View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9858_high_12 (Length: 271)

Name: NF9858_high_12
Description: NF9858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9858_high_12
NF9858_high_12
[»] chr7 (35 HSPs)
chr7 (89-260)||(42547748-42547919)
chr7 (96-260)||(42552002-42552166)
chr7 (16-85)||(33378837-33378906)
chr7 (16-85)||(48341357-48341426)
chr7 (17-85)||(48314118-48314186)
chr7 (16-85)||(8419596-8419665)
chr7 (16-85)||(9946997-9947066)
chr7 (16-85)||(11329988-11330057)
chr7 (16-85)||(25924644-25924713)
chr7 (16-85)||(27213862-27213931)
chr7 (16-85)||(27248288-27248357)
chr7 (16-85)||(39554178-39554247)
chr7 (16-85)||(40212884-40212953)
chr7 (16-85)||(43949240-43949309)
chr7 (16-85)||(45045621-45045690)
chr7 (16-85)||(48160598-48160667)
chr7 (16-85)||(27419231-27419300)
chr7 (16-85)||(28904193-28904262)
chr7 (16-85)||(35488196-35488265)
chr7 (16-85)||(38544189-38544258)
chr7 (16-85)||(41632371-41632440)
chr7 (17-85)||(45265055-45265123)
chr7 (16-85)||(25098064-25098133)
chr7 (20-85)||(38396373-38396438)
chr7 (16-85)||(44566040-44566109)
chr7 (16-85)||(45448937-45449006)
chr7 (25-85)||(45723211-45723271)
chr7 (30-85)||(9814225-9814280)
chr7 (16-85)||(16825361-16825430)
chr7 (21-85)||(34930472-34930537)
chr7 (16-85)||(41684029-41684098)
chr7 (17-85)||(43445890-43445958)
chr7 (16-85)||(25045625-25045693)
chr7 (16-85)||(44820249-44820318)
chr7 (17-85)||(6656231-6656299)
[»] chr1 (41 HSPs)
chr1 (142-260)||(26008278-26008396)
chr1 (16-85)||(2430492-2430561)
chr1 (16-85)||(3572572-3572641)
chr1 (16-85)||(36361778-36361847)
chr1 (16-85)||(1597349-1597418)
chr1 (16-85)||(2632848-2632917)
chr1 (16-85)||(6978766-6978835)
chr1 (16-85)||(9115833-9115902)
chr1 (16-85)||(25789759-25789828)
chr1 (16-85)||(39930453-39930522)
chr1 (16-85)||(46666704-46666773)
chr1 (16-85)||(6911489-6911558)
chr1 (16-85)||(9831877-9831946)
chr1 (16-85)||(14788719-14788788)
chr1 (16-85)||(20260093-20260162)
chr1 (16-85)||(38964686-38964755)
chr1 (16-85)||(39329604-39329673)
chr1 (16-85)||(47037453-47037522)
chr1 (16-85)||(49822924-49822993)
chr1 (16-85)||(52630769-52630838)
chr1 (18-85)||(8332012-8332079)
chr1 (16-85)||(4683381-4683450)
chr1 (16-85)||(12190184-12190253)
chr1 (16-85)||(32824918-32824987)
chr1 (16-81)||(48916033-48916098)
chr1 (16-85)||(51445087-51445156)
chr1 (22-85)||(5806298-5806361)
chr1 (16-83)||(37436630-37436697)
chr1 (16-85)||(1007743-1007812)
chr1 (16-85)||(5518511-5518580)
chr1 (16-81)||(35187452-35187517)
chr1 (29-85)||(32202338-32202394)
chr1 (16-85)||(29091662-29091731)
chr1 (16-85)||(31806763-31806832)
chr1 (16-85)||(50190772-50190841)
chr1 (16-85)||(13653847-13653916)
chr1 (16-85)||(30241005-30241074)
chr1 (16-85)||(52699473-52699542)
chr1 (16-85)||(11014448-11014517)
chr1 (16-85)||(37261843-37261912)
chr1 (16-85)||(52186053-52186122)
[»] chr3 (24 HSPs)
chr3 (16-85)||(6231508-6231577)
chr3 (16-85)||(24574570-24574639)
chr3 (16-85)||(26849017-26849086)
chr3 (16-85)||(40908260-40908329)
chr3 (16-85)||(11239127-11239196)
chr3 (16-85)||(33217920-33217989)
chr3 (16-85)||(44952303-44952372)
chr3 (17-85)||(28124443-28124511)
chr3 (16-85)||(8476315-8476384)
chr3 (16-85)||(9320455-9320524)
chr3 (16-85)||(20297788-20297857)
chr3 (16-85)||(31435930-31435999)
chr3 (16-85)||(47114864-47114933)
chr3 (16-85)||(1099193-1099262)
chr3 (16-85)||(43132164-43132233)
chr3 (16-85)||(48339764-48339833)
chr3 (17-85)||(20414472-20414540)
chr3 (30-85)||(43715315-43715370)
chr3 (16-73)||(31611004-31611061)
chr3 (16-84)||(53165733-53165801)
chr3 (16-54)||(46359947-46359985)
chr3 (16-77)||(10822733-10822794)
chr3 (16-85)||(26849165-26849231)
chr3 (17-85)||(28693433-28693501)
[»] chr2 (36 HSPs)
chr2 (16-85)||(6171786-6171855)
chr2 (16-85)||(346352-346421)
chr2 (16-85)||(2050861-2050930)
chr2 (16-85)||(39995138-39995207)
chr2 (16-85)||(2521670-2521739)
chr2 (16-85)||(4559554-4559623)
chr2 (16-85)||(5770117-5770186)
chr2 (16-85)||(9733853-9733922)
chr2 (16-85)||(11071600-11071669)
chr2 (16-85)||(21737407-21737476)
chr2 (16-85)||(42674668-42674737)
chr2 (16-85)||(14777505-14777574)
chr2 (16-85)||(17965978-17966047)
chr2 (16-85)||(28311704-28311773)
chr2 (16-85)||(37192517-37192586)
chr2 (16-85)||(37533947-37534016)
chr2 (16-85)||(41729137-41729206)
chr2 (16-85)||(638588-638657)
chr2 (16-85)||(20426490-20426559)
chr2 (20-85)||(34356707-34356772)
chr2 (16-85)||(37233424-37233493)
chr2 (16-85)||(41750524-41750593)
chr2 (16-85)||(45409245-45409314)
chr2 (16-85)||(40950866-40950935)
chr2 (17-85)||(13760941-13761009)
chr2 (16-85)||(6571682-6571751)
chr2 (16-85)||(27357970-27358039)
chr2 (17-85)||(14832806-14832874)
chr2 (25-85)||(26310273-26310333)
chr2 (16-85)||(1988306-1988375)
chr2 (16-77)||(14253517-14253578)
chr2 (16-85)||(18713664-18713733)
chr2 (16-85)||(3902451-3902520)
chr2 (16-85)||(25455019-25455088)
chr2 (16-85)||(40570015-40570084)
chr2 (17-81)||(11763382-11763446)
[»] scaffold0006 (2 HSPs)
scaffold0006 (16-85)||(201920-201989)
scaffold0006 (16-85)||(143608-143677)
[»] chr8 (24 HSPs)
chr8 (16-85)||(3050004-3050073)
chr8 (16-85)||(18726626-18726695)
chr8 (16-85)||(37392553-37392622)
chr8 (16-85)||(1554361-1554430)
chr8 (16-85)||(12710640-12710709)
chr8 (16-85)||(25837906-25837975)
chr8 (16-85)||(26601945-26602014)
chr8 (16-85)||(32660940-32661009)
chr8 (16-85)||(35818431-35818500)
chr8 (16-85)||(38364076-38364145)
chr8 (16-85)||(10896224-10896293)
