View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9857_low_56 (Length: 238)

Name: NF9857_low_56
Description: NF9857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9857_low_56
NF9857_low_56
[»] chr2 (53 HSPs)
chr2 (1-238)||(40332090-40332327)
chr2 (1-238)||(31967904-31968140)
chr2 (1-238)||(28550779-28551015)
chr2 (1-238)||(1586893-1587130)
chr2 (1-197)||(22776190-22776385)
chr2 (1-197)||(22781568-22781763)
chr2 (1-233)||(22785521-22785752)
chr2 (1-238)||(44840437-44840670)
chr2 (5-238)||(3277037-3277270)
chr2 (10-136)||(14581527-14581653)
chr2 (1-233)||(33074229-33074470)
chr2 (3-233)||(34321792-34322031)
chr2 (3-197)||(23392569-23392763)
chr2 (1-233)||(31327821-31328063)
chr2 (1-233)||(31334542-31334784)
chr2 (16-238)||(20151885-20152117)
chr2 (5-203)||(28701115-28701322)
chr2 (1-203)||(28711584-28711795)
chr2 (1-197)||(22802463-22802668)
chr2 (1-235)||(31800741-31800984)
chr2 (4-233)||(35743858-35744094)
chr2 (3-233)||(30557175-30557416)
chr2 (1-238)||(6392636-6392884)
chr2 (1-238)||(6573973-6574221)
chr2 (16-202)||(45087069-45087266)
chr2 (4-83)||(19540422-19540501)
chr2 (10-84)||(22317605-22317679)
chr2 (4-123)||(23235013-23235141)
chr2 (4-80)||(24377107-24377183)
chr2 (4-83)||(13963993-13964072)
chr2 (4-83)||(18376921-18377000)
chr2 (4-83)||(25829140-25829219)
chr2 (3-83)||(38781404-38781484)
chr2 (16-83)||(20568765-20568832)
chr2 (4-83)||(22455005-22455084)
chr2 (4-83)||(30666995-30667074)
chr2 (5-56)||(40782484-40782535)
chr2 (4-82)||(21537264-21537342)
chr2 (4-80)||(10009768-10009844)
chr2 (4-80)||(25037277-25037353)
chr2 (4-80)||(25041384-25041460)
chr2 (4-56)||(39037684-39037736)
chr2 (4-83)||(22188117-22188196)
chr2 (80-123)||(24576126-24576169)
chr2 (172-238)||(24377286-24377352)
chr2 (4-80)||(9015388-9015462)
chr2 (1-38)||(26619161-26619198)
chr2 (2-38)||(19115087-19115123)
chr2 (5-53)||(24576042-24576090)
chr2 (4-56)||(25189404-25189456)
chr2 (4-56)||(30621222-30621274)
chr2 (4-56)||(30623843-30623895)
chr2 (2-38)||(44881171-44881207)
[»] chr4 (55 HSPs)
chr4 (1-238)||(17398546-17398782)
chr4 (1-238)||(22190849-22191087)
chr4 (1-233)||(40860670-40860902)
chr4 (1-238)||(6517488-6517734)
chr4 (1-238)||(10692854-10693100)
chr4 (1-238)||(10906620-10906866)
chr4 (1-238)||(39419606-39419842)
chr4 (2-238)||(15475013-15475250)
chr4 (1-197)||(3105323-3105527)
chr4 (1-238)||(9751410-9751648)
chr4 (1-201)||(20977460-20977658)
chr4 (1-238)||(413005-413251)
chr4 (10-142)||(16940028-16940169)
chr4 (1-201)||(27188548-27188746)
chr4 (1-203)||(54679933-54680142)
chr4 (125-238)||(14571161-14571273)
chr4 (1-233)||(8105640-8105883)
chr4 (16-234)||(38513896-38514116)
chr4 (1-237)||(19884705-19884951)
chr4 (1-83)||(25651130-25651212)
chr4 (1-83)||(29121373-29121455)
chr4 (5-83)||(37435561-37435639)
chr4 (172-233)||(17247426-17247487)
chr4 (1-203)||(56532957-56533170)
chr4 (16-201)||(3499560-3499745)
chr4 (4-83)||(12601107-12601186)
chr4 (4-83)||(37985638-37985717)
chr4 (80-234)||(55731870-55732023)
chr4 (5-83)||(10072942-10073020)
chr4 (16-123)||(3483739-3483855)
chr4 (16-123)||(9140930-9141046)
chr4 (4-80)||(55380296-55380372)
chr4 (159-238)||(3793293-3793372)
chr4 (1-80)||(14604936-14605015)
chr4 (1-80)||(16853506-16853585)
chr4 (4-83)||(22675546-22675625)
chr4 (1-80)||(45833397-45833476)
chr4 (1-63)||(1672392-1672454)
chr4 (1-63)||(1674867-1674929)
chr4 (72-201)||(17700708-17700835)
chr4 (4-56)||(3395596-3395648)
chr4 (1-56)||(6641687-6641742)
chr4 (16-83)||(13576140-13576207)
chr4 (10-56)||(19621114-19621160)
chr4 (10-83)||(16632452-16632525)
chr4 (4-80)||(19911909-19911986)
chr4 (159-203)||(13576011-13576055)
chr4 (4-56)||(40846105-40846157)
chr4 (179-238)||(16853673-16853732)
chr4 (10-123)||(14904333-14904455)
chr4 (172-233)||(3395775-3395836)
chr4 (4-83)||(12811204-12811280)
chr4 (4-53)||(19666378-19666427)
chr4 (2-38)||(8685514-8685550)
chr4 (4-80)||(29680573-29680649)
[»] chr1 (54 HSPs)
chr1 (1-233)||(46088997-46089229)
chr1 (1-238)||(21134994-21135232)
chr1 (1-226)||(10250994-10251218)
chr1 (1-233)||(21702822-21703062)
chr1 (1-230)||(21204765-21204995)
chr1 (3-238)||(21984606-21984841)
chr1 (1-238)||(21120898-21121136)
chr1 (10-238)||(42284645-42284872)
chr1 (1-238)||(37642256-37642494)
chr1 (1-218)||(30572205-30572430)
chr1 (1-233)||(48570063-48570303)
chr1 (1-238)||(44821371-44821617)
chr1 (1-233)||(25448395-25448638)
chr1 (1-238)||(35040174-35040420)
chr1 (2-233)||(2327270-2327511)
chr1 (1-194)||(23024796-23024987)
chr1 (1-238)||(2834698-2834943)
chr1 (1-201)||(19215620-19215818)
chr1 (1-121)||(36134198-36134326)
chr1 (5-229)||(22427192-22427425)
chr1 (1-83)||(22600172-22600254)
chr1 (1-238)||(39200818-39201064)
chr1 (2-202)||(7744952-7745161)
chr1 (3-229)||(22464643-22464879)
chr1 (1-84)||(1900353-1900436)
chr1 (1-83)||(14263441-14263523)
chr1 (5-83)||(32785927-32786005)
chr1 (5-83)||(35401821-35401899)
chr1 (4-123)||(22201677-22201805)
chr1 (4-83)||(28492394-28492473)
chr1 (1-84)||(38282575-38282657)
chr1 (1-83)||(2268539-2268621)
chr1 (1-83)||(7309827-7309908)
chr1 (1-83)||(21191855-21191937)
chr1 (1-83)||(29215805-29215887)
chr1 (162-238)||(21544191-21544268)
chr1 (1-56)||(22153865-22153920)
chr1 (4-83)||(33256341-33256420)
chr1 (4-83)||(33276513-33276592)
chr1 (10-80)||(12284440-12284510)
chr1 (172-233)||(19170181-19170242)
chr1 (10-83)||(19717541-19717614)
chr1 (4-80)||(20954466-20954542)
chr1 (172-236)||(32785764-32785828)
chr1 (5-123)||(2267101-2267228)
chr1 (4-83)||(16235286-16235365)
chr1 (5-56)||(30893104-30893155)
chr1 (172-238)||(28492228-28492294)
chr1 (2-88)||(34255501-34255587)
chr1 (10-83)||(17024954-17025027)
chr1 (209-238)||(25448360-25448389)
chr1 (4-80)||(1577878-1577954)
chr1 (210-238)||(12613605-12613633)
chr1 (11-79)||(23036521-23036589)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-238)||(1621-1857)
scaffold1359 (1-197)||(552-757)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-233)||(25535-25767)
scaffold0056 (1-238)||(34669-34906)
[»] chr8 (59 HSPs)
chr8 (1-238)||(6407727-6407963)
chr8 (1-238)||(14989364-14989601)
chr8 (1-238)||(13430540-13430778)
chr8 (1-233)||(43639784-43640016)
chr8 (2-238)||(21301024-21301260)
chr8 (1-238)||(18151569-18151796)
chr8 (16-238)||(21288419-21288641)
chr8 (1-234)||(40845296-40845537)
chr8 (1-234)||(15335996-15336238)
chr8 (1-234)||(15425061-15425303)
chr8 (1-234)||(15516365-15516607)
chr8 (1-238)||(1745160-1745398)
chr8 (16-202)||(33560173-33560359)
chr8 (5-233)||(22673783-22674020)
chr8 (1-233)||(36105196-36105437)
chr8 (3-233)||(22663119-22663358)
chr8 (1-233)||(9320569-9320812)
chr8 (1-234)||(23185134-23185376)
chr8 (5-203)||(24551279-24551486)
chr8 (1-203)||(45538378-45538589)
chr8 (1-233)||(17797423-17797664)
chr8 (3-238)||(24832960-24833205)
chr8 (1-123)||(16207307-16207438)
chr8 (4-83)||(16188988-16189067)
chr8 (147-234)||(3598254-3598341)
chr8 (1-83)||(1237638-1237720)
chr8 (10-83)||(23263680-23263753)
chr8 (1-123)||(19943236-19943368)
chr8 (4-84)||(21932887-21932967)
chr8 (4-83)||(12757831-12757910)
chr8 (4-123)||(17441827-17441954)
chr8 (4-82)||(24646342-24646420)
chr8 (1-83)||(45567969-45568051)
chr8 (176-233)||(43774053-43774110)
chr8 (4-80)||(602791-602867)
chr8 (16-80)||(18679831-18679895)
chr8 (4-80)||(18719005-18719081)
chr8 (4-80)||(39693539-39693615)
chr8 (16-83)||(16681371-16681438)
chr8 (4-83)||(19156200-19156279)
chr8 (16-83)||(33082873-33082940)
chr8 (1-83)||(18685465-18685547)
chr8 (1-83)||(18722714-18722796)
chr8 (1-83)||(18731059-18731141)
chr8 (10-56)||(20382489-20382535)
chr8 (16-50)||(45292842-45292876)
chr8 (1-83)||(30421496-30421579)
chr8 (173-238)||(23271038-23271105)
chr8 (4-83)||(17914463-17914542)
chr8 (172-231)||(21933066-21933125)
chr8 (4-83)||(43644900-43644979)
chr8 (172-238)||(12757665-12757731)
chr8 (172-238)||(19156379-19156445)
chr8 (4-81)||(18321229-18321306)
chr8 (4-53)||(25164074-25164123)
chr8 (4-52)||(17267478-17267526)
chr8 (16-80)||(17525800-17525864)
chr8 (24-84)||(18121176-18121236)
chr8 (159-203)||(30421367-30421411)
[»] chr5 (50 HSPs)
chr5 (1-238)||(28464235-28464471)
chr5 (1-238)||(3245328-3245573)
chr5 (1-238)||(10848778-10849015)
chr5 (1-238)||(35931900-35932138)
chr5 (1-213)||(25930076-25930288)
chr5 (2-233)||(35986132-35986363)
chr5 (1-218)||(9088974-9089190)
chr5 (1-238)||(15516974-15517220)
chr5 (1-238)||(4887027-4887273)
chr5 (1-233)||(29138299-29138538)
chr5 (3-233)||(26759156-26759395)
chr5 (2-233)||(21660218-21660449)
chr5 (1-233)||(30742985-30743226)
chr5 (1-233)||(11993893-11994134)
chr5 (1-137)||(26765503-26765649)
chr5 (1-233)||(33933272-33933517)
chr5 (1-234)||(42243685-42243928)
chr5 (1-135)||(28139612-28139755)
chr5 (147-238)||(30115762-30115853)
chr5 (1-87)||(30115883-30115969)
chr5 (1-234)||(14086427-14086671)
chr5 (89-238)||(5429985-5430135)
chr5 (1-201)||(23391535-23391735)
chr5 (5-238)||(33022673-33022915)
chr5 (4-83)||(7745743-7745822)
chr5 (1-83)||(32160771-32160853)
chr5 (3-83)||(642757-642837)
chr5 (3-83)||(13545562-13545642)
chr5 (4-80)||(23413027-23413103)
chr5 (4-76)||(26784362-26784434)
chr5 (4-83)||(21910564-21910643)
chr5 (4-83)||(41566484-41566563)
chr5 (1-83)||(20550900-20550981)
chr5 (172-238)||(26784541-26784607)
chr5 (1-197)||(31117882-31118088)
chr5 (16-80)||(21072293-21072357)
chr5 (5-56)||(19536378-19536429)
chr5 (167-229)||(23478534-23478596)
chr5 (4-52)||(89503-89551)
chr5 (4-56)||(6499247-6499299)
chr5 (4-56)||(12352872-12352924)
chr5 (4-83)||(9398784-9398863)
chr5 (1-80)||(11208039-11208117)
chr5 (4-83)||(21199053-21199132)
chr5 (172-235)||(41566321-41566384)
chr5 (5-83)||(23881076-23881154)
chr5 (1-38)||(25096921-25096958)
chr5 (1-38)||(25154891-25154928)
chr5 (16-56)||(6512505-6512545)
chr5 (4-56)||(17814976-17815028)
[»] chr7 (72 HSPs)
chr7 (1-238)||(27871723-27871961)
chr7 (1-238)||(14425452-14425688)
chr7 (1-233)||(48062741-48062973)
chr7 (2-238)||(19339166-19339402)
chr7 (1-238)||(32264633-32264871)
chr7 (1-148)||(1293035-1293182)
chr7 (2-238)||(21381344-21381581)
chr7 (1-233)||(8182935-8183175)
chr7 (1-135)||(24794732-24794868)
chr7 (1-218)||(2265446-2265672)
chr7 (1-234)||(4821479-4821720)
chr7 (2-233)||(48805800-48806031)
chr7 (1-233)||(4411883-4412115)
chr7 (1-238)||(16111791-16112037)
chr7 (1-197)||(14426552-14426757)
chr7 (1-233)||(35952599-35952841)
chr7 (16-233)||(12174252-12174479)
chr7 (5-238)||(48236809-48237051)
chr7 (22-238)||(16542927-16543152)
chr7 (22-238)||(16622510-16622735)
chr7 (1-83)||(21283444-21283526)
chr7 (33-199)||(15704445-15704620)
chr7 (16-238)||(28622263-28622494)
chr7 (1-197)||(30944271-30944476)
chr7 (1-83)||(19711084-19711166)
chr7 (1-83)||(23280029-23280111)
chr7 (16-83)||(33605705-33605772)
chr7 (17-123)||(13692372-13692478)
chr7 (1-83)||(28409044-28409126)
chr7 (1-238)||(33691617-33691865)
chr7 (4-83)||(13137966-13138045)
chr7 (5-80)||(29935432-29935507)
chr7 (1-83)||(19237114-19237196)
chr7 (5-83)||(30945427-30945505)
chr7 (1-83)||(44467069-44467151)
chr7 (72-233)||(4428999-4429162)
chr7 (2-83)||(15467922-15468003)
chr7 (4-83)||(2913679-2913758)
chr7 (4-83)||(13880112-13880191)
chr7 (16-83)||(16309978-16310045)
chr7 (159-238)||(33605858-33605937)
chr7 (1-83)||(22578092-22578174)
chr7 (1-83)||(24788146-24788228)
chr7 (10-83)||(331659-331731)
chr7 (4-124)||(16316578-16316707)
chr7 (4-84)||(9069570-9069650)
chr7 (4-56)||(13648737-13648789)
chr7 (16-83)||(9709873-9709940)
chr7 (4-79)||(15088528-15088603)
chr7 (4-83)||(21692295-21692374)
chr7 (4-83)||(39284635-39284714)
chr7 (172-238)||(2913513-2913579)
chr7 (4-54)||(5000922-5000972)
chr7 (1-83)||(14193119-14193201)
chr7 (172-238)||(21695588-21695654)
chr7 (172-238)||(30026092-30026158)
chr7 (172-238)||(39284470-39284536)
chr7 (172-238)||(44467252-44467318)
chr7 (193-234)||(5826170-5826211)
chr7 (159-203)||(9709744-9709788)
chr7 (4-56)||(13018603-13018655)
chr7 (4-80)||(13730749-13730825)
chr7 (19-83)||(21695424-21695488)
chr7 (4-83)||(10883244-10883323)
chr7 (10-56)||(11792921-11792967)
chr7 (10-56)||(12366846-12366892)
chr7 (10-80)||(13260689-13260759)
chr7 (172-238)||(15088707-15088773)
chr7 (172-238)||(331831-331899)
chr7 (209-238)||(8183166-8183195)
chr7 (190-238)||(2500243-2500291)
chr7 (19-83)||(30025928-30025992)
[»] chr3 (59 HSPs)
chr3 (5-238)||(46796282-46796514)
chr3 (1-238)||(30054131-30054368)
chr3 (1-234)||(21605572-21605805)
chr3 (16-238)||(40850991-40851213)
chr3 (1-234)||(21636588-21636821)
chr3 (2-233)||(49666325-49666555)
chr3 (1-233)||(14955435-14955676)
chr3 (3-226)||(21640877-21641108)
chr3 (2-233)||(2785073-2785314)
chr3 (1-233)||(1727935-1728166)
chr3 (1-197)||(5213585-5213789)
chr3 (1-233)||(24775442-24775685)
chr3 (5-203)||(20627371-20627578)
chr3 (1-201)||(9699989-9700187)
chr3 (1-238)||(47207714-47207963)
chr3 (1-83)||(29855417-29855499)
chr3 (1-238)||(11223571-11223817)
chr3 (1-123)||(53056747-53056878)
chr3 (10-123)||(14969344-14969466)
chr3 (3-233)||(33583239-33583480)
chr3 (1-238)||(2561196-2561444)
chr3 (1-79)||(22140772-22140850)
chr3 (17-233)||(46349754-46349979)
chr3 (3-83)||(38177712-38177792)
chr3 (4-83)||(13948347-13948426)
chr3 (1-84)||(18121690-18121773)
chr3 (1-84)||(18142820-18142903)
chr3 (1-83)||(6090740-6090822)
chr3 (5-83)||(11909093-11909171)
chr3 (1-83)||(40799882-40799964)
chr3 (1-62)||(11868277-11868338)
chr3 (10-83)||(13780653-13780726)
chr3 (162-238)||(15833566-15833643)
chr3 (4-81)||(28582117-28582194)
chr3 (4-80)||(20646165-20646241)
chr3 (3-83)||(49553558-49553638)
chr3 (16-83)||(13824092-13824159)
chr3 (5-80)||(16658690-16658765)
chr3 (1-148)||(37412613-37412759)
chr3 (4-83)||(41495010-41495089)
chr3 (172-234)||(11869256-11869318)
chr3 (1-83)||(16032533-16032615)
chr3 (162-238)||(10529506-10529583)
chr3 (4-89)||(12963149-12963233)
chr3 (10-83)||(37467350-37467423)
chr3 (26-83)||(45858818-45858875)
chr3 (16-56)||(50300246-50300286)
chr3 (5-80)||(14393076-14393151)
chr3 (1-83)||(12388941-12389023)
chr3 (1-63)||(25398344-25398406)
chr3 (5-83)||(47405490-47405568)
chr3 (172-233)||(28582296-28582357)
chr3 (1-80)||(12726302-12726381)
chr3 (5-56)||(17239018-17239069)
chr3 (4-83)||(49642831-49642910)
chr3 (178-233)||(50300396-50300451)
chr3 (4-56)||(22804119-22804171)
chr3 (4-56)||(31303397-31303449)
chr3 (159-203)||(47405361-47405405)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-238)||(17631-17867)
[»] chr6 (45 HSPs)
chr6 (1-238)||(19065921-19066158)
chr6 (1-234)||(22076305-22076547)
chr6 (1-202)||(12349002-12349211)
chr6 (1-233)||(21618253-21618494)
chr6 (1-234)||(33351827-33352066)
chr6 (1-238)||(16877222-16877468)
chr6 (1-238)||(15954712-15954958)
chr6 (1-222)||(16336136-16336366)
chr6 (1-234)||(26589608-26589844)
chr6 (1-142)||(12423270-12423420)
chr6 (1-226)||(19832938-19833173)
chr6 (16-201)||(17316467-17316650)
chr6 (1-231)||(20487818-20488058)
chr6 (1-98)||(19482761-19482858)
chr6 (4-123)||(19086170-19086288)
chr6 (1-84)||(32544274-32544357)
chr6 (1-238)||(20730598-20730844)
chr6 (148-237)||(21235278-21235367)
chr6 (1-84)||(9717852-9717935)
chr6 (1-83)||(15531682-15531764)
chr6 (3-84)||(22802152-22802233)
chr6 (172-238)||(34451563-34451626)
chr6 (4-83)||(15987245-15987324)
chr6 (1-83)||(14100498-14100580)
chr6 (159-237)||(16265045-16265123)
chr6 (1-83)||(29918026-29918108)
chr6 (2-83)||(21235135-21235216)
chr6 (4-123)||(15302212-15302340)
chr6 (4-80)||(24116840-24116916)
chr6 (1-80)||(16265211-16265290)
chr6 (167-238)||(17608217-17608288)
chr6 (162-233)||(22386965-22387036)
chr6 (159-238)||(22802317-22802396)
chr6 (1-63)||(17381530-17381592)
chr6 (1-83)||(18435565-18435647)
chr6 (5-83)||(21625114-21625192)
chr6 (3-59)||(13435543-13435599)
chr6 (16-83)||(19688790-19688857)
chr6 (4-84)||(26972285-26972363)
chr6 (4-80)||(20112761-20112837)
chr6 (4-83)||(18378326-18378405)
chr6 (1-83)||(26943585-26943667)
chr6 (172-234)||(32544456-32544518)
chr6 (172-233)||(21128399-21128460)
chr6 (4-56)||(12715505-12715557)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-238)||(2568-2793)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-238)||(686-923)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-234)||(9569-9810)
scaffold0217 (1-233)||(21992-22233)
scaffold0217 (4-84)||(19043-19123)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-238)||(60812-61058)
[»] scaffold0527 (2 HSPs)
scaffold0527 (23-238)||(7963-8186)
scaffold0527 (115-238)||(1-123)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-231)||(7019-7258)
[»] scaffold0176 (1 HSPs)
scaffold0176 (5-238)||(9168-9409)
[»] scaffold0011 (3 HSPs)
scaffold0011 (47-234)||(65289-65484)
scaffold0011 (47-234)||(144334-144529)
scaffold0011 (1-83)||(164966-165048)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-233)||(215358-215599)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-233)||(7390-7622)
[»] scaffold0069 (1 HSPs)
scaffold0069 (2-218)||(5209-5426)
[»] scaffold0043 (1 HSPs)
scaffold0043 (16-234)||(78226-78453)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-233)||(3313-3554)
[»] scaffold0439 (1 HSPs)
scaffold0439 (3-233)||(6601-6840)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-125)||(87578-87702)
[»] scaffold0247 (2 HSPs)
scaffold0247 (105-236)||(23421-23551)
scaffold0247 (1-87)||(25415-25501)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-234)||(5459-5700)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-233)||(99069-99307)
scaffold0035 (16-132)||(19433-19559)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-197)||(211407-211612)
scaffold0004 (4-80)||(220250-220326)
scaffold0004 (4-83)||(377579-377658)
scaffold0004 (1-79)||(244308-244386)
[»] scaffold0005 (2 HSPs)
scaffold0005 (125-238)||(246103-246215)
scaffold0005 (1-80)||(212363-212442)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-123)||(2702-2832)
[»] scaffold1331 (2 HSPs)
scaffold1331 (16-195)||(1598-1786)
scaffold1331 (190-238)||(467-515)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-201)||(733-933)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-238)||(89911-90157)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-83)||(365-447)
scaffold0084 (4-83)||(49344-49423)
scaffold0084 (4-56)||(32497-32549)
[»] scaffold0151 (1 HSPs)
scaffold0151 (69-233)||(11447-11611)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-123)||(27400-27531)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-83)||(15642-15724)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-83)||(38105-38187)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-83)||(20991-21073)
[»] scaffold0411 (1 HSPs)
scaffold0411 (4-123)||(12221-12349)
[»] scaffold0251 (1 HSPs)
scaffold0251 (4-84)||(7715-7795)
[»] scaffold0771 (1 HSPs)
scaffold0771 (4-83)||(487-566)
[»] scaffold0422 (1 HSPs)
scaffold0422 (167-238)||(11929-12000)
[»] scaffold0227 (2 HSPs)
scaffold0227 (1-123)||(22685-22816)
scaffold0227 (172-229)||(22867-22924)
[»] scaffold0023 (1 HSPs)
scaffold0023 (5-123)||(103585-103712)
[»] scaffold0220 (1 HSPs)
scaffold0220 (5-83)||(1817-1895)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-83)||(10128-10210)
scaffold0161 (1-56)||(14819-14874)
[»] scaffold0026 (2 HSPs)
scaffold0026 (16-124)||(60040-60157)
scaffold0026 (10-79)||(7944-8013)
[»] scaffold0207 (2 HSPs)
scaffold0207 (16-231)||(10744-10958)
scaffold0207 (186-231)||(20814-20859)
[»] scaffold0177 (1 HSPs)
scaffold0177 (173-238)||(20248-20314)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-88)||(3910-3997)
[»] scaffold0426 (1 HSPs)
scaffold0426 (4-83)||(13583-13662)
[»] scaffold0359 (1 HSPs)
scaffold0359 (4-83)||(5710-5789)
[»] scaffold0050 (1 HSPs)
scaffold0050 (167-238)||(35401-35472)
[»] scaffold1747 (1 HSPs)
scaffold1747 (1-83)||(1326-1408)
[»] scaffold1745 (1 HSPs)
scaffold1745 (1-83)||(3-85)
[»] scaffold0120 (4 HSPs)
scaffold0120 (1-83)||(36795-36877)
scaffold0120 (1-83)||(42128-42210)
scaffold0120 (209-238)||(36615-36644)
scaffold0120 (209-238)||(42361-42390)
[»] scaffold0065 (1 HSPs)
scaffold0065 (5-83)||(1703-1781)
[»] scaffold0861 (1 HSPs)
scaffold0861 (6-83)||(4967-5044)
[»] scaffold0570 (1 HSPs)
scaffold0570 (162-233)||(1538-1610)
[»] scaffold0364 (1 HSPs)
scaffold0364 (3-83)||(6018-6098)
[»] scaffold0337 (1 HSPs)
scaffold0337 (4-123)||(14660-14788)
[»] scaffold0022 (2 HSPs)
scaffold0022 (172-232)||(39616-39676)
scaffold0022 (172-232)||(137676-137736)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-80)||(9978-10057)
[»] scaffold0324 (1 HSPs)
scaffold0324 (4-83)||(9968-10047)
[»] scaffold0290 (2 HSPs)
scaffold0290 (4-83)||(18641-18720)
scaffold0290 (174-202)||(18511-18539)
[»] scaffold0210 (1 HSPs)
scaffold0210 (5-80)||(1673-1748)
[»] scaffold0146 (1 HSPs)
scaffold0146 (5-56)||(15130-15181)
[»] scaffold0083 (1 HSPs)
scaffold0083 (16-83)||(25995-26062)
[»] scaffold0530 (1 HSPs)
scaffold0530 (10-56)||(2042-2088)
[»] scaffold0193 (1 HSPs)
scaffold0193 (18-83)||(15819-15885)
[»] scaffold0047 (1 HSPs)
scaffold0047 (5-83)||(9916-9994)


Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 40332090 - 40332327
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  40332090 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgct 40332189  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  40332190 atacttttccagtcttctgcaattttaggcgagtttgaatcctagaaagcagctttgaaagctttgggttacatctcctgatgaactgcagcttctggtg 40332289  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||| ||||| |||||||||||| |||||||||||    
T  40332290 attcacagcttctgatgaacttgcttatgatgacgtca 40332327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 31968140 - 31967904
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||    
T  31968140 acagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagttgttgct 31968041  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||  | |||||  ||| ||||| |||||||||||||||||||||||    
T  31968040 atacttttccagtcttctgcaattttatgcgagtttgaatccttg-aaacaacttttgaggctttaagttgcatcttctgatgaactgcagcttctggtg 31967942  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  31967941 attcacaacttcttatgaacttgcttctgatgatgtca 31967904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28551015 - 28550779
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||| ||    
T  28551015 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgtttct 28550916  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||  | | |||   || |||||||||||||||||||||||||||||    
T  28550915 atacttttccagtcttctgcaattttaggcgagtttgaatccttg-aaacagcttttgaggttttaaattgcatctcctgatgaactgcagcttctggtg 28550817  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||| ||||| |||||||||||| |||||||||||    
T  28550816 attcacagcttctgatgaacttgcttatgatgacgtca 28550779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1587130 - 1586893
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||      
T  1587130 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctttcaaaatagccgttgta 1587031  T
Q  101 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||| |||||||||||||| || ||  ||||||| |||||   ||||||||||  |||||||  ||| |||||||||||||||| |||||||||||    
T  1587030 atactttttcagtcttctgcaatcttcagatgagtttgaatcct-ttaaacaacttttgaagctttaagttccatctcctgatgaactccagcttctggt 1586932  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||| || ||||| ||||||||| ||||||||||||||    
T  1586931 gattctcagcttctgatgaacttgtttctgatgacgtca 1586893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 22776385 - 22776190
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  22776385 acagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgct 22776286  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 197  Q
    ||||||||| |||||| ||||||||||||||||| || | ||| | ||||||||||  |||||||  ||| |||||||||||||||| |||||||||    
T  22776285 atacttttcaagtcttttgcaattttaggcgagtctgaaaccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctg 22776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 22781763 - 22781568
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  22781763 acagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgct 22781664  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 197  Q
    ||||||||| |||||| ||||||||||||||||| || | ||| | ||||||||||  |||||||  ||| |||||||||||||||| |||||||||    
T  22781663 atacttttcaagtcttttgcaattttaggcgagtctgaaaccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctg 22781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22785752 - 22785521
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||| ||||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||    
T  22785752 acagagtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgct 22785653  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    |||| |||||||| ||||||||||||||||||||||| |  || | ||| | ||||  |||||||  ||| ||||||||||||||||| |||||||||||    
T  22785652 atacatttccagttttctgcaattttaggcgagtttgaaatcttg-aaatagcttttgaagctttaagttgcatctcctgatgaactgtagcttctggtg 22785554  T
Q  201 attcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||| ||||| |||||||||||| ||||||    
T  22785553 attcacagcttctgatgaacttgcttttgatga 22785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 44840437 - 44840670
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||     
T  44840437 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgcc 44840536  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    |||||||| ||||| |||||||| ||||||||||||| ||||| | ||||| ||||  |||||||  ||| |||||| ||||||||||||||||||| ||    
T  44840537 atactttttcagtc-tctgcaatgttaggcgagtttgaatccttg-aaacagcttttgaagctttaagttgcatctcttgatgaactgcagcttctgatg 44840634  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    | |     ||||| |||| |||||||||||||||||||    
T  44840635 aat--ttgcttctgatgatcttgcttctgatgacgtca 44840670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 3277037 - 3277270
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatac 104  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||| |||| |||| |||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttatac 3277136  T
Q  105 ttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgatt 203  Q
    |||| |||||||||||||| || || | |||||| || ||   ||||||||||  |||||||  ||| |||||||| ||||||| |||||||| ||||||    
T  3277137 tttttcagtcttctgcaatcttcagacaagtttgaattct-ttaaacaacttttgaagctttaagttccatctcctaatgaactccagcttctagtgatt 3277235  T
Q  204 cacaacttctaatgaacttgcttctgatgacgtca 238  Q
    | || ||||| |||||||||||||| |||||||||    
T  3277236 cccagcttctgatgaacttgcttctaatgacgtca 3277270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 14581527 - 14581653
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttc 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||| ||| |||||    
T  14581527 tggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatatttttc 14581626  T
Q  110 cagtcttctgcaattttaggcgagttt 136  Q
    |||||||||||||||||||||||||||    
T  14581627 cagtcttctgcaattttaggcgagttt 14581653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 33074229 - 33074470
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct---------ttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||||| |||||||| |||||||||| |||||||         | |||||||    
T  33074229 acagagtagtggagatagtggttgtacacttcgtacaatcgtattatgtcaacgttttttgaagaataagcatctaatgccttccaatctgtccaaaata 33074328  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||||||||||||||||| ||||| |||||||| |||||   ||||| ||||  ||| |||  ||| |||||||||||||||| ||    
T  33074329 gtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcct-ttaaacagcttttgaagttttaagttgcatctcctgatgaactaca 33074427  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
     ||||| ||||||| || ||||| || ||||||||||||||||    
T  33074428 acttctagtgattctcagcttctgataaacttgcttctgatga 33074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 34322031 - 34321792
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagc 93  Q
    |||||| || || ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||         |||||||||     
T  34322031 agagtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagt 34321932  T
Q  94 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 192  Q
     |||||||||||||||||| |||||||||| ||||| |||||||| |||||   ||||| ||||  | |||||  ||| |||||||||||||| | ||||    
T  34321931 cgttgctatacttttccaggcttctgcaatctttagacgagtttgaatcct-ttaaacagcttttgaggctttaagttgcatctcctgatgaattacagc 34321833  T
Q  193 ttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||| ||||||| || ||||| || ||||||||||||||||    
T  34321832 ttctagtgattctcagcttctgataaacttgcttctgatga 34321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 23392763 - 23392569
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 102  Q
    |||||||||||  ||||||||||||||||||||||   |||||| ||||||||| |||||  |  ||||||||||||| |||||||||||| ||||| ||    
T  23392763 agagtaatggaagtagtggttgtacacttcgtacagttgtactaggtcaacgctctttgagaagaaagcatccaatgcatttcaaaatagccgttgccat 23392664  T
Q  103 acttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 197  Q
    ||||||||||||||||| ||||| |||||||||| |  |||| | ||||||||||  || ||||| |||  || | ||||||||||| ||||||||    
T  23392663 acttttccagtcttctgtaatttctaggcgagttagagtccttg-aaacaacttttgaaactttgagttcaatttactgatgaactgtagcttctg 23392569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31328063 - 31327821
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaata 91  Q
    |||||||| ||||| ||||||||||||||||||| | ||| |||| |||||||||| |||||| || ||||||||||||| ||          |||||||    
T  31328063 acagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaata 31327964  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttca-aagctttgggttacatctcctgatgaactg 188  Q
    |  ||||||  |||| || ||||||||||||| |||||||||||||| |||| | |||  |||||||   || ||||  ||| |||||||||||||||||    
T  31327963 gtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaa--caactttttgaaactttaagttgcatctcctgatgaactg 31327866  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||    
T  31327865 cagcttctggtgattcacagcttctgataaacttgcttctgatga 31327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31334784 - 31334542
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaata 91  Q
    |||||||| ||||| ||||||||||||||||||| | ||| |||| |||||||||| |||||| || ||||||||||||| ||          |||||||    
T  31334784 acagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaata 31334685  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttca-aagctttgggttacatctcctgatgaactg 188  Q
    |  ||||||  |||| || ||||||||||||| |||||||||||||| |||| | |||  |||||||   || ||||  ||| |||||||||||||||||    
T  31334684 gtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaa--caactttttgaaactttaagttgcatctcctgatgaactg 31334587  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||    
T  31334586 cagcttctggtgattcacagcttctgataaacttgcttctgatga 31334542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 20152117 - 20151885
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| || | ||||||  ||||    
T  20152117 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcactt 20152018  T
Q  107 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagcttt-gggttacatctcctgatgaactgcagcttctggtgattc 204  Q
    |||||||||||||||||  |||| |||| ||  |||| |   |||||||||  |||||||   ||| ||||||||||||| ||||||||||||||||||     
T  20152017 ttccagtcttctgcaatgcttagacgagattaaatcc-attgaacaacttttgaagctttaatgttgcatctcctgatgagctgcagcttctggtgattt 20151919  T
Q  205 acaacttctaatgaacttgcttctgatgacgtca 238  Q
     || ||||| ||||||||| ||||||||||||||    
T  20151918 tcagcttctgatgaacttgtttctgatgacgtca 20151885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 28701322 - 28701115
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 95  Q
    |||| ||||| || |||||||||||||||||||||| |||| |||||||||  |||||| || ||||||||||||         |||||||||||| |||    
T  28701322 agtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgccttcaaatcctttcaaaatatctg 28701223  T
Q  96 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    ||||| |||||||||||||||||||||| || || |||| ||| || |||  ||||| ||||  |||| ||  ||| |||| | ||||||||||||||||    
T  28701222 ttgctttacttttccagtcttctgcaatcttaagacgaggttgaat-ctattaaacagcttttgaagccttaagttgcatcccatgatgaactgcagctt 28701124  T
Q  195 ctggtgatt 203  Q
    |||||||||    
