccattaccttaattcaga 16822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 20376487 - 20376395
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||| || ||||| ||| |   ||| | || ||||||||| | ||||||||| ||| |||||||||| |||||||||||||    
T  20376487 aaaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttacattaattcagaatgaaaaatgcacagcaa 20376395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 11964154 - 11964084
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||| |||||||| ||||||||||| || | | ||||||  | ||||||||||| ||||||||||||||||    
T  11964154 aaaagctgttaaaatcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttaccttagtt 11964084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 14570768 - 14570853
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcac 222  Q
    ||||||||||||| |||||||||| || ||  ||||   || ||||| ||||| ||||||||||||| ||||||| |||||||||||    
T  14570768 aaacctgttaaac-caaaatcagaattcaatatctattctactgaagcaaacctcacccttaccttaattcagaaggacaaatgcac 14570853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 49163939 - 49164005
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacat 67  Q
    |||||||||||| ||||||||||||  ||||||||| |||| ||||   | ||||||||||||||||    
T  49163939 cactccccaaattagtttacagatgtgaattaacttgctgtatgcactcataacctatttctaacat 49164005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 6926946 - 6926897
Alignment:
Q  43 tgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaa 92  Q
    |||||| |||| ||| ||||||||||||| ||||||||| ||||||||||    
T  6926946 tgcaaccagaaactaattctaacatcaaaatcatgcttacaacttcaaaa 6926897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 15519435 - 15519504
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||    ||||| || ||||| ||||| ||||||||||||||||    
T  15519435 aaacctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttaccttagtt 15519504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 8373164 - 8373096
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||||||| |||||||||||  ||||  | |||| || ||||| ||||| |||||||||||    
T  8373164 accaaaacctgttaaattcaaaatcagaaattaacatttacactactgaagcaaacctcacccttacct 8373096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 11644022 - 11643930
Alignment:
Q  136 aaacctgttaaac-tcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||  ||||||||||| || ||   ||| |||| ||||| ||||| ||||||||||||| ||||||| || |||||| ||||||    
T  11644022 aaacctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagaaaaatgcgcagcaa 11643930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16330993 - 16330925
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||  |||||||||||  | ||||||| |||| ||||   ||||||||||||||||||||    
T  16330993 cactccccaaattggtttacagatgagagttaacttactgtatgcactcagaacctatttctaacatca 16330925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 32387262 - 32387190
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttca 207  Q
    |||||||||||||||| || ||||| ||| |  |||| | || ||||||||| ||||||||||||||| ||||    
T  32387262 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 32387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 48428642 - 48428893
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  48428642 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttacaacttcaaaaactacaat 48428741  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | || ||||||||||| |||||||||||    
T  48428742 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaattcagactttaaattctatactattgaagtaaacctcacccttacct 48428841  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  48428842 taattcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 48428893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 39189003 - 39188801
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||| ||||||||| |||    
T  39189003 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaactccaaaaactacaat 39188904  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| |||||||||||    
T  39188903 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaacctcacccttacct 39188804  T
Q  201 tag 203  Q
    |||    
T  39188803 tag 39188801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 37676196 - 37676398
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  37676196 cactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaacctatttctaacaccaaattcatgcttacaacttcaaaaactacaat 37676295  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||    
T  37676296 ttcaacataaaacccaaaatccccaatttttaccgaaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacct 37676395  T
Q  201 tag 203  Q
    |||    
T  37676396 tag 37676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 37682867 - 37683069
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  37682867 cactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaacctatttctaacaccaaattcatgcttacaacttcaaaaactacaat 37682966  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||    
T  37682967 ttcaacataaaacccaaaatccccaatttttaccgaaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacct 37683066  T
Q  201 tag 203  Q
    |||    
T  37683067 tag 37683069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 38907379 - 38907154
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||| |  ||   |||| ||||| | | |||    
T  38907379 cactccccaaatcagtttacagatgcaaattaactttctgtatgtacttagaacctatttctaacatcaaatttacactcccaactccaaaatccacaat 38907280  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||    
T  38907279 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaatctcacccttacct 38907180  T
Q  201 tagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||| |||||||||||||    
T  38907179 tagttcagaatga-aaatgcacagcaa 38907154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 19045627 - 19045383
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||   ||||| ||||||||| || |  |||||||||||||||||||||||||||  || | |||| ||||| | |||||    
T  19045627 cactccccaaatcagtttacagacataaattcactttctgtatgtacttagaacctatttctaacatcaaattcacactcacaactccaaaatccataat 19045528  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||||||||||||| ||||||  |||||||||||||||||||||||| | | | |||| |||||| || ||||||||||| |||||||||||    
T  19045527 t-caacataaaatccaaaatcctcaattttcaccaaaacctgttaaactcaaaataaaaatctaaaatctacactattgaagtaaacctcacccttacct 19045429  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttct 246  Q
    || |||||||||| ||||||||||||| | ||||| |||| |||||    
T  19045428 taattcagaatgaaaaatgcacagcaaaaagggttgctctggttct 19045383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20076270 - 20076044
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||  ||| || |  |||||||||||||||||||||||||||  |||| |||||||||  | || ||    
T  20076270 cactccccaaatcagtttacagatataaattaacttcgtgtatgtacttagaacctatttctaacatcaaattcacacttacaacttcaaattc-atcat 20076172  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||  | ||  |||| | || ||||||||||| |||||||||||    
T  20076171 tccatcataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttacct 20076072  T
Q  201 tagttcag-aatgacaaatgcacagcaa 227  Q
    |||||||| ||||| |||||||||||||    
T  20076071 tagttcagaaatgaaaaatgcacagcaa 20076044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 42626988 - 42627190
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  ||||||||||||||| |||||||||||  ||   |||| | ||||  || ||    
T  42626988 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttctagcatcaaattcacactcccaactcccaaaatcatcat 42627087  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || |||| || ||||||||||||||||  |||||||||||||||||||||||||| |  | ||   ||||| || ||||||||||| |||||||||||    
T  42627088 tccaacatagaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcaaaaatcaataactacactattgaagtaaacctcacccttacct 42627187  T
Q  201 tag 203  Q
    |||    
T  42627188 tag 42627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 20276578 - 20276375
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||  | ||||||| |||||||| ||||||||  |||| |||||||||  | || ||    
T  20276578 cactccccaaatcagtttacagatacaaattaactttctgtatgcacttggaacctaattctaacaccaaattcacacttacaacttcaaattc-atcat 20276480  T
Q  101 ttcatcat-aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
     ||||||| |||| ||||  |||||||||   |||||||| ||||||||| |||||||||| | |||| |||||| || ||||||||||| |||||||||    
T  20276479 ctcatcataaaaacccaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatctaaaatctacactattgaagtaaacctcacccttac 20276380  T
Q  199 cttag 203  Q
    |||||    
T  20276379 cttag 20276375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 18026078 - 18025914
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||||||| |||||||||| | || |    
T  18026078 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgcttacaacttcaaaatc-atca 18025981  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaa 165  Q
    ||| ||||||||| || |||  ||||||| || |||||||||||| |||||||||||||||||||||    
T  18025980 ttttatcataaaaccccaaaatcccaattcctcaccaaaacctgtcaaactcaaaatcagactttaa 18025914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 36211242 - 36211152
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||||||| | |||||||||||||    
T  36211242 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaat-aaaaatgcacagcaa 36211152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 20571664 - 20571733
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||    
T  20571664 ccaaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 20571733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 29150431 - 29150362
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||    
T  29150431 ccaaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 29150362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18418916 - 18419138
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||  |||| | | ||||||||| |||  |||||||| |||||||||| |  | |    
T  18418916 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaatcagaaaccaattctaacattaaaaacatgcttacaacttcaaaatcc-tca 18419013  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || ||||||||||||||||  |||||||||| || ||   |||||||  ||||||||||| |||||||||    
T  18419014 ttctatcataaaaccccaaattcccaattcctcaccaaaacctgttaaatacaaaatcagaattcaataactacattcttgaagtaaacctcacccttac 18419113  T
Q  199 cttagttcagaatgacaaatgcaca 223  Q
    |||| |||||||||| |||||||||    
T  18419114 cttaattcagaatgaaaaatgcaca 18419138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 20396113 - 20395998
Alignment:
Q  132 accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacag 230  Q
    |||||||| ||||||||| |||||||| | |||||   ||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| |     
T  20396113 accaaaactctgttaaacacaaaatcaaaatttaatagctacaatattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaa 20396014  T
Q  231 gggttcctctagttct 246  Q
    |||||||||| |||||    
T  20396013 gggttcctctggttct 20395998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17150107 - 17150308
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    ||||||||||||||||||||| || || |||||| | | | | |||||| |||| ||| ||||||||||||| |||||||||||||||||||| |  | |    
T  17150107 cactccccaaatcagtttacatatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgcttataacttcaaaatc-ctca 17150204  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcaga--ctttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||| ||||||||| || |||  | ||||| || ||||||||||||||||||||||||||||  |  |||   ||||| || ||||||||||| |||||||    
T  17150205 ttttatcataaaaccccaaaatctcaattcctcaccaaaacctgttaaactcaaaatcagaatcagtaa---ctacactattgaagtaaacctcaccctt 17150301  T
Q  197 accttag 203  Q
    |||||||    
T  17150302 accttag 17150308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 20293599 - 20293668
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||||||| |||||| |||||| || ||||||||||| |||||||||||||    
T  20293599 ccaaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 20293668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 20300230 - 20300299
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||||||| |||||| |||||| || ||||||||||| |||||||||||||    
T  20300230 ccaaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 20300299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 36917906 - 36918120
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||| ||||||||||||  | ||||||| |||| ||||   |||||||||||||||||||| | |||   |   |||| ||| | | || ||    
T  36917906 cactccccaaattagtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcagaatcacaatctcaactccaatatc-atcat 36918004  T
Q  101 ttcatcat--aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    |||||||   |||| ||||||||||||||||  ||||| || ||||||||||||||||||||  ||||  |||| | || ||||||||||| ||||||||    
T  36918005 ttcatcaccaaaaacccaaaatccccaattttcaccaacactctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcaccctta 36918104  T
Q  198 ccttagttcagaatga 213  Q
    ||||| ||||||||||    
T  36918105 ccttaattcagaatga 36918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 41052532 - 41052734
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| || |||||||||| ||||| ||| |||||||||| |  | |    
T  41052532 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattttaacatcaaaatcatgtttacaacttcaaaatcc-tca 41052629  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||  ||||||| || |||||||||||| |||||||||||||||||||||   ||||| || |||||||||   |||||||||    
T  41052630 ttctatcataaaaccccaaaatcccaattcctcaccaaaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaatttcacccttac 41052729  T
Q  199 cttag 203  Q
    |||||    
T  41052730 cttag 41052734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 31926553 - 31926445
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||| ||||||  |||||||||||||||||||||| |||||||||||| ||||||||||| || ||  |||||| || ||||| ||||| ||||||||||    
T  31926553 ttcaacataaaccccaaaatccccaatttctaccataaacctgttaaa-tcaaaatcagaattaaacatctacactactgaagcaaacctcacccttacc 31926455  T
Q  200 ttagttcaga 209  Q
    ||| ||||||    
T  31926454 ttaattcaga 31926445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 6741442 - 6741509
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  6741442 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttag 6741509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 21921706 - 21921809
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||| || |||||||||||||||| || ||||| ||| |   ||| |||| ||||||||| | ||||||||||||| |||||||||| |||||||||    
T  21921706 caatttccactaaaacctgttaaactccaattcagaatttcataactatattactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcaca 21921805  T
Q  224 gcaa 227  Q
    ||||    
T  21921806 gcaa 21921809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 30490674 - 30490580
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcag 208  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||| || ||  |||||| || ||||||||||| ||||||||||||| |||||    
T  30490674 ccaaaatccccaaattctaccataaacctgttaaac-caaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcag 30490580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 19336715 - 19336824
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||       
T  19336715 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcagatga 19336813  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  19336814 acaaatgcaca 19336824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 28555828 - 28555626
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaa-ttaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||| ||||||||| |||| |||| | | | | |||||| |||| | | |||||||||||||  |||||||| |||||||||| |  | |    
T  28555828 cactccccaaatcaatttacagatacaaaattaagtgt-tctatgcaaccagaaaccaattctaacatcaaaaacatgcttacaacttcaaaatcc-tca 28555731  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  || |||||| || |||| ||||||| || ||||||||||||||||||||||||||||  | |    ||||| || ||||||||||| |||||||||    
T  28555730 ttctattataaaaccccaaattcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttac 28555631  T
Q  199 cttag 203  Q
    |||||    
T  28555630 cttag 28555626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 31534492 - 31534425
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  31534492 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 31534425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 31563209 - 31563142
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  31563209 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 31563142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9292491 - 9292566
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcat 76  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |    |||||||||||||||||||||| ||||    
T  9292491 cactccccaaatcagtttacagatgtaaattaacttactgtatacgctcagaacctatttctaacatcaaaatcat 9292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 23713144 - 23713253
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| | || ||| |||| | || ||||| ||||| ||||||||||||| |||| ||||    
T  23713144 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcataattaaaaatctatactactgaagcaaacctcacccttaccttaattca-aatg 23713241  T
Q  213 -acaaatgcaca 223  Q
     |||||||||||    
T  23713242 aacaaatgcaca 23713253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 29601495 - 29601392
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||| || |||||||||||||||| || ||||| ||| |   ||| | || ||||||||| | ||||||||||||| |||||||||| |||||||||    
T  29601495 caatttccactaaaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcaca 29601396  T
Q  224 gcaa 227  Q
    ||||    
T  29601395 gcaa 29601392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 39095113 - 39095314
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaa-ttaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || | |||| | | | | |||||| |||| | | |||||||||||||  |||||||| |||||||||| |  | |    
T  39095113 cactccccaaatcagtttacagatacatacttaagtgt-tctatgcaaccagaaaccaattctaacatcaaaaacatgcttacaacttcaaaatcc-tca 39095210  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || || | | ||||| || ||||||| ||||||||  |||||||||| |||||   |||||||  |||||||||||||||||||||    
T  39095211 ttctatcataaaaccccaatttctcaattcctcaccaaaatctgttaaatacaaaatcagaatttaataactacattcttgaagtaaaccccacccttac 39095310  T
Q  199 ctta 202  Q
    ||||    
T  39095311 ctta 39095314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 24425003 - 24425051
Alignment:
Q  178 tgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  24425003 tgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 24425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 21699047 - 21699142
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||    
T  21699047 ccaaaattcccaatttctaccataaacctgttaaac-caaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 21699142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 24237661 - 24237557
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||||||||||||| |   |||||||| ||||||||||||||||||||  ||||  |||| | || ||||| ||||| ||||||||    
T  24237661 atttcatcacaaaacccaaaatccccaactctcaccaaaactctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcaccctta 24237562  T
Q  198 cctta 202  Q
    |||||    
T  24237561 cctta 24237557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 19777882 - 19777803
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||| ||||||||||||||||||||||||||||||| || | | || | |  | ||||||||||| ||||||||||||||    
T  19777882 caatctctaccaaaacctgttaaactcaaaatcagaattcagaatcaatacaattgaagtaaacctcacccttaccttag 19777803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 23065912 - 23065869
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  23065912 aaaattcccaatttctaccaaaatctgttaaactcaaaatcaga 23065869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 29553675 - 29553640
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    ||||||||||||||||||||||||||||||||||||    
T  29553675 caatttctaccaaaacctgttaaactcaaaatcaga 29553640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 36615816 - 36615942
Alignment:
Q  98 aatttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    |||||||||||||   ||||||| ||||||| |||||| ||| |||||||| |||||||||||  ||| | |||| | || ||||| ||||| |||||||    
T  36615816 aatttcatcataac--ccaaaattcccaatt-ctaccataactctgttaaa-tcaaaatcagaacttagaatctatactactgaagcaaacctcaccctt 36615911  T
Q  197 accttagttcagaatgacaaatgcacagcaa 227  Q
    |||||| |||||||  |||||||||||||||    
T  36615912 accttaattcagaagcacaaatgcacagcaa 36615942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 227
Target Start/End: Original strand, 43089267 - 43089393
Alignment:
Q  98 aatttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    |||||||||||||   ||||||| ||||||| |||||| ||| |||||||| |||||||||||  ||| | |||| | || ||||| ||||| |||||||    
T  43089267 aatttcatcataac--ccaaaattcccaatt-ctaccataactctgttaaa-tcaaaatcagaacttagaatctatactactgaagcaaacctcaccctt 43089362  T
Q  197 accttagttcagaatgacaaatgcacagcaa 227  Q
    |||||| |||||||  |||||||||||||||    
T  43089363 accttaattcagaagcacaaatgcacagcaa 43089393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 23634461 - 23634570
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||| | ||   ||| ||||| ||||||||||||| || |||       
T  23634461 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctatactaccaaagcaaacctcacccttaccttaatttagatga 23634559  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  23634560 acaaatgcaca 23634570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 16882758 - 16882689
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||    ||||| || ||||||||||| ||||||||||||||||    
T  16882758 aaacctgttaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcacccttaccttagtt 16882689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 21963935 - 21964003
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcag 208  Q
    ||||||||||||||||||||  || || |||| | || ||||||||||| ||||||||||||| |||||    
T  21963935 ctgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttaattcag 21964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 19853849 - 19853916
Alignment:
Q  2 actccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    |||||||||||  |||||||||||  || |||||| |||||||||   ||||||||||||||||||||    
T  19853849 actccccaaattggtttacagatgtgaaataacttactgtgtgcactcagaacctatttctaacatca 19853916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 21736086 - 21736152
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctt 201  Q
    ||||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||    
T  21736086 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttacctt 21736152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 12203579 - 12203615
Alignment:
Q  190 cacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12203579 cacccttaccttagttcagaatga-aaatgcacagcaa 12203615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 19853983 - 19854052
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||  || ||||||||||| ||||||||||||||||    
T  19853983 aaacctgttaaaatcaaaatcagaattaaccatctacgctattgaagtaaacctcacccttaccttagtt 19854052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 19860122 - 19860187
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  19860122 ctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaacctcacccttaccttagtt 19860187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 21665126 - 21665195
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||| | ||||||||||||||||    
T  21665126 aaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaatctcacccttaccttagtt 21665195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24080380 - 24080448
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||  |||||||||||  ||||||||| |||| ||||   ||||| ||||||||||||||    
T  24080380 cactccccaaattggtttacagatgtgaattaacttgctgtatgcactcagaacttatttctaacatca 24080448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 24080514 - 24080581
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||  ||||  |||| | || ||||| ||||| ||||||||||||||    
T  24080514 aaaacctgttaaactcaaaatcaga-attaacatctatactactgaagcaaacctcacccttaccttag 24080581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 15331478 - 15331228
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||| ||| |||    
T  15331478 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacttcaaaa-ctacaat 15331380  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  15331379 ttcatcataaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 15331280  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  15331279 taattcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 15331228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 17310455 - 17310705
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||| || |||||||||| ||| |||    
T  17310455 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcctacaacttcaaaa-ctacaat 17310553  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  17310554 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 17310653  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  17310654 taattcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 17310705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25559281 - 25559080
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||| |||    
T  25559281 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaa-ttcatgtgtacaacttcaaaaactacaat 25559183  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25559182 ttcatcataaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 25559083  T
Q  201 tag 203  Q
    |||    
T  25559082 tag 25559080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25315004 - 25314803
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||||||   | | |||| ||||| | | |||    
T  25315004 cactccccaaatcagtttacagatgcaaattaactttctgtatgtacttagaacctatttctaacatcaaattcacattcacaactccaaaatccacaat 25314905  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  | ||||| |||||||||||||||||||| |||||| |||||| || || | |||||| |||||||||||    
T  25314904 ttcaacataaaacccaaaatccccaattttcatcaaaa-ctgttaaactcaaaatcagaatttaaagtctacactattgcaataaacctcacccttacct 25314806  T
Q  201 tag 203  Q
    |||    
T  25314805 tag 25314803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 26202498 - 26202297
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||||||||||   | | |||| ||||| | | |||    
T  26202498 cactccccaaatcagtttacagatgcaaattaactttctgtatgtacttagaacctatttctaacatcaaattcacattcacaactccaaaatccacaat 26202399  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  | ||||| |||||||||||||||||||| |||||| |||||| || || | |||||| |||||||||||    
T  26202398 ttcaacataaaacccaaaatccccaattttcatcaaaa-ctgttaaactcaaaatcagaatttaaagtctacactattgcaataaacctcacccttacct 26202300  T
Q  201 tag 203  Q
    |||    
T  26202299 tag 26202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 24363486 - 24363579
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  24363486 ccaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 24363579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 24370077 - 24370170
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  24370077 ccaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 24370170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 10469965 - 10469870
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||||||||||||  ||||   ||||| || ||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  10469965 accaaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaa 10469870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 13127513 - 13127418
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||||||||||||  ||||   ||||| || ||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  13127513 accaaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaa 13127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19096147 - 19095945
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| | | ||||||||||||| ||||||||| || ||||||| |  | |    
T  19096147 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaaccaattctaacatcaaaatcatgcttacaagttcaaaatcc-tca 19096050  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| || |||| |||||||   |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||||| |||||||||    
T  19096049 ttttatcataaaaccccaaattcccaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttac 19095950  T
Q  199 cttag 203  Q
    |||||    
T  19095949 cttag 19095945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 18315204 - 18315109
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||| | || ||||| ||||| ||||||||||||| ||||||    
T  18315204 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcaga 18315109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 33875876 - 33875943
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  33875876 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttag 33875943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 93876 - 93675
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||| ||  | ||||||| |||| ||||   |||||||||||||||||||| | |||   ||  |||| ||||| | || ||    
T  93876 cactccccaaatcagtttacaggtgtgagttaacttactgtatgcactcagaacctatttctaacatcagaatcacaatttcaactccaaaatc-atcat 93778  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| || |||  |||||||    ||||||| |||||||||||||| |||||  ||||| |||| | || ||||||||||| ||||||||||    
T  93777 ttcatcataaaaccccaaaatcccaattcactccaaaactctgttaaactcaaattcaga-attaaaatctatactactgaagtaaacctcacccttacc 93679  T
Q  200 ttag 203  Q
    ||||    
T  93678 ttag 93675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 27768279 - 27768349
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||||  ||||| |||| | || ||||||||||| ||||||||||||||    
T  27768279 ccaaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttaccttag 27768349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 4107420 - 4107579