chr8 (16-85)||(16313514-16313583)
chr8 (16-85)||(18298107-18298176)
chr8 (16-85)||(26062139-26062208)
chr8 (16-85)||(38132744-38132813)
chr8 (16-85)||(41228721-41228790)
chr8 (16-85)||(42755862-42755931)
chr8 (16-85)||(35394385-35394454)
chr8 (17-85)||(7931235-7931303)
chr8 (17-85)||(40197083-40197151)
chr8 (16-85)||(7317368-7317437)
chr8 (16-85)||(21137139-21137208)
chr8 (16-85)||(33444633-33444702)
chr8 (16-85)||(29421496-29421565)
[»] chr6 (9 HSPs)
chr6 (16-85)||(7053577-7053646)
chr6 (16-85)||(1317013-1317082)
chr6 (16-85)||(2657695-2657764)
chr6 (16-85)||(8029328-8029397)
chr6 (16-85)||(14171008-14171077)
chr6 (16-85)||(16968920-16968989)
chr6 (16-85)||(18897916-18897985)
chr6 (16-82)||(7344093-7344159)
chr6 (16-85)||(6705772-6705841)
[»] chr5 (20 HSPs)
chr5 (16-85)||(4765567-4765636)
chr5 (16-85)||(11855662-11855731)
chr5 (16-85)||(12970537-12970606)
chr5 (16-85)||(18412204-18412273)
chr5 (16-85)||(19065512-19065581)
chr5 (16-85)||(22935919-22935988)
chr5 (16-85)||(28602550-28602619)
chr5 (16-85)||(555713-555782)
chr5 (16-85)||(6091710-6091779)
chr5 (16-85)||(14206828-14206897)
chr5 (16-85)||(8406889-8406958)
chr5 (16-85)||(29543022-29543091)
chr5 (16-85)||(27481352-27481421)
chr5 (16-85)||(36703869-36703938)
chr5 (16-71)||(8646412-8646467)
chr5 (16-85)||(32535932-32536001)
chr5 (16-86)||(27481004-27481074)
chr5 (31-81)||(6930654-6930704)
chr5 (16-85)||(42012186-42012255)
chr5 (17-85)||(15200553-15200621)
[»] chr4 (36 HSPs)
chr4 (16-85)||(45747803-45747872)
chr4 (16-85)||(48518898-48518967)
chr4 (16-85)||(18405241-18405310)
chr4 (16-85)||(27762906-27762975)
chr4 (16-85)||(39730300-39730369)
chr4 (16-85)||(40435899-40435968)
chr4 (16-85)||(43723263-43723332)
chr4 (16-85)||(48879324-48879393)
chr4 (16-85)||(936125-936194)
chr4 (16-85)||(6279928-6279997)
chr4 (16-85)||(13229996-13230065)
chr4 (16-85)||(23686786-23686855)
chr4 (16-85)||(27555409-27555478)
chr4 (16-85)||(34049604-34049673)
chr4 (16-85)||(35999685-35999754)
chr4 (16-85)||(41859054-41859123)
chr4 (16-85)||(25916042-25916109)
chr4 (16-85)||(25932440-25932509)
chr4 (16-85)||(39835314-39835383)
chr4 (16-81)||(41744231-41744296)
chr4 (16-85)||(42773947-42774016)
chr4 (16-85)||(45596267-45596336)
chr4 (16-85)||(47670361-47670430)
chr4 (16-85)||(55968007-55968076)
chr4 (21-85)||(27942747-27942811)
chr4 (20-85)||(18931756-18931821)
chr4 (16-85)||(30415901-30415970)
chr4 (16-85)||(32953522-32953591)
chr4 (16-85)||(39498824-39498893)
chr4 (16-85)||(39502163-39502232)
chr4 (16-80)||(8322244-8322308)
chr4 (32-85)||(34237427-34237480)
chr4 (16-71)||(50672927-50672981)
chr4 (16-85)||(10400812-10400881)
chr4 (18-86)||(9327251-9327319)
chr4 (18-86)||(9374010-9374078)
[»] scaffold0189 (1 HSPs)
scaffold0189 (16-85)||(28959-29028)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 89 - 260
Target Start/End: Complemental strand, 42547919 - 42547748
Alignment:
Q  89 gtgtgacatatgctcgtacttcaaatcaattcatcaaaaatatttcccatgtcaaacttacaattattacattcgatagccttaacaacctcttgaaatg 188  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42547919 gtgtgacatatgctcctacttcaaatcaattcatcaaaaatatttcccatgtcaaacttacaattattacattctatagccttaacaacctcttgaaatg 42547820  T
Q  189 ctgaaacactacatggaactaccaagccattcttctgttcaaacccaaattcattgtatgctttctccaaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42547819 ctgaaacactacatggaactaccaagccattcttctgttcaaacccaaattcattgtatgctttctccaaca 42547748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 96 - 260
Target Start/End: Complemental strand, 42552166 - 42552002
Alignment:
Q  96 atatgctcgtacttcaaatcaattcatcaaaaatatttcccatgtcaaacttacaattattacattcgatagccttaacaacctcttgaaatgctgaaac 195  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || || ||||||||||||||    
T  42552166 atatgcacttacttcaaatcaattcatcaaaaatatttcccatgtcaaacttacaattgttacattctatagcattaaccacttcatgaaatgctgaaac 42552067  T
Q  196 actacatggaactaccaagccattcttctgttcaaacccaaattcattgtatgctttctccaaca 260  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  42552066 actacatggaactaccaagccattcctctgttcaaatccaaattcattgtatgctttctccaaca 42552002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 33378837 - 33378906
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  33378837 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 33378906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 48341357 - 48341426
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  48341357 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 48341426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 48314118 - 48314186
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  48314118 taacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 48314186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 8419665 - 8419596
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  8419665 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 8419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 9947066 - 9946997
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  9947066 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaaaaattataactttaaacaaa 9946997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 11329988 - 11330057
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  11329988 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 11330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 25924713 - 25924644