T  28701123 ctggtgatt 28701115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 28711795 - 28711584
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct---------ttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |||||| || |||||||||||||||         ||| |||||    
T  28711795 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaattcattcgaaata 28711696  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  |||||| |||||||||||||||||||||| ||||| | || ||| |||| |  ||||| ||||  |||| ||  ||| |||| | | ||||||||||    
T  28711695 gtcgttgctttacttttccagtcttctgcaatctttagacaaggttgaatcc-attaaacagcttttgaagccttaagttgcatcccattatgaactgca 28711597  T
Q  191 gcttctggtgatt 203  Q
    |||||||||||||    
T  28711596 gcttctggtgatt 28711584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 22802463 - 22802668
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatc---------caatgcctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||||| || |||||| ||||||||||         |||  ||||||||||||    
T  22802463 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaaata 22802562  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    ||  ||||| ||| |||| ||||||||||||| ||||| |||||||| |||| |  ||| | ||||  || ||||  ||| |||||||||||||||||||    
T  22802563 gccattgctttacctttctagtcttctgcaatctttagacgagtttgaatcc-attaaatagcttttgaatctttaagttgcatctcctgatgaactgca 22802661  T
Q  191 gcttctg 197  Q
    | |||||    
T  22802662 ggttctg 22802668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 31800984 - 31800741
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||| |||||| |  || |||||||||         ||||||||||||    
T  31800984 acagagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctttgaagatcaaacatccaatgctttcaaatcctttcaaaata 31800885  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | ||||| |  |||||||||||||||||||||   ||| |||||||| |||| |  || || ||||  |||||||  ||| |||| | ||||||||||||    
T  31800884 gttgttgtttcacttttccagtcttctgcaataaatagacgagtttggatcc-actaagcagcttttgaagctttaagttgcatcccatgatgaactgca 31800786  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacg 235  Q
    | |||||||||||     ||||| || ||||||||||||||||||    
T  31800785 gtttctggtgattatttgcttctgataaacttgcttctgatgacg 31800741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 35744094 - 35743858
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 94  Q
    ||||| ||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||| ||||| |||||         |||| ||||||||      
T  35744094 gagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatccttccaaaatagtc 35743995  T
Q  95 gttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 193  Q
    ||||||||||||||||| | ||||||||| ||||| |  ||||| |  ||   ||||||||||  | |||||  ||| |||||||||||||||| |||||    
T  35743994 gttgctatacttttccaatattctgcaatctttagac--gtttg-agtctgttaaacaacttttgacgctttaagttgcatctcctgatgaactacagct 35743898  T
Q  194 tctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||  || ||||  || ||||||||||||||||    
T  35743897 tctggtgattttcagcttccgataaacttgcttctgatga 35743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 30557416 - 30557175
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 92  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||          ||||||||||||    
T  30557416 agagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgtgttcaaattctttcaaaatag 30557317  T
Q  93 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
      | ||||  |||||| ||||| ||||||||  |||| |||| ||| |||| |  |||||| |||  |||| ||  ||| ||||  ||||||||||||||    
T  30557316 tcgatgcttcactttttcagtcctctgcaatccttagacgaggttgaatcccattaaacaatttttgaagccttaagttgcatcctctgatgaactgcag 30557217  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||    | ||||| |||||||||||||||||||    
T  30557216 cttctggtgatatttagcttctgatgaacttgcttctgatga 30557175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 6392636 - 6392884
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| |||||||||  ||||||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||    
T  6392636 acagagtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaat 6392735  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    ||  ||||||  |||||||||||||||||||||  |||| |||| ||| |||  |  ||||| ||||  |||| ||  | | ||||  ||||||||||||    
T  6392736 agtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcacattaaacagcttttgaagccttaagatgcatcctctgatgaactgc 6392835  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    | ||| ||||||||   | ||||| || |||||||||||||||||||||    
T  6392836 aacttatggtgatttttagcttctgataaacttgcttctgatgacgtca 6392884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 6574221 - 6573973
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaac-gtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaat 90  Q
    |||||||| ||||| |||||||||||||||||||||||   ||||| |||||||||| |||||| || || |||||||||||||         ||||| |    
T  6574221 acagagtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaact 6574122  T
Q  91 agctgttgctatacttttccagtcttctgcaatt--ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactg 188  Q
    ||  ||||||  |||||||||||||||||||||   |||| |||| ||  |||  |   |||||| ||  |||||||  ||| ||||| |||||||||||    
T  6574121 agtcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatca-attgaacaacctttgaagctttatgttgcatcttctgatgaactg 6574023  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    || ||||| ||||||  || ||||| ||||||||||||||||||||||||    
T  6574022 caacttctagtgattttcagcttctgatgaacttgcttctgatgacgtca 6573973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 45087266 - 45087069
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||||||||||||| |||||||||| |||  | |||||||||| ||||         |||||||||||||  ||||||  ||||    
T  45087266 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcactt 45087167  T
Q  107 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 202  Q
    |||||||||||||||||  |||| |||| ||| |||| |  ||||||| |||  |||||||  ||| ||||  ||||||||||| ||||||| |||||    
T  45087166 ttccagtcttctgcaatccttagacgaggttgaatcccattaaacaactttttgaagctttaagttgcatcctctgatgaactgtagcttctagtgat 45087069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 19540422 - 19540501
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||| || || ||||||||||| ||||    
T  19540422 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatacctt 19540501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 22317605 - 22317679
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    ||||| ||||||||||| |||||||||||  ||||| |||||||||| |||||| || |||||||||||||||||    
T  22317605 tggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttt 22317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 23235013 - 23235141
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagct 94  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||| || ||  || ||||||||||||||||         ||||||||||||      
T  23235013 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaattctttcaaaatagtc 23235112  T
Q  95 gttgctatacttttccagtcttctgcaat 123  Q
    |||||| |||| |||||||||||||||||    
T  23235113 gttgctttactcttccagtcttctgcaat 23235141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 24377107 - 24377183
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  24377107 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 24377183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 13964072 - 13963993
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  13964072 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 13963993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 18377000 - 18376921
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  18377000 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 18376921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 25829140 - 25829219
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  25829140 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 25829219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 38781404 - 38781484
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||| ||||  |||||||||||||||||||||||  ||||| |||||||||| |||||| || || ||| |||||||||    
T  38781404 agagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaatcattcaatgcctt 38781484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 20568832 - 20568765
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  20568832 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 20568765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 22455084 - 22455005
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||||||  || |  ||||||||||||||||    
T  22455084 gagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaagcaagcatccaatgcctt 22455005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 30666995 - 30667074
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || |  ||||||||||||||||    
T  30666995 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagatcaagcatccaatgcctt 30667074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 40782484 - 40782535
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  40782484 agtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 40782535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 21537342 - 21537264
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct 82  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || |  |||||||||||||||    
T  21537342 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcct 21537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 10009844 - 10009768
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| ||||||||||||| |||||||||  |||||||||||||| | ||  || || |||||||||||||    
T  10009844 gagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaacaagcatccaatgc 10009768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 25037353 - 25037277
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||| |||||||||||||  || || || ||||||||||    
T  25037353 gagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgc 25037277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 25041460 - 25041384
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||| ||||  ||||| |||||||||||||  || || || ||||||||||    
T  25041460 gagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgc 25041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 39037736 - 39037684
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  39037736 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 39037684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 22188196 - 22188117
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||   |||| ||| |||||| ||  || || ||||||||||||||||    
T  22188196 gagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaacaagcatccaatgcctt 22188117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 123
Target Start/End: Original strand, 24576126 - 24576169
Alignment:
Q  80 cctttcaaaatagctgttgctatacttttccagtcttctgcaat 123  Q
    ||||||||||||| |||||||  |||||||||||||||||||||    
T  24576126 cctttcaaaatagttgttgcttcacttttccagtcttctgcaat 24576169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 24377286 - 24377352
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||| ||||||||| ||||||||||||||    | ||||| |||||||| |||||||||||||||    
T  24377286 catctcttgatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatgacgtca 24377352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 9015462 - 9015388
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| ||||||||||||||  |||||||  ||||| |||||||||| ||  || ||||||||||||||||    
T  9015462 gagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc 9015388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26619198 - 26619161
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaa 38  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  26619198 acagagtagtggagatagtggttgtacacttcgtacaa 26619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 19115087 - 19115123
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaa 38  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  19115087 cagagtagtggagatagtggttgtacacttcgtacaa 19115123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 24576042 - 24576090
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaac 53  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||    
T  24576042 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaac 24576090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 25189404 - 25189456
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||| ||||||||||    
T  25189404 gagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgct 25189456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30621222 - 30621274
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  30621222 gagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgct 30621274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 30623843 - 30623895
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  30623843 gagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgct 30623895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 44881171 - 44881207
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaa 38  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  44881171 cagagtagtggagatagtggttgtacacttcgtacaa 44881207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 17398782 - 17398546
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||    
T  17398782 acagagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgct 17398683  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||  |||||||  ||| ||||||||||||||| |||||||||||||    
T  17398682 atacttttccagtcttctgcaattttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcctgatgaaccgcagcttctggtg 17398584  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||| | ||||| ||||||||||||||||||||||||    
T  17398583 attcatagcttctgatgaacttgcttctgatgacgtca 17398546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 22190849 - 22191087
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||| ||||||     
T  22190849 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaatcagcatccaatgcatttcaaaatagttgttgcc 22190948  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
    ||||||||||||||||||||||||| || || |||| |  |||| | ||||| | ||| ||| ||||  ||| || ||| ||||||||||||||||||||    
T  22190949 atacttttccagtcttctgcaatttctaagcaagttagagtccttg-aaacagcttttgaaaactttaagttccacctcttgatgaactgcagcttctgg 22191047  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||||||||||||||||||||||    
T  22191048 tgatacacagcttctgatgaacttgcttctgatgacgtca 22191087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 40860670 - 40860902
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||| || ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| ||||  ||||     
T  40860670 acagagtagtggaagtagtggttgtacacatcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaattagccattgcc 40860769  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||||||||||||||| ||||||||||    |||| | ||||||||||  || ||||  ||| ||||||||||||||||| ||||||||||    
T  40860770 atacttttccagtcttctgcaatttctaggcgagttatagtccttg-aaacaacttttgaaactttaagttccatctcctgatgaactgtagcttctggt 40860868  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| |||||||||| |||||| ||||| ||||||    
T  40860869 gatacacaacttctgatgaacctgcttatgatga 40860902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 6517488 - 6517734
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||         ||| |||||||    
T  6517488 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaatccttccaaaata 6517587  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||||||||||||||||| ||||| |||||||| |||||  |||  ||||||  |||||||  ||| |||||||||||||||| ||    
T  6517588 gtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaat-aacttttgaagctttaagttgcatctcctgatgaactaca 6517686  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
     ||||||||||||| || ||||| ||||||||||||||||||||||||    
T  6517687 acttctggtgattctcagcttctgatgaacttgcttctgatgacgtca 6517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10692854 - 10693100
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||| || ||||||||||||||||         ||||||||    
T  10692854 acagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 10692953  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  10692954 gttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactaca 10693052  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||    
T  10693053 gcttctggtgattctcagcttctgatgaacttgcttctgatgacgtca 10693100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10906620 - 10906866
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||| || ||||||||||||||||         ||||||||    
T  10906620 acagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 10906719  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  10906720 gttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactaca 10906818  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||    
T  10906819 gcttctggtgattctcagcttctgatgaacttgcttctgatgacgtca 10906866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39419842 - 39419606
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||| || |||| |||| |||||     
T  39419842 acagagtaatggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgc-ttttgaagaattagcatcaaatgcattccaaactagccgttgcc 39419744  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||| || ||||||| || ||||| |||||||||| |  |||| | ||||| ||||  || ||||| |||  || ||||||||||||||||||||||||    
T  39419743 acactctttcagtcttttgtaatttctaggcgagttagagtccttg-aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggt 39419645  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||| |||||||||| ||||||| ||||||||||||||||    
T  39419644 gatacacaacttctgatgaactagcttctgatgacgtca 39419606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 15475250 - 15475013
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 101  Q
    ||||||| ||||  || ||||||||||||||||| |||||||||||||||||||| |||||  | |||||||||||||| |||||||||||| ||||| |    
T  15475250 cagagtagtggaagtattggttgtacacttcgtataaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgcca 15475151  T
Q  102 tacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    |||||||| | ||||||||||| ||||| ||||||   ||||| | ||||| ||||  || ||||| |||  || ||||||||||||| |||||||||||    
T  15475150 tacttttctactcttctgcaatctttagacgagttaaaatccttg-aaacagcttttgaaactttgagttcaatttcctgatgaactgtagcttctggtg 15475052  T
Q  201 attcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    || |||| ||| | |||||| ||||||||||||||||||    
T  15475051 atacacagcttttgatgaactttgcttctgatgacgtca 15475013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 3105527 - 3105323
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||| |         |||||||||||    
T  3105527 acagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaatcctttcaaaata 3105428  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    || ||||  ||||||||||||||||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  ||| ||||||||||||||||||||    
T  3105427 gccgttggaatacttttccagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttgcatctcctgatgaactgcag 3105329  T
Q  192 cttctg 197  Q
    ||||||    
T  3105328 cttctg 3105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 9751648 - 9751410
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  ||||||||||||||||||| ||||| ||||||||||||||| |||||| ||| |||||||||||| ||||||| |||| |||||     
T  9751648 acagagtagtggaagtagtggttgtacacttcgtgcaaacatactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgcc 9751549  T
Q  101 atacttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||| ||||||||||| | || ||||||||||||| |  |||| | |||||  |||  ||   ||| | | |||||| |||||||||||||||||||||    
T  9751548 acactcttccagtcttccgtaatttttaggcgagttagagtccttg-aaacaggttttgaaaacttgagctccatctcttgatgaactgcagcttctggt 9751450  T
Q  200 gattcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    ||| || | ||||| |||||| ||||||||||||||||||    
T  9751449 gatacatagcttctgatgaactttgcttctgatgacgtca 9751410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 20977460 - 20977658
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| || || |||||||||||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||| |||| |    
T  20977460 acagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagccgttgtt 20977559  T
Q  101 atacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||||||||  |||||||  |||  |||| ||||||| ||||||||||||||    
T  20977560 a-actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacaacttttgaagctttatgtt-gatcttctgatgatctgcagcttctggt 20977656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 413005 - 413251
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| |||||  |||||||||||||||||||||| |||||| |||||||||| |||||| || || ||| |||||||||         ||||| ||    
T  413005 acagagtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaatta 413104  T
Q  92 gctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || ||||||  ||||||| |||||||||||||  |||| |||| ||| |||| |   |||||||||  |||||||  |||  ||||||||||||||||||    
T  413105 gccgttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatcc-attgaacaacttttgaagctttaagttgaatctcctgatgaactgca 413203  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||  || ||||| ||||||||||||||||||||||||    
T  413204 gcttctggtgattttcagcttctgatgaacttgcttctgatgacgtca 413251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 16940028 - 16940169
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||         |||||||||||||  ||||||    
T  16940028 tggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttgct 16940127  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcc 142  Q
    ||||||||||||||||||||||| |||| |||||||| ||||    
T  16940128 atacttttccagtcttctgcaatcttagacgagtttgaatcc 16940169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 27188746 - 27188548
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| || || |||||||| ||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||  |||| |    
T  27188746 acagagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtt 27188647  T
Q  101 atacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||    
T  27188646 a-actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacaacttttgaagctttaggtt-gatcttctgatgatctgcagcttctggt 27188550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 54679933 - 54680142
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||| ||| |||||| || || |||||||||         ||||||||||||    
T  54679933 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaata 54680032  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | |||||||  |||||||||||||||||||||  |||| ||||||||    | |  ||||| ||||  |||||||  ||| |||||||||||||||||||    
T  54680033 gttgttgcttcacttttccagtcttctgcaatcattagacgagtttg---accattaaacagcttttgaagctttaagttgcatctcctgatgaactgca 54680129  T
Q  191 gcttctggtgatt 203  Q
    |||||||||||||    
T  54680130 gcttctggtgatt 54680142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 14571161 - 14571273
Alignment:
Q  125 ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgc 224  Q
    ||||||||||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  14571161 ttaggcgagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgc 14571259  T
Q  225 ttctgatgacgtca 238  Q
    ||||||||||||||    
T  14571260 ttctgatgacgtca 14571273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8105640 - 8105883
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||    
T  8105640 acagagtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaat 8105739  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    ||| ||||||  | |||||||||||||||||||  |||| |||  ||| |||| |  ||||||||||  |||| ||  ||| ||||  || |||||| ||    
T  8105740 agccgttgcttcaattttccagtcttctgcaatccttagacgaagttgaatcccattaaacaacttttgaagccttaagttgcatcctctaatgaacggc 8105839  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    | ||||||||||||   ||||||| || ||||||||||||||||    
T  8105840 aacttctggtgatttttaacttctgataaacttgcttctgatga 8105883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 38513896 - 38514116
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||| | |||||||||| ||| ||| |||| ||||  | ||| |||||||||    
T  38513896 tagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaattaacatccaatgcattttaaactagccgttgtcacactcttccagtct 38513995  T
Q  116 tctgcaattt--taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttc 212  Q
    |||  |||||  ||||||| || |  |||| | ||||| | ||| ||||| ||| ||| |||||| |||||||||||||||||| ||||| || | ||||    
T  38513996 tctttaattttataggcgaattagagtccttg-aaacagcttttgaaagc-ttgagttccatctcttgatgaactgcagcttctagtgatacatagcttc 38514093  T
Q  213 taatgaact-tgcttctgatgac 234  Q
    | |||||||  ||||||||||||    
T  38514094 tgatgaactaggcttctgatgac 38514116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 19884705 - 19884951
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    ||||| || ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| ||    
T  19884705 acagattagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaacta 19884804  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagcttt--gggttacatctcctgatgaactg 188  Q
    |  ||||||  |||||||||||||||||||||  |||| |||| ||  ||||  |  |||| | ||  |||||||  |  || ||||||||||||||||     
T  19884805 gtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccatg--aacatcctttgaagctttaagtcttgcatctcctgatgaacta 19884902  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtc 237  Q
    |||||||||||||||  || ||||| |||||||||||||||||||||||    
T  19884903 cagcttctggtgattgtcagcttctgatgaacttgcttctgatgacgtc 19884951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25651212 - 25651130
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||| |||||||||    
T  25651212 acagagtagtggaggtagtggttgtacactttgtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgcctt 25651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29121373 - 29121455
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||| || || ||||||||| ||||||    
T  29121373 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgcctt 29121455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 37435639 - 37435561
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||||||||| |||||| || ||||||||||||||||    
T  37435639 agtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgcctt 37435561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 17247426 - 17247487
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  17247426 catctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 17247487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 56533170 - 56532957
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||  |||||||||||||||||||||||||||||| |||||||||| ||||||  || || |||| ||||         |||||||||||    
T  56533170 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaaacatctaatgcattcaaatcctttcaaaat 56533071  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    ||| ||||||  | |||| ||||||||||||||  |||| |||| ||| |||| | |||||| ||||  |||| ||  ||||||||  || |||||||||    
T  56533070 agccgttgcttcattttttcagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagccttaagttacatcctctaatgaactgc 56532971  T
Q  190 agcttctggtgatt 203  Q
    || |||||||||||    
T  56532970 agtttctggtgatt 56532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 3499745 - 3499560
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||| ||  |||||||||||  ||||||  |||| ||||  |||||  ||||||||    
T  3499745 tagtggttgtacacttcgtacaaatgtactatgtcaacgctcattgaagaaatagcatccaatgtatttcaatctagccgttgtcatactcctccagtct 3499646  T
Q  116 tctgcaa--ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 201  Q
    |||| ||  |||| || ||| ||| ||||| | ||||| ||||  ||||| | ||||  |||| ||||||| ||||||||||||||||    
T  3499645 tctgtaatctttttggtgagcttgaatccttg-aaacagcttttgaagctctaggtt-gatcttctgatgatctgcagcttctggtga 3499560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 12601107 - 12601186
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  12601107 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 12601186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 37985717 - 37985638
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  37985717 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 37985638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 55731870 - 55732023
Alignment:
Q  80 cctttcaaaatagctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcc 178  Q
    |||||||||||||  |||| | ||| | ||||||||| ||||||| |||| |||||||| |||| |  ||||||||||  ||| |||  ||| |||||||    
T  55731870 cctttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatcc-attaaacaacttttgaagttttaagttgcatctcc 55731968  T
Q  179 tgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||||||||| |||||||| || |||||||  |||||| ||||||||||    
T  55731969 tgatgaactgcagcttccggtgattctcagcttctaa-aaacttgtttctgatgac 55732023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 10072942 - 10073020
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| ||||||||||||||||||||||   ||||| |||||||||| ||||||||| |||| |||||||||||    
T  10072942 agtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctttgaataacaagcctccaatgcctt 10073020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 3483739 - 3483855
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||| | ||||||||||  ||||| |||||||||| |||||| |||||||||||||||         |||||||||||||  ||||||  ||||    
T  3483739 tagtggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 3483838  T
Q  107 ttccagtcttctgcaat 123  Q
    |||||||||||||||||    
T  3483839 ttccagtcttctgcaat 3483855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 9140930 - 9141046
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||         |||||||||||||  |||||| |||||    
T  9140930 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgctttactt 9141029  T
Q  107 ttccagtcttctgcaat 123  Q
    |||||||||||| ||||    
T  9141030 ttccagtcttctacaat 9141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 55380296 - 55380372
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  55380296 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 55380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 3793293 - 3793372
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||  ||| ||||||||||||||||||||||||| ||||||  || |||||  ||||||||||| |||||||||||    
T  3793293 aagctttaagttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatgacgtca 3793372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14605015 - 14604936
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  14605015 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 14604936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16853506 - 16853585
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| ||||||||||||||||| |||| | ||||| |||||||||| |||||  || |||||||||||||    
T  16853506 acagagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctttgaggaacaagcatccaatgc 16853585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 22675625 - 22675546
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| |||||| || ||||||| ||||||||    
T  22675625 gagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctt 22675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45833397 - 45833476
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  45833397 acagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaaaagcatccaatgc 45833476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1672392 - 1672454
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 63  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | |||||||| | ||||||    
T  1672392 acagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctttgaa 1672454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1674867 - 1674929
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 63  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | |||||||| | ||||||    
T  1674867 acagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctttgaa 1674929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 201