Alignment:
Q  45 caactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatcc-aaaatccccaatttct-accaaaacctg 142  Q
    |||| |||||||| ||||||||||||| ||| ||||| ||||||| || |   | ||| ||||||||| || |||||| |||||| || |||||||||||    
T  4107420 caaccagaacctaattctaacatcaaaatcaggcttacaacttcagaatccccatttt-atcataaaaccccaaaatctccaattcctcaccaaaacctg 4107518  T
Q  143 ttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||| |||||||||||  | ||| |||| | || ||||||||||| |||| |||||||||    
T  4107519 ttaaattcaaaatcagaaatcaaaatctatactactgaagtaaacctcacctttaccttag 4107579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 16222884 - 16222817
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||  ||||||||||||||    
T  16222884 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacaacacccttaccttag 16222817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 25464764 - 25464831
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  25464764 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 25464831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 30799045 - 30798843
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| | | | |||||||||||  |||| ||| |||||||||| |  | |    
T  30799045 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaacaaatactaacatcaaaaacatgattaaaacttcaaaatcc-tca 30798948  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || ||||||||||||||||  |||||||||| |||||   |||||||  |||||||||||  ||||||||    
T  30798947 ttctatcataaaaccccaaattcccaattcctcaccaaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaaccttacccttac 30798848  T
Q  199 cttag 203  Q
    |||||    
T  30798847 cttag 30798843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 8069053 - 8068852
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||| ||||||||||| || |||||| | | | | |||||| |||||||| ||||||||||||||||||  ||| |||| ||||| | |  |    
T  8069053 cactccccaaattagtttacagatacataattaagtgttt-tatgcaaccagaacctaattctaacatcaaattcatcattacaactccaaaatc-aaca 8068956  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| |||||||||||| |||  |||||||   || ||||| |||||||| ||||| |||||  ||||   ||||| || ||||||||||| |||||||||    
T  8068955 ttttatcataaaatcccaaaatcccaattctcactaaaactctgttaaattcaaattcagaaattaataactacactattgaagtaaacctcacccttac 8068856  T
Q  199 ctta 202  Q
    ||||    
T  8068855 ctta 8068852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 14615510 - 14615431
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||| |||||||||||||||||||||||||||| || ||  |||| | || ||||| ||||| ||||||||||||||    
T  14615510 caatttcaaccaaaacctgttaaactcaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttag 14615431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 19587803 - 19587728
Alignment:
Q  131 taccaaaacctgttaaactcaaaa-tcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||||||||||||||| ||||| |||| | |||| | |||||||| ||||| ||||||||||||||||    
T  19587803 taccaaaacctgttaaactcaaaaatcagaatttagaatctatactaatgaagcaaacctcacccttaccttagtt 19587728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 1537512 - 1537464
Alignment:
Q  178 tgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  1537512 tgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 1537464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 14374595 - 14374518
Alignment:
Q  127 tttctaccaaaacctgttaaactcaaaa-tcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||| |||||||||||||| ||||| |||| | |||| | |||||||| ||||| ||||||||||||||    
T  14374595 tttctaccaaaacttgttaaactcaaaaatcagaatttagaatctatactaatgaagcaaacctcacccttaccttag 14374518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 1071583 - 1071679
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaa-tgacaaatgcacagcaa 227  Q
    ||||||||||| |||| |||||||||||  ||||  |||| | || ||||| ||||| |||||||||||||||| |||| ||| |||||||||||||    
T  1071583 accaaaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagtttagaattgaaaaatgcacagcaa 1071679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 29926615 - 29926686
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||||||  ||||   ||||| || ||||| ||||| ||||||||||||||    
T  29926615 accaaaacctgttaaactcaaaatcagaagttaataactacactattgaagcaaacctcacccttaccttag 29926686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 14132273 - 14132229
Alignment:
Q  116 aaaatccccaatttctacca-aaacctgttaaactcaaaatcaga 159  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||    
T  14132273 aaaatccccaatttctaccataaacctgtttaactcaaaatcaga 14132229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 18787060 - 18787132
Alignment:
Q  151 aaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||||| || ||  |||||| || ||||||||||| ||||||||||||| ||||||| || |||||||||    
T  18787060 aaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagaaggaaaaatgcaca 18787132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 22797738 - 22797651
Alignment:
Q  122 cccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||| |||| ||||||||  ||||||||| || ||  |||||| || ||||||||||| ||||||||||||| ||||||    
T  22797738 cccaatttctaccataaacttgttaaacg-aaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcaga 22797651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 224
Target Start/End: Complemental strand, 23020628 - 23020505
Alignment:
Q  98 aatttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    |||||||||||||   ||||||| ||||||| |||||| ||| |||||||| |||||||||||  ||| | |||| | || ||||| ||||| |||||||    
T  23020628 aatttcatcataac--ccaaaattcccaatt-ctaccataactctgttaaa-tcaaaatcagaacttagaatctatactactgaagcaaacctcaccctt 23020533  T
Q  197 accttagttcagaatgacaaatgcacag 224  Q
    |||||| |||||||  ||||||||||||    
T  23020532 accttaattcagaagcacaaatgcacag 23020505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29926484 - 29926548
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaac 65  Q
    ||||||||||||||||||||||||   ||||||||| |||| ||||   ||||||||||||||||    
T  29926484 cactccccaaatcagtttacagatatgaattaacttactgtatgcactcagaacctatttctaac 29926548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 23232631 - 23232544
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||||||||||  || |    ||||| || ||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  23232631 aaacctgttaaaatcaaaatcagcattcattaactacactattgaagcaaacctcacccttaccttaattcagaaagacaaatgcaca 23232544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18786900 - 18786970
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||||||||||||||||  || |||  | |||| ||||  |||||||||||||||||| ||||    
T  18786900 cactccccaaatcagtttacagatgtgaaataaaatactgtatgcacttagaacctatttctaacaccaaa 18786970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 19819836 - 19819906
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    ||||| ||||||| ||||||||||| || | | ||||||  | ||||||||||| ||||||||||||||||    
T  19819836 aaaacttgttaaaatcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttaccttagtt 19819906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 2709304 - 2709341
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  2709304 cccaagttctaccaaaacctattaaactcaaaatcaga 2709341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 19468798 - 19468870
Alignment:
Q  138 acctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaa 210  Q
    |||||||||| ||||||||||| ||||    ||||| || ||||| ||||| ||||||||||||| |||||||    
T  19468798 acctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttaccttaattcagaa 19468870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 24721552 - 24721651
Alignment:
Q  128 ttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagca 226  Q
    ||||||||||| || ||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| || ||||||| ||||    
T  24721552 ttctaccaaaagcttgttaaac-caaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcatagca 24721650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 23887733 - 23887482
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||    
T  23887733 cactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaaattcatgattacaacttcaaaaactacaat 23887634  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  23887633 ttcatcataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttacct 23887534  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  23887533 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 23887482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 21605537 - 21605787
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||| ||| |||    
T  21605537 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacttcaaaa-ctacaat 21605635  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  21605636 ttcatcataacacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 21605735  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  21605736 taattcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 21605787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 70854 - 70603
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||| |||| ||||||||| |||    
T  70854 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagagcctatttctaacatcaaattcatgcttacaactccaaaaactacaat 70755  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  70754 ttcaacatcaaaaccaaaattcccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaatcccacccttacct 70655  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  70654 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 70603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24480939 - 24480737
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| |||||| | | |||    
T  24480939 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacatcaaaacccacaat 24480840  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  24480839 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 24480740  T
Q  201 tag 203  Q
    |||    
T  24480739 tag 24480737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 4070881 - 4070630
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |  ||    ||| ||||| | | |||    
T  4070881 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaatttacactccccactccaaaatccacaat 4070782  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  4070781 ttcaacataaaacccaaaatcctcaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaatcccacccttacct 4070682  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| || ||||||||    
T  4070681 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggtccttctctc 4070630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 11359584 - 11359381
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||| ||||||| | ||  |||||||||||||||||| ||||||| |||||| |||||||||||| | |||    
T  11359584 cactccccaaatcagtttacagatacaaattaattttctgtatacacttagaacctatttctaacaccaaattcctgcttacaacttcaaaaaccacaat 11359485  T
Q  101 tt-catcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaa-aatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    || || ||||||||||||||||||||| ||  || |||||||||||||||||| ||||||| | |||| |||||| || |||||||||||||||||||||    
T  11359484 ttccaacataaaatccaaaatccccaaatttcactaaaacctgttaaactcaataatcagaatctaaaatctacactattgaagtaaaccccacccttac 11359385  T
Q  199 ctta 202  Q
    ||||    
T  11359384 ctta 11359381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27038035 - 27038236
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||   ||||||||||||||| || |  |||||||||||||||||||||||||||  || | |||| ||||| | | |||    
T  27038035 cactccccaaatcagtttacagacataaattaactttctgtatgtacttagaacctatttctaacatcaaattcacactcacaactccaaaatccacaat 27038134  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||| ||||||||||||||||  |||||||||||||||||||||||||||| | |||| |||||| || ||||||||||| |||||||||||    
T  27038135 t-caacataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttacct 27038233  T
Q  201 tag 203  Q
    |||    
T  27038234 tag 27038236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 1062493 - 1062745
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | |  ||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  1062493 cactccccaaatcagtttacagatacataattaagtgt-tctacgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 1062590  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| || || | ||||| |||| |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||| ||||||||||    
T  1062591 ttttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaatcccaccctta 1062690  T
Q  198 ccttagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  1062691 ccttagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 1062745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 1067887 - 1068139
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | |  ||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  1067887 cactccccaaatcagtttacagatacataattaagtgt-tctacgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 1067984  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| || || | ||||| |||| |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||| ||||||||||    
T  1067985 ttttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaatcccaccctta 1068084  T
Q  198 ccttagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    |||||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  1068085 ccttagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 1068139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20850982 - 20851183
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaa-ttaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| |||| |||| | | | | |||||| |||| | | || |||||||||||||| ||||| |||||||||||    |     
T  20850982 cactccccaaatcagtttacagatacaaaattaagtgt-tctatgcaaccagaaaccaattttaacatcaaattcaggcttacaacttcaaaaatcccat 20851080  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||||| ||||||| ||||||||||||| ||  || ||||||||||||||||||||||||| |||||  |||||| || ||||||||||||||||||||||    
T  20851081 tttcaacataaaacccaaaatccccaaatttcactaaaacctgttaaactcaaaatcagaatttaacatctacactattgaagtaaaccccacccttacc 20851180  T
Q  200 tta 202  Q
    |||    
T  20851181 tta 20851183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22012479 - 22012253
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | ||| || |||||||| ||||||||| ||| |||  |||| |||| ||||| |  | |    
T  22012479 cactccccaaatcagtttacagatacataattaagtgt-tctatgcgaccagaacctaattctaacattaaaatcacccttacaactccaaaatcc-tca 22012382  T
Q  100 tttcatcataaaatcc-aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| || |||||| || ||||||||||||||  ||||||||||||||||||||||||||||  | ||   ||||| || ||||||||||| |||||||||    
T  22012381 ttttataataaaaccccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttac 22012282  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    |||| |||||||||| |||||||||||||    
T  22012281 cttaattcagaatgaaaaatgcacagcaa 22012253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27730279 - 27730481
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||| ||| |||||||||| |  | |    
T  27730279 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgtttacaacttcaaaatcc-tca 27730376  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||  ||||||| || |||||||||||| |||||||||||||||||||||   ||||| || ||||||||||| |||||||||    
T  27730377 ttctatcataaaaccccaaaatcccaattcctcaccaaaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttac 27730476  T
Q  199 cttag 203  Q
    |||||    
T  27730477 cttag 27730481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 44090430 - 44090208
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||| ||| |||||||||| |  | |    
T  44090430 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgtttacaacttcaaaatcc-tca 44090333  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||  ||||||| || ||||||||||||||||  |||||||||  |||||   |||||||  ||||||||||| |||||||||    
T  44090332 ttctatcataaaaccccaaaatcccaattcctcaccaaaacctgttaaatacaaaatcaggatttaataactacattcttgaagtaaacctcacccttac 44090233  T
Q  199 cttagttcagaatgacaaatgcaca 223  Q
    || | |||||||||| |||||||||    
T  44090232 ctcaattcagaatgaaaaatgcaca 44090208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 34843 - 35045
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||||||| |||||||||  |  | |    
T  34843 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgcttacaacttcaaattcc-tca 34940  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| || |||  ||||||| || ||||||||||||||||||||||||||||  | |    ||||| || ||||||||||| |||||||||    
T  34941 ttttatcataaaaccccaaaatcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttac 35040  T
Q  199 cttag 203  Q
    |||||    
T  35041 cttag 35045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 4078212 - 4078414
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||||| |||||||||||||  |||||||| |||||||||| | || |    
T  4078212 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacctaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 4078309  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | ||||||||||||||  |||||| ||| |||||   ||||| |  ||||||||||| |||||||||    
T  4078310 ttctatcataaaaccccaaattcccaattcctcatcaaaacctgttaaatacaaaattagaatttaataactacactcttgaagtaaacctcacccttac 4078409  T
Q  199 cttag 203  Q
    |||||    
T  4078410 cttag 4078414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 35243794 - 35243678
Alignment:
Q  109 aaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcag 208  Q
    |||| |||||||||||| |||  ||||||||||||||||||||||||||||  | ||   ||||| || ||||||||||| ||||||||||||| |||||    
T  35243794 aaaacccaaaatccccatttttcaccaaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcag 35243695  T
Q  209 aatgacaaatgcacagc 225  Q
    ||||| |||||| ||||    
T  35243694 aatgaaaaatgctcagc 35243678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11466812 - 11467014
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| || ||| ||| |||| | ||   |||||||||||||||||||||| ||||  ||| |||| ||||| | |  ||    
T  11466812 cactccccaaatcagtttacagatgtaatttatcttgctgtatacactcagaacctatttctaacatcaaaatcatcattacaactccaaaatc-aacat 11466910  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||||||||||||||| |||  |||||||   |||||||| |||||||| ||||| |||||  | ||| |||| | || ||||||||| | ||||||||||    
T  11466911 ttcatcataaaatcccaaaatcccaattctcaccaaaactctgttaaattcaaattcagaaatcaaaatctatactactgaagtaaatctcacccttacc 11467010  T
Q  200 ttag 203  Q
    ||||    
T  11467011 ttag 11467014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 19702716 - 19702629
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || | | ||||||  | ||||||||||| ||||||||||||||    
T  19702716 aaaattcccaatttctaccaaaacctgttaaactcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttaccttag 19702629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 22812946 - 22813022
Alignment:
Q  127 tttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||||||||||| || | | |||| | |||||||| ||||| ||||||||||||||    
T  22812946 tttctaccaaaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttaccttag 22813022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 17582687 - 17582600
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||| |||||  ||||| |||| | || ||||||||||| ||||||||||||| |||||||| | |||||||||||||    
T  17582687 ctgttaaactcaaactcagaaattaaaatctatactattgaagtaaacctcacccttaccttaattcagaataaaaaatgcacagcaa 17582600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 20724966 - 20725045
Alignment:
Q  127 tttctaccaaaacctgttaaactc-aaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||||||||||||||| ||||||||| |||| | |||||| |||||||| ||||| |||| |||||||||||    
T  20724966 tttctaccaaaacctgttaaactcaaaaatcagaatttagaatctacactaatgaagcaaacctcaccattaccttagtt 20725045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 19036432 - 19036541
Alignment:
Q  114 ccaaaatccccaatttctaccaa-aacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||||||||||||||||||| |||||||||||   ||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| |    
T  19036432 ccaaaatccccaatttctaccaataacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaagg 19036531  T
Q  213 acaaatgcac 222  Q
    ||||||||||    
T  19036532 acaaatgcac 19036541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2385264 - 2385062
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| | | || |||||||||| ||||||||| || ||||||| |   |     
T  2385264 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaaccaattataacatcaaaatcatgcttacaagttcaaaatccgcat 2385166  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| || |||| |||||||   |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||||| |||||||||    
T  2385165 ttt-atcataaaaccccaaattcccaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttac 2385067  T
Q  199 cttag 203  Q
    |||||    
T  2385066 cttag 2385062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24426183 - 24425981
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||| ||||||||||||||||| || |||||| | | | | |||||| |||| | | ||||||||||||| ||||||||| || ||||||| |  | |    
T  24426183 cactcctcaaatcagtttacagatacataattaagtgt-tatatgcaaccagaaaccaattctaacatcaaaatcatgcttacaagttcaaaatcc-tca 24426086  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| ||  ||| |||||||   |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||||| |||||||||    
T  24426085 ttttatcataaaacccctaattcccaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttac 24425986  T
Q  199 cttag 203  Q
    |||||    
T  24425985 cttag 24425981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 27272941 - 27273143
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||   |||||||||||  | ||||||| |||| ||||   |||||||||||||||||||||| ||||  ||| |||| ||||| | | | |    
T  27272941 cactccccaaactggtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcaaaatcatctttacaactccaaaatcaaca-t 27273039  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    | || ||||||| || |||  |||||||   |||||||| |||||||| ||||| |||||  ||||| |||| | || ||||||||||| ||||||||||    
T  27273040 tccaccataaaaccccaaaatcccaattctcaccaaaactctgttaaattcaaattcagaaattaaagtctatactactgaagtaaacctcacccttacc 27273139  T
Q  200 ttag 203  Q
    ||||    
T  27273140 ttag 27273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 30195715 - 30195653
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||| |||||||||| |||||| |||||| || ||||||||||| |||||||||||||    
T  30195715 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 30195653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 20938520 - 20938573
Alignment:
Q  150 caaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||| |||||  || ||||||||||||||||||||||||||    
T  20938520 caaaatcagactttaaaatctactctattgaagtaaaccccacccttaccttag 20938573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 23291862 - 23291966
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||  ||||||| ||||||| | ||  |||||||||||| ||||||||||| || ||  |||| | || ||||| ||||| |||||||||||    
T  23291862 ttcaacataaaccccaaaattcccaattcccacataaacctgttaaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacct 23291961  T
Q  201 tagtt 205  Q
    |||||    
T  23291962 tagtt 23291966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 205
Target Start/End: Original strand, 23333502 - 23333606
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||  ||||||| ||||||| | ||  |||||||||||| ||||||||||| || ||  |||| | || ||||| ||||| |||||||||||    
T  23333502 ttcaacataaaccccaaaattcccaattcccacgtaaacctgttaaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacct 23333601  T
Q  201 tagtt 205  Q
    |||||    
T  23333602 tagtt 23333606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 25106672 - 25106584
Alignment:
Q  136 aaacctgttaaactcaaaa-tcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| |||||| ||||| || |   |||||| || ||||||||||| ||||||||||||| ||||||| ||||| ||||||    
T  25106672 aaacctgttaaaatcaaaaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaattcagaaagacaattgcaca 25106584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 8889172 - 8889085
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| || |||| ||||||||||||    
T  8889172 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaatttagaaggacaaatgcaca 8889085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 14564760 - 14564823
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||  ||||  |||| | || ||||||||||| ||||||||||||||    
T  14564760 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttag 14564823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 20649049 - 20649136
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||||||||  |||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  20649049 aaacctgttaaatccaaaatcagaattaaataactatactactgaagcaaacctcacccttaccttaattcagaaagacaaatgcaca 20649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 22860941 - 22861024
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatg 219  Q
    |||||||||||| ||||||||||| || ||   ||| |||| ||||| ||| | ||||||||||||| ||||||| ||||||||    
T  22860941 aaacctgttaaaatcaaaatcagaattcaacaactatattactgaagcaaatctcacccttaccttaattcagaaagacaaatg 22861024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 15642508 - 15642438
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||| |||||||  ||||   ||| | || ||||||||||| |||||||||||||    
T  15642508 accaaaacctgttaaactcacaatcagaaattaataactatactattgaagtaaacctcacccttacctta 15642438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 24669050 - 24668966
Alignment:
Q  117 aaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaa-gtaaaccccacccttacctt 201  Q
    |||| |||||||||||||| ||||||||||||| |||||||||| ||  ||| ||||| || |||| ||||||||||||||||||||    
T  24669050 aaattcccaatttctaccagaaacctgttaaac-caaaatcagaattataat-ctacactattgaaagtaaaccccacccttacctt 24668966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 20913530 - 20913470
Alignment:
Q  141 tgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||| |||||||||| |||||| |||| | || ||||||||||| |||||||||||||    
T  20913530 tgttaaac-caaaatcagaatttaaaatctatactactgaagtaaacctcacccttacctta 20913470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 24653289 - 24653358
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||    ||||| || |||| |||||| ||||||||||||||||    
T  24653289 aaacctgttaaaatcaaaatcagaatttatcaactacactattgaaataaacctcacccttaccttagtt 24653358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 24659746 - 24659815
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||    ||||| || |||| |||||| ||||||||||||||||    
T  24659746 aaacctgttaaaatcaaaatcagaatttatcaactacactattgaaataaacctcacccttaccttagtt 24659815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 25268175 - 25268255
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaa 216  Q
    ||||||||||||  |||||||||| || |||  ||| | || ||||| ||||| ||||||||||||| ||||||| |||||    
T  25268175 aaacctgttaaatccaaaatcagaattcaaaaactatactactgaagcaaacctcacccttaccttaattcagaaggacaa 25268255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 26396426 - 26396676
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||| ||| |||    
T  26396426 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacttcaaaa-ctacaat 26396524  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  26396525 ttcatcataaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 26396624  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| |||||||| |||| | |||||||||| |||||||||||    
T  26396625 taattcagaatgaaaaatgcaccgcaaaaagggttcctctggttcttctctc 26396676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11937910 - 11938112
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  11937910 cactccccaaatcagtttacagatgcaaaataactttctgtatgcacttagaacctatttctaacaccaaattcatgcttacaacttcaaaaactacaat 11938009  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||||||    
T  11938010 ttcaacataaaacccaaaatccccaatttttaccgaaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacct 11938109  T
Q  201 tag 203  Q
    |||    
T  11938110 tag 11938112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 39265603 - 39265376
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||| ||| || |  |||||||||||||||||||||||||||  || | |||| ||||| | | |||    
T  39265603 cactccccaaatcagtttacagatacaaattaactttttgtatgtacttagaacctatttctaacatcaaattcacactcacaactccaaaatccacaat 39265504  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||||| | |||| |||||| || ||||||||||| |||||||||||    
T  39265503 ttcaacataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaatctaaagtctacactattgaagtaaacctcacccttacct 39265404  T
Q  201 tagttcagaa-tgacaaatgcacagcaa 227  Q
    ||||| |||| ||| |||||||||||||    
T  39265403 tagtttagaattgaaaaatgcacagcaa 39265376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 23435323 - 23435121
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| || |  ||||||||||||||||||||||||| |  || | |||| ||||| | | |||    
T  23435323 cactccccaaatcagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacatcaaatttacactcacaactccaaaatccacaat 23435224  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||| || ||||||||||| |||||||||||    
T  23435223 ttcaacataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaatttaaagtctacactattgaagtaaacctcacccttacct 23435124  T
Q  201 tag 203  Q
    |||    
T  23435123 tag 23435121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 29382108 - 29381881
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  29382108 cactccccaaatcagtttacagatacaaattaactttctgtatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattc-atcat 29382010  T
Q  101 ttcatcat-aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||| |||| ||||  |||||||||   |||||||| ||||||||| |||||||||| |||||   |||||||| ||||||||||| || ||||||    
T  29382009 ttcatcataaaaacccaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattattgaagtaaacctcatccttac 29381910  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    |||| |||||||||| |||||||||||||    