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  25924713 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 25924644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 27213931 - 27213862
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  27213931 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 27213862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 27248288 - 27248357
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  27248288 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 27248357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 39554178 - 39554247
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  39554178 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 39554247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 40212884 - 40212953
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  40212884 gtaacaaacataggcatatacattcctatcattttattcccgcgaatcaacaattataacttgaaacaaa 40212953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 43949240 - 43949309
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  43949240 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 43949309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 45045621 - 45045690
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  45045621 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttaaaacaaa 45045690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 48160667 - 48160598
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  48160667 gtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 48160598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 27419300 - 27419231
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||    
T  27419300 gtaacaaacataggcatatacatttctatcattttattcccgggaatcagcaattataacttgaaacaaa 27419231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 28904262 - 28904193
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||    
T  28904262 gtaacaaacatagacatatacatttctatcattttattctcgggaatcaacaattataacttaaaacaaa 28904193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 35488265 - 35488196
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  35488265 gtaacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaa 35488196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 38544189 - 38544258
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  38544189 gtaataaacataggcatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaa 38544258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 41632440 - 41632371
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  41632440 gtaataaacataggcatatacatttctatcattttattctcaggaatcaacaattataacttgaaacaaa 41632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 45265123 - 45265055
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||| |||||||||||||||||||    
T  45265123 taacaaacataggcatatacattccaatcattttattcccgagaatcaacaattataacttgaaacaaa 45265055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25098064 - 25098133
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||| ||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  25098064 gtaacaaacatgggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaa 25098133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 38396438 - 38396373
Alignment:
Q  20 caaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  38396438 caaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttggaacaaa 38396373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 44566040 - 44566109
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||    
T  44566040 gtaacaaacatagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaa 44566109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 45448937 - 45449006
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||| ||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  45448937 gtaacaaacatagacatctacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaa 45449006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 45723211 - 45723271
Alignment:
Q  25 ataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  45723211 ataggcatatatattcctatcattttattctcgggaatcaacaaatataacttgaaacaaa 45723271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 9814280 - 9814225
Alignment:
Q  30 catatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9814280 catatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 9814225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 16825430 - 16825361
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| ||||||||||||||   ||||| || |||||||||||||||||||    
T  16825430 gtaacaaacataggcatatacatttctatcattttattcctaggaattaacaattataacttgaaacaaa 16825361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 34930537 - 34930472
Alignment:
Q  21 aaacataggcatatacattcctatcattttattctcgggaatcaataattataac-ttgaaacaaa 85  Q
    ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||| ||||||||||    
T  34930537 aaacataggcatatacatttctatcattttattcccaggaatcaacaattataactttgaaacaaa 34930472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 41684098 - 41684029
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||  |||||| ||| ||||||| |||||||| |||||||| || ||||||||||||||||    
T  41684098 gtaacaaacataaacatatatatttctatcatattattctcaggaatcaacaaatataacttgaaacaaa 41684029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 43445958 - 43445890
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||| |||||||||||||||  ||| ||||||||| |  ||||| |||| ||||||||||||||||    