Target Start/End: Complemental strand, 17700835 - 17700708
Alignment:
Q  72 atccaatgcctttcaaaatagctgttgctatacttttccagtcttctgcaatttta-ggcgagtttgtatcctagaaaacaactttcaaagctttgggtt 170  Q
    ||||||||| |||||||||||| |||| || ||||| | ||||||||||||||||  |||||| ||| ||||| |||| |||||||  ||||||| ||||    
T  17700835 atccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaa-caacttttgaagctttaggtt 17700738  T
Q  171 acatctcctgatgaactgcagcttctggtga 201  Q
      |||| ||||||| ||||||||||||||||    
T  17700737 g-atcttctgatgatctgcagcttctggtga 17700708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3395596 - 3395648
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  3395596 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 3395648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6641687 - 6641742
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  6641687 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 6641742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 13576207 - 13576140
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| |||||||||||||   |||||||||||||||| |||||| || ||||||| ||||||||    
T  13576207 tagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgcctt 13576140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 19621160 - 19621114
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  19621160 tggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 19621114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 16632452 - 16632525
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||| ||||||||||||    
T  16632452 tggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagaatccaatgcctt 16632525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 19911986 - 19911909
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||| ||||||   ||||||||||||||| |||  || ||||||||||||||||    
T  19911986 gagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctttcaaagaataagcatccaatgc 19911909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 13576055 - 13576011
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 203  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||    
T  13576055 aagctttatgttgcatctcctgatgaactgcagcttctggtgatt 13576011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 40846105 - 40846157
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  40846105 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 40846157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 16853673 - 16853732
Alignment:
Q  179 tgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||| || ||| |||||||||||| ||||| || |||||||||||||||||||||    
T  16853673 tgatcaactacaacttatggtgattcacagcttctgataaacttgcttctgatgacgtca 16853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 14904455 - 14904333
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 100  Q
    ||||| || |||||||  |||||||||||  |||||||||||||||| ||  || |||||||||||||||         ||||||||||| |  ||||||    
T  14904455 tggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccaatgtcttcaaatcctttcaaaatggacgttgct 14904356  T
Q  101 atacttttccagtcttctgcaat 123  Q
      |||||||||||||||||||||    
T  14904355 tcacttttccagtcttctgcaat 14904333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 3395775 - 3395836
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||||||  ||||||| |||||   |||||||| || ||||||||||||||||    
T  3395775 catctcctgatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgatga 3395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 12811280 - 12811204
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||   |||| |||||||||| ||   | || ||||||||||||||||    
T  12811280 gagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctatt---agaacaagcatccaatgcctt 12811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 19666378 - 19666427
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaac 53  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||    
T  19666378 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaac 19666427  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 8685550 - 8685514
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaa 38  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  8685550 cagagtagtggagatagtggttgtacacttcgtacaa 8685514  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 29680649 - 29680573
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| || || |||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  29680649 gagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 29680573  T

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Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 46088997 - 46089229
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||     
T  46088997 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgcc 46089096  T
Q  101 atacttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| | ||||| ||||  |||||||  ||| |||||| |||||||||||||||||||||    
T  46089097 atacttttccagtcttctgcaatttttaggcgagtttgaatccttg-aaacagcttttgaagctttaagttgcatctcatgatgaactgcagcttctggt 46089195  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| |||||||| | |||||||||||||||||||    
T  46089196 gatacacaacttatgatgaacttgcttctgatga 46089229  T

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Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 21135232 - 21134994
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| ||||||||||||     
T  21135232 acagagtagtggatttagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcatttcagaatagctgttgcc 21135133  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
    ||| ||||||||||||||| ||||| |||| ||||| |  |||| | ||||||| ||| ||| ||||  ||| ||||||||||||||||||| |||||||    
T  21135132 atatttttccagtcttctgtaatttctaggtgagttagattccttg-aaacaacttttgaaaactttaagttccatctcctgatgaactgcaacttctgg 21135034  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  21135033 tgatacacaacttctgatgaacttgcttctgatgacgtca 21134994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10250994 - 10251218
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||| |||| |||| |||| |    
T  10250994 acagagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgccttccaaattagccgttgtt 10251093  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||| |||| |||||||| |||||   ||||||||||  |||||||  ||| |||||||||||||||||||||||||||||    
T  10251094 atacttttccagtcttctgcaatcttagacgagtttgaatcct-ttaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtg 10251192  T
Q  201 attcacaacttctaatgaacttgctt 226  Q
    ||||| | ||||| ||||||||||||    
T  10251193 attcatagcttctgatgaacttgctt 10251218  T

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Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 21702822 - 21703062
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||         ||||||||||    
T  21702822 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaatcctttcaaaata 21702921  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    || ||||||||||||||| ||||||||||||| |||| |||||||| ||||| |||| ||| |||  |||||||  ||| ||||||||||||||||||||    
T  21702922 gccgttgctatacttttcaagtcttctgcaatcttagacgagtttgaatccttgaaa-caaattttgaagctttaagttgcatctcctgatgaactgcag 21703020  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  21703021 cttctggtgattcacagcttctgatgtacttgcttctgatga 21703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 21204995 - 21204765
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||||| |||||||||||| |||||     
T  21204995 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattaacatccaatgcatttcaaaatagccgttgcc 21204896  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
    ||||||||||||||||||||||||| |||||||||| |  |||| | ||||||| ||| ||| ||||  ||| |||||| ||||||||||||||||||||    
T  21204895 atacttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacaacttttaaaaactttaagttccatctcttgatgaactgcagcttctgg 21204797  T
Q  199 tgattcacaacttctaatgaacttgcttctga 230  Q
    |||| |||||||||| ||||||||||||||||    
T  21204796 tgatacacaacttctgatgaacttgcttctga 21204765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 21984606 - 21984841
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctat 102  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||| | ||    
T  21984606 agagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagctgtttccat 21984705  T
Q  103 acttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 201  Q
    ||||||||||| ||||||||| | |||||||||| |  |||| | ||||||||||  |  ||||  ||| | ||||||||||||||| ||||||||||||    
T  21984706 acttttccagtgttctgcaatatctaggcgagttagagtccttg-aaacaacttttgacactttaagttccctctcctgatgaactgtagcttctggtga 21984804  T
Q  202 ttcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    | |||| ||||| ||||||||||||||||||||||||    
T  21984805 tacacagcttctgatgaacttgcttctgatgacgtca 21984841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 21121136 - 21120898
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||  |||||     
T  21121136 acagagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcagaatagtcgttgcc 21121037  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
    ||| |||||||||||||||| |||| |||| ||||| |  |||| | ||||| | ||| ||| ||||  ||| |||||||||||||||||||||||||||    
T  21121036 atatttttccagtcttctgcgatttctaggtgagttagagtccttg-aaacagcttttgaaaactttaagttccatctcctgatgaactgcagcttctgg 21120938  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||| ||||||||||||||||||    
T  21120937 tgatacacagcttctgatgaatttgcttctgatgacgtca 21120898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 238
Target Start/End: Original strand, 42284645 - 42284872
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttc 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||| |  ||| | | |||||    
T  42284645 tggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgcatttcaaaatag-tcgtgccacaattttc 42284743  T
Q  110 cagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaa 208  Q
    |||||||||||||| |||||||||||| |  |||| | ||||| ||||  ||  |||  |||  |||| ||||||||||||||||||||||||| ||||     
T  42284744 cagtcttctgcaatctttaggcgagttagagtccttg-aaacagcttttgaaaatttaagttcaatcttctgatgaactgcagcttctggtgatacacag 42284842  T
Q  209 cttctaatgaacttgcttctgatgacgtca 238  Q
    ||||| ||||||||||||||||||||||||    
T  42284843 cttctgatgaacttgcttctgatgacgtca 42284872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37642256 - 37642494
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||| ||||||| ||||||||||     
T  37642256 acagagtagtggaagtagtggttgtacacttcgtataaacgtactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagctgttgcc 37642355  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||| ||||||||||||| ||||| |||||||||| |  |||| | ||||| ||||  || ||||| |||  || ||||||||||||||||||||||||    
T  37642356 acactcttccagtcttctgtaatttctaggcgagttagagtccttg-aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggt 37642454  T
Q  200 gattcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    |||  | | ||||| |||||| |||||||| |||||||||    
T  37642455 gatatatagcttctgatgaactttgcttctaatgacgtca 37642494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 30572205 - 30572430
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||  || ||||| ||||||||||         |||||||||||    
T  30572205 acagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttcaaaata 30572304  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    || ||||||||||||||||||||||||||||| | || |||||||| ||||| |||| || || |  |||||||  |||  ||||||||||||||||||     
T  30572305 gccgttgctatacttttccagtcttctgcaatctcagacgagtttgaatccttgaaa-cagctattgaagctttaagttgtatctcctgatgaactgcaa 30572403  T
Q  192 cttctggtgattcacaacttctaatga 218  Q
    |||||||||||||||||||||| ||||    
T  30572404 cttctggtgattcacaacttctgatga 30572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 48570303 - 48570063
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||         |||||||    
T  48570303 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaatccttccaaaata 48570204  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    |  |||| |||||||||| ||||||||||||| |||| |||||||| ||||    ||||| ||||  || ||||  ||| |||||||||||||| | |||    
T  48570203 gtcgttgttatacttttctagtcttctgcaatcttagacgagtttgaatcc-gttaaacagcttttgaaactttaagttgcatctcctgatgaattacag 48570105  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||| || ||||| || || |||||| ||||||    
T  48570104 cttctggtgattctcagcttctgataaaattgcttatgatga 48570063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44821617 - 44821371
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaata 91  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||| |||||          |||||||    
T  44821617 acagagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaatccttccaaaata 44821518  T
Q  92 gctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  |||||||||||||| ||||||||| |||   |||| |||||||| |||||  ||| |||||||  |||||||  ||| |||||||||||||||| ||    
T  44821517 gtcgttgctatactttttcagtcttctacaaaccttagacgagtttgaatcctttaaa-caacttttgaagctttaagttgcatctcctgatgaactaca 44821419  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| ||||||||| || ||||| || |||||||||||||||||||||    
T  44821418 gcttatggtgattctcagcttctgataaacttgcttctgatgacgtca 44821371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 25448638 - 25448395
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||         ||||||||||||    
T  25448638 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaata 25448539  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaact--g 188  Q
    |  | ||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||| ||||||||||  |    
T  25448538 gtcgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatcttctgatgaactgcg 25448440  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||| ||||||| || ||||| || ||||||||| ||||||    
T  25448439 cagcttctagtgattctcagcttctgataaacttgcttttgatga 25448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 35040174 - 35040420
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |  ||||||||||||         ||||||||||||    
T  35040174 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcctttcaaaata 35040273  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  |||||| |||||||| ||||||||||||| ||||| |||| ||| |||| |  ||||||||||  |||| ||  ||| |||| | ||||||| ||||    
T  35040274 gtcgttgctttacttttctagtcttctgcaatctttagacgaggttggatcc-attaaacaacttttgaagccttaagttgcatcccatgatgaattgca 35040372  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||     ||||| || |||||||||||||||||||||    
T  35040373 gcttctggtgatttttggcttctgataaacttgcttctgatgacgtca 35040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 2327511 - 2327270
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||  || |||||||||||||         |||||||||||    
T  2327511 cagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctcttttgaggaacaagcatccaatgcgttcgaatcctttcaaaata 2327412  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | | |||||  |||||| ||||| |||||||| ||||| |||||||| ||| ||  ||||||||||  |||||||  ||| |||||||||||||||||||    
T  2327411 gtttttgcttcactttttcagtcatctgcaatctttagacgagtttgaatc-tattaaacaacttttgaagctttaagttgcatctcctgatgaactgca 2327313  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||     ||||| || ||||||||||||||||    
T  2327312 gcttctggtgatttttggcttctgataaacttgcttctgatga 2327270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 23024796 - 23024987
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| || || |||||||||||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||  ||||||    
T  23024796 acagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgct 23024895  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    | ||||| | |||||||||||||||  |||||| ||  ||||| | ||||| ||||  ||||||| |||| ||| | | ||||| |||||||||    
T  23024896 a-actttccaagtcttctgcaatttctggcgagattaaatccttg-aaacagcttttgaagctttaggttgcattttccgatgacctgcagctt 23024987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 2834698 - 2834943
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| |||||  |||||||||||| ||||||||| |||||| |||||||| | |||||| || ||||||||||||||||         ||||| ||    
T  2834698 acagagtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaaatcctttcaaatta 2834797  T
Q  92 gctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || ||||||  |||||| ||||||||  ||||  |||| |||| ||| |||| |   |||||||||  |||||||  ||| ||||||| |||||||||||    
T  2834798 gccgttgcttcactttttcagtcttcaacaatgcttagacgagattgaatcc-attgaacaactttggaagctttaagttgcatctcccgatgaactgca 2834896  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||  || ||||||||| ||||||||||||||||||||    
T  2834897 gcttctggtgattttcagcttctaatg-acttgcttctgatgacgtca 2834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19215620 - 19215818
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| || || ||||||||||||||||||||||| |  ||||||||||||||  ||||  |||||||||| ||||| |||||||||||| |||| |    
T  19215620 acagagtagtgcagatagtggttgtacacttcgtacaatcacactatgtcaacgctccttgaggaataagcatcaaatgcttttcaaaatagccgttgtt 19215719  T
Q  101 atacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||| ||||  ||||||| | ||  |||| ||||||| ||||||||||||||    
T  19215720 a-actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacagcttttgaagctttagatt-gatcttctgatgatctgcagcttctggt 19215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36134198 - 36134326
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg--------cctttcaaaatag 92  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||        |||||||||||||    
T  36134198 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcttcaaatcctttcaaaatag 36134297  T
Q  93 ctgttgctatacttttccagtcttctgca 121  Q
     |||||||  |||||||||||||||||||    
T  36134298 ttgttgctccacttttccagtcttctgca 36134326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 229
Target Start/End: Complemental strand, 22427425 - 22427192
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 95  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||||||| || || ||||||||||||         ||||||||| |||  |    
T  22427425 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttttaagaacaagcatccaatgccttcaaatcctttcaaactagtcg 22427326  T
Q  96 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    |||||  |||||||||||||||||||||  |||| |||| ||  || |||   ||||   ||  |||||||  ||| ||||||||||||||||| |||||    
T  22427325 ttgcttcacttttccagtcttctgcaatgcttagacgagattaaat-ctattgaacagtctttgaagctttatgttgcatctcctgatgaactggagctt 22427227  T
Q  195 ctggtgattcacaacttctaatgaacttgcttctg 229  Q
    |||||||||  || ||||| |||||||||||||||    
T  22427226 ctggtgattttcagcttctgatgaacttgcttctg 22427192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22600254 - 22600172
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  22600254 acagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 22600172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39201064 - 39200818
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| ||    
T  39201064 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaacta 39200965  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || ||||||  ||| || ||||||||||||||  |||   ||| ||  |||| |   |||| ||||  |||||||  ||| |||||||| ||||||||||    
T  39200964 gccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatcc-attgaacagcttttgaagctttatgttgcatctcctaatgaactgca 39200866  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| ||||||||  || ||| | |||||||||||| |||||||||||    
T  39200865 gcttttggtgattttcagcttttgatgaacttgcttttgatgacgtca 39200818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 7745161 - 7744952
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatag 92  Q
    ||||||| ||||| |||||||||||||||| ||| ||||||||| |||||||||| ||||||  ||||||||| ||||         ||||||||| ||     
T  7745161 cagagtagtggaggtagtggttgtacactttgtataaacgtactttgtcaacgctctttgaaggataagcatcaaatgcattcaaatcctttcaaattaa 7745062  T
Q  93 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    |||||||||  ||| | ||||||| |||| | |||||  ||||||| |||| |  ||||||||||  || || | |||| ||||| ||||||||||||||    
T  7745061 ctgttgctactcttcttcagtcttatgcactctttagatgagtttgaatcc-attaaacaacttttgaaactgtaggttgcatcttctgatgaactgcag 7744963  T
Q  192 cttctggtgat 202  Q
    |||||||||||    
T  7744962 cttctggtgat 7744952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 22464879 - 22464643
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 93  Q
    |||||| ||||| |||||| |||||||||||||||   ||||| |||||||||| |||||| || ||||||||||||||         ||||||| |||     
T  22464879 agagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaattagt 22464780  T
Q  94 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
     ||||||  |||||||||||||||||||||  ||||  ||| ||  |||| | ||| | | ||||  |||||||  ||||||||||||||||||||| ||    
T  22464779 cgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaaca-accttttgaagctttatgttacatctcctgatgaactgtag 22464681  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctg 229  Q
    | ||||||||||  || ||||| |||||||||||||||    
T  22464680 catctggtgattttcagcttcttatgaacttgcttctg 22464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1900353 - 1900436
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| |||||| || |||||| ||||||||||    
T  1900353 acagagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctttgaagaacaagcattcaatgccttt 1900436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14263523 - 14263441
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||||||||||||||||||||||| || || ||||||| |||||  || ||| ||||||||||||    
T  14263523 acagagtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctttgaggaacaagtatccaatgcctt 14263441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 32786005 - 32785927
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  32786005 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaagcatccaatgcctt 32785927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 35401821 - 35401899
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 35401899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 22201805 - 22201677
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 94  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||   | || ||||||||||||         ||||||||||||| |    
T  22201805 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcatagaacaagcatccaatgccttcaaatcctttcaaaatagtt 22201706  T
Q  95 gttgctatacttttccagtcttctgcaat 123  Q
    |||||| ||||||| ||||||||||||||    
T  22201705 gttgctttactttttcagtcttctgcaat 22201677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 28492473 - 28492394
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  28492473 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaagcatccaatgcctt 28492394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 38282575 - 38282657
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||| ||||| ||||||||||| |||||||||||  ||||| |||||||||| |||||| || |||||| ||||||||||    
T  38282575 acagagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctttgaagaacaagcattcaatgccttt 38282657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2268539 - 2268621
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| | ||| |||||||||||||||||||||||  ||||| |||||||||| |||||  || |||||| |||||||||    
T  2268539 acagagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgacgaacaagcattcaatgcctt 2268621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7309827 - 7309908
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||| || ||||| ||||||| ||  |||||||||||||||    
T  7309827 acagagtattggaggtagtggttgtacacttcgtacaattgtactacgttaacgc-ttttgaagaacgagcatccaatgcctt 7309908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21191937 - 21191855
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| || ||||||| ||  || || ||||||||||||||||    
T  21191937 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcatccaatgcctt 21191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29215805 - 29215887
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||| |||||||||||||||||  ||||| ||| | |||| |||||| || ||||||||||||||||    
T  29215805 acagagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgcctt 29215887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 21544191 - 21544268
Alignment:
Q  162 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||| ||||    
T  21544191 ctttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgatgtca 21544268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22153865 - 22153920
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  22153865 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 22153920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 33256420 - 33256341
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||  ||  || || ||||||||||||||||    
T  33256420 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcctt 33256341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 33276592 - 33276513
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||  ||  || || ||||||||||||||||    
T  33276592 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcctt 33276513  T

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Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 12284440 - 12284510
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  12284440 tggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 12284510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 19170242 - 19170181
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||| ||||||||||| |||||||||||||  | | ||||| |||||||||||||||||||    
T  19170242 catcttctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttctgatga 19170181  T

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Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 19717541 - 19717614
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||| ||||||||||||||||||  ||||| |||||||||| ||  || || |||||||| |||||||    
T  19717541 tggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccgatgcctt 19717614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 20954542 - 20954466
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || ||||||| ||||||||    
T  20954542 gagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaataagcctccaatgc 20954466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 32785828 - 32785764
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgt 236  Q
    |||||| ||||||||| || ||||| ||||||  || |||||||||||||||||||| |||||||    
T  32785828 catctcatgatgaactacaacttctagtgattttcagcttctaatgaacttgcttctaatgacgt 32785764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 2267101 - 2267228
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagctg 95  Q
    |||| ||||| ||||||||||||||||| |||||  | ||| || ||||||| |||||| || || ||||||||||         |||||||| ||| ||    
T  2267101 agtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctttgaagaacaaacatccaatgccttcaaattctttcaaactagttg 2267200  T
Q  96 ttgctatacttttccagtcttctgcaat 123  Q
    |||||  |||||||||||||||||||||    
T  2267201 ttgcttcacttttccagtcttctgcaat 2267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 16235365 - 16235286
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| ||||||| || |||| | || |||||| |||||||||    
T  16235365 gagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctttggagaacaagcattcaatgcctt 16235286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 30893104 - 30893155
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||| ||||    
T  30893104 agtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgct 30893155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 28492294 - 28492228
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||||| || ||||||  |||   || ||||| ||||||||||||||||||||||||    
T  28492294 catctcctgatgaactacaacttctgaagatcttcagcttctgatgaacttgcttctgatgacgtca 28492228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 34255587 - 34255501
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaa 88  Q
    ||||||| ||||  ||||||||||||| |||||||| ||  || ||||||||||| |||||  |  ||||||||||||| |||||||    
T  34255587 cagagtagtggaagtagtggttgtacagttcgtacatactcacaatgtcaacgctctttgaggataaagcatccaatgcttttcaaa 34255501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 17025027 - 17024954
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| |||||||||||||||||||||||  ||  | | |||||||| ||| || || ||||||||||||||||    
T  17025027 tggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctttaaagaacaagcatccaatgcctt 17024954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 238
Target Start/End: Complemental strand, 25448389 - 25448360
Alignment:
Q  209 cttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||||||||||||||||    
T  25448389 cttctaatgaacttgcttctgatgacgtca 25448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 1577878 - 1577954
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||| ||||||   |||| |||||||||| ||  || || |||||||||||||    
T  1577878 gagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctcttaaaagaacaagcatccaatgc 1577954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 12613633 - 12613605
Alignment:
Q  210 ttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||||||||||||||||||    
T  12613633 ttctaatgaacttgcttctgatgacgtca 12613605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 23036589 - 23036521
Alignment:
Q  11 ggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 79  Q
    |||| |||||||||||||||||||||||  || || |||  ||||| |||||| || ||||||||||||    
T  23036589 ggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctttgaagaacaagcatccaatg 23036521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1857 - 1621
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||| |||||     
T  1857 acagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgcc 1758  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||  |||||||  ||| ||||||||||||||||| |||||||||||    
T  1757 atacttttccagtcttctgcaatgttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactgtagcttctggtg 1659  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |  |||| ||| |  |||||||||||||||||||||||    
T  1658 aaacacagcttttggtgaacttgcttctgatgacgtca 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 757 - 552
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  757 acagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 658  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  ||||||||||||||||||||| ||||| |||||||| |||| |  ||||| |||   |||||||  ||| |||||||||||||||||||    
T  657 gtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-atcaaacagcttctgaagctttaagttgcatctcctgatgaactgca 559  T
Q  191 gcttctg 197  Q
     ||||||    
T  558 ccttctg 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 25767 - 25535
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||     
T  25767 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgcatttcaaaatatctgttgcc 25668  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| | ||||||||||  || ||||  ||| ||||||||||||||||||||||||||||    
T  25667 atacttttccagtcttttgcaatttctaggcgagtttgaatccttg-aaacaacttttgaaactttaagttgcatctcctgatgaactgcagcttctggt 25569  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| || | ||||| ||||| |||||||||||||    
T  25568 gatacatagcttctgatgaagttgcttctgatga 25535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 34906 - 34669
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||   |||||     
T  34906 acagagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatattcgttgcc 34807  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||  || ||||  ||| |||||||||| |||||||||||||| ||    
T  34806 atacttttccagtcttctgcaatttctaggcgagtttgaatccttg-aaacaacttttgaaactttaagttgcatctcctgaagaactgcagcttctagt 34708  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||| |||| ||||| ||||||||||||||||||||||||    
T  34707 gatacacagcttctgatgaacttgcttctgatgacgtca 34669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 6407727 - 6407963
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||| ||||      
T  6407727 acagagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagccgttgta 6407826  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||| |||| |||||||| |||||   ||||| ||||  |||||||  ||| |||||||||||||||||||||||||||||    