T  29381909 cttaattcagaatgaaaaatgcacagcaa 29381881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3259335 - 3259090
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||| ||||||||||| || |||||| | | | |||||||| |||| ||| |||||||||||| |||||||||| |||||||||| | || |    
T  3259335 cactccccaaattagtttacagatacataattaagtgt-tctgtgcaaccagaaactaattctaacatcaatttcatgcttacaacttcaaaatc-atca 3259238  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| || |||  ||||||| || ||||||||||||||||||||||||||||||| ||   ||||| || ||| ||||||| |||||||||    
T  3259237 ttttatcataaaaccccaaaatcccaattcctcaccaaaacctgttaaactcaaaatcagacttaaatagctacaatactgaggtaaacctcacccttac 3259138  T
Q  199 cttagttcagaatgacaaatgcacagcaacaggggttcctctagttct 246  Q
    |||| |||||||||| ||||||||||||| | |||||||||| |||||    
T  3259137 cttaattcagaatgaaaaatgcacagcaaaaagggttcctctggttct 3259090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 44657112 - 44656909
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  44657112 cactccccaaatcagtttacatatacaaattaactttctgtatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattc-atcat 44657014  T
Q  101 ttcatcat-aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||| |||||||||  |||||||||   |||||||| ||||||||| |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  44657013 ttcatcataaaaatccaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 44656914  T
Q  199 cttag 203  Q
    |||||    
T  44656913 cttag 44656909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29448019 - 29447817
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| | | || |||||||||||||| ||||| |||||||||||    |     
T  29448019 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaaccaattttaacatcaaattcaggcttacaacttcaaaaatcccat 29447921  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactc-aaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||| ||||||||||||||||||||| ||  || |||||||||||||||| ||||||||| | |||  |||||| || |||||||||||||||||||||    
T  29447920 tttcaacataaaatccaaaatccccaaatttcactaaaacctgttaaactcaaaaatcagaatctaacatctacactattgaagtaaaccccacccttac 29447821  T
Q  199 ctta 202  Q
    ||||    
T  29447820 ctta 29447817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 7359986 - 7360211
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | ||| || |||||||| ||||||||||||| |||  |||| |||| ||||| |  | |    
T  7359986 cactccccaaatcagtttacagatacataattaagtgt-tctatgcgaccagaacctaattctaacatcaaaatcacccttacaactccaaaatcc-tca 7360083  T
Q  100 tttcatcataaaatcc-aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| || ||||||||||||||  || |||||||||||||||||||||||||  | ||   ||||| || ||||||||||| |||||||||    
T  7360084 ttttatcataaaaccccaaaatccccaattttcac-aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttac 7360182  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    |||| |||||||||| |||||||||||||    
T  7360183 cttaattcagaatgaaaaatgcacagcaa 7360211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 5939663 - 5939900
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  |||||||||||||||||||| ||||||  || | |||| ||||| | |  ||    
T  5939663 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttctaacatcgaattcacactcacaactccaaaatc-aacat 5939761  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaa--cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||||||| || |||   ||||||   || ||||   |||||||| ||||| |||||  |||    ||||| || ||||||||||| |||||||||    
T  5939762 ttcatcataaaaccccaaaattccaattctcactaaaaactctgttaaattcaaattcagaaattagtaactacactattgaagtaaacctcacccttac 5939861  T
Q  199 cttagttcagaatgacaaatgcacagcaacaggggttcc 237  Q
    |||| |||||||||| ||||||||||||| | |||||||    
T  5939862 cttaattcagaatgagaaatgcacagcaaaaagggttcc 5939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29454703 - 29454501
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| | | || |||||||||||||| ||||| |||||||||||    |     
T  29454703 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaaccaattttaacatcaaattcaggcttacaacttcaaaaatcccat 29454605  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactc-aaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||| ||||||| ||||||||||||| ||  || |||||||||||||||| ||||||||| | |||  |||||| || |||||||||||||||||||||    
T  29454604 tttcaacataaaacccaaaatccccaaatttcactaaaacctgttaaactcaaaaatcagaatctaacatctacactattgaagtaaaccccacccttac 29454505  T
Q  199 ctta 202  Q
    ||||    
T  29454504 ctta 29454501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 44663041 - 44662830
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaac------ 94  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  |          
T  44663041 cactccctaaatcagtttacagatacaaattaactttctgtatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattcatcatt 44662942  T
Q  95 -tataatttcatcat-aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaacccca 191  Q
      || |||||||||| |||| ||||  |||||||||   |||||||| ||||||||| |||||||||| |||||   |||||||  ||||||||||| ||    
T  44662941 tcatcatttcatcataaaaacccaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctca 44662842  T
Q  192 cccttaccttag 203  Q
    ||||||||||||    
T  44662841 cccttaccttag 44662830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 45141891 - 45141686
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||  || | |||| ||||||  |  ||    
T  45141891 cactccccaaatcagtttacagatgtaaattagctttctgtatgcacttagaacctatttctaacatcaaattcacactcacaactccaaaaatcaacat 45141792  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| || |||  |||||||   || ||||| |||||||| ||||| | |||  |||    ||||| || ||||||||||| ||||||||||    
T  45141791 ttcatcataaaaccccaaaatcccaattctcactaaaactctgttaaattcaaatttagaaattagtaactacactattgaagtaaacctcacccttacc 45141692  T
Q  200 ttagtt 205  Q
    ||||||    
T  45141691 ttagtt 45141686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 50083092 - 50083182
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  50083092 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 50083182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 52501288 - 52501514
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| || | ||| ||||||||||||| ||||| ||| |||||||||| |  | |    
T  52501288 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccaggaactaattctaacatcaaaatcatgtttacaacttcaaaatcc-tca 52501385  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| |||||||  | ||||||||||||||||  |||||||||  |||||   |||||||  ||||||||||| |||||||||    
T  52501386 ttctatcataaaaccccaaattcccaattcttcaccaaaacctgttaaatacaaaatcaggatttaataactacattcttgaagtaaacctcacccttac 52501485  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    |||| |||||||||| |||||||||||||    
T  52501486 cttaattcagaatgaaaaatgcacagcaa 52501514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 1584647 - 1584848
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||| ||||||||||| || |||||| | | | | |||||| |||||||| ||||||||||||| |||  |||| |||| ||||| |  | |    
T  1584647 cactccccaaattagtttacagatacataattaagtgt-tctatgcaaccagaacctaattctaacatcaaaatcacccttacaactccaaaatcc-tca 1584744  T
Q  100 tttcatcataaaatcc-aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||| ||| || ||||||||||||||  ||||||||||||||||||||||||||||  | ||   ||||| || ||||||||||| |||||||||    
T  1584745 ttttatcatgaaaccccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttac 1584844  T
Q  199 ctta 202  Q
    ||||    
T  1584845 ctta 1584848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19127686 - 19127458
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||| ||||| ||||||||||||  | ||||||| |||| ||||   |||||||||||||||||||| | |||   |   |||| ||||| | || ||    
T  19127686 cactccgcaaattagtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcagaatcacaatctcaactccaaaatc-atcat 19127588  T
Q  101 ttcatcat--aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    |||||||   |||| ||||||||||||||||  |||| ||| ||||||||||| ||||||||  ||||  |||| | || ||||||||||| ||||||||    
T  19127587 ttcatcaccaaaaacccaaaatccccaattttcaccagaactctgttaaactccaaatcagaaattaatgtctatactactgaagtaaacctcaccctta 19127488  T
Q  198 ccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||| |||||||||| |||| ||||||||    
T  19127487 ccttaattcagaatgaaaaattcacagcaa 19127458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 51931393 - 51931325
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||| |||||| | |||| || ||||||||||||||||||||||||||    
T  51931393 aaaacctgttaaactcaaaatcagaatttaaaatatacactattgaagtaaaccccacccttaccttag 51931325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 30239971 - 30240080
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||||| ||  |||||||||| || |||||||||| ||||||       
T  30239971 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattgaaaatctacactaccgaagtaaacctcatccttaccttaattcagatga 30240069  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  30240070 acaaatgcaca 30240080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 203
Target Start/End: Complemental strand, 37622644 - 37622448
Alignment:
Q  7 ccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcat 105  Q
    |||||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||||||| ||||| |||| |  | |||| ||    
T  37622644 ccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgcttacaactttaaaatcc-tcattttat 37622547  T
Q  106 cataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||| || |||  ||||||| || ||||||||||||||||||||||||||||  | |    ||||| || ||||||||||| ||||||||||||||    
T  37622546 cataaaaccccaaaatcccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttaccttag 37622448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 391905 - 392107
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || ||||||   | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  391905 cactccccaaatcagtttacagatacataattaagggt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 392002  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | ||||||||||||||  | |||||||| |||||   ||||| |  ||||||||||| |||||||||    
T  392003 ttctatcataaaaccccaaattcccaattcctcatcaaaacctgttaaatacgaaatcagaatttaataactacactcttgaagtaaacctcacccttac 392102  T
Q  199 cttag 203  Q
    |||||    
T  392103 cttag 392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 53904579 - 53904468
Alignment:
Q  116 aaaatccccaatttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    ||||||||||||||||||||||| || ||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| ||     
T  53904579 aaaatccccaatttctaccaaaagcttgttaaac-caaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaa 53904481  T
Q  215 aaatgcacagcaa 227  Q
    |||||||||||||    
T  53904480 aaatgcacagcaa 53904468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 18272215 - 18272321
Alignment:
Q  114 ccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatga 213  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||| ||| ||    
T  18272215 ccaaaatccccaatttctaccataacttgttaaa-tcaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcggaagga 18272313  T
Q  214 caaatgca 221  Q
    ||||||||    
T  18272314 caaatgca 18272321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 3265829 - 3265762
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  3265829 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 3265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 14063669 - 14063745
Alignment:
Q  127 tttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||| ||||||||||||||||||| || ||  |||| | |||||||| ||||| ||||||||||||||    
T  14063669 tttctaccaaaacgtgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttaccttag 14063745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 21397554 - 21397725
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  || ||||||| |||| | ||   |||||| |||||||||||||||   |  || | |||| ||||  | | |||    
T  21397554 cactccccaaatcagtttacagatataatttaacttgctgtatacactcagaacccatttctaacatcaaaactacactcacaactccaaattcaacaat 21397653  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctaca 173  Q
    | || |||||||||| |||  ||||||||  |||||||||||||||||||||||||||| | |||| ||||||    
T  21397654 t-caacataaaatcccaaaatcccaattttcaccaaaacctgttaaactcaaaatcagaatctaaaatctaca 21397725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33222080 - 33222303
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||||  | |||||||  ||| ||||   |||||||||||||||||||| | |||   |   |||  ||||| | || ||    
T  33222080 cactccccaaatcagtttacagatgtgagttaacttattgtatgcactcagaacctatttctaacatcagaatcacaatctcaaccccaaaatc-atcat 33222178  T
Q  101 ttcatcataaaatcca-aaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||| |||| ||  |||||||||||||  |||| ||| ||||||||| |||||||||| || ||  |||| | || ||||| ||||| |||||||||    
T  33222179 ttcgtcacaaaaaccccaaatccccaattttcaccagaactctgttaaacacaaaatcagaattcaatgtctatactactgaagcaaacctcacccttac 33222278  T
Q  199 cttagttcagaatgacaaatgcaca 223  Q
    |||| |||||||||| |||||||||    
T  33222279 cttaattcagaatgaaaaatgcaca 33222303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47870404 - 47870336
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||| |||||||||| |||| | ||   ||||||||||||||||||||    
T  47870404 cactccccaaatcagtttacagatgtaaattaacttactgtatacactcagaacctatttctaacatca 47870336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 49240054 - 49239987
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  49240054 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 49239987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 49748768 - 49748701
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  49748768 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 49748701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 900467 - 900534
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||| | |||||| |||| | || ||||||||||| |||||||||||||    
T  900467 aaaacctgttaaactcaaaatcataatttaaaatctatactactgaagtaaacctcacccttacctta 900534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 31665788 - 31665989
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||  |||||||||||  | ||||||| |||| ||||   |||||||||||||||||||||| ||||   |  |||| ||||| | || ||    
T  31665788 cactccccaaattggtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcaaaatcatcaattcaactccaaaatc-atcat 31665886  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||||||||||||||| |||  |||||||    ||||||| |||||||||||||| |||||  ||||| || | | || |||| |||||| ||||||||||    
T  31665887 ttcatcataaaatcccaaaatcccaattcactccaaaactctgttaaactcaaattcagaaattaaa-tcaatactactgaaataaacctcacccttacc 31665985  T
Q  200 ttag 203  Q
    ||||    
T  31665986 ttag 31665989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 42221267 - 42221370
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||||||| |||| ||| |||||||||||   |||||||| |||||||||||||||||||  ||||  |||| | || ||||| ||||| |||||||||    
T  42221267 atttcatcacaaaacccataatccccaattctcaccaaaacttgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttac 42221366  T
Q  199 ctta 202  Q
    ||||    
T  42221367 ctta 42221370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 33097930 - 33098035
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||| |||||||||||   |||||||| ||||||||||||||||||||  ||||  |||| | || ||||| ||||| ||||||||    
T  33097930 atttcatcacaaaacccataatccccaattctcaccaaaactctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcaccctta 33098029  T
Q  198 ccttag 203  Q
    ||||||    
T  33098030 ccttag 33098035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 41528314 - 41528233
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||| |||||||||||||||||||||||||||||||| || | | || | |  | ||||||||||| ||||||||||||||    
T  41528314 cccaagttctaccaaaacctgttaaactcaaaatcagaattcagaatcaatacaattgaagtaaacctcacccttaccttag 41528233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 15325827 - 15325899
Alignment:
Q  127 tttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||||||||||||||| ||||||||||||||||| || | | |||| | |||||||| ||||| ||||||||||    
T  15325827 tttctaccaaaacctattaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacc 15325899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 16228353 - 16228246
Alignment:
Q  116 aaaatccccaatttctaccaaaa-cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    ||||||||||||||||||||||| | |||||||| |||||||||| |||||   ||||| || ||||| ||||| |||||||||||||  |||||   ||    
T  16228353 aaaatccccaatttctaccaaaagcttgttaaac-caaaatcagaatttaataactacactattgaagcaaacctcacccttaccttaaatcagatgaac 16228255  T
Q  215 aaatgcaca 223  Q
    |||||||||    
T  16228254 aaatgcaca 16228246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 20890105 - 20890264
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||  |||||||||||  | ||||||| |||| ||||   |||||||||||||||||||||| ||||  ||  |||| ||||| | ||  |    
T  20890105 cactccccaaattggtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcaaaatcatcattccaactccaaaatc-atctt 20890203  T
Q  101 ttcatcataaaa-tccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcaga 159  Q
    ||| ||||||||  |||||||||||||||   |||||||| ||||||||| ||||||||||    
T  20890204 ttcctcataaaaccccaaaatccccaattctcaccaaaactctgttaaacacaaaatcaga 20890264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 47871774 - 47871571
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||| ||||||| ||||||||||||  | ||||||| |||| ||||   |||||||||||||||||||| | |||   |   |||  ||||| | || ||    
T  47871774 cacttcccaaattagtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcagaatcacaatctcaaccccaaaatc-atcat 47871676  T
Q  101 ttcatcataaaatcc-aaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||||| |||| || |||||||||||||| ||| | ||| ||||||||| ||||||||||  ||||  |||||| || ||||||||||| |||| ||||    
T  47871675 ttcatcacaaaaacccaaaatccccaatttttactagaactctgttaaacccaaaatcagaaattaacatctacactactgaagtaaacctcaccattac 47871576  T
Q  199 cttag 203  Q
    |||||    
T  47871575 cttag 47871571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 10783531 - 10783410
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||  ||| |||||||||||||||||| ||||||||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||    
T  10783531 ttcatcataaac-ccataatccccaatttctaccataaacctgttaaac-caaaatcagaattcaataactatactactgaagcaaacctcacccttacc 10783434  T
Q  200 ttagttcagaatgacaaatgcaca 223  Q
    ||| ||||||   |||||||||||    
T  10783433 ttaattcagatgaacaaatgcaca 10783410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 10972182 - 10972061
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||  ||| |||||||||||||||||| ||||||||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||    
T  10972182 ttcatcataaac-ccataatccccaatttctaccataaacctgttaaac-caaaatcagaattcaataactatactactgaagcaaacctcacccttacc 10972085  T
Q  200 ttagttcagaatgacaaatgcaca 223  Q
    ||| ||||||   |||||||||||    
T  10972084 ttaattcagatgaacaaatgcaca 10972061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 16999395 - 16999352
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  16999395 aaaattcccaatttctactaaaacctgttaaactcaaaatcaga 16999352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 17177317 - 17177404
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||||||||||| ||  |   ||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  17177317 aaacctgttaaaatcaaaatcagaattctacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcaca 17177404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 18165519 - 18165413
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||| ||||||| |||||||||| |||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| | ||||| || |    
T  18165519 aaaattcccaattcctaccaaaacttgttaaacccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaatccagaa-gaaa 18165421  T
Q  216 aatgcaca 223  Q
    ||||||||    
T  18165420 aatgcaca 18165413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 20895732 - 20895934
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||  |||||||||||  | ||||||| |||| ||||   |||||||||||||||||||||| ||||  ||  |||| ||||| | ||  |    
T  20895732 cactccccaaattggtttacagatgtgagttaacttactgtatgcactcagaacctatttctaacatcaaaatcatcattgcaactccaaaatc-atctt 20895830  T
Q  101 ttcatcataaaa-tccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||  |||||||||||||||   |||||||| ||||||||| |||||||| |  ||||   ||| | || ||||||||| | |||||||||    
T  20895831 ttcctcataaaaccccaaaatccccaattctcaccaaaactctgttaaacacaaaatcataaattaatagctatactactgaagtaaatctcacccttac 20895930  T
Q  199 ctta 202  Q
    ||||    
T  20895931 ctta 20895934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 14991860 - 14991772
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||| || ||  |||||| || ||||| ||||| |||||||||||||    
T  14991860 ccaaaatccctaatttcaaccataaacctgttaaa-tcaaaatcagaattaaacatctacactactgaagcaaacctcacccttacctta 14991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 15004368 - 15004280
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||| || ||  |||||| || ||||| ||||| |||||||||||||    
T  15004368 ccaaaatccctaatttcaaccataaacctgttaaa-tcaaaatcagaattaaacatctacagtactgaagcaaacctcacccttacctta 15004280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 13480213 - 13480150
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||  || || |||| | || ||||||||||| ||||||||||||||    
T  13480213 ctgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttag 13480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41528434 - 41528364
Alignment:
Q  1 cactccccaaatcagtttacagatgc-aaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||||||||||||||||| ||| ||| | | ||| |||||| |||||||| |||||||||||||    
T  41528434 cactccccaaatcagtttacagatgctaaactaagtgt-tgtatgcaaccagaacctaattctaacatcaaa 41528364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 42955388 - 42955186
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||   ||||||| ||  | ||||||| |||| ||||   |||||||||||||||||||||| ||||  ||| |||| ||||| | | | |    
T  42955388 cactccccaaattgatttacagttgtgagttaacttactgtatgcactcagaacctatttctaacatcaaaatcatcattacaactccaaaatcaacact 42955289  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    | || ||||||| || |||   ||||||   |||||||| |||||||| ||||| |||||  ||||| |||| | || ||||||||||| ||||||||||    
T  42955288 t-caccataaaaccccaaaattccaattctcaccaaaactctgttaaattcaaattcagaaattaaagtctatactactgaagtaaacctcacccttacc 42955190  T
Q  200 ttag 203  Q
    ||||    
T  42955189 ttag 42955186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 45958947 - 45958884
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||  ||||| | || | || ||||||||||| ||||||||||||||    
T  45958947 ctgttaaactcaaaatcagaaattaaaatatatactactgaagtaaacctcacccttaccttag 45958884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 54825378 - 54825315
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||  || || |||| | || ||||||||||| ||||||||||||||    
T  54825378 ctgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttag 54825315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 16485592 - 16485641
Alignment:
Q  110 aaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcaga 159  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  16485592 aaatccaaaatccccaatttctaccataaatctgttaaa-tcaaaatcaga 16485641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17177172 - 17177242
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||| ||||||||||| | || |||||| |||| ||||   |||||||||||| |||||||||    
T  17177172 cactccccaaattagtttacagatacgaaataacttgctgtatgcactcagaacctatttcaaacatcaaa 17177242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 14555283 - 14555214
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||   ||||||  | |||| |||||| ||||||||||||||||    
T  14555283 aaacctgttaaaatcaaaatcagaatttagcatctacacaattgaattaaacctcacccttaccttagtt 14555214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 21882463 - 21882532
Alignment:
Q  134 caaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||||||||  ||||   ||| | || ||||| ||||| ||||||||||||||    
T  21882463 caaaacctgttaaactcaaaatcagaaattaatagctatactactgaagcaaacctcacccttaccttag 21882532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 900333 - 900401
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    |||||||||||| ||||||||||||  ||||||||| |||| | ||   |||||||||| |||||||||    
T  900333 cactccccaaattagtttacagatgtgaattaacttgctgtatacactcagaacctattcctaacatca 900401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 30396985 - 30397089
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| |||||||||| | | ||  | ||||| ||||||||||||||||||||  ||||  |||| | || ||||| ||||| ||||||||    
T  30396985 atttcatcacaaaacccaaaatcccaattctcaccaaaaactctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcaccctta 30397084  T
Q  198 cctta 202  Q
    |||||    
T  30397085 cctta 30397089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42221170 - 42221238
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||| ||||||||||||||||||   ||||||||| |||| | ||   ||||||||||||||||||||    
T  42221170 cactctccaaatcagtttacagatatgaattaacttgctgtatacactcagaacctatttctaacatca 42221238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 49051918 - 49051990
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttca 207  Q
    ||||||||||||||||||||||||| || ||   ||| | || ||||||||| | ||||||||||||| ||||    
T  49051918 aaaacctgttaaactcaaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 49051990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 1318557 - 1318806
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||| |||||||||| ||| |||    
T  1318557 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacaacaaattcatgcttacaacttcaaaa-ctacaat 1318655  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  1318656 ttcatca-aaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 1318754  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  1318755 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 1318806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 49151378 - 49151629
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||    
T  49151378 cactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaaattcatgattacaacttcaaaaactacaat 49151477  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||    
T  49151478 ttcatcataaaacccaaaatccccaatttccaccaaaacctgttaaactcaaaatcagactttaatttctacaccattgaagtaaaccccacccttacct 49151577  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| |||||||| |||| | |||||||||| |||||||||||    
T  49151578 tagttcagaatgaaaaatgcaccgcaaaaagggttcctctggttcttctctc 49151629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 49158068 - 49158319
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||    
T  49158068 cactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaaattcatgattacaacttcaaaaactacaat 49158167  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||    
T  49158168 ttcatcataaaacccaaaatccccaatttccaccaaaacctgttaaactcaaaatcagactttaatttctacaccattgaagtaaaccccacccttacct 49158267  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| |||||||| |||| | |||||||||| |||||||||||    
T  49158268 tagttcagaatgaaaaatgcaccgcaaaaagggttcctctggttcttctctc 49158319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 40922302 - 40922050
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||  ||||||||||||||||||| ||||||||| ||| ||| |||||| | | |||    
T  40922302 cactccccaaatcagtttacagatggaaattaactttctgtatacacttagaacctatttctaacattaaattcatgtttacaacatcaaaacccacaat 40922203  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  40922202 ttcaacataaaacccaaaatccccaatttttacccaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 40922103  T
Q  201 tagttcagaatgacaaatgcacagc-aacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||| || |||| ||||||| |||| ||||||    
T  40922102 tagttcagaatgaaaaatgcacagcaaaaagggattcctctggttcctctctc 40922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 8196580 - 8196379
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||  |||||||||||||||||||||| |||||||||| ||| ||||||   | |||    
T  8196580 cactccccaaatcagtttacagatgcaaattaattttctgtatacacttagaacctatttctaacatcaacttcatgcttacaacatcaaaattcacaat 8196481  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  8196480 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 8196381  T
Q  201 ta 202  Q
    ||    
T  8196380 ta 8196379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 2025604 - 2025402
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||| |  || | |||| ||||| | | |||    
T  2025604 cactccccaaatcagtttacagatgcaaattaactttctgtatgtacttagaacctatttctaacatcaaatttacactcacaactccaaaatccacaat 2025505  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||| || ||||||||||| |||||||||||    
T  2025504 ttcaacataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaatttaaagtctacactattgaagtaaacctcacccttacct 2025405  T
Q  201 tag 203  Q
    |||    
T  2025404 tag 2025402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 643339 - 643565
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  643339 cactccccaaatcagtttacagatacaaattaactttctgtatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattc-atcat 643437  T
Q  101 ttcatcataaaatc-caaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||||||| | |||  |||||||||   |||||||| ||||||||| |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  643438 ttcatcataaaaactcaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 643537  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||| |||||||||||||    
T  643538 cttagttcagaatga-aaatgcacagcaa 643565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 42059344 - 42059545
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  42059344 cactccccaaatcagtttacagatgcaaattaactttctgtatgcactcagaacctatttctaacatcaaattcatgcttacaacttc-aaaactacaat 42059442  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| ||||  |||| ||||   |||||||| ||||||||| ||||||||||  | ||   ||| |||| ||||| ||||| ||||||||||    