T  43445958 taacaaatataggcatatacatttttataattttattcgcaagaatctataaatataacttgaaacaaa 43445890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 25045693 - 25045625
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| ||||||| ||||||||| ||||| || |  ||||||| || ||||||||||||||||    
T  25045693 gtaacaaacatatgcatatatattcctatcttttta-tccccagaatcaacaaatataacttgaaacaaa 25045625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 44820249 - 44820318
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||| |  || ||||||| ||||||||||||||  |  |||||| |||||||||||||||||||    
T  44820249 gtaacaaacacatacaaatacatttctatcattttattcctgaaaatcaacaattataacttgaaacaaa 44820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 6656299 - 6656231
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||| |||| ||||||||||||  |   |||||| || ||||||||||||||||    
T  6656299 taacaaacataggtatatatattcatatcattttatttccaaaaatcaacaaatataacttgaaacaaa 6656231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 26008278 - 26008396
Alignment:
Q  142 aaacttacaattattacattcgatagccttaacaacctcttgaaatgctgaaacactacatggaactaccaagccattcttctgttcaaacccaaattca 241  Q
    |||||| | ||| |||||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| ||||| |||    
T  26008278 aaacttgccattgttacattcaatagcatttacaacctcttgaaatgttgaaacactacatggaactaccaagccattcctctgctcaaatccaaactca 26008377  T
Q  242 ttgtatgctttctccaaca 260  Q
    |||||||  ||||||||||    
T  26008378 ttgtatgacttctccaaca 26008396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 2430492 - 2430561
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  2430492 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 2430561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 3572641 - 3572572
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  3572641 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 3572572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 36361778 - 36361847
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  36361778 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 36361847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 1597418 - 1597349
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  1597418 gtaacaaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaa 1597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 2632848 - 2632917
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  2632848 gtaacaaacataggcatatacattcctattattttattcccgggaatcaacaattataacttgaaacaaa 2632917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 6978766 - 6978835
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  6978766 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 6978835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 9115833 - 9115902
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  9115833 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 9115902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25789759 - 25789828
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  25789759 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 25789828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 39930453 - 39930522
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  39930453 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 39930522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 46666704 - 46666773
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  46666704 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 46666773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 6911489 - 6911558
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||    
T  6911489 gtaacaaacataggcatatacattcttatcattttattcccgagaatcaacaattataacttgaaacaaa 6911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 9831946 - 9831877
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  9831946 gtaacaaacataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaa 9831877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 14788719 - 14788788
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  14788719 gtaacaaacatagacatatacattcctattattttattcccgggaatcaaaaattataacttgaaacaaa 14788788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 20260162 - 20260093
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||    
T  20260162 gtaacaaacataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaa 20260093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 38964755 - 38964686
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  38964755 gtaacaaacataagcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 38964686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 39329604 - 39329673
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  39329604 gtaacaaacatagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 39329673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 47037453 - 47037522
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  47037453 gtaacaaacataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 47037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 49822993 - 49822924
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||    
T  49822993 gtaacaaacataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaa 49822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 52630769 - 52630838