T  6407827 atacttttccagtcttctgcaatcttagacgagtttgaatcct-ttaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtg 6407925  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  6407926 attcacaacttctgatgaacttgcttttgatgacgtca 6407963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 14989601 - 14989364
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||| |||| |    
T  14989601 acagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgtt 14989502  T
Q  101 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||| ||||| ||||| || || |||||||| |||||   ||||  ||||  |||||||  ||| |||||||||||||| |||||||||||||    
T  14989501 atacttttccaatcttcagcaatcttcagacgagtttgaatcct-ttaaacggcttttgaagctttaagttgcatctcctgatgaattgcagcttctggt 14989403  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  14989402 gattcacagcttctgatgaacttgcttctgatgacgtca 14989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 13430778 - 13430540
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||| ||||      
T  13430778 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagccgttgtc 13430679  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
    ||||||||| | ||||||||||||| |||||||||| |  |||| | ||||| | ||| ||| ||||  ||| ||||||||||||||||| |||||||||    
T  13430678 atacttttctaatcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaaaactttaagttccatctcctgatgaactgtagcttctgg 13430580  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||||||||||||||||||||||    
T  13430579 tgatacacagcttctgatgaacttgcttctgatgacgtca 13430540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 43639784 - 43640016
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||  ||||||||||| |||||| ||||||||| ||||||||||||||||||  ||||      
T  43639784 acagagtagtggagatagtggttgtacacttcgtgcaaacgtaacatgtcaacgctctttgaaaaataagcattcaatgcctttcaaaatagtcgttgtc 43639883  T
Q  101 atacttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||| | ||||||||||  |||||||  ||| |||||| |||||||||||| ||||||||    
T  43639884 atacttttccagtcttttgcaatttttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcatgatgaactgcatcttctggt 43639982  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| |||| ||||| ||||  |||||||||||||    
T  43639983 gatacacagcttctgatgattttgcttctgatga 43640016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 21301024 - 21301260
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 101  Q
    ||||||| ||||  |||||||||||||||| |||||||||||||||||||||||| |||||  | |||||||||||||| |||||||||||| ||||| |    
T  21301024 cagagtagtggaagtagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgcca 21301123  T
Q  102 tacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    |||||||||| ||||||||||| |||||||||||| |  || | | ||||| ||||  || ||||| |||  || |||||||||||||||||||||||||    
T  21301124 tacttttccaatcttctgcaatctttaggcgagttagagtcattg-aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtg 21301222  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    || |||| ||||| ||||||||||||||||||| ||||    
T  21301223 atacacagcttctgatgaacttgcttctgatgatgtca 21301260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 18151796 - 18151569
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||| |||  |||| |    
T  18151796 acagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgccttccaaattagtcgttgtt 18151697  T
Q  101 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||||||||||||| || || |||||||| |||           ||||  |||||||  ||| ||||| ||||||||||||| ||||||||    
T  18151696 atacttttccagtcttctgcaatcttcagacgagtttgaatc-----------cttttgaagctttaagttgcatcttctgatgaactgcaacttctggt 18151608  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  18151607 gattcacagcttctgatgaacttgcttctgatgacgtca 18151569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 21288419 - 21288641
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||  | |||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  21288419 tagtggttgtacacttcgtacaaacgaactatgtcaacgctctttgaggagtaagcatccaatacatttcaaaatagccgttgccatacttttccagtct 21288518  T
Q  116 tctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttcta 214  Q
    |||||||| |||||||||||| | |  | |  |||||| |||  || ||||| |||  || ||||||||||||||||||| ||||||| |||| |||||     
T  21288519 tctgcaatctttaggcgagttag-agtcaatgaaacaaattttgaatctttgagttcaatttcctgatgaactgcagcttgtggtgatacacagcttctg 21288617  T
Q  215 atgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||||||||||    
T  21288618 atgaacttgcttctgatgacgtca 21288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 40845537 - 40845296
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||         |||| |||||||    
T  40845537 acagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatccttccaaaata 40845438  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||||||||||||||||| ||||| |||||||| |||||   ||||||||||  |||||||  | | ||||||||||||||||  |    
T  40845437 gtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcct--taaacaacttttgaagctttaagctgcatctcctgatgaactata 40845340  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||| ||  | ||||| || |||||||||||||||||    
T  40845339 gcttctggtgagtcttagcttctgataaacttgcttctgatgac 40845296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 15336238 - 15335996
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||         ||||||||||||    
T  15336238 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaata 15336139  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||  |||||||||||||| ||||| |||||||| || | |  ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  15336138 gtcgttgcttcactttctcagtcttctgcaatctttagacgagtttg-attccattaaacaacttttgaagctttaagttgcatctcctgatgaactaca 15336040  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||||||||||| || ||||| || |||||||||||||||||    
T  15336039 gcttctggtgattctcagcttctgataaacttgcttctgatgac 15335996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 15425303 - 15425061
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||         ||||||||||||    
T  15425303 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaata 15425204  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||  |||||||||||||| ||||| |||||||| || | |  ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  15425203 gtcgttgcttcactttctcagtcttctgcaatctttagacgagtttg-attccattaaacaacttttgaagctttaagttgcatctcctgatgaactaca 15425105  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||||||||||| || ||||| || |||||||||||||||||    
T  15425104 gcttctggtgattctcagcttctgataaacttgcttctgatgac 15425061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 15516607 - 15516365
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||         ||||||||||||    
T  15516607 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaata 15516508  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||  |||||||||||||| ||||| |||||||| || | |  ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  15516507 gtcgttgcttcactttctcagtcttctgcaatctttagacgagtttg-attccattaaacaacttttgaagctttaagttgcatctcctgatgaactaca 15516409  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||||||||||| || ||||| || |||||||||||||||||    
T  15516408 gcttctggtgattctcagcttctgataaacttgcttctgatgac 15516365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 1745160 - 1745398
Alignment:
Q  1 acagagtaatggagttagtggttgtacactt-cgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgc 99  Q
    |||||||| ||||  |||| ||||||||||| |||||| |||||||||||||||||  ||||||  || |||||||||||| ||||||| |||| |||||    
T  1745160 acagagtagtggaagtagttgttgtacactttcgtacagacgtactatgtcaacgcactttgaagtattagcatccaatgcatttcaaactagccgttgc 1745259  T
Q  100 tatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
     | ||| ||| ||||||||| ||||| |||||||||  |  |||| |||| |||||||  ||   ||| ||| |||||| ||||||||||||||||||||    
T  1745260 cacactcttctagtcttctgtaatttctaggcgagtaagagtccttgaaa-caacttttgaaaacttgagttccatctcttgatgaactgcagcttctgg 1745358  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||||||||||||||||||||||    
T  1745359 tgatacacagcttctgatgaacttgcttctgatgacgtca 1745398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 33560359 - 33560173
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||||||| ||||||| |||| ||||| | ||| |||||||||    
T  33560359 tagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtct 33560260  T
Q  116 tctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgat 202  Q
    |||| ||||| |||||||||| |  |||| | ||||||||||  ||   ||| ||| |||||| ||||||||||||||||||||||||    
T  33560259 tctgtaatttctaggcgagttagagtccttg-aaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttctggtgat 33560173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 233
Target Start/End: Original strand, 22673783 - 22674020
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 95  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         |||| |||||||| ||    
T  22673783 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatccttccaaaatagatg 22673882  T
Q  96 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    |||||||||||||| ||||||||||||| |  || |||||||| ||||    ||||||||||  |||||||  ||| ||||||| |||||||| || |||    
T  22673883 ttgctatacttttctagtcttctgcaatctccagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctccggatgaactacaactt 22673981  T
Q  195 ctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||   || ||||| || ||||||||||||||||    
T  22673982 ctggtgatcttcagcttctgataaacttgcttctgatga 22674020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 36105196 - 36105437
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||| | ||||| |||||||||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||||         |||| |||||||    
T  36105196 acagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaata 36105295  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || |||| |||||||||||| ||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||||||||||||||  |    
T  36105296 gccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactata 36105394  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||  || ||||| || ||||||||||||||||    
T  36105395 gcttctggtgattttcagcttctgataaacttgcttctgatga 36105437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 22663119 - 22663358
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagc 93  Q
    |||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         | || ||||||||     
T  22663119 agagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatctttccaaaatagt 22663218  T
Q  94 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 192  Q
    |||||||||| ||||||||||||||||||| || || |||||||| ||||    ||||| ||||  |||||||  ||| |||||||| ||||||| || |    
T  22663219 tgttgctatatttttccagtcttctgcaatcttcagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctaatgaactacaac 22663317  T
Q  193 ttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||| |||||   || |||||||| ||||||||||||||||    
T  22663318 ttctagtgatcttcagcttctaataaacttgcttctgatga 22663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 9320569 - 9320812
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| ||||||||||||||||||||||||  |||| |||||||||| ||||||| |||||||||||||||         |||||||||||    
T  9320569 acagagtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgttcaaatcctttcaaaat 9320668  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    |  |||||||  ||||||||||||||||||||| ||||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||    
T  9320669 aattgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaagttgcatcctctgatgaactgc 9320768  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||||   | ||||| || ||||||||||||||||    
T  9320769 agcttctggtgatttttagcttctgataaacttgcttctgatga 9320812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23185376 - 23185134
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||| | ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| |||||||||||||||         ||||||||| ||    
T  23185376 acagagcagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaacta 23185277  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||||||||||||||||||  |||| |||| ||  |||| |   |||||| ||  |||||||  ||| |||||||||||||||||||    
T  23185276 gtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatcc-attgaacaacctttgaagctttatgttgcatctcctgatgaactgca 23185178  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||||||||||  || ||||| ||||||||||||||||||||    
T  23185177 gcttctggtgattttcagcttctgatgaacttgcttctgatgac 23185134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 24551279 - 24551486
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctg 95  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||         |||||||||||  |    
T  24551279 agtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcg 24551378  T
Q  96 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    |||||  ||||||||||||||||||||| ||||| |||| ||| |||| |  ||||||||||  |||| ||  ||| |||| | ||||||||||||||||    
T  24551379 ttgcttcacttttccagtcttctgcaatctttagacgaggttgaatcc-attaaacaacttttgaagccttaagttgcatcccatgatgaactgcagctt 24551477  T
Q  195 ctggtgatt 203  Q
    |||||||||    
T  24551478 ctggtgatt 24551486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 45538589 - 45538378
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||  | |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  45538589 acagagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaaata 45538490  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | |||||||  ||||||||||||||||||||| ||||| |||| ||| |||| |  ||||||||||  |||| ||  ||| |||| | ||||||||||||    
T  45538489 gttgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatcc-attaaacaacttttgaagccttaagttgcatcccatgatgaactgca 45538391  T
Q  191 gcttctggtgatt 203  Q
    |||||||||||||    
T  45538390 gcttctggtgatt 45538378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 17797423 - 17797664
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||| ||    
T  17797423 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcctttcaaacta 17797522  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || |||||   ||||||||||||||||| |||  |||| |||| ||| |||| |   |||||||||  | |||||  ||| ||||||||||||| |||||    
T  17797523 gccgttgcatcacttttccagtcttctgtaatggttagacgagattgaatcc-attgaacaacttttgaggctttaagttgcatctcctgatgagctgca 17797621  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||  || ||||| |||||||||||||||||||    
T  17797622 gcttctggtgattttcagcttctgatgaacttgcttctgatga 17797664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 24833205 - 24832960
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 92  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||  || ||||||||||||         || |||||| |||    
T  24833205 agagtaatggaggtagtggttgtacacttcgtacaaacgtaccatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcccttcaaagtag 24833106  T
Q  93 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    |  |||||  |||||| ||||||||||||||  |||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||||    
T  24833105 ccattgcttcactttt-cagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcag 24833007  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||   | |||||||| |||||||||||||||||||||    
T  24833006 cttctggtgatttttagcttctaataaacttgcttctgatgacgtca 24832960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16207307 - 16207438
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  16207307 acagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 16207406  T
Q  92 gctgttgctatacttttccagtcttctgcaat 123  Q
    |  |||||| |||| |||||||||||||||||    
T  16207407 gtagttgctttactcttccagtcttctgcaat 16207438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 16188988 - 16189067
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| || ||| |||||||||||||||||||    
T  16188988 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgcctt 16189067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 3598341 - 3598254
Alignment:
Q  147 aaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||  |||||||  ||| |||||||||||||||| || ||||||||||||| || ||||| |||||||||||| |||||||    
T  3598341 aaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgatgac 3598254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1237638 - 1237720
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||| |||||||||| |||||| || ||  ||||||||||||    
T  1237638 acagagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctttgaagaacaaatatccaatgcctt 1237720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 23263753 - 23263680
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  23263753 tggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 23263680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 19943236 - 19943368
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa-taataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| |||||||||||||||||||||||   |||| |||||||||||||| ||  || ||||||||||||         |||||||||||    
T  19943236 acagagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatcctttcaaaat 19943335  T
Q  91 agctgttgctatacttttccagtcttctgcaat 123  Q
    || |||||||  ||| |||||||||||||||||    
T  19943336 agttgttgcttcactcttccagtcttctgcaat 19943368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 21932887 - 21932967
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    ||||| ||||| |||||||||||||||||||||||   |||| |||||||||| |||||| || |||||| ||||||||||    
T  21932887 gagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctttgaaaaacaagcatacaatgccttt 21932967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 12757910 - 12757831
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  12757910 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 12757831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 17441954 - 17441827
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg--------cctttcaaaatagctg 95  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || |||||||||||||||        |||||||||||||  |    
T  17441954 gagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgcttcaaatcctttcaaaatagtcg 17441855  T
Q  96 ttgctatacttttccagtcttctgcaat 123  Q
    ||||| || | |||||||||||||||||    
T  17441854 ttgctttagtcttccagtcttctgcaat 17441827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 24646342 - 24646420
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct 82  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||| || ||  || ||||||||||||||||||    
T  24646342 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcct 24646420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45568051 - 45567969
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| || || ||||||| |||||||||||||| | ||||| |||||||||| ||||||  |||| |||||||||||||    
T  45568051 acagagtagtgaaggtagtggtcgtacacttcgtacagaagtactttgtcaacgctctttgaaggataatcatccaatgcctt 45567969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 43774053 - 43774110
Alignment:
Q  176 tcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||| |||||||||||||| || | ||||| |||||||||||||||||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgatga 43774110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 602867 - 602791
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  602867 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 602791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 18679831 - 18679895
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  18679831 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 18679895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 18719005 - 18719081
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||| ||||||| ||  || || |||||||||||||    
T  18719005 gagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaacaagcatccaatgc 18719081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 39693539 - 39693615
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  39693539 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 39693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 16681438 - 16681371
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||| ||||||||    
T  16681438 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatctaatgcctt 16681371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 19156200 - 19156279
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  19156200 gagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 19156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 33082873 - 33082940
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  33082873 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 33082940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18685547 - 18685465
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  18685547 acagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18722796 - 18722714
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  18722796 acagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18722714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18731141 - 18731059
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  18731141 acagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18731059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 20382535 - 20382489
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  20382535 tggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 20382489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 45292842 - 45292876
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  45292842 tagtggttgtacacttcgtacaaacgtactatgtc 45292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30421579 - 30421496
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttg--aataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||||||| ||||||||| || ||||| |||||||||| ||||  || || ||||||||||||||||    
T  30421579 acagagtagtggaggtagtggttgtaaacttcgtac-aatgtactttgtcaacgctctttgaaaagaacaagcatccaatgcctt 30421496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 23271105 - 23271038
Alignment:
Q  173 atctcctgatgaactgcagcttctggtgattcacaacttctaatgaac--ttgcttctgatgacgtca 238  Q
    |||| ||||| ||||| |||||||||||||||| | ||||| ||||||  ||||||||||||||||||    
T  23271105 atcttctgatcaactgtagcttctggtgattcatagcttctgatgaacttttgcttctgatgacgtca 23271038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 17914463 - 17914542
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  17914463 gagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgcctt 17914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 21933066 - 21933125
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgat 231  Q
    |||||||||||||| |  ||||||||||||||  || ||||| |||||||||||||||||    
T  21933066 catctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgat 21933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 43644900 - 43644979
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| | | |||||| ||  || || ||||||||||||||||    
T  43644900 gagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaacaagcatccaatgcctt 43644979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 12757731 - 12757665
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||  |||| ||||||||   || ||||| || |||||||||||||||||||||    
T  12757731 catctcctgatgaactagagctactggtgatcttcagcttctgatcaacttgcttctgatgacgtca 12757665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 19156379 - 19156445
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||| ||||||||| || |||||||||||   || ||||| ||||||||||||||||||| ||||    
T  19156379 catctcttgatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatgatgtca 19156445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 18321306 - 18321229
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc 81  Q
    ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||  ||  || || ||||||||||||||    
T  18321306 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcc 18321229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 25164074 - 25164123
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaac 53  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||| ||||    
T  25164074 gagtagtggagatagtggttgtacacttcgtacaattgtactatgacaac 25164123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 17267478 - 17267526
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaa 52  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||||||||||    
T  17267478 gagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaa 17267526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 17525864 - 17525800
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||||||||||| ||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  17525864 tagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 17525800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 18121236 - 18121176
Alignment:
Q  24 gtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||||||||||  ||||| ||| || ||| |||||| || |||||||||||||||||    
T  18121236 gtacacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgccttt 18121176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 30421411 - 30421367
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 203  Q
    |||||||  ||| ||||| ||||||||||||||||||||||||||    
T  30421411 aagctttatgttgcatcttctgatgaactgcagcttctggtgatt 30421367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28464471 - 28464235
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| |    
T  28464471 acagagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgtt 28464372  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||  ||||||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  |||  ||||||||||||||||||||||||||||    
T  28464371 atacttttttagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttgtatctcctgatgaactgcagcttctggtg 28464273  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||| ||||| || |||||||||||||||||||||    
T  28464272 attcacagcttctgataaacttgcttctgatgacgtca 28464235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 3245573 - 3245328
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa---------aata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||         ||||    
T  3245573 acagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattctttcaaaata 3245474  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    || ||||||||||||||||||||||||||||| |||| |||||||| ||||| |||| ||  |||  |||||||  ||| ||||||||||||||||||||    
T  3245473 gccgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa-cagttttggaagctttaagttgcatctcctgatgaactgcag 3245375  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||    
T  3245374 cttctggtgattcacagcttctgatgaacttgcttctaatgacgtca 3245328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 10848778 - 10849015
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||| |||     
T  10848778 acagagtagtggagatagtggttgtacactttgtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgcctttcaaaatagctgatgcc 10848877  T
Q  101 atacttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||| | ||||||||||  |||||||  ||| |||||| |||||||||||||||||||||    
T  10848878 atacttttccagttttctgcaatttttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcatgatgaactgcagcttctggt 10848976  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||| |||| ||| | |||||||||||| |||||| ||||    
T  10848977 gatacacagcttatgatgaacttgcttttgatgatgtca 10849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 35932138 - 35931900
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||  |||||     
T  35932138 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagtcgttgcc 35932039  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaac-tttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
    ||||||||||||||||||||||||| |||||||||| |  |||| | ||||||| ||| ||| ||||  ||| || ||| |||||||||| | |||||||    
T  35932038 atacttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacaacttttgaaaactttaagttccacctcttgatgaactgtaccttctgg 35931940  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||||||||| ||||||| ||||||||||||||||    
T  35931939 tgatacacaacttctgatgaactagcttctgatgacgtca 35931900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 25930288 - 25930076
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||  ||| |||| |||| |    
T  25930288 acagagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgccttctaaattagccgttgtt 25930189  T
Q  101 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||||||||||| |||||| ||||| |||||||| |||||   ||||||||||  |||||||  ||| |||||||||||||| |||||||||||||    
T  25930188 atacttttccagtcttatgcaatctttagacgagtttgaatcct-ttaaacaacttttgaagctttaagttgcatctcctgatgaattgcagcttctggt 25930090  T
Q  200 gattcacaacttct 213  Q
    |||||||| |||||    
T  25930089 gattcacagcttct 25930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 35986363 - 35986132
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttc-gtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    ||||||| ||||  ||||||||||||||||  ||||| |||||||||||||||||| |||||| |||| ||||||||||| |||||||||||  |||||     
T  35986363 cagagtagtggaagtagtggttgtacacttttgtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagtcgttgcc 35986264  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    | ||||||||||||||||||||||||||||||||| |  |||| | ||||| ||||  || ||||  |||  |||||||||||||||||| |||||||||    
T  35986263 acacttttccagtcttctgcaattttaggcgagttagagtccttg-aaacatcttttgaaactttaagttcaatctcctgatgaactgcaacttctggtg 35986165  T
Q  201 attcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||| ||||| |||||||||||||||||||    
T  35986164 attcacagcttctgatgaacttgcttctgatga 35986132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 9088974 - 9089190
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||  ||||      
T  9088974 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagtcgttgta 9089073  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    |||||||||||||||||| ||||  ||| ||||||||  ||||   ||||| ||||  || ||||  ||| |||||||||||||||||||||||||||||    
T  9089074 atacttttccagtcttcttcaatcatagacgagtttgattcct-ttaaacagcttttgaaactttaagttgcatctcctgatgaactgcagcttctggtg 9089172  T
Q  201 attcacaacttctaatga 218  Q
    ||||||| ||||| ||||    
T  9089173 attcacagcttctgatga 9089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 15516974 - 15517220
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||| |||| || |||||| |||||||||||||||||||          |||||||    
T  15516974 acagagtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaaata 15517073  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    || ||||||||||||||||||||||||||||| ||||| |||||||| |||| | |  |||||||||  |||||||  ||| ||||| |||||||||| |    
T  15517074 gccgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttg--aacaacttttgaagctttaagttgcatcttctgatgaactac 15517171  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    | ||||||||||||| |||||||| || |||||||||||||||| ||||    
T  15517172 aacttctggtgattctcaacttctgataaacttgcttctgatgatgtca 15517220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 4887027 - 4887273
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||| |||||| || ||||||||||||||         ||||||||||    
T  4887027 acagagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaata 4887126  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  |||||||||||||||||||||| |||||| || || | |||||  |||| |   |||||||||  |||||||  ||| ||| || ||||||||||||    
T  4887127 gtcgttgctatacttttccagtcttttgcaatcttaagacaagtttaaatcc-attgaacaacttttgaagctttaagttgcatatcttgatgaactgca 4887225  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  4887226 gcttctggtgattctcagcttctaatgaacttgcttctgatgacgtca 4887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 29138538 - 29138299
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||         |||| |||||||    
T  29138538 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaatccttccaaaata 29138439  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    | ||||||||||| |||||||||||||||||| |||| ||| |||| || ||   ||||| ||||  || ||||  ||| |||||||||||||||| ||     