T  42059443 ttcatcataaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttacc 42059542  T
Q  200 tta 202  Q
    |||    
T  42059543 tta 42059545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 32628194 - 32628399
Alignment:
Q  1 cactccccaaatcagtttaca--gatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaa-ctat 97  Q
    |||| ||||||||||||||||  ||| |||||||||||||||| || |  ||||| |||||||||||||||||||||  || | |||| |||||| | |     
T  32628194 cacttcccaaatcagtttacacagatacaaattaactttctgtatgtacttagaatctatttctaacatcaaattcacactcacaactccaaaaatccac 32628293  T
Q  98 aatttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||| ||||||| ||||||||| ||||||  |||||||||||||||||||||||||||| |||||| |||||| || | ||||||||| ||||||||    
T  32628294 aatttcaacataaaacccaaaatcctcaattttcaccaaaacctgttaaactcaaaatcagaatttaaagtctacactattaaagtaaacctcaccctta 32628393  T
Q  198 ccttag 203  Q
    ||||||    
T  32628394 ccttag 32628399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 246
Target Start/End: Complemental strand, 18436529 - 18436327
Alignment:
Q  43 tgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttct-accaaaacct 141  Q
    |||||| |||| ||| |||||||||||||| |||||||| |||||||||| | || |||| ||||||||| || |||  ||||||| || ||||||||||    
T  18436529 tgcaaccagaaactaattctaacatcaaat-catgcttacaacttcaaaatc-atcattttatcataaaaccccaaaatcccaattcctcaccaaaacct 18436432  T
Q  142 gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggttcctcta 241  Q
    || |||||||||||||||||||||   ||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| | ||||||||||     
T  18436431 gtcaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaagggttcctctg 18436332  T
Q  242 gttct 246  Q
    |||||    
T  18436331 gttct 18436327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 13453181 - 13452980
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  ||||||||||||| | |||||||||||  ||   |||| | ||||  || ||    
T  13453181 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttccagcatcaaattcacactcccaactcccaaaatcatcat 13453082  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  | ||   ||||| || ||||||||||| |||||||||||    
T  13453081 tccaacataaaacccaaaatccccaatttccaccaaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttacct 13452982  T
Q  201 ta 202  Q
    ||    
T  13452981 ta 13452980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 43 - 246
Target Start/End: Original strand, 11340573 - 11340776
Alignment:
Q  43 tgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttct-accaaaacct 141  Q
    |||||| |||| ||| ||||||||||||| || |||||| ||| |||||| | || ||||  |||||||| || |||  | ||||| || ||||||||||    
T  11340573 tgcaaccagaaactaattctaacatcaaaatcctgcttacaacatcaaaatc-atcattttgtcataaaaccccaaaatctcaattcctcaccaaaacct 11340671  T
Q  142 gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggttcctcta 241  Q
    ||||||||||||||||||||||||   ||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| | ||||||||||     
T  11340672 gttaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaagggttcctctg 11340771  T
Q  242 gttct 246  Q
    |||||    
T  11340772 gttct 11340776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 21758084 - 21758285
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||  ||||||||||||| | |||||||||||  ||   |||| | ||||  || ||    
T  21758084 cactccccaaatcagtttacagatataaattaactttctgtatgcacttagaacctatttcaagcatcaaattcacactcccaactcccaaaatcatcat 21758183  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||| |||||||||| |||||| || |||||||||||||||||||||||||  | ||   ||||| || ||||||||||| |||||||||||    
T  21758184 tccaacataaaacccaaaatcccaaatttccactaaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttacct 21758283  T
Q  201 ta 202  Q
    ||    
T  21758284 ta 21758285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 98 - 202
Target Start/End: Complemental strand, 8213184 - 8213082
Alignment:
Q  98 aatttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  8213184 aatttcaacataaaacccaaaatccccaattt-taccaaaac-tgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccaccctta 8213087  T
Q  198 cctta 202  Q
    |||||    
T  8213086 cctta 8213082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30602242 - 30601997
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | |   |||||| |||||| | |||||||||||||  |||||||| |||| ||||| |  | |    
T  30602242 cactccccaaatcagtttacagatacataattaagtgtttca-tgcaaccagaacccaattctaacatcaaaaacatgcttacaactgcaaaatcc-tca 30602145  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  | ||||||| || |||| ||||||| || ||||||||||||||||  |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  30602144 ttctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 30602045  T
Q  199 cttagttcagaatgacaaatgcacagcaacaggggttcctctagttct 246  Q
    |||| |||||||||| ||||||||||||| | |||||||||| |||||    
T  30602044 cttaattcagaatgaaaaatgcacagcaaaaagggttcctctggttct 30601997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 26113005 - 26112912
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  26113005 ccaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 26112912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 26119622 - 26119529
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  26119622 ccaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 26119529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 33405574 - 33405668
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||| || ||||||| |||||||||||||    
T  33405574 ccaaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatttagaatgaaaaatgcacagcaa 33405668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 5186490 - 5186373
Alignment:
Q  135 aaaacctgttaaactcaaaatcagacttt-aaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacagggg 233  Q
    ||||||||||||||||||| ||||||||| ||| |||| | || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| | |||    
T  5186490 aaaacctgttaaactcaaa-tcagacttttaaaatctatactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaaggg 5186392  T
Q  234 ttcctctagttcttctctc 252  Q
    ||||||| |||||||||||    
T  5186391 ttcctctggttcttctctc 5186373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 26089200 - 26089107
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||  ||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  26089200 ccaaaacctgttaaaaccaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 26089107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20019054 - 20018982
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaatt 73  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  20019054 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaatt 20018982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11879857 - 11880059
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  11879857 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 11879954  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | ||||||||||||||  |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  11879955 ttctatcataaaaccccaaattcccaattcctcatcaaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 11880054  T
Q  199 cttag 203  Q
    |||||    
T  11880055 cttag 11880059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 12399220 - 12399019
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||  |||||||||||||||||| ||||| ||  ||||  ||||||||  | || ||    
T  12399220 cactccccaaatcagtttacagatacaaattaattttctgtatgcacttagaacctatttctaacaccaaatacactcttactacttcaaattc-atcat 12399122  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||| ||||||| || || | |||||||   || ||||| ||||||||| ||||||||||  | ||   |||||||| ||||||||||| ||||||||||    
T  12399121 ttcaccataaaa-cccaatttcccaattctcactaaaactctgttaaacacaaaatcagaaatcaataactacattactgaagtaaacctcacccttacc 12399023  T
Q  200 ttag 203  Q
    ||||    
T  12399022 ttag 12399019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 11298948 - 11298828
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg--acaaatgcacagcaaca 229  Q
    ||||||||||| |||| |||||||||||  ||||  |||| | || ||||| ||||| |||||||||||||||||||||||  | ||||||||||||| |    
T  11298948 accaaaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaaaatgcacagcaaaa 11298849  T
Q  230 ggggttcctctagttcttctc 250  Q
    ||||||||||| |||||||||    
T  11298848 ggggttcctctggttcttctc 11298828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 11307312 - 11307192
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg--acaaatgcacagcaaca 229  Q
    ||||||||||| |||| |||||||||||  ||||  |||| | || ||||| ||||| |||||||||||||||||||||||  | ||||||||||||| |    
T  11307312 accaaaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaaaatgcacagcaaaa 11307213  T
Q  230 ggggttcctctagttcttctc 250  Q
    ||||||||||| |||||||||    
T  11307212 ggggttcctctggttcttctc 11307192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 37288389 - 37288458
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||    
T  37288389 ccaaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 37288458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13963384 - 13963182
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||||||| |||||||||| |  | |    
T  13963384 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgcttacaacttcaaaatc-ctca 13963287  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||| ||||||||| || |||   |||||| || ||||||||||||||||||||||||||||  | |    ||||| || ||||||||||| |||||||||    
T  13963286 ttttatcataaaaccccaaaattccaattcctcaccaaaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttac 13963187  T
Q  199 cttag 203  Q
    |||||    
T  13963186 cttag 13963182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 16475360 - 16475265
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||||| || ||||||||||| ||||||| ||||| ||||||    
T  16475360 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctacactactgaagtaaacctcacccttgccttaattcaga 16475265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 15436796 - 15436686
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||| || ||||||||||| ||||||||||||| |||||||||| || ||  |||||| || ||||||||||| ||||||||||||| ||||||| |    
T  15436796 ccaaaattccgaatttctaccataaacctgttaaac-caaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagaagg 15436698  T
Q  213 acaaatgcacag 224  Q
     |||||||||||    
T  15436697 gcaaatgcacag 15436686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 15085175 - 15085087
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacag 224  Q
    ||||||||||||||||||||||||| || | || ||| | || ||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  15085175 aaaacctgttaaactcaaaatcagaattaacat-ctatactactgaagtaaacctcacccttaccttaattcagaaggacaaatgcacag 15085087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 2439776 - 2439876
Alignment:
Q  104 atcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||| |||| ||||||| || ||||||||||||||||  |||||||||| |||||   |||||||  ||||||||||| |||||||||||||    
T  2439776 atcataaaatcccaaattcccaattcctcaccaaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 2439875  T
Q  203 g 203  Q
    |    
T  2439876 g 2439876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 10520727 - 10520838
Alignment:
Q  116 aaaatccccaatttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    ||||||||||||||||||||||| || ||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| ||     
T  10520727 aaaatccccaatttctaccaaaagcttgttaaac-caaaatcagatttcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaa 10520825  T
Q  215 aaatgcacagcaa 227  Q
    |||||||||||||    
T  10520826 aaatgcacagcaa 10520838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 11854644 - 11854533
Alignment:
Q  116 aaaatccccaatttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    ||||||||||||||||||||||| || ||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| ||     
T  11854644 aaaatccccaatttctaccaaaagcttgttaaac-caaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaa 11854546  T
Q  215 aaatgcacagcaa 227  Q
    |||||||||||||    
T  11854545 aaatgcacagcaa 11854533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 15143151 - 15143246
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||| || ||| |||| | || ||||||||||| ||||||||||||| ||||||    
T  15143151 ccaaaatccccaatttctaccataaacccgttaaac-caaaatcagaattaaaaatctatactactgaagtaaacctcacccttaccttatttcaga 15143246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 6412778 - 6412859
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||| |||||||||||||||||||||| |  ||  |||| | |||||||| ||||| ||||||||||||||    
T  6412778 cccaatttctaccaacacctgttaaactcaaaatcagaatacaatatctatactaatgaagcaaacctcacccttaccttag 6412859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 750768 - 750835
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  750768 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 750835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 2387828 - 2387764
Alignment:
Q  134 caaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||||||||||||||||||||||||  ||||| |||||| || ||||||||||| |||||||||    
T  2387828 caaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttac 2387764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 40684008 - 40683941
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  40684008 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 40683941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 48987167 - 48987100
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||| | || ||||||||||| ||||||||||||||    
T  48987167 aaaacctgttaaactcaaa-tcagactttaaaatctatactattgaagtaaacctcacccttaccttag 48987100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 15097166 - 15097075
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  15097166 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagcaa 15097075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 15103542 - 15103451
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  15103542 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagcaa 15103451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15632151 - 15632308
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| || | | || |  | | |||||| || ||||| |||||||||| || ||||||||| |||||||||  |  | ||    
T  15632151 cactccccaaatcagtttacagatacataattacgtgttctatgcaac-agtacctaattctaacatcgaaatcatgcttacaacttcaaattcc-tcat 15632248  T
Q  101 ttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcaga 159  Q
    || ||||||||| || |||  ||||||| || ||||||||||||||||||||||||||||    
T  15632249 tttatcataaaaccccaaaatcccaattcctcaccaaaacctgttaaactcaaaatcaga 15632308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 81446 - 81376
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||||||||||||||| | || |||||| |||| ||||   ||||||||||||||||||||||    
T  81446 cactccccaaatcagtttacagatacgaaataacttgctgtatgcactcagaacctatttctaacatcaaa 81376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 14580783 - 14580674
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||| |||||||||||||| |||| ||||||| ||||||||||| || ||| |||| | || ||||| ||||| ||||||||||||| ||||||       
T  14580783 ccaaaattcccaatttctaccataaacttgttaaa-tcaaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcagatga 14580685  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  14580684 acaaatgcaca 14580674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 23521869 - 23521971
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||||  ||| ||| ||| | ||||||  ||||||||||||||||||||||||||||  ||||   ||||| || ||||||||||| |||||||||    
T  23521869 atttcatcactaaacccataattctcaattttcaccaaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttac 23521968  T
Q  199 ctt 201  Q
    |||    
T  23521969 ctt 23521971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 12454983 - 12455052
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||  ||||  |||| | || ||||||||||| |||||||||||||    
T  12454983 ccaaaacctgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttacctta 12455052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 15839492 - 15839595
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatt-tctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||| ||| ||||||| ||| ||||||| |||||||||||||||||||  || ||| ||||| || ||||||||||| ||||||||    
T  15839492 atttcatcacaaaaaccataattcccaattctct-ccaaaacttgttaaactcaaaatcagaaatt-aatactacactattgaagtaaacctcaccctta 15839589  T
Q  198 ccttag 203  Q
    ||||||    
T  15839590 ccttag 15839595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 35961958 - 35961922
Alignment:
Q  123 ccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  35961958 ccaatttctaccaaaacctgttaaactcaaaatcaga 35961922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 45186387 - 45186482
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||    
T  45186387 ccaaaattcccaatttctaccataaacctgttaaac-caaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 45186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 46175250 - 46175313
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||||  ||||| |||| | || ||||||||||| ||||||||||||||    
T  46175250 ctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttaccttag 46175313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 13020629 - 13020699
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||||  ||||   ||||| || ||||| ||||| ||||||||||||||    
T  13020629 ccaaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttaccttag 13020699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 13026836 - 13026906
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||||  ||||   ||||| || ||||| ||||| ||||||||||||||    
T  13026836 ccaaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttaccttag 13026906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 11219354 - 11219317
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatcaga 159  Q
    |||||||||||| |||||||||||||||||||||||||    
T  11219354 cccaatttctactaaaacctgttaaactcaaaatcaga 11219317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 11898552 - 11898495
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||||||||| |||||| |||||| || ||||||||||| ||||||||    
T  11898552 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcaccctta 11898495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 12462439 - 12462508
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||| |||||||||||||||||||  ||||  |||| | || ||||||||||| |||||||||||||    
T  12462439 ccaaaacttgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttacctta 12462508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 16843154 - 16843049
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||| ||||| |||||   |||||||| ||||||||||||||||||||  ||||  |||| | || ||||| ||||| ||||||||    
T  16843154 atttcatcacaaaacccataatcctcaattctcaccaaaactctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcaccctta 16843055  T
Q  198 ccttag 203  Q
    ||||||    
T  16843054 ccttag 16843049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 49159693 - 49159790
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggttcc 237  Q
    |||||||| |||||||||||  | ||   ||||| || |||| |||||| ||| ||||||||| |||||||||| ||||||||||||| | |||||||    
T  49159693 ctgttaaattcaaaatcagaaatcaataactacactattgaactaaacctcactcttaccttaattcagaatgagaaatgcacagcaaaaagggttcc 49159790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 14168753 - 14168667
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||||| ||||| || ||   ||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  14168753 aaacctgttaaattcaaa-tcagaattcaataactatattactgaagcaaacctcacccttaccttaattcagaaggacaaatgcaca 14168667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 14173000 - 14172914
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||||| ||||| || ||   ||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  14173000 aaacctgttaaattcaaa-tcagaattcaataactatattactgaagcaaacctcacccttaccttaattcagaaggacaaatgcaca 14172914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14168899 - 14168829
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||| ||||||||||| | || ||||||  ||| ||||   ||||||||||||||||||||||    
T  14168899 cactccccaaattagtttacagatacgaaataacttgttgtatgcactcagaacctatttctaacatcaaa 14168829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14173146 - 14173076
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||| ||||||||||| | || ||||||  ||| ||||   ||||||||||||||||||||||    
T  14173146 cactccccaaattagtttacagatacgaaataacttgttgtatgcactcagaacctatttctaacatcaaa 14173076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 81257 - 81212
Alignment:
Q  178 tgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  81257 tgaagcaaacctcacccttaccttaattcagaaggacaaatgcaca 81212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 12429783 - 12429852
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||| | ||||||||||| ||||   |||||| || ||||||||||| ||| ||||||||||||    
T  12429783 aaacctgttataatcaaaatcagaatttagcatctacactattgaagtaaacctcactcttaccttagtt 12429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 12555368 - 12555483
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||  ||||||||| |||||||||||| |||||| |||||| |||||||||| || ||   ||| | || ||||| ||||| ||| ||||||    
T  12555368 ttcatcataaac-ccaaaatcctcaatttctaccataaacctattaaac-caaaatcagaattcaataactatactactgaagcaaacctcactcttacc 12555465  T
Q  200 ttagttcagaatgacaaa 217  Q
    ||| ||||||| ||||||    
T  12555466 ttaattcagaaagacaaa 12555483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 46347965 - 46347896
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||| | || |   |||||| || ||||||||||| ||||||||||||||||    
T  46347965 aaacctgttaaaatcaaaatcaaaattaatcatctacactattgaagtaaacctcacccttaccttagtt 46347896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13026704 - 13026772
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||    |||||||| |||| | ||   ||||||||||||||||||||    
T  13026704 cactccccaaatcagtttacagatatggattaacttgctgtatacactcagaacctatttctaacatca 13026772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 19463600 - 19463672
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttca 207  Q
    |||||||||||||||| || ||||| ||| |  |||| | || ||||||||| ||||||||||||||| ||||    
T  19463600 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 19463672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 22247606 - 22247356
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| |||||| ||| |||    
T  22247606 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacctcaaaa-ctacaat 22247508  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  22247507 tccatcataaaacccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 22247408  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    || |||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  22247407 taattcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 22247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 14881682 - 14881432
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||||| |||||| ||| ||| |||||||||| |||    
T  14881682 cactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaa-ttcatgattacaacatcaaaaactacaat 14881584  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  14881583 ttcatcataaaacccaaaatccccaatttccaccaaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttacct 14881484  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  14881483 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 14881432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 14888359 - 14888109
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||||| |||||| ||| ||| |||||||||| |||    
T  14888359 cactccccaaatcagtttacagatgtaaattaacttcctgtatgcaactggaacctatttctaacatcaa-ttcatgattacaacatcaaaaactacaat 14888261  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  14888260 ttcatcataaaacccaaaatccccaatttccaccaaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttacct 14888161  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  14888160 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 14888109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 38014475 - 38014677
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| |||||| | | |||    
T  38014475 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacatcaaaacccacaat 38014574  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  38014575 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 38014674  T
Q  201 tag 203  Q
    |||    
T  38014675 tag 38014677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 24799750 - 24799548
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||| ||||||||| ||     
T  24799750 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaactccaaaaactacaac 24799651  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| | || |||||||||||||||||||||||    
T  24799650 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcgaaatcagactttaaattctatactattgaagtaaaccccacccttacct 24799551  T
Q  201 tag 203  Q
    |||    
T  24799550 tag 24799548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 14614319 - 14614068
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||| |||||||||||| |||||||||||||||| || |  ||||||||||||||||||||||||| |  ||   |||| ||||| | | |||    
T  14614319 cactccccaaaacagtttacagatacaaattaactttctgtatgtacttagaacctatttctaacatcaaatttacactcccaactccaaaatccacaat 14614220  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  14614219 ttcaacataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaatcccacccttacct 14614120  T
Q  201 tagttcagaatgacaaatgcacagcaacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||||||||||    
T  14614119 tagttcagaatgaaaaatgcacagcaaaaagggttcctctggttcttctctc 14614068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 30781806 - 30782057
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||| ||| |||||||||| ||||||| || | | | |    
T  30781806 cactctccaaatcagtttacagatacaaattaactttctgtatgcacttagaacctatttctaacaccaatttcatgcttacaacttcacaatccacatt 30781905  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||| | |||| |||||| || ||||||||||| |||||||||||    
T  30781906 ttcaacataaaacccaaaatccccaatttc-actaaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttacct 30782004  T
Q  201 tagttcagaatgacaaatgcacagc-aacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||| || |||||||||||| |||||||||||    
T  30782005 tagttcagaatgaaaaatgcacagcaaaaaggggttcctctggttcttctctc 30782057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1111048 - 1110847
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||  ||||||||||||||||||||||||||||||||| ||| ||||||   | |||    
T  1111048 cactccccaaatcagtttacagatgcaaattaattttctgtatacacttagaacctatttctaacatcaaattcatgcttacaacatcaaaactcacaat 1110949  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  1110948 ttcaacataaaacccaaaatccccaatttttaccaaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttacct 1110849  T
Q  201 ta 202  Q
    ||    
T  1110848 ta 1110847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25853655 - 25853882
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  25853655 cactccccaaatcagtttacagatacaaattaactttctgtatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattc-atcat 25853753  T
Q  101 ttcatcat-aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||| |||| ||||  |||||||||   |||||||| ||||||||| |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  25853754 ttcatcataaaaacccaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 25853853  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    |||| |||||||||| |||||||||||||    
T  25853854 cttaattcagaatgaaaaatgcacagcaa 25853882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 17938251 - 17938050
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  17938251 cactccccaaatcagtttacagatgcaaattaactttctgtatgcacttagaacctatttctaacatcaaattcatgcttacaacttc-aaaactacaat 17938153  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| ||||  |||| ||||   |||||||| ||||||||| ||||||||||  | ||   ||| |||| ||||| ||||| ||||||||||    
T  17938152 ttcatcataaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttacc 17938053  T
Q  200 tta 202  Q
    |||    
T  17938052 tta 17938050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 25847074 - 25847301
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||  |||||||||||||||||| ||||||||  |||| |||||||||  | || ||    
T  25847074 cactccccaaatcagtttacagatacaaattaactttttgtatgcacttagaacctatttctaacaccaaattcacacttacaacttcaaattc-atcat 25847172  T
Q  101 ttcatcat-aaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||| |||| ||||  |||||||||   |||||||| ||||||||| |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  25847173 ttcatcataaaaacccaatttccccaattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 25847272  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    |||| |||||||||| |||||||||||||    
T  25847273 cttaattcagaatgaaaaatgcacagcaa 25847301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19799709 - 19799508
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||  ||||||||||||||||||||||| |||  || | |||| ||||| | || ||    
T  19799709 cactccccaaatcagtttacagatgtaaattagctttctgtatgcacttagaacctatttctaacatcaaaatcacactcacaactccaaaatc-atcat 19799611  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||  | ||   |||||  | ||||||||||| |||||||||||    
T  19799610 tccatcataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaaatcaataactacacaattgaagtaaacctcacccttacct 19799511  T
Q  201 tag 203  Q
    |||    
T  19799510 tag 19799508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 33536833 - 33537035