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  52630769 gtaacaaacatagacatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaa 52630838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 8332012 - 8332079
Alignment:
Q  18 aacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  8332012 aacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaa 8332079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 4683450 - 4683381
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||| |||||||| ||||||||||    
T  4683450 gtaacaaacataggcatatacattcctatcattttatttctgggaatcaacaattataaattgaaacaaa 4683381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 12190253 - 12190184
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||| ||||||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  12190253 gtaacaaacataggcatgtacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaa 12190184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 32824918 - 32824987
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||| ||||||||  ||| |||||| |||||||||||||||||||    
T  32824918 gtaacaaacataggcatatacattcctattattttatttccggaaatcaacaattataacttgaaacaaa 32824987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 48916098 - 48916033
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaa 81  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||||    
T  48916098 gtaacaaacataggcatatacatttctatcattttattctctggaatcaacaaatataacttgaaa 48916033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 51445156 - 51445087
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| |||||||||  ||||||||||||| |||||||||| |||||||||||||||||||    
T  51445156 gtaacaaacataggtatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaa 51445087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 5806361 - 5806298
Alignment:
Q  22 aacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  5806361 aacaaaggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 5806298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 37436697 - 37436630
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaaca 83  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||| |||||||    
T  37436697 gtaacaaacatatgcatatacattcctatcattttattctcgtgaatcaacaaatataacatgaaaca 37436630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 1007743 - 1007812
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| ||| |||||| |||| |||||||||||||||||||||||| || ||||||||||||||||    
T  1007743 gtaacaaacctagacatatatattcatatcattttattctcgggaatcaacaaatataacttgaaacaaa 1007812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 5518580 - 5518511
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| ||| ||||||||||||||  ||||||||| || ||||||||||||||||    
T  5518580 gtaacaaacataggcatatatatttctatcattttattcctgggaatcaacaaatataacttgaaacaaa 5518511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 35187452 - 35187517
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaa 81  Q
    ||||||||||||  |||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  35187452 gtaacaaacataaacatatacatttctatcattttattcccgggaatcaacaattataacttgaaa 35187517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 32202394 - 32202338
Alignment:
Q  29 gcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  32202394 gcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaa 32202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 29091662 - 29091731
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||| |||  |||||||||||| || |||||||| || ||||||||||||||||    
T  29091662 gtaacaaacatagacatatatatttttatcattttattatcaggaatcaacaaatataacttgaaacaaa 29091731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 31806832 - 31806763
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| |||| || ||| |||||||||||||||| |||||| | || ||||||||||||||||    
T  31806832 gtaacaaacataagcatgtatatttctatcattttattctcaggaatctacaaatataacttgaaacaaa 31806763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 50190841 - 50190772
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| |||||||||||||||||| |||||||||  ||| ||| || ||||||| |||||||||||    
T  50190841 gtaacaaacgtaggcatatacattcctagcattttatttccggaaattaacaattatatcttgaaacaaa 50190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 13653847 - 13653916
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| ||  |||||| ||| |||||||||||||||| |||||||| || | ||||||||||||||    
T  13653847 gtaacaaacgtatacatatatatttctatcattttattctcaggaatcaacaaatttaacttgaaacaaa 13653916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 30241005 - 30241074
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| ||| |||||||||||||  |   |||||| || ||||||||||||||||    
T  30241005 gtaacaaacataggcatatatatttctatcattttattaccaaaaatcaacaaatataacttgaaacaaa 30241074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 52699542 - 52699473
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||| |  |||||||||||||||||| | |||||| |  | ||||||||||||||||    
T  52699542 gtaacaaacataggcatgtgtattcctatcattttattcccaggaatctacgaatataacttgaaacaaa 52699473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 11014517 - 11014448
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||| || ||| |||||||||||||| | |||||| | |  ||||||||||||||||    
T  11014517 gtaacaaacatagacatgtatatttctatcattttattcccaggaatctacatatataacttgaaacaaa 11014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 37261843 - 37261912
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| |||| || ||| |||| ||||||||||| |||||| || | ||||| ||||||||||    