T  29138438 gttgttgctatac-tttccagtcttctgcaatcttagacgattttgaat-ctgttaaacagcttttgaaactttaagttgcatctcctgatgaactacaa 29138341  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||| || ||||| || ||||||||||||||||    
T  29138340 cttctggtgattctcagcttctgataaacttgcttctgatga 29138299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 26759156 - 26759395
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt---------caaaatagc 93  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||| ||| |||| |||||| |||||||||||||||||||          ||||||||     
T  26759156 agagtagtggaggtagtggttgtacacttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagt 26759255  T
Q  94 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 192  Q
     |||| |||||||||||||||||||||||| ||||||||| |||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| || |    
T  26759256 cgttgttatacttttccagtcttctgcaatctttaggcgaatttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactacaac 26759354  T
Q  193 ttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||| || ||||| || || |||||||||||||    
T  26759355 ttctggtgattctcagcttctgataaatttgcttctgatga 26759395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 21660218 - 21660449
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 101  Q
    ||||||| ||||  ||||||||||||||||||||||||| ||||||||||||| | |||||  | |||||||||||||| ||| ||||||| |||||| |    
T  21660218 cagagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgatctttgaggactaagcatccaatgcatttgaaaatagttgttgcca 21660317  T
Q  102 tacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||| |||||||||||| ||||| |||||| |  |||| | ||||| ||||  || ||||| |||  || |||  |||||||| |||||||||||    
T  21660318 tacttttccggtcttctgcaatctttagacgagttagagtccttg-aaacagcttttgaaactttgagttcaatttccaaatgaactgtagcttctggtg 21660416  T
Q  201 attcacaacttctaatgaacttgcttctgatga 233  Q
    || || ||||||| |||| || |||||||||||    
T  21660417 atacataacttctgatgacctagcttctgatga 21660449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 30742985 - 30743226
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||         ||||||||||||    
T  30742985 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaaata 30743084  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
       |||||| | | |||||||||||||||||| ||||| |||||||| |||| |  ||||||||||  |||||||  ||| |||||||||||||||||||    
T  30743085 atcgttgctttgcctttccagtcttctgcaatctttagacgagtttgaatcc-attaaacaacttttgaagctttaagttgcatctcctgatgaactgca 30743183  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
     ||||| || |||| || ||| | || || |||||||||||||    
T  30743184 acttctcgtaattctcagcttatgataaatttgcttctgatga 30743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 11993893 - 11994134
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||| |||||||||| |||||| || ||||||||||||         || |||||| ||    
T  11993893 acagagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcccttcaaatta 11993992  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    || ||||||  ||| |||||||||||||||||  |||| |||||||| |||| | |  |||| ||||  || ||||  ||| |||||||||||||||| |    
T  11993993 gccgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttg--aacatcttttgaaactttaagttgcatctcctgatgaactac 11994090  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||||||| ||||| || ||||||||||||||||    
T  11994091 agcttctggtgattcacagcttctgataaacttgcttctgatga 11994134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26765503 - 26765649
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||         |||| |||||||    
T  26765503 acagagtagtggaggcagtggttgtacacttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaata 26765602  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttg 137  Q
    | |||||||||||||||||||||||||||||| ||||||||| ||||    
T  26765603 gttgttgctatacttttccagtcttctgcaatctttaggcgaatttg 26765649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 33933272 - 33933517
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  || ||||||||||||         |||||||||||    
T  33933272 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctcttttgaggaacaagcatccaatgcgtttaaatcctttcaaaat 33933371  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaac--tttcaaagctttgggttacatctcctgatgaact 187  Q
    || |||||||  |||||||||||||| ||||||  |||| |||| ||| |||| |  |||||||  |||  |||||||  ||| ||||  ||||||||||    
T  33933372 agttgttgcttcacttttccagtcttttgcaatccttagacgaggttgaatcccattaaacaacttttttgaagctttaagttgcatcctctgatgaact 33933471  T
Q  188 gcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| ||| ||||||||| || ||||| || ||||||||||||||||    
T  33933472 gcaacttatggtgattctcagcttctgataaacttgcttctgatga 33933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 42243685 - 42243928
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| |||||||||||||||||||||||||||| | |||||||||| |||| |  || || |||| ||||         |||||||||||    
T  42243685 acagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctcttttaaggaacaaacatcaaatgtcttcaaatcctttcaaaat 42243784  T
Q  91 agctgttgctatacttttccagtcttctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    || |||||||  |||||||||||||||||||| |||||| |||||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| |    
T  42243785 agttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactac 42243883  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||||||| ||  || | || || ||||||||||||||    
T  42243884 agcttctggtgattctcagtttttgataaatttgcttctgatgac 42243928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28139612 - 28139755
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||||||         ||||||||||||    
T  28139612 acagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatgtctttcaatcctttcaaaata 28139711  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtt 135  Q
    |  |||||||||||||| ||||||||| || | |||| ||||||    
T  28139712 gtcgttgctatactttttcagtcttctacattcttagacgagtt 28139755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 238
Target Start/End: Complemental strand, 30115853 - 30115762
Alignment:
Q  147 aaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||  |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  30115853 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatgacgtca 30115762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30115969 - 30115883
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa 87  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |||||| |||||    
T  30115969 acagagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcccttcaa 30115883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 14086671 - 14086427
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgcct---------ttcaaaat 90  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||| |         ||||||||    
T  14086671 acagagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaaatcacttcaaaat 14086572  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    ||| ||||||  |||||||||||||||||||||  |||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  ||||||||||||    
T  14086571 agccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgc 14086472  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||||||| |||   | ||| | || |||||||||||||||||    
T  14086471 agcttctggtaatttttagcttttgataaacttgcttctgatgac 14086427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 5429985 - 5430135
Alignment:
Q  89 atagctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaact 187  Q
    ||||||||||||  |||||| ||||||||||||||  |||  |||| ||| |||| | |||||| ||||  |||| ||  ||| ||||||||||||||||    
T  5429985 atagctgttgcttcactttttcagtcttctgcaatccttaaacgaggttgaatcccataaaacagcttttgaagccttaagttgcatctcctgatgaact 5430084  T
Q  188 gcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||   | ||||| ||||||||||||||||||||||||    
T  5430085 gcagcttctggtgatttttaccttctgatgaacttgcttctgatgacgtca 5430135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 23391735 - 23391535
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc-ctttcaaaatagctgttgc 99  Q
    |||||||| || || ||||| |||||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||  |||||||||||| ||||     
T  23391735 acagagtagtgcagatagtgattgtacacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttgt 23391636  T
Q  100 tatacttttccagtcttctgcaatttt--aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 197  Q
    || |||||   ||||||||||||||||   |||||| ||| ||||| | ||||| ||||  ||||||| ||||  ||||  |||||| ||||||||||||    
T  23391635 ta-actttcaaagtcttctgcaatttttctggcgagcttgaatccttg-aaacagcttttgaagctttaggtt-gatcttttgatgatctgcagcttctg 23391539  T
Q  198 gtga 201  Q
    ||||    
T  23391538 gtga 23391535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 33022673 - 33022915
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctg 95  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||         ||||| |||  |    
T  33022673 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaactagtcg 33022772  T
Q  96 ttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    |||||  |||||||||||||||||||||  ||||  ||| ||  |||| |   |||| | ||  |||||||  ||| |||||||||||||||||||  ||    
T  33022773 ttgcttcacttttccagtcttctgcaatgcttagatgagattaaatcc-attgaacagcctttgaagctttatgttgcatctcctgatgaactgcaaatt 33022871  T
Q  195 ctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||  || ||||| ||||||||||||||||||||||||    
T  33022872 ctggtgattttcagcttctgatgaacttgcttctgatgacgtca 33022915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 7745822 - 7745743
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  7745822 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 7745743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32160771 - 32160853
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||| |||||||||||||| |||| || |||||||||| ||||||  ||||||||||||||||||    
T  32160771 acagagtagtggaggtagtggtcgtacacttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgcctt 32160853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 642837 - 642757
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  642837 agagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaacaagcatccaatgcctt 642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 13545642 - 13545562
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||| ||||| | ||||||||||||||||||||   ||||| |||||||||| |||||| || ||||||||||||||||    
T  13545642 agagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 13545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 23413103 - 23413027
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  23413103 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaacaagcatccaatgc 23413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 26784362 - 26784434
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatcca 76  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || ||||||||||||    
T  26784362 gagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatcca 26784434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 21910564 - 21910643
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  21910564 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 41566563 - 41566484
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||| |||||||| ||  || ||||| |||||||||||||    
T  41566563 gagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaacatccaatgcctt 41566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20550900 - 20550981
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | |||||||||| ||| || || ||||||||||||||||    
T  20550900 acagagtagtggaggtagtggttgtacacttcgtacaattgta-tttgtcaacgctctttaaagaacaagcatccaatgcctt 20550981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 26784541 - 26784607
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||| |||||| ||||||||||||||   || ||||| ||||||||||||||||||||||||    
T  26784541 catctcctgctgaactacagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtca 26784607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 31117882 - 31118088
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||  |||||| |||||||||||||||   ||||| ||||||| || |||||| || |||||||||||||         |||||||| ||    
T  31117882 acagagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctttgaagaacaagcatccaatgccttcaaattctttcaaatta 31117981  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||||||||||||||||||  |||| |||||||  ||||   |||  | ||||  |||||||  ||| |||||||||||||||||||    
T  31117982 gtcgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatccgttaaacaaccttttgaagctttatgttgcatctcctgatgaactgca 31118081  T
Q  191 gcttctg 197  Q
    |||||||    
T  31118082 gcttctg 31118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 21072357 - 21072293
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  21072357 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 21072293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 19536429 - 19536378
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  19536429 agtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 19536378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 23478534 - 23478596
Alignment:
Q  167 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctg 229  Q
    |||| ||||| ||||||||||| |||||||||||||  ||| ||||| |||||||||||||||    
T  23478534 ggttgcatcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctg 23478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 89551 - 89503
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaa 52  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||    
T  89551 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaa 89503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 6499247 - 6499299
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  6499247 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 6499299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 12352924 - 12352872
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  12352924 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 12352872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 9398863 - 9398784
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  || | ||||||| |||||||||    
T  9398863 gagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagtaagcattcaatgcctt 9398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11208117 - 11208039
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| |||||||| ||||||||||||| | ||||| |||||||||| ||||||   | ||||||||||||    
T  11208117 acagagtagtggaggtagtggttatacacttcgtacata-gtactttgtcaacgctctttgaaggctgagcatccaatgc 11208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 21199132 - 21199053
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| ||||| |||||||||||||||||  ||||| ||||||||||||   || ||  |||||||||||||||    
T  21199132 gagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctttccaaagaacgagcatccaatgcctt 21199053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 41566384 - 41566321
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacg 235  Q
    |||||||||||||||| || |||||| ||||   || ||||| |||||||||||||||||||||    
T  41566384 catctcctgatgaactacaacttctgatgatcttcagcttctgatgaacttgcttctgatgacg 41566321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 23881076 - 23881154
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  | ||| |||||||||| ||  || |  ||||||||||||||||    
T  23881076 agtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaagcaagcatccaatgcctt 23881154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25096958 - 25096921
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaa 38  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  25096958 acagagtagtggaggtagtggttgtacacttcgtacaa 25096921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25154928 - 25154891
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaa 38  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  25154928 acagagtagtggaggtagtggttgtacacttcgtacaa 25154891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 6512545 - 6512505
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  6512545 tagtggttgtacacttcgtacaattgtactttgtcaacgct 6512505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 17814976 - 17815028
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| ||||||||||||||| |||||||  ||||| ||||||||||    
T  17814976 gagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgct 17815028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 27871723 - 27871961
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctt-tttgaataataagcatccaatgcctttcaaaatagctgttgc 99  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||    
T  27871723 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaagaataagcatccaatgcatttcaaaatagccgttgc 27871822  T
Q  100 tatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
     ||||| |||||| |||||||||||| |||| || |||| ||||| |||| |||||||  |||||||  ||| ||| |||||||||||||||||||||||    
T  27871823 catactattccagacttctgcaatttctaggtgaatttgaatccttgaaa-caacttttgaagctttaagttgcatttcctgatgaactgcagcttctgg 27871921  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  27871922 tgattcacagcttctgatgaacttgcttctgatgacgtca 27871961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 14425452 - 14425688
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||| |||||     
T  14425452 acagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgcc 14425551  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    |||||| |||||||||||||||| ||||||||||||| ||||| | ||||||||||  |||||||  ||| ||||||||||||||||  |||||||||||    
T  14425552 atacttntccagtcttctgcaatgttaggcgagtttgaatccttg-aaacaacttttgaagctttaagttgcatctcctgatgaactntagcttctggtg 14425650  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |  |||| ||| |  |||||||||||||||||||||||    
T  14425651 aaacacancttttgntgaacttgcttctgatgacgtca 14425688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 48062973 - 48062741
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||     
T  48062973 acagagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgcc 48062874  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||||||||||||  |||||| |||||||||||| || || | ||||||||||  |||||||  ||| |||||| |||||||||||||||||||||    
T  48062873 atacttttccagtcttcgacaatttctaggcgagtttgaattcttg-aaacaacttttgaagctttaagttgcatctcttgatgaactgcagcttctggt 48062775  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| |||| ||||| ||| |||||||||||||||    
T  48062774 gatacacagcttctgatggacttgcttctgatga 48062741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 19339402 - 19339166
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 101  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||  ||||| |    
T  19339402 cagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgcca 19339303  T
Q  102 tacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
     ||||||||||||||||||||| |||||||||||| |  |||| | |||||  |||  || ||||  |||  ||||||||||||||||||||||||||||    
T  19339302 cacttttccagtcttctgcaatctttaggcgagttagagtccttg-aaacaggttttgaaactttaagttcaatctcctgatgaactgcagcttctggtg 19339204  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    || |||| ||||| |||||||||||||||| |||||||    
T  19339203 atacacagcttctgatgaacttgcttctgaggacgtca 19339166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 32264871 - 32264633
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctt-tttgaataataagcatccaatgcctttcaaaatagctgttgc 99  Q
    |||||| | ||||| || ||||||||||||  ||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||| |||||    
T  32264871 acagagcagtggaggtactggttgtacactctgtacaaacgtactatgtcaacgcttctttgaagaataaacatccaatgcatttcaaaatagccgttgc 32264772  T
Q  100 tatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctgg 198  Q
     ||||||||||||||||||||||||| |||||||||||| ||||| | ||| ||||||  |||||||  ||  |||||||||||||||||||||||||||    
T  32264771 catacttttccagtcttctgcaatttctaggcgagtttgaatccttg-aaataacttttgaagctttaagtcgcatctcctgatgaactgcagcttctgg 32264673  T
Q  199 tgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| |||||||| | |||| ||| |||||||||||||||    
T  32264672 tgatacacaacttttgatgatctttcttctgatgacgtca 32264633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 1293035 - 1293182
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  1293035 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgttgct 1293134  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaa 148  Q
    |||||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  1293135 atacttttccagtcttttgcaattttagtcgagtttgaatccttgaaa 1293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 21381581 - 21381344
Alignment:
Q  2 cagagtaatggagttagtggttgtacactt-cgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    ||||||| ||||  ||||||||||||| || |||||| |||||||||||||||||| |||||| |||| ||||||||||| |||||||||||| |||||     
T  21381581 cagagtagtggaagtagtggttgtacattttcgtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagccgttgcc 21381482  T
Q  101 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||||||||||||||||||||| |||||||||||| |  |||| | ||||||||||  || || |  |||  |||||||||||||||||||||||||||    
T  21381481 acacttttccagtcttctgcaatctttaggcgagttagagtccttg-aaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggt 21381383  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||| |||| ||||| ||||||| ||||||||||||||||    
T  21381382 gatacacagcttctgatgaactagcttctgatgacgtca 21381344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 8182935 - 8183175
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||| |||||| |||||||||| | ||         ||||||||||||    
T  8182935 acagagtagtggagatagtggttgtacacttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaatcctttcaaaata 8183034  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    | |||||||||||||||||||||||||||||| |||| |||||||| | | |  | | |||||||  |||||||| ||| ||||||||||||||||||||    
T  8183035 gttgttgctatacttttccagtcttctgcaatcttagacgagtttgaaacttttata-caactttttaagctttgagttgcatctcctgatgaactgcag 8183133  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||||| ||| | |||||||||||||| ||||    
T  8183134 cttctggtgattcacagcttttgatgaacttgcttctaatga 8183175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24794868 - 24794732
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctt-tttgaataataagcatccaatgcctttcaaaatagctgttgc 99  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| |||||    
T  24794868 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaggaataagcatccaatgcatttcaaaatagccgttgc 24794769  T
Q  100 tatacttttccagtcttctgcaattt-taggcgagtt 135  Q
     ||||||||||||||||||||||||| ||||||||||    
T  24794768 catacttttccagtcttctgcaatttctaggcgagtt 24794732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2265672 - 2265446
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagca---------tccaatgcctttcaaaata 91  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||         | |||  |||| |||||||    
T  2265672 acagagcagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaata 2265573  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || |||||||||||||| |||||||||||||| ||||| |||||||| || ||   ||||| |||| ||||||||  ||| |||||||||||||||| ||    
T  2265572 gccgttgctatactttttcagtcttctgcaatctttagacgagtttgaat-ctgttaaacagcttttaaagctttaagttgcatctcctgatgaactaca 2265474  T
Q  191 gcttctggtgattcacaacttctaatga 218  Q
     ||||||||||||| || ||||| ||||    
T  2265473 acttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 4821479 - 4821720
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc--------ctttcaaaatag 92  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| | |||||||| |||||| || |||||||||||||        ||||||||||||    
T  4821479 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaatctttcaaaatag 4821578  T
Q  93 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    | ||||||  ||||||| ||||||||| ||| ||||| |||||||| ||  |   ||||| ||||  |||||||  |||  |||||| ||||||||||||    
T  4821579 ccgttgctccacttttctagtcttctgtaatctttagacgagtttgaat-ttgttaaacagcttttgaagctttaagttgtatctccggatgaactgcag 4821677  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||||  || ||||| | ||||||||||||||||||    
T  4821678 cttctggtgattttcagcttctgacgaacttgcttctgatgac 4821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 48806031 - 48805800
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgcta 101  Q
    ||||||| ||||  |||||||||||||||| |||| ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| |||| ||||| |    
T  48806031 cagagtagtggaagtagtggttgtacactttgtacgaacgtactatgtcaacgctctttgaagaaatagcatccaatgcatttcaaactagccgttgcca 48805932  T
Q  102 tacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    || |  ||||||||| || ||||| |||||||||| |  |||| | ||||| ||||  ||   ||| ||| |||||| ||||||||||||||||||||||    
T  48805931 tattcctccagtcttatgtaatttctaggcgagttagagtccttg-aaacagcttttgaaaacttgagttccatctcttgatgaactgcagcttctggtg 48805833  T
Q  201 attcacaacttctaatgaacttgcttctgatga 233  Q
    || || | ||||| |||||||| ||||||||||    
T  48805832 atacatagcttctgatgaactttcttctgatga 48805800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 4412115 - 4411883
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  ||||||||||||| |||||||| ||| || ||||||||||| |||||  | |||||||||||||| ||||||  |||| ||||      
T  4412115 acagagtagtggaagtagtggttgtacagttcgtacagacgcacaatgtcaacgctctttgagaattaagcatccaatgcttttcaagttagccgttgtc 4412016  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||| |||||||||||||||||| |||||||||| |  |||| | ||||| ||||  || ||||  |||  |||||| ||||||||||||||||||||    
T  4412015 atacttctccagtcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaaactttaagttcaatctccagatgaactgcagcttctggt 4411917  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    |||  ||| ||||| ||||| |||||||| ||||    
T  4411916 gataaacagcttctgatgaatttgcttctaatga 4411883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 16112037 - 16111791
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || |||||||||||||         ||| ||||| |    
T  16112037 acagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaatttcttccaaaaaa 16111938  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||| | |||||||||| | ||||| |||| ||| |||| | |||||||||||  |||||||  ||| ||||  ||||| |||||||    
T  16111937 gtcgttgcttcactttttccgtcttctgcactctttagacgaggttgaatcc-ataaaacaacttttgaagctttaagttgcatcctctgatcaactgca 16111839  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||   | |||||||| |||||||||||||||||||||    
T  16111838 gcttctggtgatttttatcttctaataaacttgcttctgatgacgtca 16111791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 14426552 - 14426757
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  14426552 acagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 14426651  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  ||||||||||||||||||||| |||||  ||||||| |||| |  ||||| |||   |||||||  ||| |||||||||||||||||||    
T  14426652 gtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatcc-attaaacagcttctgaagctttaagttgcatctcctgatgaactgca 14426750  T
Q  191 gcttctg 197  Q
     ||||||    
T  14426751 ccttctg 14426757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 35952841 - 35952599
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||  || || |||||||||         ||||||||||||    
T  35952841 acagagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcctttcaaaata 35952742  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||||||||||||| ||||  |||| |||| ||| |||| |  ||||| ||||  |||| ||  ||| ||||  |||||||||||||    
T  35952741 gtcgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgca 35952642  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
     ||||||||||||   | ||||| || ||||||||||||||||    
T  35952641 acttctggtgatttttagcttctgataaacttgcttctgatga 35952599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 233
Target Start/End: Complemental strand, 12174479 - 12174252
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatact 105  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||||  ||||||  |||    
T  12174479 tagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcact 12174380  T
Q  106 tttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattc 204  Q
    ||||||||||||||||||  |||| |||| ||| |||| | |||||| ||||  |||| ||  ||| ||||  ||||||||||||||||||||||||||     
T  12174379 tttccagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagc-ttaagttgcatcctctgatgaactgcagcttctggtgattt 12174281  T
Q  205 acaacttctaatgaacttgcttctgatga 233  Q
      | ||||| || ||||||||||||||||    
T  12174280 ttagcttctgataaacttgcttctgatga 12174252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 238
Target Start/End: Complemental strand, 48237051 - 48236809
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctg 95  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| ||||||||||  |||||||         ||||| | |  |    
T  48237051 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatctgatgccttcaaatcctttcaaacttgtcg 48236952  T
Q  96 ttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    |||||  || ||| ||||||| ||||||  |||| |||| ||| |||| |   |||||||||  |||||||  ||| |||||||||||||||||||||||    
T  48236951 ttgcttcaccttttcagtcttatgcaatgcttagacgagattgaatcc-attgaacaacttttgaagctttaagttgcatctcctgatgaactgcagctt 48236853  T
Q  195 ctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||  || ||||| ||||||||||||||||||||||||    
T  48236852 ctggtgattttcagcttctgatgaacttgcttctgatgacgtca 48236809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 238
Target Start/End: Complemental strand, 16543152 - 16542927
Alignment:
Q  22 ttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatacttttccag 112  Q
    |||||||| ||||||||||||||| |||||  ||| |||||| || ||||||||||||||||         |||||||||  ||||||  ||||||||||    
T  16543152 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16543053  T
Q  113 tcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaactt 211  Q
    |||||||||||  |||  |||||||| |||| |  ||||| ||||  |||| ||  ||| ||||||||||||||||||||||| ||||||||  ||  ||    
T  16543052 tcttctgcaatcattaaacgagtttgaatcc-attaaacagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagttt 16542954  T
Q  212 ctaatgaacttgcttctgatgacgtca 238  Q
    || |||||||| |||||||||||||||    
T  16542953 ctgatgaactttcttctgatgacgtca 16542927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 16622510 - 16622735
Alignment:
Q  22 ttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatacttttccag 112  Q
    |||||||| ||||||||||||||| |||||  ||| |||||| || ||||||||||||||||         |||||||||  ||||||  ||||||||||    
T  16622510 ttgtacacatcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccag 16622609  T
Q  113 tcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaactt 211  Q
    |||||||||||  |||  |||||||| |||| |  ||||| ||||  |||| ||  ||| ||||||||||||||||||||||| ||||||||  ||  ||    
T  16622610 tcttctgcaatcattaaacgagtttgaatcc-attaaacagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagttt 16622708  T
Q  212 ctaatgaacttgcttctgatgacgtca 238  Q
    || |||||||| |||||||||||||||    
T  16622709 ctgatgaactttcttctgatgacgtca 16622735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21283526 - 21283444
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||||||||| ||||||||||||||||    
T  21283526 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaataacaagcatccaatgcctt 21283444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 15704620 - 15704445
Alignment:
Q  33 gtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatacttttccagtcttctgcaat 123  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||         |||| ||||||||  |||||||||||||||||||||||||||||    
T  15704620 gtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaat 15704521  T
Q  124 -tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
     ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||| |||||||||| || ||||||||    
T  15704520 ctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagtttcatcttctgatgaactacaacttctggt 15704445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 28622494 - 28622263
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatactt 106  Q