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||  ||||||||||| |||||| |||||||| ||||  |||||||||||||||||||||||||||  || | |||| ||||||  || ||    
T  33536833 cactccccaaattggtttacagatgtaaattagctttctgtatgcacttagaacctatttctaacatcaaattcacactcacaactccaaaaatcatcat 33536932  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    | || ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||  | ||   ||| | || ||||||||||| |||||||||||    
T  33536933 tccaacataaaacccaaaatctccaatttccaccaaaacctgttaaactcaaaatcagaaatcaataactatactattgaagtaaacctcacccttacct 33537032  T
Q  201 tag 203  Q
    |||    
T  33537033 tag 33537035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 40010342 - 40010117
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    ||||||| |||||||||||||||| || |||||| | | | | |||||| |||| ||| ||||||||||||| ||||| ||| |||||||||| |  | |    
T  40010342 cactcccaaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgtttacaacttcaaaagcc-tca 40010245  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||   |||||| || |||||||||||| |||||||||||||||||||||   ||||| || |||||||||||||||||||||    
T  40010244 ttctatcataaaaccccaaaattccaattcctcaccaaaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaaccccacccttac 40010145  T
Q  199 cttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||| |||||||||||||    
T  40010144 cttagttcagaatga-aaatgcacagcaa 40010117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 5455359 - 5455452
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  5455359 ccaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 5455452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19508905 - 19509128
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || || ||| | | | | |||||| |||| ||| ||||||||||||| ||||| ||| |||||| ||  |  | |    
T  19508905 cactccccaaatcagtttacagatacataaataagtgt-tctatgcaaccagaaactaattctaacatcaaaatcatgtttacaacttcgaattcc-tca 19509002  T
Q  100 tttcatcataaaatcc-aaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||  | ||   |||||||| ||||||||||| ||||||||    
T  19509003 ttttatcataaaaccccaaaatctccaatttctcaccaaaacctgttaaactcaaaatcagaaatcaataactacattattgaagtaaacctcaccctta 19509102  T
Q  198 ccttagttcagaatgacaaatgcaca 223  Q
    ||||| |||||||||| |||||||||    
T  19509103 ccttaattcagaatgaaaaatgcaca 19509128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 24008926 - 24009017
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  24008926 aaaacctgttaaactcaaattcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatga-aaatgcacagcaa 24009017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22501716 - 22501942
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||| ||||||||||||  |  |||||| |||| ||||   |||||||||||||||||||||| ||||  ||| |||| ||||| | | | |    
T  22501716 cactccccaaattagtttacagatgtgagataacttactgtatgcactcagaacctatttctaacatcaaaatcatcattacaactccaaaatcaaca-t 22501814  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| ||  ||  |||||||   |||||||| |||||||| ||||| |||||  ||||| |||| | || ||||||||||| ||||||||||    
T  22501815 ttcatcataaaacccctaaatcccaattctcaccaaaactctgttaaattcaaattcagaaattaaagtctatactactgaagtaaacctcacccttacc 22501914  T
Q  200 ttagttcagaatgacaaatgcacagcaa 227  Q
    ||| |||||||||| |||||||||||||    
T  22501915 ttaattcagaatgaaaaatgcacagcaa 22501942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 22508297 - 22508519
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    |||||||||||| ||||||||||||  |  |||||| |||| ||||   |||||||||||||||||||||| ||||  ||| |||| ||||| | | | |    
T  22508297 cactccccaaattagtttacagatgtgagataacttactgtatgcactcagaacctatttctaacatcaaaatcatcattacaactccaaaatcaaca-t 22508395  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| ||  ||  |||||||   |||||||| |||||||| ||||| |||||  ||||| |||| | || ||||||||||| ||||||||||    
T  22508396 ttcatcataaaacccctaaatcccaattctcaccaaaactctgttaaattcaaattcagaaattaaagtctatactactgaagtaaacctcacccttacc 22508495  T
Q  200 ttagttcagaatgacaaatgcaca 223  Q
    ||| |||||||||| |||||||||    
T  22508496 ttaattcagaatgaaaaatgcaca 22508519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 10687018 - 10687108
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| |||||||||||||||||||||| | |||||||||||||    
T  10687018 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaat-aaaaatgcacagcaa 10687108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 5581658 - 5581456
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  5581658 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 5581561  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | |||||| |||||||  |||||||||| |||||   |||||||  ||||||||||| |||||||||    
T  5581560 ttctatcataaaaccccaaattcccaattcctcatcaaaacttgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttac 5581461  T
Q  199 cttag 203  Q
    |||||    
T  5581460 cttag 5581456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 21889506 - 21889601
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||||| || ||||||||||| ||||||||||||| ||||||    
T  21889506 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 21889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15462210 - 15462411
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||| | |||||||||||||  |||||||| |||||||||| | || |    
T  15462210 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacccaattctaacatcaaaaacatgcttacaacttcaaaatc-atca 15462307  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || | ||||||||||||||  |||||||||| |||||   ||||| |  ||||||||||| |||||||||    
T  15462308 ttctatcataaaaccccaaattcccaattcctcatcaaaacctgttaaatacaaaatcagaatttaataactacactcttgaagtaaacctcacccttac 15462407  T
Q  199 ctta 202  Q
    ||||    
T  15462408 ctta 15462411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 23560827 - 23560721
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||  ||||| || ||||| ||||| ||||||||| ||| ||||||| || |    
T  23560827 aaaatccccaattcctaccaaaacttgttaaactcaaaatcagaatttaaaaactacactattgaagcaaacctcacccttacattaattcagaa-gaaa 23560729  T
Q  216 aatgcaca 223  Q
    ||||||||    
T  23560728 aatgcaca 23560721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 7772919 - 7772790
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||| ||| |||| ||| ||||||||||||  |||||||| |||||||||||||||| |||  ||||  |||||  || ||||| ||||| ||||||||    
T  7772919 atttcttcacaaaacccataatccccaattttcaccaaaactctgttaaactcaaaattagaaattaacatctactctactgaagcaaacctcaccctta 7772820  T
Q  198 ccttagttcagaatgacaaatgcacagcaa 227  Q
    ||||| |||||||||| |||||||||||||    
T  7772819 ccttaattcagaatgaaaaatgcacagcaa 7772790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 20341409 - 20341478
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||| |||||||||||||||||| |||||| || ||||||||||| |||||||||||||    
T  20341409 ccaaaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 20341478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 20348013 - 20348082
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||| |||||||||||||||||| |||||| || ||||||||||| |||||||||||||    
T  20348013 ccaaaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 20348082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 11995880 - 11996082
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  11995880 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 11995977  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| || || | ||||| |||| |||||||| ||||||||| |||||||||| || ||   |||||||  ||||||||| ||||||||||    
T  11995978 ttttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaatcccaccctta 11996077  T
Q  198 cctta 202  Q
    |||||    
T  11996078 cctta 11996082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 29745959 - 29745761
Alignment:
Q  5 ccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttca 104  Q
    ||||||||||||||||||||  || ||| ||| |||| ||||   |||||||||||||||||||||| ||||  ||| |||| ||||| | |  ||||||    
T  29745959 ccccaaatcagtttacagatataatttatcttgctgtatgcactcagaacctatttctaacatcaaaatcatcattacaactccaaaatc-aacatttca 29745861  T
Q  105 tcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||| || |||  |||||||   |||||||| || ||||| ||||| |||||  ||||| |||| | || ||||||||||| ||||||||||||||    
T  29745860 tcataaaaccccaaaatcccaattctcaccaaaactctattaaattcaaattcagaaattaaaatctatactactgaagtaaacctcacccttaccttag 29745761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 15193226 - 15193131
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||| || ||  |||||| || ||||||||||| ||||||||||||| ||||||    
T  15193226 ccaaaatccccaattcctaccataaacctgttaaac-caaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcaga 15193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37539325 - 37539123
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||||| |||||||  |||| ||||||||| |||||||||| | || |    
T  37539325 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacctaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 37539228  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| || || | ||||| |||| ||||| || ||||||||| |||||||||| || ||   ||||||   ||||||||| ||||||||||    
T  37539227 ttttatcataaaaacccaatttcccaaattctcaccaacactctgttaaacacaaaatcagaattcaataactacatacttgaagtaaatcccaccctta 37539128  T
Q  198 cctta 202  Q
    |||||    
T  37539127 cctta 37539123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 43029915 - 43029982
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  43029915 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttag 43029982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 18894364 - 18894165
Alignment:
Q  2 actccccaaatcagtttacagatgcaaa-ttaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||| || | |||| | | | | |||||| |||| | | |||||||||||||  |||||||| |||||||||| |  | ||    
T  18894364 actccccaaatcagtttacagatacatacttaagtgt-tctatgcaaccagaaaccaattctaacatcaaaaacatgcttacaacttcaaaatcc-tcat 18894267  T
Q  101 ttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |  | ||||||| || |||| ||||||| || ||||||||||||||||  |||||||||| ||||| | |||||||  || |||||||||||||||||||    
T  18894266 tctaacataaaaccccaaattcccaattcctcaccaaaacctgttaaatacaaaatcagaatttaa-tactacattcttggagtaaaccccacccttacc 18894168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 598138 - 598235
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggttcc 237  Q
    |||||||| |||||||||||  | ||   ||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| | |||||||    
T  598138 ctgttaaattcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgagaaatgcacagcaaaaagggttcc 598235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 428132 - 428243
Alignment:
Q  116 aaaatccccaatttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    |||||| |||||||||||||||| || ||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| ||     
T  428132 aaaatctccaatttctaccaaaagcttgttaaac-caaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaa 428230  T
Q  215 aaatgcacagcaa 227  Q
    |||||||||||||    
T  428231 aaatgcacagcaa 428243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37546869 - 37546667
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||||||| |||||||  |||| ||||||||| |||||||||| | || |    
T  37546869 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaacctaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 37546772  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| |  || | ||||| |||| ||||| || ||||||||| |||||||||| || ||   ||||||   ||||||||| ||||||||||    
T  37546771 ttttatcataaaaactcaatttcccaaattctcaccaacactctgttaaacacaaaatcagaattcaataactacatacttgaagtaaatcccaccctta 37546672  T
Q  198 cctta 202  Q
    |||||    
T  37546671 cctta 37546667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 23081277 - 23081171
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaacct--gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||||||||| ||||||||||||||||||||   ||||||| ||  ||||||||||||||||||  ||||  |||| | || ||||| ||||| |||||||    
T  23081277 atttcatcacaaaatccaaaatccccaattctcaccaaaaactctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcaccctt 23081178  T
Q  197 accttag 203  Q
    |||||||    
T  23081177 accttag 23081171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 18567460 - 18567529
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||  |||||  ||| | || ||||||||||| |||||||||||||    
T  18567460 ccaaaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttacctta 18567529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 10036067 - 10036161
Alignment:
Q  115 caaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaa-gtaaaccccacccttaccttagttcaga 209  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||| ||  ||| |||||||| |||| ||||||| ||||||||||||| ||||||    
T  10036067 caaaatcctcaatttctaccataaacctgttaaac-caaaatcagaattacaat-ctacattactgaaagtaaacctcacccttaccttaattcaga 10036161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 20843978 - 20844084
Alignment:
Q  116 aaaatccccaatttctaccaaaa-cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    |||||| |||||||||||||||| | |||||||| |||||||||| |||||   |||||||| ||||| ||||| ||| ||||||||| ||||||| ||     
T  20843978 aaaatctccaatttctaccaaaagcttgttaaac-caaaatcagaatttaataactacattattgaagcaaacctcactcttaccttaattcagaa-gaa 20844075  T
Q  215 aaatgcaca 223  Q
    |||||||||    
T  20844076 aaatgcaca 20844084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39608242 - 39608174
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||   ||||||||| |||| | ||  |||||||||||||||||||||    
T  39608242 cactccccaaatcagtttacagataagaattaacttgctgtatacacttagaacctatttctaacatca 39608174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 18940453 - 18940383
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||||||||  ||||   ||||| || ||||| ||||| |||||||||||||    
T  18940453 accaaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 18940383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 202
Target Start/End: Complemental strand, 23544099 - 23544029
Alignment:
Q  132 accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||| |||||||||||||||||||| |||| | |||| | || ||||| ||||| |||||||||||||    
T  23544099 accaaaaactgttaaactcaaaatcagaatttagaatctatactactgaagcaaacctcacccttacctta 23544029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 22237106 - 22237017
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    ||||| ||||||| |||||||||| ||||||||| ||||||||| || ||   ||||| || ||||| ||||| |||| |||||||||||    
T  22237106 aaaattcccaattcctaccaaaacttgttaaactgaaaatcagaattgaatagctacactattgaagcaaacctcaccattaccttagtt 22237017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 23443459 - 23443371
Alignment:
Q  114 ccaaaatccccaatttctaccaa-aacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||  |||| | ||  |||| ||||| |||||||||||||    
T  23443459 ccaaaatccccaatttctaccaataacctgttaaa-tcaaaatcagaattcaatatctatactaccgaagcaaacctcacccttacctta 23443371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19801266 - 19801198
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    |||||||||||| ||||||||||||  ||||||||| |||| | ||   ||||||||||||||||||||    
T  19801266 cactccccaaattagtttacagatgtgaattaacttgctgtatacactcagaacctatttctaacatca 19801198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 26651278 - 26651382
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||| |||||||||||   |||||||| ||||||||||||||||||||  ||||   ||| | || ||||||||| | ||||||||    
T  26651278 atttcatcacaaaacccataatccccaattctcaccaaaactctgttaaactcaaaatcagaaattaataactatactattgaagtaaaactcaccctta 26651377  T
Q  198 cctta 202  Q
    |||||    
T  26651378 cctta 26651382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 26922863 - 26922967
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||| |||||||||||   |||||||| ||||||||||||||||||||  ||||   ||| | || ||||||||| | ||||||||    
T  26922863 atttcatcacaaaacccataatccccaattctcaccaaaactctgttaaactcaaaatcagaaattaataactatactattgaagtaaaactcaccctta 26922962  T
Q  198 cctta 202  Q
    |||||    
T  26922963 cctta 26922967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 21830469 - 21830556
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||||||||||| || |    ||||| || ||||| ||| | ||||||||||||| ||||||| ||||||||||||    
T  21830469 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaatctcacccttaccttaattcagaaagacaaatgcaca 21830556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 25420706 - 25420811
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaacct--gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||||||||| |||| ||| |||||||||||   ||||||| ||  ||||||||||||||||||  ||||  |||| | || ||||| ||||| |||||||    
T  25420706 atttcatcacaaaacccataatccccaattctcaccaaaaactctgttaaactcaaaatcagaaattaatgtctatactactgaagcaaacctcaccctt 25420805  T
Q  197 acctta 202  Q
    ||||||    
T  25420806 acctta 25420811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 19799143 - 19799039
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaa-cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||||||||| |||| ||| ||| |||||||   ||||||| |||||||||||||||||||||  ||||  |||| | || ||||| ||||| ||||||||    
T  19799143 atttcatcacaaaacccataattcccaattctcaccaaaaacctgttaaactcaaaatcaga-attaacatctatactactgaagcaaacctcaccctta 19799045  T
Q  198 ccttag 203  Q
    ||||||    
T  19799044 ccttag 19799039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 5337590 - 5337518
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttca 207  Q
    |||||||||||||||| || ||||| ||| |  |||| | || ||||||||| ||||||||||||||| ||||    
T  5337590 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 5337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25420609 - 25420677
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||    |||||||| |||| | ||   ||||||||||||||||||||    
T  25420609 cactccccaaatcagtttacagatatggattaacttgctgtatacactcagaacctatttctaacatca 25420677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 50793 - 51045
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||  ||||||||||||||||||| ||||||||| ||| ||| |||||| | | |||    
T  50793 cactccccaaatcagtttacagatggaaattaactttctgtatacacttagaacctatttctaacattaaattcatgtttacaacatcaaaacccacaat 50892  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  50893 ttcaacataaaacccaaaatccccaatttttacccaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttacct 50992  T
Q  201 tagttcagaatgacaaatgcacagc-aacaggggttcctctagttcttctctc 252  Q
    ||||||||||||| ||||||||||| || |||| ||||||| |||| ||||||    
T  50993 tagttcagaatgaaaaatgcacagcaaaaagggattcctctggttcctctctc 51045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 227
Target Start/End: Original strand, 11 - 189
Alignment:
Q  49 tagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaac 148  Q
    |||||||||||||||||||||||||||  |||| |||||||||  | || ||| |||||||||| ||||||||||||||||  |||||||||||||||||    
T  11 tagaacctatttctaacatcaaattcacacttacaacttcaaattc-atcattccatcataaaacccaaaatccccaattttcaccaaaacctgttaaac 109  T
Q  149 tcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcag-aatgacaaatgcacagcaa 227  Q
    |||||||||||  | ||  |||| | || ||||||||||| |||||||| |||||||||| ||||| |||||||||||||    
T  110 tcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaacttagttcagaaatgaaaaatgcacagcaa 189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 2325 - 2420
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||| || ||  |||||| || ||||||||||  ||||||||||||| ||||||    
T  2325 ccaaaatcctcaatttctaccataaacctgttaaac-caaaatcagaattaaacatctacactactgaagtaaacatcacccttaccttaattcaga 2420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 14198 - 14399
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaa-ttaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| |||| |||| | | | | |||||| |||| | | || |||||||||||||| ||||| |||||||||||    |     
T  14198 cactccccaaatcagtttacagatacaaaattaagtgt-tctatgcaaccagaaaccaattttaacatcaaattcaggcttacaacttcaaaaatcccat 14296  T
Q  100 tttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||||| ||||||| ||||||||||||| ||  || ||||||||||||||||||||||||| |||||  |||||| || ||||||||||||||||||||||    
T  14297 tttcaacataaaacccaaaatccccaaatttcactaaaacctgttaaactcaaaatcagaatttaacatctacactattgaagtaaaccccacccttacc 14396  T
Q  200 tta 202  Q
    |||    
T  14397 tta 14399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 6954 - 6849
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggt 234  Q
    ||||||||||||||||||||| |||||||||| |||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||| |    
T  6954 aaaacctgttaaactcaaaattagactttaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaagggtt 6855  T
Q  235 tcctct 240  Q
    ||||||    
T  6854 tcctct 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 22005 - 21891
Alignment:
Q  110 aaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcag 208  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||  |||||| || ||||||||||| ||||||||||||| |||||    
T  22005 aaatccaaaatccccaatttctaccataaacctgttaaa-tcaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcag 21907  T
Q  209 aatgacaaatgcacag 224  Q
    |   ||||||||||||    
T  21906 atgaacaaatgcacag 21891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 26202 - 26088
Alignment:
Q  110 aaatccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcag 208  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| || ||  |||||| || ||||||||||| ||||||||||||| |||||    
T  26202 aaatccaaaatccccaatttctaccataaacctgttaaa-tcaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcag 26104  T
Q  209 aatgacaaatgcacag 224  Q
    |   ||||||||||||    
T  26103 atgaacaaatgcacag 26088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 3096 - 3274
Alignment:
Q  26 caaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatcccca 125  Q
    |||||||||||||||| ||||  |||||| ||||||||||| ||||||||  |||| |||||||||  | || |||||||||||||| || || | | ||    
T  3096 caaattaactttctgtatgcacttagaacttatttctaacaccaaattcacacttacaacttcaaattc-atcatttcatcataaaaacccaatttcaca 3194  T
Q  126 atttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    | |||| |||||||| ||||||||| |||||||||| |||||   |||||||  ||||||||||| ||||||||||||||    
T  3195 aattctcaccaaaactctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttag 3274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 390 - 162
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |    | |||||||||||||||||||| | ||  ||| |||| ||||| | | | |    
T  390 cactccccaaatcagtttacagatgtaaattaacttgctgtatactctcataacctatttctaacatcaaaattatcattacaactccaaaatcaaca-t 292  T
Q  101 ttcatcataaaatccaaaatccccaattt-ctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||||||| ||| |||||||||||| | || ||||| |||||||   ||||||||||  ||||   ||||| || | ||||||||| |||||||||    
T  291 ttcatcataaaacccataatccccaattttcaacaaaaactctgttaactccaaaatcagaaattaataactacactattaaagtaaacctcacccttac 192  T
Q  199 cttagttcag-aatgacaaatgcacagcaa 227  Q
    |||| ||||| ||||| |||||||||||||    
T  191 cttaattcagaaatgaaaaatgcacagcaa 162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 17655 - 17568
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||||  ||||||||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||| || |||||||||    
T  17655 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttaattcagaa-gaaaaatgcaca 17568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 59681 - 59586
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||||| || ||||||||||| ||||||||||||| ||||||    
T  59681 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 59586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 61244 - 61150
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||||| |||||||||||| |||| |||||||| |||||||| | || ||| |||||| || ||||||||||| || |||||||||| ||||||    
T  61244 ccaaaatcctcaatttctaccataaacttgttaaac-caaaatcataattaaaaatctacactactgaagtaaacctca-ccttaccttaattcaga 61150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 8189 - 8276
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || | | |||| | |||||||| ||||| ||||||||||||||    
T  8189 aaaatccccaatttctatcaaaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttaccttag 8276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 322006 - 322093
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||| |||||||||||||||||||||||||||||||||||||| || ||  |||| | |||||||| ||||| ||||||||||||||    
T  322006 aaaattcccaatttctaccaaaacctgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttaccttag 322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 327694 - 327777
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| |||||  |||| | |||||||| ||||| ||||||||||    
T  327694 aaaattcccaatttctaccaaaacctattaaactcaaaatcagaatttaatatctatactaatgaagcaaacctcacccttacc 327777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 8504 - 8395
Alignment:
Q  114 ccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatga 213  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||| ||    
T  8504 ccaaaatccccaatttctaccataacttgttaaac-caaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaagga 8406  T
Q  214 caaatgcacag 224  Q
    |||||||||||    
T  8405 caaatgcacag 8395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 14590 - 14389
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||| ||||||||||| ||||||||||  ||| | ||   |||||||||||||||||||||| ||||  ||| |||| ||||| | |  ||    
T  14590 cactccccaaatcggtttacagatgtaaattaacttgttgtatccactcagaacctatttctaacatcaaaatcatcattacaactccaaaatc-aacat 14492  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||||||||||| || |||  |||||||   |||||||| |||||||| ||||| |||||  ||||| |||| | || ||||||||||  ||||||||||    
T  14491 ttcatcataaaaccccaaaatcccaattctcaccaaaactctgttaaattcaaattcagaaattaaaatctatactactgaagtaaacttcacccttacc 14392  T
Q  200 tta 202  Q
    |||    
T  14391 tta 14389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 32361 - 32589
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |    |||| ||||||||||||||||| | ||  ||| ||| || ||||  |  ||    
T  32361 cactccccaaatcagtttacagatgtaaattaacttgctgtatactctcagaatctatttctaacatcaaaattatcattacaac-tctaaaatcaacat 32459  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaa--cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    |||||||||||| ||| ||||||||||||  |||||||   ||||| |   ||||||||||  ||||   ||||| || ||||||||||| |||||||||    
T  32460 ttcatcataaaacccataatccccaattttcaccaaaaactctgtttactccaaaatcagaaattaataactacactattgaagtaaacctcacccttac 32559  T
Q  199 cttagttcag-aatgacaaatgcacagcaa 227  Q
    |||| ||||| ||||| |||||||||||||    
T  32560 cttaattcagaaatgaaaaatgcacagcaa 32589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 946 - 1050
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||||||| |||| ||| |||||||||||   ||||||||||||||||||||||||||||  ||||  |||||| || ||||| ||||| |||||||||    
T  946 atttcatcacaaaacccataatccccaattctcaccaaaacctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttac 1045  T
Q  199 cttag 203  Q
    |||||    
T  1046 cttag 1050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 50932 - 50849
Alignment:
Q  120 tccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||| || |||||||||| ||||||||||||||||||| || | | |||| | ||||| || ||||| ||||||||||||||    
T  50932 tccccacttcctaccaaaacttgttaaactcaaaatcagaattcagaatctatactaatgcagcaaaccgcacccttaccttag 50849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 849 - 917
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||   ||||||||| |||  | ||   ||||||||||||||||||||    
T  849 cactccccaaatcagtttacagatatgaattaacttgctgcatacactcagaacctatttctaacatca 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 766 - 877
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||||||||||| |||||||||| |||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| || |    
T  766 aaaatccccaattcctaccaaaacttgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggaaa 865  T
Q  216 aatgcacagcaa 227  Q
    ||||||||||||    
T  866 aatgcacagcaa 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 16863 - 17085
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  || ||||||| |||| | ||   ||||||||||||||||||||||   |   ||   ||| ||||  | || ||    
T  16863 cactccccaaatcagtttacagatataagttaacttgctgtatacactcagaacctatttctaacatcaaaacaacaattcctactccaaattc-atcat 16961  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    ||| ||| |||| ||| ||||||||||||  |||||||| |||||||||||||||| |||  ||||  |||||  || ||||| ||||| ||||||||||    
T  16962 ttcttcacaaaacccataatccccaattttcaccaaaactctgttaaactcaaaattagaaattaacatctactctactgaagcaaacctcacccttacc 17061  T
Q  200 ttagttcagaatgacaaatgcaca 223  Q
    ||| |||||||||| |||||||||    
T  17062 ttaattcagaatgaaaaatgcaca 17085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 227
Target Start/End: Original strand, 28189 - 28303
Alignment:
Q  114 ccaaaatccccaatttctaccaa-aacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||||||||||||||||||| |||||||||||   ||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| |    
T  28189 ccaaaatccccaatttctaccaataacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaagg 28288  T
Q  213 acaaatgcacagcaa 227  Q
    |||||||||||||||    
T  28289 acaaatgcacagcaa 28303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 2234 - 2340
Alignment:
Q  117 aaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaa 216  Q
    |||||||||||| |||| || || |||||||| |||||||||| || ||  |||||| || ||||||||||  ||||||||||||| ||||||| |||||    
T  2234 aaatccccaattcctactaagacttgttaaacccaaaatcagaattaaatatctacactactgaagtaaacatcacccttaccttaattcagaaggacaa 2333  T
Q  217 atgcaca 223  Q
    |||||||    
T  2334 atgcaca 2340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2119 - 2187
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaat-taactttctgtgtgcaactagaacctatttctaacatca 69  Q
    |||||||||||| ||||||||||||||||  ||| | | ||| ||||||||||||||| |||||||||||    
T  2119 cactccccaaattagtttacagatgcaaaactaagtgt-tgtatgcaactagaacctaattctaacatca 2187  T