T  37261843 gtaacaaacatatgcatgtatatttctataattttattctcaggaatctatgaatataatttgaaacaaa 37261912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 52186122 - 52186053
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||| |||| |||||| ||| ||||||||||||| |  | |||||| || ||||||||||||||||    
T  52186122 gtaacaaatatagacatatatatttctatcattttattataagaaatcaacaaatataacttgaaacaaa 52186053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 6231577 - 6231508
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6231577 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaa 6231508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 24574570 - 24574639
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24574570 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 24574639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 26849017 - 26849086
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  26849017 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 26849086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 40908260 - 40908329
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  40908260 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 40908329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 11239196 - 11239127
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  11239196 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 11239127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 33217989 - 33217920
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  33217989 gtaacaaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaa 33217920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 44952303 - 44952372
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  44952303 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 44952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 28124511 - 28124443
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  28124511 taacaaacataggcatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaa 28124443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 8476384 - 8476315
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  8476384 gtaacaaacacaggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 8476315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 9320524 - 9320455
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9320524 gtaacaaacataagtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 9320455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 20297788 - 20297857
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  20297788 gtaacaaacataggcatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaa 20297857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 31435999 - 31435930
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||||||||||||    
T  31435999 gtaacaaacataggcatatacatttctatcattttattctcaggaatcaacaaatataacttgaaacaaa 31435930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 47114933 - 47114864
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||    
T  47114933 gtaacaaacataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaa 47114864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 1099193 - 1099262
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||    
T  1099193 gtaacaaacatagggatatacatttctatcattttattcccgggaatcaacaattataacttaaaacaaa 1099262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 43132233 - 43132164
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||    
T  43132233 gtaacaaacataggcatatatattcctattattttattctcgagaatcaacaaatataacttgaaacaaa 43132164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 48339833 - 48339764
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| |||||| |||||||||||||||||||    
T  48339833 gtaacaaacataggcatatacatttatatcattttattcccggaaatcaacaattataacttgaaacaaa 48339764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 20414540 - 20414472
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||| |||||||||||| | | |||||| |||||||||||||||||||    
T  20414540 taacaaacataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaa 20414472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 43715370 - 43715315
Alignment:
Q  30 catatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  43715370 catatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaa 43715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 31611061 - 31611004
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattata 73  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||||| |||||||    
T  31611061 gtaacaaacatagacatatacattccaatcattttattcccgggaatcaacaattata 31611004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 53165801 - 53165733
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaa 84  Q
    |||||||||||| ||||||| |||||||||||||||||   ||||||||| || |||||||||||||||    
T  53165801 gtaacaaacataagcatatatattcctatcattttatttatgggaatcaacaaatataacttgaaacaa 53165733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 46359947 - 46359985
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattc 54  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  46359947 gtaacaaacataggtatatacattcctatcattttattc 46359985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 10822794 - 10822733
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataactt 77  Q
    ||||||||||||| |||||||| | |||||||||||||| ||| |||||| || ||||||||    