    |||||||||||||| ||||||||  ||||| |||||||||  |||||| || || |||||||||||||         ||||| |||| ||||||  ||||    
T  28622494 tagtggttgtacacctcgtacaattgtactttgtcaacgccctttgaaaaacaaacatccaatgccttcaaatcctttcaaattagccgttgcttcactt 28622395  T
Q  107 ttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattca 205  Q
    ||| ||| |||||||||  |||| |||| ||| |||| |   |||||||||  |||||||  ||| ||||||||||||||||||||||||||||||||      
T  28622394 ttctagtattctgcaatgcttagacgagattgaatcc-attgaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatttt 28622296  T
Q  206 caacttctaatgaacttgcttctgatgacgtca 238  Q
     | ||| | ||||||||||||||||||||||||    
T  28622295 tagcttatgatgaacttgcttctgatgacgtca 28622263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 30944476 - 30944271
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | |||||||||| |||||| |||||||||||||||         ||||||||||||    
T  30944476 acagagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaata 30944377  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    | |||||||  ||||||||| |||||||||||  |||| |||| ||  |||| | |  |||||| ||  |||||||  ||| ||||||||||||||||||    
T  30944376 gttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttg--aacaacctttgaagctttaagttgcatctcctgatgaactgc 30944279  T
Q  190 agcttctg 197  Q
    ||||||||    
T  30944278 agcttctg 30944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19711166 - 19711084
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||  |||||||||||||||||||||||||||||| |||||| ||| ||||||  ||||||||||||||||||    
T  19711166 acagagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgcctt 19711084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23280111 - 23280029
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  23280111 acagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 23280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 33605705 - 33605772
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||||| || ||||||||||||||||    
T  33605705 tagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 33605772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 13692372 - 13692478
Alignment:
Q  17 agtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtctt 116  Q
    ||||||||||||||||||||||  ||||| ||||||| || | | || |  |||||||||||| |||||||||||| |||||||  ||| ||||||||||    
T  13692372 agtggttgtacacttcgtacaattgtactttgtcaacactctataaagatcaagcatccaatgtctttcaaaatagttgttgcttcactcttccagtctt 13692471  T
Q  117 ctgcaat 123  Q
    |||||||    
T  13692472 ctgcaat 13692478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28409044 - 28409126
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  28409044 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 28409126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 33691865 - 33691617
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| |||||| || ||||||| || ||         |||||||||||    
T  33691865 acagagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctaacgcctttaaattctttcaaaata 33691766  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctt--tgggttacatctcctgatgaactg 188  Q
    |  ||||||  ||| |||||||||||||||||  |||| |||| ||  |||| |   |||| | ||  ||||||  ||  || ||||||||||||||||     
T  33691765 gtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatcc-atttaacagcctttgaagctttatgtcttgcatctcctgatgaacta 33691667  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
     ||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  33691666 gagcttctggtgattttcaacttctaatgaacttgcttctgataacgtca 33691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 13138045 - 13137966
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  13138045 gagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 13137966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 29935507 - 29935432
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||| || || |||||||||||||    
T  29935507 agtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgc 29935432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19237196 - 19237114
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||| ||  ||| | |||||||||| |||||| || ||||||||||||||||    
T  19237196 acagagtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctttgaagaacaagcatccaatgcctt 19237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 30945505 - 30945427
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||  || ||||||||||||||||    
T  30945505 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaggaacaagcatccaatgcctt 30945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44467069 - 44467151
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| ||||||| || ||| || || ||||||||||||||||    
T  44467069 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttaaagaacaagcatccaatgcctt 44467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 4429162 - 4428999
Alignment:
Q  72 atccaatgcctttcaaaatagctgttgc--tatacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttggg 168  Q
    ||||||||| ||||||  |||| |||||  ||||||| ||| ||||||||||||||| ||||||||| |  |||| |||| || ||||  || ||||  |    
T  4429162 atccaatgcttttcaagttagccgttgccatatacttctcctgtcttctgcaatttttaggcgagttagagtccttgaaa-cagcttttgaaactttaag 4429064  T
Q  169 ttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||  |||||| |||||||||||||||||||||||  ||| ||||| ||||| |||||||||||||    
T  4429063 ttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctgatga 4428999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 15467922 - 15468003
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||| ||||| || ||||||||||| ||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  15467922 cagagtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 15468003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 2913758 - 2913679
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  2913758 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 2913679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 13880112 - 13880191
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || |||||||||| ||||||||    
T  13880112 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatctaatgcctt 13880191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 16310045 - 16309978
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  16310045 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 16309978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 33605858 - 33605937
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||  || ||||| ||||| | | ||||||||||||||    
T  33605858 aagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatgacgtca 33605937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22578174 - 22578092
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||| || || || ||| |||||||||    
T  22578174 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaatcattcaatgcctt 22578092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24788146 - 24788228
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| ||||||  || |||||| || ||||| ||||||||||    
T  24788146 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctttgaagaacaagcacccaatgcctt 24788228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 331659 - 331731
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||||||||||||||||||||   ||||| ||||||||| ||||||  |||||||||||||||||||    
T  331659 tggaggtagtggttgtacacttcgtacatttgtactttgtcaacgc-ttttgagcaataagcatccaatgcctt 331731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 16316707 - 16316578
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 94  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||| |||||||| ||  || || ||||||||||||         |||||||||||||||    
T  16316707 gagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaacaagcatccaatggcttcaaatcctttcaaaatagct 16316608  T
Q  95 gttgctatacttttccagtcttctgcaatt 124  Q
    ||||||  ||| |||  |||||||||||||    
T  16316607 gttgcttcactcttctggtcttctgcaatt 16316578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 9069570 - 9069650
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||| |||  ||||| || |||||| ||||||||||    
T  9069570 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctccttgaagaacaagcatacaatgccttt 9069650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 13648737 - 13648789
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||||    
T  13648737 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgct 13648789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 9709940 - 9709873
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| |||||||||||||   |||||||||||||||| |||||| || ||||||| ||||||||    
T  9709940 tagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgcctt 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 15088528 - 15088603
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 79  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||    
T  15088528 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatg 15088603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 21692295 - 21692374
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  21692295 gagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21692374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 39284714 - 39284635
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || || |||||||||||||    
T  39284714 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatccaatgcctt 39284635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 2913579 - 2913513
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||||| ||| ||||||||||   || ||||| |||||||||||| |||||||||||    
T  2913579 catctcctgatgaactacagtttctggtgatcttcatcttctgatgaacttgcttttgatgacgtca 2913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 5000972 - 5000922
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacg 54  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||||    
T  5000972 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacg 5000922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14193119 - 14193201
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| | ||| ||||||||||||||||||||||   ||||| ||| |||||| |||||| || |||||| |||||||||    
T  14193119 acagagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctttgaagaacaagcattcaatgcctt 14193201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 21695588 - 21695654
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||| ||||||||| ||||||||||||||   || ||||| |||||||||||| |||||||||||    
T  21695588 catctcttgatgaacttcagcttctggtgatcttcagcttctgatgaacttgcttatgatgacgtca 21695654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 30026092 - 30026158
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||| |||||||||  |||||||||||||   || ||||| ||||||||||||||||||||||||    
T  30026092 catctcttgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtca 30026158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 39284536 - 39284470
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||| ||||||| || ||||||||||||||   || ||||| ||||||||||||||||||||||||    
T  39284536 catcttctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtca 39284470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 44467252 - 44467318
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||||| |||||| |||||||   || ||||| |||||||||||||||||| |||||    
T  44467252 catctcctgatgaacttcagcttttggtgatcttcagcttctgatgaacttgcttctgatggcgtca 44467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 5826170 - 5826211
Alignment:
Q  193 ttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  5826170 ttctggtgattcacagcttctgatgaacttgcttctgatgac 5826211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 9709788 - 9709744
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 203  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||    
T  9709788 aagctttatgttgcatctcctgatgaactgcagcttctggtgatt 9709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 13018655 - 13018603
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  13018655 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 13018603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 13730825 - 13730749
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  13730825 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 13730749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 21695424 - 21695488
Alignment:
Q  19 tggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  21695424 tggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21695488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 10883323 - 10883244
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| ||||| |||||||||||||||||  ||||| |||||||||| ||  || || | ||||||||||||||    
T  10883323 gagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaggcatccaatgcctt 10883244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 11792921 - 11792967
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  11792921 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 11792967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 12366892 - 12366846
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  12366892 tggaggtagtggttgtatacttcgtacaattgtactatgtcaacgct 12366846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 13260759 - 13260689
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| |||||||||||||||||||||||  ||||||| |||| ||| ||  || || |||||||||||||    
T  13260759 tggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaacaagcatccaatgc 13260689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 15088707 - 15088773
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||| |  |||||||||||||   || ||| | ||||||||||||||||||||||||    
T  15088707 catctcctgatgaattagagcttctggtgatcttcagcttatgatgaacttgcttctgatgacgtca 15088773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 331831 - 331899
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaac--ttgcttctgatgacgtca 238  Q
    |||||||||||| ||| ||||||||||||||   || ||||| ||||||  ||||||||||||||||||    
T  331831 catctcctgatggacttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatgacgtca 331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 8183166 - 8183195
Alignment:
Q  209 cttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||||||||||||||||    
T  8183166 cttctaatgaacttgcttctgatgacgtca 8183195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 2500243 - 2500291
Alignment:
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||| | || ||||| |||||||||||| |||||||||||    
T  2500243 agcttctggtgatcctcagcttctgatgaacttgcttatgatgacgtca 2500291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 30025928 - 30025992
Alignment:
Q  19 tggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  30025928 tggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatcgaatgcctt 30025992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 5 - 238
Target Start/End: Complemental strand, 46796514 - 46796282
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatac 104  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||| |||| ||||  ||||    
T  46796514 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgcctttcaaattagccgttgtaatac 46796415  T
Q  105 ttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattc 204  Q
    ||||||||||||||||||| |||| |||||||| |||||   ||||||||||  |||||||  ||| ||||||||||||||||||||||||| |||||||    
T  46796414 ttttccagtcttctgcaatcttagacgagtttgaatcct-ttaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttcttgtgattc 46796316  T
Q  205 acaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||| ||||| ||||||||||||||||||||||||    
T  46796315 acagcttctgatgaacttgcttctgatgacgtca 46796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30054368 - 30054131
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgcctttcaaaatagctgttgc 99  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||   |||||||| ||||||||||||||| |||  |||||    
T  30054368 acagagtagtggagttagtggttgtacatttcgtacaaacgtactatgtcaacgctcttttgttgaataagcacccaatgcctttcaaagtagtcgttgc 30054269  T
Q  100 tatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    |||||||||| ||||||||||||||||||||||||||| || || | ||||| ||||  ||||||||  || ||||||||||||||||| || |||||||    
T  30054268 tatacttttcaagtcttctgcaattttaggcgagtttgaattcttg-aaacagcttttgaagctttgaattgcatctcctgatgaactgaagtttctggt 30054170  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  30054169 gattcacagcttctgatgaacttgcttctgatgacgtca 30054131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 21605805 - 21605572
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||||||  ||||      
T  21605805 acagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgtc 21605706  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||||||||||||||| |||||||||| |  |||| | ||||||||||  |||||||  ||| ||||||||||||||||||| ||||||||    
T  21605705 atacttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacaacttttgaagctttaagttccatctcctgatgaactgcaacttctggt 21605607  T
Q  200 gattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||| |||||||||| |||||||||||| |||||||    
T  21605606 gatacacaacttctgatgaacttgcttatgatgac 21605572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 40850991 - 40851213
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||  ||||| |||||||||||||||    
T  40850991 tagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtct 40851090  T
Q  116 tctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttcta 214  Q
    |||||||||| |||||||||| |  |||| | || || ||||  |||||||  ||| ||||||||||||||||| ||||||||||||| ||||||||||     
T  40851091 tctgcaatttctaggcgagttagagtccttg-aaccagcttttgaagctttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctg 40851189  T
Q  215 atgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||||||||||    
T  40851190 atgaacttgcttctgatgacgtca 40851213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 21636821 - 21636588
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||  |||||     
T  21636821 acagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgcc 21636722  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||||||||||||||| |||||||||| |  |||| | ||||| ||||  |||||||  ||| || |||||||||||||||  ||||||||    
T  21636721 atacttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaagctttaagttccaactcctgatgaactgccacttctggt 21636623  T
Q  200 gattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||| |||| ||||| ||||||||||||||||||||    
T  21636622 gatacacagcttctgatgaacttgcttctgatgac 21636588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 49666555 - 49666325
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataag-catccaatgcctttcaaaatagctgttgct 100  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||| |||||| |||| | | | |||| |||||||||||||  |||| |    
T  49666555 cagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaatgctctttgaagaatatgtctttcaat-cctttcaaaatagtcgttgtt 49666457  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||| |||| |||||||| ||||| |||| |||||||  |||||||  ||| |||||||||||||||||||||||||||||    
T  49666456 atacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtg 49666358  T
Q  201 attcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||| | ||||| |||||||||||||    
T  49666357 attcacaacttatgatgaaattgcttctgatga 49666325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 14955435 - 14955676
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||         ||||||||    
T  14955435 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaata 14955534  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | ||||||| ||| |||||||||||||||||| ||||| |||||||| |||| |  ||||| ||||  |||||||| |||||||||||||||||||||||    
T  14955535 gttgttgctttacctttccagtcttctgcaatctttagacgagtttgaatcc-attaaacagcttttgaagctttgagttacatctcctgatgaactgca 14955633  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
     ||||||||||||| || ||||| || ||||||||||||||||    
T  14955634 acttctggtgattctcagcttctgataaacttgcttctgatga 14955676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 21640877 - 21641108
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa---------aatagc 93  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||         ||||||    
T  21640877 agagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatccttccaaaatagc 21640976  T
Q  94 tgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagct 193  Q
     |||||||||||||||||||||||| |||| ||||||||||||| ||||| | ||||| ||||  | |||||  ||| ||||||||||||||||||| ||    
T  21640977 cgttgctatacttttccagtcttctacaatcttaggcgagtttgaatccttg-aaacagcttttgaggctttaagttgcatctcctgatgaactgcaact 21641075  T
Q  194 tctggtgattcacaacttctaatgaacttgctt 226  Q
    |||||||||||||| ||||| ||||||||||||    
T  21641076 tctggtgattcacagcttctgatgaacttgctt 21641108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 233
Target Start/End: Original strand, 2785073 - 2785314
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||         |||||||||||    
T  2785073 cagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaata 2785172  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  2785173 gttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagttgcatctcctgatgaactaca 2785271  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
     ||||||||||||| || |||||||| ||||||||||||||||    
T  2785272 acttctggtgattctcagcttctaataaacttgcttctgatga 2785314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 1728166 - 1727935
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| || || |||||||||||||||||||||||||| |||||||||| | |  ||||  |||||||||||||||| |||||||||||| |||| |    
T  1728166 acagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaatgttccttgaggaataagcatccaatgcttttcaaaatagccgttgtt 1728067  T
Q  101 atacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||||| | |||||| |||||||||  |||||| ||| ||||| | ||||||||||  || || |  |||  |||||||||||||||||||||||||||    
T  1728066 a-actttccaagtcttttgcaattttctggcgagattgaatccttg-aaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggt 1727969  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| |||| ||||| |||||||||||| ||||||    
T  1727968 gatacacagcttctgatgaacttgcttttgatga 1727935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5213585 - 5213789
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||         |||| |||||||    
T  5213585 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactacgtcaacgc-ttttgaataataagcatctaatgccttcaaatccttccaaaata 5213683  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    | |||||||||||||||||||||||||||||| ||||  |||||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| ||    
T  5213684 gttgttgctatacttttccagtcttctgcaatctttatacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactaca 5213782  T
Q  191 gcttctg 197  Q
    |||||||    
T  5213783 gcttctg 5213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 24775685 - 24775442
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||  |||||||||||||||||||||||||||||| |||||| ||| |||||| ||||||||| |||||         ||||||||||||    
T  24775685 acagagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcctttcaaaata 24775586  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaact--g 188  Q
    | |||||||  ||||||||||||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||||||||||||||  |    
T  24775585 gttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactgcg 24775487  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||||| || ||| | || |||||| |||||||||    
T  24775486 cagcttctggtgattctcagcttgtgataaacttggttctgatga 24775442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 203
Target Start/End: Complemental strand, 20627578 - 20627371
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct---------ttcaaaatagctg 95  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  || |||||||||||||||         |||||||||| ||    
T  20627578 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatccattcaaaatagttg 20627479  T
Q  96 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagctt 194  Q
    |||||  |||||||||||||||||||||  |||| |||||||| |||| |  ||||| ||||  |||||||  ||| ||||||||||||||||||| |||    
T  20627478 ttgcttcacttttccagtcttctgcaatcattagacgagtttgaatcc-attaaacatcttttgaagctttaagttgcatctcctgatgaactgcaactt 20627380  T
Q  195 ctggtgatt 203  Q
    |||||||||    
T  20627379 ctggtgatt 20627371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 9700187 - 9699989
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| || || |||||||| ||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| |||||||||||  |||| |    
T  9700187 acagagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtt 9700088  T
Q  101 atacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||||| | ||||||||||||||||  |||||| ||| ||||| | ||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||    
T  9700087 a-actttccaagtcttctgcaattttctggcgagcttgaatccttg-aaacaacttttgaagctttaggtt-gatcttctgatgatctgcagcttctggt 9699991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 47207714 - 47207963
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||         ||||||| ||    
T  47207714 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaacta 47207813  T
Q  92 gctgttgctatacttttccagtcttctgcaat--tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    || ||||||  |||||||||||||||||||||  ||||| |||| ||  |||| |   |||||| ||  ||| |||  ||| ||||||||||||||||||    
T  47207814 gccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatcc-attgaacaacctttgaagttttatgttgcatctcctgatgaactgc 47207912  T
Q  190 agcttctggtgattcacaacttctaatgaactt--gcttctgatgacgtca 238  Q
    ||||||||||||||  || ||||| ||||| ||  ||||||||||||||||    
T  47207913 agcttctggtgattttcagcttctgatgaagttcagcttctgatgacgtca 47207963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29855417 - 29855499
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||    
T  29855417 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgcctt 29855499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 11223571 - 11223817
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||| |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  11223571 acagagtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 11223670  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||| ||||||||||||||   ||| |||| ||| | || |   |||| ||||  |||||    |||  |||||||||||||||||     
T  11223671 gtcgttgcttcactttttcagtcttctgcaatgcatagacgagattg-aacccattgaacagcttttgaagctcaaagttgtatctcctgatgaactgct 11223769  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||  ||  |||| ||||||||||||||||||||||||    
T  11223770 gcttctggtgattttcagattctgatgaacttgcttctgatgacgtca 11223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 53056878 - 53056747
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||| |||||| || ||||||||||||         ||||||||||||    
T  53056878 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 53056779  T
Q  92 gctgttgctatacttttccagtcttctgcaat 123  Q
    |  ||||||  |||||||||||||||||||||    
T  53056778 gtcgttgcttcacttttccagtcttctgcaat 53056747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 14969344 - 14969466
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgct 100  Q
    ||||| |||||||||||||||||||| ||| ||||| |||||||||| |||||| |||||||||||||||         ||||||||||||| |||||||    
T  14969344 tggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgttgct 14969443  T
Q  101 atacttttccagtcttctgcaat 123  Q
     |||| |||||||||||||||||    
T  14969444 ttactcttccagtcttctgcaat 14969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 33583239 - 33583480
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaatag 92  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||  || ||||||||||||         |||||||||||||    
T  33583239 agagtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatag 33583338  T
Q  93 ctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    | ||||||  |||||||||||||||| ||||  |||| | || ||| |||| | |||||||||||  |||| ||  ||| ||||  |||||||||| ||     
T  33583339 ccgttgcttcacttttccagtcttctacaatccttagacaaggttgaatcccataaaacaacttttgaagccttaagttgcatcctctgatgaactacaa 33583438  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| ||||||||   | ||||| ||  |||||||||||||||    
T  33583439 cttttggtgatttttagcttctgatagacttgcttctgatga 33583480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 2561196 - 2561444
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||   ||||| |||||||| | |||||| || |||||||||||          ||||||||||||    
T  2561196 acagagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctttgaagaacaagcatccaatttcttcaaatcctttcaaaata 2561295  T
Q  92 gctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggt--tacatctcctgatgaactg 188  Q
    | |||||||  ||| |||||||||||||||||  |||| |||| ||  |||| |   |||||| ||  |||||||  ||  | ||||||||||||||||     
T  2561296 gttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatcc-attgaacaacctttgaagctttaagtcttgcatctcctgatgaacta 2561394  T
Q  189 cagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
     ||||||||||||||| || ||||| ||||||||||||||||||| ||||    
T  2561395 gagcttctggtgattctcagcttctgatgaacttgcttctgatgatgtca 2561444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22140772 - 22140850
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 79  Q
    |||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||| |||||| || ||||||||||||    
T  22140772 acagagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatg 22140850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 46349979 - 46349754
Alignment:
Q  17 agtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatacttt 107  Q
    |||||||||||||||||||||| |||||| |||||| | | | |||| || ||||||||||||||||         ||||| |||  ||||||  |||||    
T  46349979 agtggttgtacacttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttt 46349880  T
Q  108 tccagtcttctgcaatt-ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcac 206  Q
    ||||||||||||||||  |||| |||| ||| |||  |   |||||||||  |||  ||  ||| | ||||||||||||||||| ||||||||||||  |    
T  46349879 tccagtcttctgcaatgcttagacgagattggatca-attgaacaacttttgaagtcttaagttgcttctcctgatgaactgcaacttctggtgattttc 46349781  T
Q  207 aacttctaatgaacttgcttctgatga 233  Q
    | |||||||||||||||||||||||||    
T  46349780 agcttctaatgaacttgcttctgatga 46349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 38177792 - 38177712
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  38177792 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttaaagaacaagcatccaatgcctt 38177712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 13948347 - 13948426
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  13948347 gagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 13948426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18121773 - 18121690
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||| ||||||||||    
T  18121773 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgccttt 18121690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18142903 - 18142820
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||| ||||||||||    
T  18142903 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgccttt 18142820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6090740 - 6090822
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||| ||||||| || || |||||| |||||||||    
T  6090740 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttttaaagaacaagcattcaatgcctt 6090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 11909171 - 11909093
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| ||||||| |||||||||||| | ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  11909171 agtagtggaggtagtggtcgtacacttcgtaaagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 11909093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40799882 - 40799964
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||| ||||||| ||||    
T  40799882 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagtatccaattcctt 40799964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11868277 - 11868338