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Target: scaffold0191 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 10674 - 10743
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||||||||||||||||||||||| |||||| |||| | || ||||||||||| |||||||||||||    
T  10674 ccaaaacctgttaaactcaaaatcagaatttaaaatctatactactgaagtaaacctcacccttacctta 10743  T

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Target: scaffold0102 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 11504 - 11427
Alignment:
Q  169 ctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaacaggggttcctctagttct 246  Q
    ||||| || ||||||||||| ||||||||||||| |||||||||| ||||||||||||| | |||||||||| |||||    
T  11504 ctacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaagggttcctctggttct 11427  T

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Target: scaffold0102; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 30780 - 30867
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||  ||||||||||||| ||||||| ||||||||||||    
T  30780 aaacctgttaaacccaaaatcagaattcaatatctatactactgaagcaaacttcacccttaccttaattcagaaagacaaatgcaca 30867  T

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Target: scaffold0457 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 11596 - 11394
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    |||||||||||||||||||||||| || |||||| | | | | |||||| |||| | | || ||||||||||  |||||||| |||||||||| |  | |    
T  11596 cactccccaaatcagtttacagatacataattaagtgt-tctatgcaaccagaaaccaattataacatcaaaaacatgcttacaacttcaaaatcc-tca 11499  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||  ||||||||| || |||| ||||||| || ||||||||||||||||  |||||||||| || ||   |||||||  ||||||||||| |||||||||    
T  11498 ttctatcataaaaccccaaattcccaattcctcaccaaaacctgttaaatacaaaatcagaattcaataactacattcttgaagtaaacctcacccttac 11399  T
Q  199 cttag 203  Q
    |||||    
T  11398 cttag 11394  T