T  10822794 gtaacaaacatagacatatacacttctatcattttattcccggaaatcaacaaatataactt 10822733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 26849231 - 26849165
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||| ||| ||||||||||||| |||| ||||   || ||||||||||||||||    
T  26849231 gtaacaaacatagacatatatatttctatcattttattatcggtaatc---aaatataacttgaaacaaa 26849165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 28693501 - 28693433
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||| ||||| | |||  |||  ||||||||||||||||| || | ||||||||||||||||    
T  28693501 taacaaacataagcatacatatttttatttttttattctcgggaatctatgaatataacttgaaacaaa 28693433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 6171786 - 6171855
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6171786 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaa 6171855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 346421 - 346352
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  346421 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 346352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 2050861 - 2050930
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2050861 gtaacaaacataggtatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaa 2050930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 39995207 - 39995138
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  39995207 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 39995138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 2521670 - 2521739
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  2521670 gtaacaaacataggcatatacattccaatcattttattttcgggaatcaacaattataacttgaaacaaa 2521739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 4559554 - 4559623
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  4559554 gtaacaaacataggcatatacattccaatcattttattcttgggaatcaacaattataacttgaaacaaa 4559623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 5770186 - 5770117
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  5770186 gtaacaaacataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaa 5770117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 9733922 - 9733853
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  9733922 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 9733853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 11071600 - 11071669
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  11071600 gtaacaaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaa 11071669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 21737476 - 21737407
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21737476 gtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 21737407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 42674737 - 42674668
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  42674737 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 42674668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 14777574 - 14777505
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||    
T  14777574 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataaattgaaacaaa 14777505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 17965978 - 17966047
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  17965978 gtaacaaacatagacatatacattccaatcattttattatcgggaatcaacaattataacttgaaacaaa 17966047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 28311773 - 28311704
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||||||||||    
T  28311773 gtaacaaacataggcatatatattcctatcattttattcccgggaatcaacaaatataacttgaaacaaa 28311704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 37192517 - 37192586
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  37192517 gtaacaaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 37192586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 37533947 - 37534016
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  37533947 gtaacaaacatagacatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaa 37534016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 41729206 - 41729137
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  41729206 gtaacaaacataggcatatccattcctatcattttattcccgggaataaaaaattataacttgaaacaaa 41729137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 638588 - 638657
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||    
T  638588 gtaacaaacatagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaa 638657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 20426559 - 20426490
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||| ||||||||||    
T  20426559 gtaacaaacataggcatataaattcctatcattttattcccgggaatcaacaaatataatttgaaacaaa 20426490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 34356772 - 34356707
Alignment:
Q  20 caaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  34356772 caaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 34356707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 37233424 - 37233493
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||||| || ||||||||||||||||    
T  37233424 gtaacaaacataggcatatatgttcctatcattttattcccgggaatcaacaaatataacttgaaacaaa 37233493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 41750524 - 41750593
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| ||||||||||||||   |||||||| |||||||||||||||||||    