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttga 62  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||| |||||||||| |||||    
T  11868277 acagagtagtggaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttga 11868338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 13780726 - 13780653
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  ||||| ||||||||||||||||    
T  13780726 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgcctt 13780653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 15833566 - 15833643
Alignment:
Q  162 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  15833566 ctttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtca 15833643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 28582117 - 28582194
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc 81  Q
    ||||| ||||| |||||||||||||||||||||||  ||| | |||||||||| |||||| || ||||||||||||||    
T  28582117 gagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaacaagcatccaatgcc 28582194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 20646165 - 20646241
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  20646165 gagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 20646241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 49553638 - 49553558
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| | |||| || || |||||||||||||    
T  49553638 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctctgaagaacaaacatccaatgcctt 49553558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 13824092 - 13824159
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  13824092 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 13824159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 16658765 - 16658690
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||| ||||| |||||||||||||||||||||||  ||| |||||||||||| ||  || ||||||||||||||||    
T  16658765 agtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaataagcatccaatgc 16658690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37412613 - 37412759
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||| |||||||||||| || |||||||| ||  |  |  | |||||||||||||| |||||||||||| |||||     
T  37412613 acagagtagtggagatagtggttgtacatttcgtacaaacgcacaatgtcaactctcctataggattaagcatccaatgcttttcaaaatagccgttgc- 37412711  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaa 148  Q
    | ||||| | ||  |||||||| || ||||||| ||| ||||| ||||    
T  37412712 aaactttccaagatttctgcaacttcaggcgagcttgaatccttgaaa 37412759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 41495010 - 41495089
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  41495010 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 41495089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 11869256 - 11869318
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||| |||||||||||||||||||||||||||  || ||||| ||||| ||||||||||||||    
T  11869256 catcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatgac 11869318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16032533 - 16032615
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||| ||| ||  || || ||||||||||||||||    
T  16032533 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgcctt 16032615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 10529506 - 10529583
Alignment:
Q  162 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    |||| |||| ||||| ||||||| ||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  10529506 ctttaggttgcatcttctgatgagctgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtca 10529583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 12963233 - 12963149
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaa 89  Q
    ||||| ||||| |||||||||||||||||||||||  ||||||||||||| || ||  || || |||||||||||| |||||||||    
T  12963233 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaacaagcatccaatg-ctttcaaaa 12963149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 37467350 - 37467423
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  37467350 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 37467423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 45858875 - 45858818
Alignment:
Q  26 acacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  45858875 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 45858818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 50300246 - 50300286
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  50300246 tagtggttgtacacttcgtacaaacgtactttgtcaacgct 50300286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 14393151 - 14393076
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  14393151 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 14393076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12389023 - 12388941
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  || || || ||||||| ||  || || ||||||||||||||||    
T  12389023 acagagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaagaagcatccaatgcctt 12388941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25398406 - 25398344
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 63  Q
    |||||||| ||||| |||||||||||||||||||||||  || || |||||||||| ||||||    
T  25398406 acagagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctttgaa 25398344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 47405568 - 47405490
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||||||| || |||||| || || |||| ||||||||    
T  47405568 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttgaagaacaaacatcaaatgcctt 47405490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 28582296 - 28582357
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||| |  ||||||||||||||  || ||||||||| |||||||||||||||    
T  28582296 catctcctgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatga 28582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12726381 - 12726302
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| |||||||||||||||| ||||||  ||||| ||| ||| || ||| || | ||||||||||||||    
T  12726381 acagagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagtaagcatccaatgc 12726302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 17239069 - 17239018
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  17239069 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 17239018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 49642910 - 49642831
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || || || |||||||||||||    
T  49642910 gagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctcttaaaagaacaatcatccaatgcctt 49642831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 50300396 - 50300451
Alignment:
Q  178 ctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||||||||||||||||||||||||   ||||| | || ||||||||||||||||    
T  50300396 ctgatgaactgcagcttctggtgatttttaacttatgataaacttgcttctgatga 50300451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 22804171 - 22804119
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  22804171 gagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgct 22804119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 31303397 - 31303449
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| ||||||||||    
T  31303397 gagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgct 31303449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 47405405 - 47405361
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgatt 203  Q
    |||||||  ||| |||||| |||||||||||||||||||||||||    
T  47405405 aagctttatgttgcatctcgtgatgaactgcagcttctggtgatt 47405361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 17867 - 17631
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||  ||||||    
T  17867 acagagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgcctttcaaaatagacgttgct 17768  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||  ||||||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  |||  ||||||||||||| || |||||||||||    
T  17767 atacttttgtagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttgtatctcctgatgaattgaagcttctggtg 17669  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  17668 attcacagcttctgatgaacttgcttctgatgacgtca 17631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 19066158 - 19065921
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||     
T  19066158 acagagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgcc 19066059  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||||||||||||||||||| |||||||||| |  |||| | ||||| ||||  |||||||  | | ||||||||||||||||||||||||||||    
T  19066058 atacttttccagtcttctgcaatttctaggcgagttagagtccttg-aaacagcttttgaagctttaagatccatctcctgatgaactgcagcttctggt 19065960  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||  ||| ||||| ||||||||||||||||||||||||    
T  19065959 gatatacagcttctgatgaacttgcttctgatgacgtca 19065921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 22076547 - 22076305
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| |||||         ||| |||||||    
T  22076547 acagagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaatccttccaaaata 22076448  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||| ||||||||||||| ||||| |||||||  |||||  ||| || |||| ||||||||  ||| |||||||||||||||| ||    
T  22076447 gtcgttgctatacttttcgagtcttctgcaatctttagacgagtttaaatcctttaaa-cagcttttaaagctttaagttgcatctcctgatgaactaca 22076349  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
     |||||||||||||||| ||||| ||||||||||||||||||||    
T  22076348 tcttctggtgattcacagcttctgatgaacttgcttctgatgac 22076305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 12349002 - 12349211
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||         ||||||||||||    
T  12349002 acagagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatcctttcaaaata 12349101  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    |  ||||||||||||||||||||||||||||| |||| |||||||| ||||| | ||||| ||||  ||||| |  ||| ||||||||||||||||||||    
T  12349102 gtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctctaagttgcatctcctgatgaactgcag 12349200  T
Q  192 cttctggtgat 202  Q
    |||||| ||||    
T  12349201 cttctgatgat 12349211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 21618253 - 21618494
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         |||| |||||||    
T  21618253 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaata 21618352  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  |||||| ||||||||||||||||| |||| |||||  ||||||| ||||    ||||||||||  |||||||  ||| ||||| |||||||||| ||    
T  21618353 gtcgttgctttacttttccagtcttctacaatctttagaagagtttgaatcc-gttaaacaacttttgaagctttaagttgcatcttctgatgaactaca 21618451  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||| || ||||| || ||||||||||||||||    
T  21618452 gcttctggtgattctcagcttctgataaacttgcttctgatga 21618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 33352066 - 33351827
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||||         ||||||||||||    
T  33352066 acagagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctctt-gaagaataaacatccaatgtttttcaatcctttcaaaata 33351968  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    ||  |||||||||||||||||||||||||| | |||| ||||| || ||||| |||| || ||||  | |||||  ||| ||||||| |||||| |||||    
T  33351967 gcc-ttgctatacttttccagtcttctgcactcttagacgagtgtgaatccttgaaa-cagcttttgaggctttaagttgcatctcccgatgaaatgcag 33351870  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
     ||||||||||||||| ||||| ||||||||||||||||||||    
T  33351869 tttctggtgattcacagcttctgatgaacttgcttctgatgac 33351827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16877222 - 16877468
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||  ||| |||||||||| ||||         | || |||    
T  16877222 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaattccttcaaatccttttaagata 16877321  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  |||||  |||||||||||||| ||||| |||||||| |||| |  ||||||||||  |||||||  ||| |||||||||||||||| ||    
T  16877322 gtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgaatcc-attaaacaacttttgaagctttaagttgcatctcctgatgaactaca 16877420  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
     ||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  16877421 acttttggtgattcacagcttctgatgaacttgcttctgatgacgtca 16877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 15954712 - 15954958
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| |||||         ||||||||| ||    
T  15954712 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcctttcaaatta 15954811  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||  | ||||||||||||||||||| |||||  ||||||| ||||    ||||| ||||  |||||||  ||| |||||| ||||||||| ||    
T  15954812 gtcgttgcttcatttttccagtcttctgcaatctttagaagagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcttgatgaactaca 15954910  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||| |||| || ||||| || |||||||||||||||||||||    
T  15954911 gcttctggtaattctcagcttctgataaacttgcttctgatgacgtca 15954958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16336136 - 16336366
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| || || ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||         |||| |||||||    
T  16336136 acagagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatccttccaaaata 16336235  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||||||||||||||||| ||||| |||||||| |||||   ||||||||||  ||||||   ||| ||||||||||||| || ||    
T  16336236 gtcgttgctatacttttccagtcttctgcaatgtttagacgagtttgaatcct-ttaaacaacttttgaagcttcaagttgcatctcctgatgatctaca 16336334  T
Q  191 gcttctggtgattcacaacttctaatgaactt 222  Q
     ||||||||||||| || ||||| || |||||    
T  16336335 acttctggtgattctcagcttctgataaactt 16336366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 26589608 - 26589844
Alignment:
Q  1 acagagtaatggagttagtggttgtacactt-cgtacaaacgtactatgtcaacgctttttgaata--ataagcatccaatgcctttcaaaatagctgtt 97  Q
    |||||||| ||||  |||||||||||||||| |||||| |||||||||||||||||| |||||| |  || |||||||||||| ||||||| ||||||||    
T  26589608 acagagtagtggaagtagtggttgtacactttcgtacagacgtactatgtcaacgctctttgaaaatcattagcatccaatgcatttcaaactagctgtt 26589707  T
Q  98 gctatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttct 196  Q
    || | ||| ||| ||||||||| ||||| |||||||||| |  || | | ||||||||||  ||   ||| ||| |||||| ||||||||||||||||||    
T  26589708 gccacactcttctagtcttctgtaatttctaggcgagttagagtcattg-aaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttct 26589806  T
Q  197 ggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||| || | ||||  ||||||||||||||||||||    
T  26589807 ggtgatacatagcttcagatgaacttgcttctgatgac 26589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12423270 - 12423420
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||         ||||||||||||    
T  12423270 acagagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcctttcaaaata 12423369  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcc 142  Q
    |  ||||||||||||||||||||||||||| | |||| |||||||| ||||    
T  12423370 gtcgttgctatacttttccagtcttctgcattcttagacgagtttgaatcc 12423420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 19833173 - 19832938
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct-ttttgaataataagcatccaatg---------cctttcaaaat 90  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||||         |||||||||||    
T  19833173 acagagtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaat 19833074  T
Q  91 agctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    ||  ||||||  ||||||||||||||||||||| |||||  ||||||| ||||    ||||| |||| ||||||||  ||| |||||||||||||||| |    
T  19833073 agtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatcc-gttaaacagcttttaaagctttaagttgcatctcctgatgaactac 19832975  T
Q  190 agcttctggtgattcacaacttctaatgaacttgctt 226  Q
    | ||||||||||||| || ||||| || | |||||||    
T  19832974 atcttctggtgattctcagcttctgataatcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 17316650 - 17316467
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||  ||||||||||| |||| |||||||||||| | || || ||||| | |||||    
T  17316650 tagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccgatgcttttcaaaatagccgctgtta-actttccaagtct 17316552  T
Q  116 tctgcaa-ttttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtga 201  Q
    ||||||| |||| |||||| ||| ||||| | ||||||||||  ||||||| ||||  |||| ||||||| ||||||||||||||||    
T  17316551 tctgcaattttttggcgagcttgaatccttg-aaacaacttttgaagctttaggtt-gatcttctgatgatctgcagcttctggtga 17316467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 20488058 - 20487818
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||| |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  20488058 acagagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 20487959  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || ||||||  |||||| |||||||||||||| ||||| |||| ||| | || |  ||||||||||  |||| ||  ||| ||||  |||||||||||||    
T  20487958 gccgttgcttcacttttacagtcttctgcaatctttagacgaggttgaaccccattaaacaacttttgaagccttaagttgcatcctctgatgaactgca 20487859  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgat 231  Q
     ||||| ||||||   | ||||| || ||||||||||||||    
T  20487858 acttctagtgatttttagcttctgataaacttgcttctgat 20487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19482761 - 19482858
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttg 98  Q
    |||||||| || || |||||||||||||||||||||||||| ||||||||||||||  ||||  |||||||||||||||| ||||||||||| |||||    
T  19482761 acagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagatgttg 19482858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 19086170 - 19086288
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctata 103  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||| ||||||||||||  ||||||  |    
T  19086170 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg-ctttcaaaatagtcgttgcttca 19086268  T
Q  104 cttttccagtcttctgcaat 123  Q
    || | |||||||||||||||    
T  19086269 ctctcccagtcttctgcaat 19086288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 32544274 - 32544357
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| ||||| ||||||||||||||    
T  32544274 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgccttt 32544357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 20730844 - 20730598
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||| | ||||| |||||||||||||||| ||||||  ||||| |||||||||| |||||| || || |||||||||||||         ||||| ||    
T  20730844 acagagcagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaacta 20730745  T
Q  92 gctgttgctatacttttccagtcttctgcaatt-ttaggcgagtttgtatcc-tagaaaacaactttcaaagctttgggttacatctcctgatgaactgc 189  Q
    |  ||||||  |||||||||||||||||||||  ||||  ||| ||  |||| | |||  || | ||  |||||||  ||||||||||||||||||||||    
T  20730744 gtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttgaa--cagcctttgaagctttttgttacatctcctgatgaactgc 20730647  T
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||| ||||||  || ||| | ||||||||||||||||||||||||    
T  20730646 agcttctagtgattttcagcttatgatgaacttgcttctgatgacgtca 20730598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 21235278 - 21235367
Alignment:
Q  148 aacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtc 237  Q
    |||||| || ||||||||  ||| ||||||||||||||||||||||||| ||||||  || ||||| |||||||||||||||||||||||    
T  21235278 aacaacctttaaagctttatgttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgcttctgatgacgtc 21235367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9717852 - 9717935
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || ||||||| |||||||||    
T  9717852 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgccttt 9717935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15531764 - 15531682
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||| ||||||||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  15531764 acagagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 15531682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 22802152 - 22802233
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||||||||||||||    
T  22802152 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgccttt 22802233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 34451626 - 34451563
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||    
T  34451626 catctcctgatgaactagagcttctggtgat---caacttctaatgaacttgcttctgatgacgtca 34451563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 15987245 - 15987324
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  15987245 gagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 15987324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14100580 - 14100498
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||| ||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  14100580 acagagtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaagaagcatccaatgcctt 14100498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 16265123 - 16265045
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtc 237  Q
    |||||||  ||| |||||| ||| |||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  16265123 aagctttatgttgcatctcttgacgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtc 16265045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29918026 - 29918108
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| || |||||||  |||||||    
T  29918026 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctgatgcctt 29918108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 21235135 - 21235216
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| |||||| || ||||||| ||||||||    
T  21235135 cagagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctttgaagaacaagcatcgaatgcctt 21235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 15302212 - 15302340
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 94  Q
    ||||| ||||| |||||||||||||||| ||||||  |||| ||||||||||| ||  || || ||||||||||||         ||||||||||||||     
T  15302212 gagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaaatcctttcaaaatagcc 15302311  T
Q  95 gttgctatacttttccagtcttctgcaat 123  Q
    ||||||  |||||||||||||||||||||    
T  15302312 gttgcttcacttttccagtcttctgcaat 15302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 24116840 - 24116916
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || |||||||||||||    
T  24116840 gagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 24116916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 16265290 - 16265211
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| ||||||||| |||||||||||||  ||||| | |||||||| |||||| || |||||||||||||    
T  16265290 acagagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctttgaagaacaagcatccaatgc 16265211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 17608288 - 17608217
Alignment:
Q  167 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| ||||| ||||||||||  |||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  17608288 ggttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgcttctgatgacgtca 17608217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 22386965 - 22387036
Alignment:
Q  162 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||| |||| ||||| ||||||||||| ||||||||||||| |||| ||| | |||||||||||||||||||    
T  22386965 ctttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttctgatga 22387036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 22802317 - 22802396
Alignment:
Q  159 aagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||  ||| |||||||||||||||| || ||||||||||||  || ||||| |||||||||||||| |||||||||    
T  22802317 aagctttatgttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttctaatgacgtca 22802396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17381530 - 17381592
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaa 63  Q
    ||||| || ||||| ||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  17381530 acagaatagtggaggtagtgattgtacacttcgtacaaacgtactttgtcaacgctctttgaa 17381592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18435565 - 18435647
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||| ||||| |||||||||||||||| |||||   ||||| |||||||||| |||||| || ||||||||||||||||    
T  18435565 acagtgtactggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 18435647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 21625114 - 21625192
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||| |||||| |||||| || |||||| |||||||||    
T  21625114 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgcctt 21625192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 13435543 - 13435599
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttt 59  Q
    |||||| ||||| |||||||||||||||||||||||  ||||| |||||||||||||    
T  13435543 agagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctttt 13435599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 19688790 - 19688857
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||||||||||||  ||||| |||||||||| |||||| || || |||||||||||||    
T  19688790 tagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 19688857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 26972363 - 26972285
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    ||||| ||||| ||||||||||||||||||  |||  ||||| |||||||||| |||||| || || ||||||||||||||    
T  26972363 gagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctttgaagaacaaacatccaatgccttt 26972285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 20112837 - 20112761
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| ||||||||||||| |||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  20112837 gagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 20112761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 18378326 - 18378405
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| | |||||||| ||  || || | ||||||||||||||    
T  18378326 gagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttcaaagaacatgcatccaatgcctt 18378405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26943585 - 26943667
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||  |||||||||||||||||||||||  |||||  | ||||||| ||  || || ||||||||||||||||    
T  26943585 acagagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaacaagcatccaatgcctt 26943667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 32544456 - 32544518
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||||||||  ||||| ||||||||  || ||||| |||||||||| |||||||||    
T  32544456 catctcctgatgaactagagcttatggtgattttcagcttctgatgaacttgcatctgatgac 32544518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 21128399 - 21128460
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||||| ||||||||||| |||||||||||||  | | ||||| ||||||| |||||||||||    
T  21128399 catcttctgatgaactgtagcttctggtgatataaagcttctgatgaactcgcttctgatga 21128460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 12715557 - 12715505
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| ||||||||||    
T  12715557 gagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgct 12715505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 2793 - 2568
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||           ||||||||||||| |||||||||||| ||||||    
T  2793 acagagtagtggagttagtggttgtacacttcatacaaacgtactatgtcaacgct-----------aagcatccaatgcttttcaaaatagccgttgct 2705  T
Q  101 atacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtg 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||  || |||| |||| ||| |||||||||||||||| ||||||||    
T  2704 atacttttccagtcttctgcaattttaggcgagtttgaatccttg-aaacagcttttgaaactttaggttgcatttcctgatgaactgcagtttctggtg 2606  T
Q  201 attcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||| ||| ||||| ||||||||||||||||||||||||    
T  2605 atttacagcttctgatgaacttgcttctgatgacgtca 2568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 923 - 686
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| | ||||||||||||||||||     
T  923 acagagtagtggaagtagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatacatttcaaaatagctgttgcc 824  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    ||||||||| ||||||||||||||| ||| |||||| |  |||| | ||||| ||||  || ||||  ||| |||||||||||||||||||| |||||||    
T  823 atacttttctagtcttctgcaatttatagacgagttagagtccttg-aaacagcttttgaaactttaagtttcatctcctgatgaactgcagtttctggt 725  T
Q  200 gattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||  |||| ||||| |||||||||||||| |||||||||    
T  724 gaaacacagcttctgatgaacttgcttctaatgacgtca 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 9569 - 9810
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||| |||| | |||||||||||||||||         ||||||||||    
T  9569 acagagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcctttcaaaata 9668  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    |  ||||||||||||| ||||||||||||||| |||| | |||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||||    
T  9669 gtcgttgctatactttcccagtcttctgcaatcttagacaagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcag 9767  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    |||||||||||||||| ||| | ||||||||||||||||||||    
T  9768 cttctggtgattcacagcttatgatgaacttgcttctgatgac 9810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 22233 - 21992
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcct--------ttcaaa-ata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||||||||        |||||| |||    
T  22233 acagagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaatccttcaaagata 22134  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  |||||||||||| |||||||||||||||| ||||| |||||||  |||||   ||||||||||  || ||||  ||| ||||| || ||||||| ||    
T  22133 gtcgttgctatacttctccagtcttctgcaatctttagacgagttttaatcct-ttaaacaacttttgaacctttaagttgcatcttctaatgaactaca 22035  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
     |||||||||||||||| ||||| || ||||||||||||||||    
T  22034 acttctggtgattcacagcttctgataaacttgcttctgatga 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 19043 - 19123
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    ||||| ||||| ||||||||||||||||||||||   ||||| |  ||||||| |||||| || ||||||| |||||||||    
T  19043 gagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaagaacaagcatcaaatgccttt 19123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 60812 - 61058
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa---------aata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| ||||||||| |||         ||||    
T  60812 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatccttccaaaata 60911  T
Q  92 gctgttgctatacttttccagtcttctgcaatttt-aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || |||||||||||||||||||||||||||||||| || |||||||  |||||  ||| |||||||  ||| |||  ||| |||||||||||||||| ||    
T  60912 gccgttgctatacttttccagtcttctgcaatttttagacgagtttaaatcctttaaa-caacttttgaagttttaagttgcatctcctgatgaactaca 61010  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
     ||||||||||||| |||||||| || |||||||||||||||||||||    
T  61011 acttctggtgattctcaacttctgataaacttgcttctgatgacgtca 61058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 7963 - 8186
Alignment:
Q  23 tgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagctgttgctatacttttccagt 113  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||         ||||||||||||  |||||||||||||||||||    
T  7963 tgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagt 8062  T
Q  114 cttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttct 213  Q
    |||||||||| |||| |||||||| ||||| | ||||| ||||  |||||||  ||||||||| |||||||||||||||||||||||||||||| |  ||    
T  8063 cttctgcaatcttagacgagtttgaatccttg-aaacagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccact 8161  T
Q  214 aatgaacttgcttctgatgacgtca 238  Q
     ||| || |||||||||||||||||    
T  8162 gatgtacgtgcttctgatgacgtca 8186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 1 - 123
Alignment:
Q  115 ttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttcta 214  Q