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Target: scaffold0193 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 2161 - 2058
Alignment:
Q  114 ccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatga 213  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||| ||    
T  2161 ccaaaatccccaatttctaccataacttgttaaac-caaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaagga 2063  T
Q  214 caaat 218  Q
    |||||    
T  2062 caaat 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 17760 - 17693
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  17760 aaaacctgttaaactcaaa-tcagactttaaaatctacactattgaagtaaacctcacccttaccttag 17693  T

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Target: scaffold0097 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 28795 - 28874
Alignment:
Q  127 tttctaccaaaacctgttaaactc-aaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||||||||||||||| ||||||||| |||| | |||||| |||||||| ||||| |||| |||||||||||    
T  28795 tttctaccaaaacctgttaaactcaaaaatcagaatttagaatctacactaatgaagcaaacctcaccattaccttagtt 28874  T

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Target: scaffold0402 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 15875 - 15984
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||       
T  15875 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcagatga 15973  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  15974 acaaatgcaca 15984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 13758 - 13867
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||| || ||  |||||| || ||||| ||||| ||||||||||||| ||||||       
T  13758 ccaaaatccctaatttctaccataaacctgttaaa-tcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaattcagacga 13856  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  13857 acaaatgcaca 13867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 1346 - 1456
Alignment:
Q  116 aaaatccccaatttctaccaaaa-cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    ||||||||||||||||||||||| | |||||||| |||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| ||     
T  1346 aaaatccccaatttctaccaaaagcttgttaaac-caaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaagga- 1443  T
Q  215 aaatgcacagcaa 227  Q
    |||||||||||||    
T  1444 aaatgcacagcaa 1456  T

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Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 2060 - 2262
Alignment:
Q  1 cactccccaaatcagtttacagatgca-aattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataa 99  Q
    ||||||||||||||||||||||||||| || ||| | | | | |||||| |||| ||| |||||||  |||| ||||||||| |||||||||| | || |    
T  2060 cactccccaaatcagtttacagatgcataactaagtgt-tctatgcaaccagaaactaattctaaccccaaaatcatgcttacaacttcaaaatc-atca 2157  T
Q  100 tttcatcataaaatccaaaatccccaatttct-accaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctta 197  Q
    ||| ||||||||| || || | ||||| |||| |||||||| ||||||||| ||||||||||  | ||   ||| |||| ||||| ||||| ||||||||    
T  2158 ttttatcataaaaacccaatttcccaaattctcaccaaaactctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcaccctta 2257  T
Q  198 cctta 202  Q
    |||||    
T  2258 cctta 2262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 3291 - 3181
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||||| |||||||| ||| ||||||||||||| |||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||| |    
T  3291 ccaaaatcctcaatttcttccataaacctgttaaac-caaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaagg 3193  T
Q  213 acaaatgcacag 224  Q
    ||||||||||||    
T  3192 acaaatgcacag 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 9398 - 9500
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||||||| ||||||||||||||||||| |   |  |||| | || ||||| ||||| ||||||||||||| ||||||| || |||||||||    
T  9398 caatttctaccaaaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacccttaccttaattcagaa-gaaaaatgcaca 9496  T
Q  224 gcaa 227  Q
    ||||    
T  9497 gcaa 9500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 47066 - 46975
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacagcaa 227  Q
    |||||||||||| ||||||||||| || |    ||| |||| ||||| ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  47066 aaacctgttaaaatcaaaatcagaattcagcaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcacagcaa 46975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 1475 - 1585
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||| |  ||  |||| | || ||||| ||||| ||||||||||||| ||||||| || |    
T  1475 aaaattcccaattcctaccaaaacttgttaaactcagaatcagaatcaaacatctatactactgaagcaaacctcacccttaccttaattcagaa-gaaa 1573  T
Q  216 aatgcacagcaa 227  Q
    ||||||||||||    
T  1574 aatgcacagcaa 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 11342 - 11462
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||||||||||  || |||||||||||| |||||||||| |||||||| |||||||||| || |    | ||| || ||||| ||||| |||||||||||    
T  11342 ttcatcataaa--cctaaatccccaattcctaccaaaacttgttaaacccaaaatcagaattcattaaccacactattgaagcaaacctcacccttacct 11439  T
Q  201 tagttcagaatgacaaatgcaca 223  Q
    ||  | ||||||| |||||||||    
T  11440 taagttagaatgaaaaatgcaca 11462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11241 - 11309
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaat-taactttctgtgtgcaactagaacctatttctaacatca 69  Q
    |||||||||||| ||||||||||||||||  ||| | | ||| ||||||||||||||| |||||||||||    
T  11241 cactccccaaattagtttacagatgcaaaactaagtgt-tgtatgcaactagaacctaattctaacatca 11309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 171047 - 170960
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| || ||   ||| | || ||||| ||||| ||||||||||||||    
T  171047 aaaattcccaatttctaccaaaacctgttaaactcaaaattagaattcaataactatactactgaagcaaacctcacccttaccttag 170960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 4618 - 4509
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||| || ||| || | | || ||||| ||||| ||||||||||||| ||||||       
T  4618 ccaaaatccccaatttctaccataaacatgttaaa-tcaaaatcagaattaaaaatcgatactactgaagcaaacctcacccttaccttaattcagatga 4520  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  4519 acaaatgcaca 4509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 19800 - 19691
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||| || ||| || | | || ||||| ||||| ||||||||||||| ||||||       
T  19800 ccaaaatccccaatttctaccataaacatgttaaa-tcaaaatcagaattaaaaatcgatactactgaagcaaacctcacccttaccttaattcagatga 19702  T
Q  213 acaaatgcaca 223  Q
    |||||||||||    
T  19701 acaaatgcaca 19691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1685 - 1755
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    ||||||||||||||||||||||||| || ||||||| |||| | ||   ||||||||||||||||||||||    
T  1685 cactccccaaatcagtttacagatgtaatttaacttgctgtatacactcagaacctatttctaacatcaaa 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 137963 - 138068
Alignment:
Q  99 atttcatcataaaatccaaaatccccaatttctaccaaaacct--gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccaccctt 196  Q
    ||||||||| |||| |||||||||||||||   ||||||| ||  ||||||||||||||||||  ||||  |||||| || ||||| ||||| |||||||    
T  137963 atttcatcacaaaacccaaaatccccaattctcaccaaaaactctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcaccctt 138062  T
Q  197 acctta 202  Q
    ||||||    
T  138063 acctta 138068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 137866 - 137934
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||   ||||||||| |||| | ||   |||||||||||||| |||||    
T  137866 cactccccaaatcagtttacagatatgaattaacttgctgtatacactcagaacctatttctatcatca 137934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 511823 - 511754
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||||  |||||  ||| | || ||||||||||| |||||||||||||    
T  511823 ccaaaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttacctta 511754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 448896 - 448789
Alignment:
Q  114 ccaaaatccccaatttctaccaa-aacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| || ||  ||||   || ||||| ||||| ||||||||||| | ||||||| |    
T  448896 ccaaaattcccaatttctaccaataacctgttaaa-tcaaaatcagaattcaatatctattctactgaagcaaacctcacccttacctaaattcagaagg 448798  T
Q  213 acaaatgca 221  Q
    |||||||||    
T  448797 acaaatgca 448789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 496 - 401
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||    
T  496 ccaaaattcccaatttctaccataaacctgttaaac-caaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 401  T