    ||||||||| |||| |||||||| ||||| |||| || ||||  |||||||  ||||||||| |||||||||||||||||||||||||||||| |  ||     
T  1 ttctgcaatcttagacgagtttgaatccttgaaa-cagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactg 99  T
Q  215 atgaacttgcttctgatgacgtca 238  Q
    ||| || |||||||||||||||||    
T  100 atgtacgtgcttctgatgacgtca 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 7258 - 7019
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||||         |||| |||||||    
T  7258 acagagtagtggagatagtggttgtacacttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaata 7159  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||||||||||||||||| || || || ||||| |||||   ||||| ||||  |||||||  ||| |||||||||||||||| ||    
T  7158 gtcgttgctatacttttccagtcttctgcaatcttcagacgggtttgaatcct-tcaaacagcttttgaagctttaagttgcatctcctgatgaactaca 7060  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgat 231  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  7059 gcttctggtgattcacagcttctgatgaacttgcttctgat 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 238
Target Start/End: Original strand, 9168 - 9409
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctg 95  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||         |||| ||||||||  |    
T  9168 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagtcg 9267  T
Q  96 ttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttc 195  Q
    |||||||||||||||| ||||||||||| || |  ||||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| || ||||    
T  9268 ttgctatacttttccaatcttctgcaatctttgatgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactacaacttc 9366  T
Q  196 tggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||| || ||||| || ||||||||||||||| |||||    
T  9367 tggtgattctcagcttctgataaacttgcttctgatggcgtca 9409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 234
Target Start/End: Complemental strand, 65484 - 65289
Alignment:
Q  47 tgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctgttgctatacttttccagtcttctgcaattttaggcgagtttg 137  Q
    |||||||||| |||||| |||||||||||||||||         |||||||||||  ||| ||||||||||||||||||||||||| |||| ||||||||    
T  65484 tgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctgcaatcttagacgagtttg 65385  T
Q  138 tatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
     ||||| ||||  | ||||  |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  65384 aatccttgaaat-agcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgac 65289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 234
Target Start/End: Complemental strand, 144529 - 144334
Alignment:
Q  47 tgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctgttgctatacttttccagtcttctgcaattttaggcgagtttg 137  Q
    |||||||||| |||||| |||||||||||||||||         |||||||| ||  ||||||||||||||||||||||||||||| |||| ||||||||    
T  144529 tgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctgcaatcttagacgagtttg 144430  T
Q  138 tatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
     ||||| ||||  | ||||  |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  144429 aatccttgaaat-agcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgac 144334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 165048 - 164966
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  165048 acagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 164966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 215599 - 215358
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  215599 acagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 215500  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || ||||||  ||||||| ||||||||||||| ||||| |||||||| |||| |  ||||| ||||  ||| |||  ||| ||||||||||| |||||||    
T  215499 gccgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatcc-attaaacagcttttgaagttttaagttgcatctcctgataaactgca 215401  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||  |  ||||| || ||||||||||||||||    
T  215400 gcttctggtgattttcggcttctgataaacttgcttctgatga 215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7390 - 7622
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||||||||||||| |||||||||||||||| |||||  ||| |||||||||||| ||||||| |||| |||||     
T  7390 acagagtagtggaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgatgaattagcatccaatgcatttcaaactagccgttgcc 7489  T
Q  101 atacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | ||| || |||||||||| ||||| |||||||||| |  |||| | ||||||||||  ||   ||| ||| |||||| |||||||||  ||||||||||    
T  7490 acactctttcagtcttctgtaatttctaggcgagttagagtccttg-aaacaacttttgaaaacttgagttccatctcttgatgaactaaagcttctggt 7588  T
Q  200 gattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| || | ||||| |||||||||||||||||||    
T  7589 gatacatagcttctgatgaacttgcttctgatga 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 5426 - 5209
Alignment:
Q  2 cagagtaatggagttagtggttgtacacttcg-tacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    ||||||| ||||  ||||||||||||||||   |||| |||||||||||||||||| |||||| |||| ||||||||||| ||||||||||||||||||     
T  5426 cagagtagtggaagtagtggttgtacacttttctacatacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagctgttgcc 5327  T
Q  101 atacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggt 199  Q
    | || |||||||||||||||||| |||||||||||| |  ||||  |||||| ||||  || || |  |||  |||||||||||||||||||||||||||    
T  5326 acacatttccagtcttctgcaatctttaggcgagttagagtcct-taaaacagcttttgaaactataagttcaatctcctgatgaactgcagcttctggt 5228  T
Q  200 gattcacaacttctaatga 218  Q
    ||| |||| ||||| ||||    
T  5227 gatacacagcttctgatga 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 234
Target Start/End: Complemental strand, 78453 - 78226
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||         |||||||||||||  ||||||  ||||    
T  78453 tagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactt 78354  T
Q  107 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattca 205  Q
    ||||||||||||||||| ||||| |||||||| |||| |  ||| | ||||  |||||||  | | |||||| ||||||||| ||||||||||||||||     
T  78353 ttccagtcttctgcaatctttagacgagtttgaatccga-taaatagcttttgaagctttaagctgcatctcatgatgaactacagcttctggtgattct 78255  T
Q  206 caacttctaatgaacttgcttctgatgac 234  Q
    ||  |||| ||||||||||||||||||||    
T  78254 cagattctgatgaacttgcttctgatgac 78226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 3313 - 3554
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||| | ||||| |||||||||||||||| ||||||||||||||| |||||||| |||||| ||||| |||||||||         |||| |||||||    
T  3313 acagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaata 3412  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || |||| |||||||||||| ||||||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||||||||||||||||  |    
T  3413 gccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactata 3511  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||||  || ||||| || ||||||||||||||||    
T  3512 gcttctggtgattttcagcttctgataaacttgcttctgatga 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 6840 - 6601
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagc 93  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||| ||| |||||| || ||||||||||||||         |||||||||||     
T  6840 agagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagt 6741  T
Q  94 tgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagc 192  Q
     | ||||  |||||||||||||||||||||  |||| | |||||| ||||    ||||| ||||  |||||||  ||| |||||||||||||||| ||||    
T  6740 cggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatcc-gttaaacagcttttgaagctttaagttgcatctcctgatgaactacagc 6642  T
Q  193 ttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||| || ||||| || ||||||||||||||||    
T  6641 ttctggtgattctcagcttctgataaacttgcttctgatga 6601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 87702 - 87578
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgct 100  Q
    |||||||| ||||  |||||||||||||||||||||| |||||||||||||||||| |||||| |||  ||||||||||| |||||||||||  |||||     
T  87702 acagagtagtggaagtagtggttgtacacttcgtacagacgtactatgtcaacgctctttgaagaatttgcatccaatgcatttcaaaatagtcgttgcc 87603  T
Q  101 atacttttccagtcttctgcaattt 125  Q
    |||||||| ||||||||||||||||    
T  87602 atactttttcagtcttctgcaattt 87578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 105 - 236
Target Start/End: Complemental strand, 23551 - 23421
Alignment:
Q  105 ttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattc 204  Q
    ||||||||||||||||||| |||| |||||||| ||||| |||| || ||||  |||||||  ||| |||||||||||||||||||||||||||||||||    
T  23551 ttttccagtcttctgcaatcttagacgagtttgaatccttgaaa-cagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc 23453  T
Q  205 acaacttctaatgaacttgcttctgatgacgt 236  Q
    ||| ||||| |||||||||||| |||||||||    
T  23452 acagcttctgatgaacttgcttttgatgacgt 23421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 25501 - 25415
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaa 87  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||  |||||||||| |||||    
T  25501 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataactatccaatgcccttcaa 25415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 234
Target Start/End: Complemental strand, 5700 - 5459
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctg 95  Q
    |||| ||||| ||||||||||||||||| || ||| ||||| |||||||||| |||||| |||||||||| ||||||||         ||||||||| ||    
T  5700 agtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcctttcaaaatagttg 5601  T
Q  96 ttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaa---ctgcag 191  Q
    ||||| |||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||||  || ||||   || ||||| ||||||||   | ||||    
T  5600 ttgctttacttttccagtcttctgcaatctttagacgagtttgaatcc-attaaacaacttttgaatctttaaattgcatcttctgatgaacagcagcag 5502  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatgac 234  Q
    ||||||||||||| || ||||| || |||||||||||||||||    
T  5501 cttctggtgattctcagcttctgataaacttgcttctgatgac 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 99307 - 99069
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||         |||| |||||||    
T  99307 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcagcgc--tttgaagaataagcatccaatgccttgtaatccttccaaaata 99210  T
Q  92 gctgttgctatacttttccagtcttctgcaattttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcag 191  Q
    |  |||||||||||||||| ||| ||||||| ||||| |||||||| ||||    ||||| ||||  |||||||  ||| ||  |||||||||||| ||     
T  99209 gtcgttgctatacttttccggtcatctgcaactttagacgagtttgaatcc-gttaaacagcttttgaagctttaagttgcacttcctgatgaactacaa 99111  T
Q  192 cttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    |||||||||||   || ||||| || ||||||||||||||||    
T  99110 cttctggtgatcttcagcttctgataaacttgcttctgatga 99069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 19559 - 19433
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||  || || ||||||||||||         ||||||||||||| |||||||  |||     
T  19559 tagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaaatcctttcaaaatagttgttgcttcactc 19460  T
Q  107 ttccagtcttctgcaatt-ttaggcga 132  Q
    ||| |||||||||||||| ||||||||    
T  19459 ttctagtcttctgcaattcttaggcga 19433  T

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Target: scaffold0004 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 211407 - 211612
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||         |||| |||||||    
T  211407 acagagtagtggaggtagtagttgtatacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaatccttacaaaata 211506  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    |  ||||||||||||||||||||||||||||| ||||| |||||||| ||||    ||||||||||  |||||||  | | ||||||||||||| || ||    
T  211507 gtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcc-gttaaacaacttttgaagctttaagctgcatctcctgatgagctaca 211605  T
Q  191 gcttctg 197  Q
    |||||||    
T  211606 gcttctg 211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 220250 - 220326
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    ||||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  ||||| |||||||||||||    
T  220250 gagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgc 220326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 377658 - 377579
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||| ||| ||  || || ||||||||||||||||    
T  377658 gagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgcctt 377579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 244386 - 244308
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 79  Q
    |||||||| ||||| |||||||||||||||||||||||  || || | |||||||| ||  || || ||||||||||||    
T  244386 acagagtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccaatg 244308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 246215 - 246103
Alignment:
Q  125 ttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgc 224  Q
    ||||||||||||| ||||| |||| |||||||  |||||||  ||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  246215 ttaggcgagtttgaatccttgaaa-caacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgc 246117  T
Q  225 ttctgatgacgtca 238  Q
    ||||||||||||||    
T  246116 ttctgatgacgtca 246103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 212363 - 212442
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || || |||||||||||||    
T  212363 acagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 212442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2832 - 2702
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg--------cctttcaaaatag 92  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||| ||||||||||        |||| ||||||||    
T  2832 acagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaatacgcatccaatgctttccaaccttccaaaatag 2733  T
Q  93 ctgttgctatacttttccagtcttctgcaat 123  Q
      ||||| |||||||||||||||||||||||    
T  2732 tcgttgcaatacttttccagtcttctgcaat 2702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 1786 - 1598
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||| || || |||||| ||||||         |||||||||  ||||||  ||||    
T  1786 tagtggttgtacacttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcctttcaaaatagtcgttgcttcactt 1687  T
Q  107 ttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttc 195  Q
    ||| ||||||||||||| ||||  |||||||| |||| |  ||||| ||||  |||||||| ||| ||||||||||||||||||||||||    
T  1686 ttcaagtcttctgcaatatttaaacgagtttgaatcc-attaaacagcttttgaagctttgagttgcatctcctgatgaactgcagcttc 1598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 515 - 467
Alignment:
Q  190 agcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||  || ||||| ||||||||||||||||||||||||    
T  515 agcttctggtgattttcagcttctgatgaacttgcttctgatgacgtca 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 733 - 933
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc-ctttcaaaatagctgttgc 99  Q
    |||||||| || || ||||| |||||||||||||||||||| ||||||||||||||  ||||  ||||||||||||||||  |||||||||||| ||||     
T  733 acagagtagtgcagatagtgattgtacacttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttgt 832  T
Q  100 tatacttttccagtcttctgcaatttt--aggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctg 197  Q
    || |||||   ||||||||||||||||   |||||| ||| ||||| | ||||| ||||  ||||||| ||||  ||||  |||||| ||||||||||||    
T  833 ta-actttcaaagtcttctgcaatttttctggcgagcttgaatccttg-aaacagcttttgaagctttaggtt-gatcttttgatgatctgcagcttctg 929  T
Q  198 gtga 201  Q
    ||||    
T  930 gtga 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 90157 - 89911
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| ||| ||||||||||||||||||   ||| | |||||||||| |||||| || ||||||||||||         ||||||||||||    
T  90157 acagagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaata 90058  T
Q  92 gctgttgctatacttttccagtcttctgcaat-tttaggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgca 190  Q
    || |||| |  ||| ||||||||||||| |||  |||| |||| ||  || | |   | |||| ||  |||||||  ||| |||||||||||||||||||    
T  90057 gccgttggttcactcttccagtcttctgtaatacttagacgagattaaatac-attgatcaacctttgaagctttaagttgcatctcctgatgaactgca 89959  T
Q  191 gcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||||||||||||  || ||||| ||||||||||||||||||||||||    
T  89958 gcttctggtgattttcagcttctgatgaacttgcttctgatgacgtca 89911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 447 - 365
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  447 acagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 49344 - 49423
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  49344 gagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 49423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 32497 - 32549
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  32497 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 32549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 233
Target Start/End: Original strand, 11447 - 11611
Alignment:
Q  69 agcatccaatgcctttcaaaatagctgttgctatacttttccagtcttctgcaattt-taggcgagtttgtatcctagaaaacaactttcaaagctttgg 167  Q
    |||||||||||| ||||||| |||| ||||| | ||| ||||||||||||| ||||| |||||||||| |  |||| ||||  || ||| ||| ||| |     
T  11447 agcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacaaattttgaaaactt-ga 11545  T
Q  168 gttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatga 233  Q
    ||| |||||| |||||||||||||||||||||||| || | ||| | |||||||||||| ||||||    
T  11546 gttccatctcttgatgaactgcagcttctggtgatacatagcttatgatgaacttgcttttgatga 11611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 27531 - 27400
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt---------tcaaaata 91  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| |  ||||||||||||||||         ||||||||    
T  27531 acagagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctttgaagagcaagcatccaatgccttcgaatcctatcaaaata 27432  T
Q  92 gctgttgctatacttttccagtcttctgcaat 123  Q
    |||||||||  ||| || ||||||||||||||    
T  27431 gctgttgcttcactctttcagtcttctgcaat 27400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15724 - 15642
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||||| |||||| ||| ||||||  ||||||||||||||||||    
T  15724 acagagtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgcctt 15642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 38187 - 38105
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||| |||||||||||||  ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  38187 acagagtagtggaggtagtggtcgtacacttcgtacggacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 38105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21073 - 20991
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||  ||| ||||| |||||| |||||||||||||||||||    
T  21073 acagagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaataagcatccaatgcctt 20991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 12221 - 12349
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc---------ctttcaaaatagct 94  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  || ||||||||||||||||         |||||||||||| |    
T  12221 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaattctttcaaaatagtt 12320  T
Q  95 gttgctatacttttccagtcttctgcaat 123  Q
    ||||||  ||| |||||||||||||||||    
T  12321 gttgcttcactcttccagtcttctgcaat 12349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 7715 - 7795
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgccttt 84  Q
    ||||| ||||| |||||||||||||||||||||||  ||||| |||||||||| |||||| ||||| ||| ||||||||||    
T  7715 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatacaatgccttt 7795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 487 - 566
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||||||    
T  487 gagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 11929 - 12000
Alignment:
Q  167 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| ||||| ||||||||||| |||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  11929 ggttgcatcttctgatgaactgtagcttctggtgatatacaacttttgatgaacttgcttctgatgacgtca 12000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 22685 - 22816
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaata 91  Q
    |||||||| ||||| |||||||||||| |||| |||||  ||||| ||||||| || |||||| |||||||||||||||         ||||||||||||    
T  22685 acagagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaataagcatccaatgccttcaaatcctttcaaaata 22784  T
Q  92 gctgttgctatacttttccagtcttctgcaat 123  Q
    |  ||||||  |||||||||||||||||||||    
T  22785 gtcgttgcttcacttttccagtcttctgcaat 22816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 22867 - 22924
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctg 229  Q
    |||||||||||||||| |||| |||||||||   || ||||| |||||||||||||||    
T  22867 catctcctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 103585 - 103712
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcc---------tttcaaaatagctg 95  Q
    |||| ||||| ||||||||| |||||||||||||  ||||| |||||||||| |||||| || ||||||||||||||         |||||||||||| |    
T  103585 agtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttaatatcatttcaaaatagccg 103684  T
Q  96 ttgctatacttttccagtcttctgcaat 123  Q
    |||||  ||| |||||||||||||||||    
T  103685 ttgcttcactcttccagtcttctgcaat 103712  T

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Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 1895 - 1817
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| ||||||| |||||||||||| | ||||||| |||||||||| ||||||  ||||||||||||||||||    
T  1895 agtagtggaggtagtggtcgtacacttcgtatagacgtactttgtcaacgctctttgaaggataagcatccaatgcctt 1817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10210 - 10128
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| ||||||| |||||||||||||||  ||||| |||||||||| ||| || || ||||||||||||||||    
T  10210 acagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctttaaaaaacaagcatccaatgcctt 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14874 - 14819
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||||||| ||||| ||||||| |||||||||||||||  ||||| ||||||||||    
T  14874 acagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgct 14819  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 60040 - 60157
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagctgttgctatactt 106  Q
    |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||         |||||||||||||  ||||||  ||||    
T  60040 tagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatggcttcaaatcctttcaaaatagtcgttgcttcactt 60139  T
Q  107 ttccagtcttctgcaatt 124  Q
    ||||||||||||||||||    
T  60140 ttccagtcttctgcaatt 60157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 7944 - 8013
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg 79  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||| ||  || || ||||||||||||    
T  7944 tggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg 8013  T

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Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 10744 - 10958
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaaatagctgttgctatacttttccagtct 115  Q
    ||||||||||||| |||||||| ||  |  ||||||||||| |||||  |  |||||||| |||| ||||||| || | ||||  | ||||| | |||||    
T  10744 tagtggttgtacagttcgtacatactcataatgtcaacgctctttgaggataaagcatcctatgcttttcaaactatccgttgtca-actttccaagtct 10842  T
Q  116 tctgcaatttta--ggcgagtttgtatcctagaaaacaactttcaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttct 213  Q
    |||||||| ||   || ||| ||| ||||| |||| |||||||  ||||||| ||||  ||||  |||| | ||||||||||||||||| ||||||||||    
T  10843 tctgcaatctttctggtgagcttgaatccttgaaa-caacttttgaagctttaggttg-atcttatgataatctgcagcttctggtgatacacaacttct 10940  T
Q  214 aatgaacttgcttctgat 231  Q
     |||||||||||||||||    
T  10941 gatgaacttgcttctgat 10958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 20814 - 20859
Alignment:
Q  186 ctgcagcttctggtgattcacaacttctaatgaacttgcttctgat 231  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  20814 ctgcagcttctggtgatacacaacttctgatgaacttgcttctgat 20859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 20314 - 20248
Alignment:
Q  173 atctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatgacgtca 238  Q
    |||| ||||||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||    
T  20314 atcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtca 20248  T

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Target: scaffold0908 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3997 - 3910
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctttcaaa 88  Q
    |||||| | ||||| ||||||| |||||||||||||| | ||||| |||||||||| |||| |  || ||||||||| ||||||||||    
T  3997 acagagaagtggaggtagtggtcgtacacttcgtacagatgtactttgtcaacgctctttgtaggatgagcatccaaagcctttcaaa 3910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 13583 - 13662
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||| ||||||  |||||||||||||||| ||  || || || |||||||||||||    
T  13583 gagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgcctt 13662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 5789 - 5710
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||| ||||||||||||||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  5789 gagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgcctt 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 35401 - 35472
Alignment:
Q  167 ggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatgacgtca 238  Q
    |||| ||||| |||||||| || ||||||| |||||  ||| ||||| ||||||||||||||||||||||||    
T  35401 ggttgcatcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttctgatgacgtca 35472  T

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Target: scaffold1747 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1326 - 1408
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  1326 acagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 85 - 3
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| | | |||||||| ||  || |||||||||| ||||||||    
T  85 acagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36877 - 36795
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| | ||| |||||||||||||||||||||||  || || ||||||| || ||| || || ||||||||||||||||    
T  36877 acagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgcctt 36795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 42128 - 42210
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||| | ||| |||||||||||||||||||||||  || || ||||||| || ||| || || ||||||||||||||||    
T  42128 acagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgcctt 42210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 238
Target Start/End: Complemental strand, 36644 - 36615
Alignment:
Q  209 cttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||||||||||||||||    
T  36644 cttctaatgaacttgcttctgatgacgtca 36615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 42361 - 42390
Alignment:
Q  209 cttctaatgaacttgcttctgatgacgtca 238  Q
    ||||||||||||||||||||||||||||||    
T  42361 cttctaatgaacttgcttctgatgacgtca 42390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 1703 - 1781
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||||||||||||||||||  ||||| |||||||||| ||  ||  | ||||||||||||||||    
T  1703 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagtacaagcatccaatgcctt 1781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 5044 - 4967
Alignment:
Q  6 gtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||| ||||||||||||||||| |||||  ||||| |||||||||| | | || || || |||||||||||||    
T  5044 gtaatggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctataaagaacaaacatccaatgcctt 4967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 1610 - 1538
Alignment:
Q  162 ctttgggttacatctcctgatgaactgcagcttctggtgattcacaacttctaatgaac-ttgcttctgatga 233  Q
    |||| |||| ||||| ||||||||||  ||||||||||||| |||| ||||| |||||| |||||||||||||    
T  1610 ctttaggttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactttgcttctgatga 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 6018 - 6098
Alignment:
Q  3 agagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||| | ||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || || ||||||||||||||||    
T  6018 agagtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 14660 - 14788
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatg---------cctttcaaaatagct 94  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||| |||||||||| ||  ||  | ||||||||||||         ||||||||||||| |    
T  14660 gagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcctttcaaaatagtt 14759  T
Q  95 gttgctatacttttccagtcttctgcaat 123  Q
    ||||||  ||| |||||||||||||||||    
T  14760 gttgcttcactcttccagtcttctgcaat 14788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 39616 - 39676
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatg 232  Q
    ||||||||||||||||  |||||||||||||   || ||||| ||||||||||||||||||    
T  39616 catctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 39676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 137676 - 137736
Alignment:
Q  172 catctcctgatgaactgcagcttctggtgattcacaacttctaatgaacttgcttctgatg 232  Q
    ||||||||||||||||  |||||||||||||   || ||||| ||||||||||||||||||    
T  137676 catctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9978 - 10057
Alignment:
Q  1 acagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||||||| ||||| |||||||||||||||| ||||||  ||||| ||| |||||| ||  || | ||||||||||||||    
T  9978 acagagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagtaagcatccaatgc 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 9968 - 10047
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  9968 gagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatcgaatgcctt 10047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 18720 - 18641
Alignment:
Q  4 gagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||| ||||| |||||||||||||||||||| ||  ||||| |||||||||| ||  || || ||| ||||||||||||    
T  18720 gagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaacaagtatccaatgcctt 18641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 18539 - 18511
Alignment:
Q  174 tctcctgatgaactgcagcttctggtgat 202  Q
    |||||||||||||||||||||||||||||    
T  18539 tctcctgatgaactgcagcttctggtgat 18511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 1673 - 1748
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgc 80  Q
    |||| ||||| ||||||||||||||||| |||||  ||||| |||||||||| ||  || | ||||||||||||||    
T  1673 agtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagtaagcatccaatgc 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 15130 - 15181
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    |||| ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  15130 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 15181  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 26062 - 25995
Alignment:
Q  16 tagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    ||||||||||||||||| |||||  ||||||||||||| || ||  || || ||||||||||||||||    
T  26062 tagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaacaagcatccaatgcctt 25995  T

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Target: scaffold0530 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 2088 - 2042
Alignment:
Q  10 tggagttagtggttgtacacttcgtacaaacgtactatgtcaacgct 56  Q
    ||||| |||||||||||||||||||||||  ||||| ||||||||||    
T  2088 tggagatagtggttgtacacttcgtacaattgtactttgtcaacgct 2042  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 15819 - 15885
Alignment:
Q  18 gtggttgtacacttcgtacaaac-gtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||||||||||||||||||||   |||||||||||||||| ||  || || ||||||||||||||||    
T  15819 gtggttgtacacttcgtacaatttgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 15885  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 9916 - 9994
Alignment:
Q  5 agtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaataataagcatccaatgcctt 83  Q
    |||| ||||| |||||||| ||||||||||||||  ||||| |||||||||| ||  || || ||||||| ||||||||    
T  9916 agtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgcctt 9994  T

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