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Target: scaffold0924 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 3190 - 3297
Alignment:
Q  114 ccaaaatccccaatttctaccaa-aacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| || ||  ||||   || ||||| ||||| ||||||||||| | ||||||| |    
T  3190 ccaaaattcccaatttctaccaataacctgttaaa-tcaaaatcagaattcaatatctattctactgaagcaaacctcacccttacctcaattcagaacg 3288  T
Q  213 acaaatgca 221  Q
    |||||||||    
T  3289 acaaatgca 3297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 14579 - 14646
Alignment:
Q  141 tgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||| |||||||||| |||||| |||| |||| ||||||||||| ||||||||||||| ||||||    
T  14579 tgttaaac-caaaatcagaatttaaaatctatattactgaagtaaacctcacccttaccttaattcaga 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 770 - 837
Alignment:
Q  141 tgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    |||||||| |||||||||| |||||| |||| | || ||||||| ||| ||||||||||||| ||||||    
T  770 tgttaaac-caaaatcagaatttaaaatctatactactgaagtatacctcacccttaccttaattcaga 837  T

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Target: scaffold0556 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 4211 - 4124
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||||||||||| ||| |   ||| |||| ||||| ||||| |||| |||||||| ||||||| ||||||||||||    
T  4211 aaacctgttaaaatcaaaatcagaatttcacaactatattactgaagcaaacctcaccattaccttaattcagaaagacaaatgcaca 4124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 9167 - 9246
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||| ||||||||||||||||||||||||||||||| || | | || | |  | ||||||||||| ||||||||||||||    
T  9167 caatctctaccaaaacctgttaaactcaaaatcagaattcagaatcaatacaattgaagtaaacctcacccttaccttag 9246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 11880 - 12082
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||||||||||||||  || ||||||| |||| | ||   |||||| ||||||||||||||| |||  || | |||||||||  | | ||     
T  11880 cactccccaaatcagtttacagatataagttaacttgctgtatacactcagaacccatttctaacatcaaaatcacactcacaacttcaaatccaacaa- 11978  T
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacc 199  Q
    |||| |||||||||| |||  |||||||   || | ||| |||||||| |||||||||||  | ||   ||||| || ||||||||||| ||||||||||    
T  11979 ttcaacataaaatcccaaaatcccaattctcactacaactctgttaaattcaaaatcagaaatcaataactacactattgaagtaaacctcacccttacc 12078  T
Q  200 ttag 203  Q
    ||||    
T  12079 ttag 12082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 578 - 468
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||| ||  |  |||| | || ||||| ||||| ||||||||||||| ||||||       
T  578 ccaaaatccccaattcctaccataaacctgttaaac-caaaatcagaattagacatctatactactgaagcaaacctcacccttaccttaattcagacga 480  T
Q  213 acaaatgcacag 224  Q
    ||||||||||||    
T  479 acaaatgcacag 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 701 - 631
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||| ||||||||||| |||| |||||| |||| ||||   ||||| ||||||||||||||||    
T  701 cactccccaaattagtttacagatacaaaataacttactgtatgcactcagaacgtatttctaacatcaaa 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 4161 - 4259
Alignment:
Q  124 caatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||| |||||||||| ||||||||| ||||||||| || ||   ||||| || ||||| ||||| ||||||||||||| ||||||| || |||||||||    
T  4161 caattcctaccaaaacttgttaaacttaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaa-gaaaaatgcaca 4259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 11321 - 11388
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||| ||||||||||| || ||| |||||| || ||| ||||||| ||||||||||||||    
T  11321 aaacctgttaaaatcaaaatcagaattaaaaatctacactattgatgtaaacctcacccttaccttag 11388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 26530 - 26639
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    ||||| ||||||| |||||||||| ||||||||  ||||||||| || ||   ||||| || ||||| |||||| |||||||||||| ||||||| || |    
T  26530 aaaattcccaattcctaccaaaacttgttaaacctaaaatcagaattcaataactacactattgaagcaaaccc-acccttaccttaattcagaa-gaaa 26627  T
Q  216 aatgcacagcaa 227  Q
    ||||||||||||    
T  26628 aatgcacagcaa 26639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 25605 - 25471
Alignment:
Q  68 caaattcatgcttataacttcaaaaactataatttcatcataaaatccaaaatccccaatttct-accaaaacctgttaaactcaaaatcagactttaaa 166  Q
    |||| ||||||||| |||||||||| | || |||| | ||||||| || |||| | ||||| || ||||||||||||||||||||||||||||  | |      
T  25605 caaaatcatgcttacaacttcaaaatc-atcattttaacataaaaccccaaattctcaattcctcaccaaaacctgttaaactcaaaatcagaaatcagt 25507  T
Q  167 ttctacattaatgaagtaaaccccacccttacctta 202  Q
      |||||||| ||||||||||| |||| ||||||||    
T  25506 aactacattattgaagtaaacctcaccattacctta 25471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 16672 - 16561
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    |||||||| |||| |||||||||| ||||||||||||||||||| |   |  |||| | || ||||| ||||| ||| ||||||||| |||||||  | |    
T  16672 aaaatccctaattcctaccaaaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacacttaccttaattcagaagaaaa 16573  T
Q  216 aatgcacagcaa 227  Q
    ||||||||||||    
T  16572 aatgcacagcaa 16561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 2581 - 2511
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    ||||||||||||| ||||||||||| || | | ||||||  | ||||||||||| ||||||||||||||||    
T  2581 aaaacctgttaaaatcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttaccttagtt 2511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 56001 - 55891
Alignment:
Q  117 aaatccccaatttctaccaa-aacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgaca 215  Q
    |||| ||||||||||| ||| ||| ||||||| ||||||||||| || ||   ||| | || ||||| ||||| ||||||||||||| ||||||  ||||    
T  56001 aaattcccaatttctaacaataacttgttaaaatcaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatagaca 55902  T
Q  216 aatgcacagca 226  Q
    |||||||||||    
T  55901 aatgcacagca 55891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 252795 - 252864
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  252795 aaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaacctcacccttaccttagtt 252864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 259401 - 259470
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  259401 aaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaacctcacccttaccttagtt 259470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 155103 - 155191
Alignment:
Q  136 aaacctgttaaactca-aaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    |||||||||||| ||| |||||||| || |   |||||| || ||||||||||| |||||||||||||  |||||| ||||||||||||    
T  155103 aaacctgttaaaatcagaaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaaatcagaaagacaaatgcaca 155191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 187041 - 186972
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| ||||    ||||| || ||||||||||| |||| |||||||||||    
T  187041 aaacctgttaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcaccattaccttagtt 186972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 2869 - 2828
Alignment:
Q  116 aaaatccccaatttctaccaaaacctgttaaactcaaaatca 157  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  2869 aaaatccccaattcctaccaaaacttgttaaactcaaaatca 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 26840 - 26909
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| ||||||||||||||||    
T  26840 aaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaacctcacccttaccttagtt 26909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 8085 - 8154
Alignment:
Q  133 ccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    ||||||| |||||||||||||||||||  |||||  ||| | || ||||||||||| |||||||||||||    
T  8085 ccaaaacatgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttacctta 8154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 105077 - 105142
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaaca 66  Q
    |||||||||||| |||||||||||| ||||| |||| |||||| ||  ||||| ||||||||||||    
T  105077 cactccccaaattagtttacagatgtaaattgacttgctgtgtacatttagaaactatttctaaca 105142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 105216 - 105283
Alignment:
Q  140 ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttca 207  Q
    |||||||||||||||||| |  ||||| |||| | || ||||||||||| ||||||||||||| ||||    
T  105216 ctgttaaactcaaaatcaaaaattaaaatctatactactgaagtaaacctcacccttaccttaattca 105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 371348 - 371417
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||| ||||||| ||||||||||| ||||    |||||||| ||||||||||| ||||||||||||||||    
T  371348 aaacttgttaaaatcaaaatcagaatttatcaactacattattgaagtaaacctcacccttaccttagtt 371417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 177 - 244
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    ||||||||||||||||||| | |||||||||| |||| | || ||||||||||| |||||||| |||||    
T  177 aaaacctgttaaactcaaa-taagactttaaaatctaaactattgaagtaaacctcacccttaacttag 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 3414 - 3330
Alignment:
Q  139 cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcaca 223  Q
    ||||||||| ||||||||||| || ||   ||| |||| ||||| ||||| ||||||||||||| ||| ||| ||||||||||||    
T  3414 cctgttaaaatcaaaatcagaattcaacaactatattactgaagaaaacctcacccttaccttaattctgaaagacaaatgcaca 3330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 7111 - 7199
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaaatgcacag 224  Q
    ||||||||||||| |||||||||| |  ||   ||| | || ||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  7111 aaacctgttaaacccaaaatcagaatccaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacag 7199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 15904 - 16105
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaattcatgcttataacttcaaaaactataat 100  Q
    ||||||||||||  ||||| |||||  ||||||| | |||| |||    ||||||||||| |||||||||| ||||  ||  |||| ||||| | || ||    
T  15904 cactccccaaattggtttatagatgtgaattaacctactgtatgctctcagaacctatttttaacatcaaaatcatcattccaactccaaaatc-atcat 16002  T
Q  101 ttcatcataaaat-ccaaaatccccaatttctaccaaaac-ctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttac 198  Q
    ||||||||||||  |||||||||| | |  || ||||||| |||||||||||||| |||||  |||||| ||| | || ||||||||||| |||||||||    
T  16003 ttcatcataaaacaccaaaatcccaattcact-ccaaaactctgttaaactcaaattcagaaattaaat-ctatactactgaagtaaacctcacccttac 16100  T
Q  199 cttag 203  Q
    |||||    
T  16101 cttag 16105  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 2192 - 2097
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcaga 209  Q
    ||||||||||||||| ||| || ||||||||||||| |||||||||| || ||  |||| | || ||||| ||||| ||||||||||||| ||||||    
T  2192 ccaaaatccccaatt-ctatcataaacctgttaaacccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcaga 2097  T

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Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2315 - 2245
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||| |||||||||||  |||   | || |||| |||||| ||||||||||||||||||||||    
T  2315 cactccccaaattagtttacagatataaaactaattgctgtatgcaaccagaacctatttctaacatcaaa 2245  T

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Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 43356 - 43252
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||  ||||||| |||||||   || ||||||||||||| | ||||||||| ||||    ||||| || ||||||||||| |||||||||||    
T  43356 ttcaacataaaccccaaaattcccaattctcacaaaaacctgttaaaataaaaatcagaatttatcaactacactattgaagtaaacctcacccttacct 43257  T
Q  201 tagtt 205  Q
    |||||    
T  43256 tagtt 43252  T

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Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 48422 - 48318
Alignment:
Q  101 ttcatcataaaatccaaaatccccaatttctaccaaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacct 200  Q
    |||| ||||||  ||||||| |||||||   || ||||||||||||| | ||||||||| ||||    ||||| || ||||||||||| |||||||||||    
T  48422 ttcaacataaaccccaaaattcccaattctcacaaaaacctgttaaaataaaaatcagaatttatcaactacactattgaagtaaacctcacccttacct 48323  T
Q  201 tagtt 205  Q
    |||||    
T  48322 tagtt 48318  T

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Target: scaffold1853 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 79 - 5
Alignment:
Q  114 ccaaaatccccaatttctacca-aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaacc 188  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||| | || ||||| |||||    
T  79 ccaaaatccccaatttctaccataaacctgttaaac-caaaatcagaattaaaaatctatactactgaagcaaacc 5  T

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Target: scaffold0149 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 14187 - 14077
Alignment:
Q  114 ccaaaatccccaatttctaccaaaa-cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatg 212  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  || || ||  |||| | || ||||| ||||| ||||||||||||| | ||||       
T  14187 ccaaaatccccaatttctaccaaaatcctgttaaa-tcaaaataggaattcaacatctatactactgaagaaaacctcacccttaccttaatccagatga 14089  T
Q  213 acaaatgcacag 224  Q
    ||||||||||||    
T  14088 acaaatgcacag 14077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 157
Target Start/End: Original strand, 21118 - 21153
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatca 157  Q
    |||||||||||||||||||||||||| |||||||||    
T  21118 cccaatttctaccaaaacctgttaaattcaaaatca 21153  T

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Target: scaffold0072 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 157
Target Start/End: Original strand, 56809 - 56844
Alignment:
Q  122 cccaatttctaccaaaacctgttaaactcaaaatca 157  Q
    ||||| ||||||||||||||||||||||||||||||    
T  56809 cccaaattctaccaaaacctgttaaactcaaaatca 56844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 254446 - 254513
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||||||||||||||||  ||||  |||| | || ||||| ||||| |||||||||||||    
T  254446 aaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 254513  T

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Target: scaffold0331 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 19441 - 19546
Alignment:
Q  118 aatccccaatttctaccaaaa-cctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgacaa 216  Q
    ||||||||||||||||||||| | |||||||| |||||||||| |||||   ||||| || ||||| |||||  ||||||||||||  |||||   ||||    
T  19441 aatccccaatttctaccaaaagcttgttaaac-caaaatcagaatttaataactacactattgaagcaaacctgacccttaccttaaatcagatgaacaa 19539  T
Q  217 atgcaca 223  Q
    |||||||    
T  19540 atgcaca 19546  T

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Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 45975 - 45909
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| |||||||||||||    
T  45975 aaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaacctcacccttacctta 45909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 50248 - 50182
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttacctta 202  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| |||||||||||||    
T  50248 aaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaacctcacccttacctta 50182  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 77546 - 77616
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatcaaa 71  Q
    |||||||||||| |||||| |||| | || ||||||  ||| |||| | ||||||||||||||||||||||    
T  77546 cactccccaaattagtttatagatacgaaataacttgttgtatgcacccagaacctatttctaacatcaaa 77616  T

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Target: scaffold0192 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 7553 - 7622
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||||||| || |   |||||| || ||||||||||| |||||||||| |||||    
T  7553 aaacctgttaaaatcaaaatcagaattaagcatctacactattgaagtaaacctcacccttaccgtagtt 7622  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 13376 - 13420
Alignment:
Q  115 caaaatccccaatttctacca-aaacctgttaaactcaaaatcaga 159  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||    
T  13376 caaaatccccaatttctaccataaacctgttaaa-tcaaaatcaga 13420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 7890 - 7959
Alignment:
Q  136 aaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagtt 205  Q
    |||||||||||| ||||||| ||| ||||    ||||| || ||||||||||| ||||||||||||||||    
T  7890 aaacctgttaaaatcaaaataagaatttatcaactacactattgaagtaaaccacacccttaccttagtt 7959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 3009 - 2965
Alignment:
Q  115 caaaatccccaatttctacca-aaacctgttaaactcaaaatcaga 159  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  3009 caaaatccccaatttctaccataaacctgttaaac-caaaatcaga 2965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2795 - 2859
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaac 65  Q
    |||||||||||| ||||||||||||  ||||||||| || | ||||   ||||||||||||||||    
T  2795 cactccccaaattagtttacagatgtgaattaacttgctatatgcattcagaacctatttctaac 2859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31613 - 31681
Alignment:
Q  1 cactccccaaatcagtttacagatgcaaattaactttctgtgtgcaactagaacctatttctaacatca 69  Q
    ||||||||||||||||||||||||   |||||| || |||| | ||   ||||||||||||||||||||    
T  31613 cactccccaaatcagtttacagatatgaattaagttgctgtatacactcagaacctatttctaacatca 31681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 3816 - 3927
Alignment:
Q  116 aaaatccccaatttctaccaaaacct-gttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttagttcagaatgac 214  Q
    |||| ||| |||||||||||||| || ||||| | |||||||||| || ||   ||||| || ||||| ||||| |||| |||||||| ||||||| ||     
T  3816 aaaacccctaatttctaccaaaagcttgttaagc-caaaatcagaattaaataactacactattgaagcaaacctcaccattaccttaattcagaaggaa 3914  T
Q  215 aaatgcacagcaa 227  Q
    |||||||||||||    
T  3915 aaatgcacagcaa 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 100901 - 100834
Alignment:
Q  135 aaaacctgttaaactcaaaatcagactttaaattctacattaatgaagtaaaccccacccttaccttag 203  Q
    |||||||||||||||||||||||||  ||||  |||| | || ||||||||||| || |||||||||||    
T  100901 aaaacctgttaaactcaaaatcaga-attaacatctatactactgaagtaaacctcatccttaccttag 100834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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