T  41750524 gtaacaaacataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaa 41750593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 45409245 - 45409314
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||    
T  45409245 gtaaaaaacataggcatatacattcctatcattttatacttgggaatcaacaaatataacttgaaacaaa 45409314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 40950935 - 40950866
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| ||||||| ||| |||||||||||||| || ||||||| |||||||||||||||||||    
T  40950935 gtaacaaacataagcatatatatttctatcattttattcccgagaatcaacaattataacttgaaacaaa 40950866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 13760941 - 13761009
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| | ||| |||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  13760941 taacaaacataggtacatatattcctatcattttattcccgaaaatcaataattataacttgaaacaaa 13761009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 6571682 - 6571751
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| |||||||||||||||||  ||| |||||| || |||||||| |||||||    
T  6571682 gtaacaaacataggcatatatattcctatcattttatttccggaaatcaacaaatataactttaaacaaa 6571751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 27358039 - 27357970
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||| ||||||||||||| |  ||||||||| || ||||||||||||||||    
T  27358039 gtaacaaacatagacatatacatccctatcattttatacctgggaatcaacaaatataacttgaaacaaa 27357970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 14832806 - 14832874
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||| ||| ||||||||||||||   |||||||| || ||||||||||||||||    
T  14832806 taacaaacataggcatatatatttctatcattttattcctaggaatcaacaaatataacttgaaacaaa 14832874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 26310273 - 26310333
Alignment:
Q  25 ataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||| |||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||    
T  26310273 atagacatatacatttctatcattttattcccgggaatcaacaattataactttaaacaaa 26310333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 1988306 - 1988375
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||| || ||| |||||||||||||| | | |||||| || |||||||| |||||||    
T  1988306 gtaacaaacataggcatgtatatttctatcattttattcccagaaatcaacaaatataacttcaaacaaa 1988375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 14253517 - 14253578
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataactt 77  Q
    ||||||||||||| |||||| ||| |||||||||||||| || ||||||| || ||||||||    
T  14253517 gtaacaaacatagacatatatatttctatcattttattcccgagaatcaacaaatataactt 14253578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 18713733 - 18713664
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| |||  ||||||||||||  |  ||||||| || ||||||||||||||||    
T  18713733 gtaacaaacataggcatatatatttatatcattttattaccatgaatcaacaaatataacttgaaacaaa 18713664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 3902451 - 3902520
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| |  |||| ||| |||||||||||||||| ||||  || || ||||||||||||||||    
T  3902451 gtaacaaacatatgtctatatatttctatcattttattctcaggaaagaacaaatataacttgaaacaaa 3902520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25455019 - 25455088
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||  |||  ||| ||||||||||| |||||| | || ||||||||||||||||    
T  25455019 gtaacaaacatagacatatgtatttttatgattttattctcaggaatctacaaatataacttgaaacaaa 25455088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 40570015 - 40570084
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||| ||  ||  ||| ||||||||| | |||||| | |||||||||||||||||||    
T  40570015 gtaacaaacataggcatgtatgtttttatgattttattcccaggaatctacaattataacttgaaacaaa 40570084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 11763446 - 11763382
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaa 81  Q
    |||||||||||| |||||| ||||||||||||| |||| ||  || ||| || ||||||||||||    
T  11763446 taacaaacatagacatatatattcctatcatttcattcccgaaaaacaacaaatataacttgaaa 11763382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 201920 - 201989
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  201920 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 201989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 143608 - 143677
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| ||  |||||| ||| |||||||||||||||| |||||||| || | ||||||||||||||    
T  143608 gtaacaaacgtatacatatatatttctatcattttattctcaggaatcaacaaatttaacttgaaacaaa 143677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 3050004 - 3050073
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  3050004 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 3050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 18726695 - 18726626
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  18726695 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 18726626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 37392622 - 37392553
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  37392622 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 37392553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 1554430 - 1554361
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  1554430 gtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 1554361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 12710640 - 12710709
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  12710640 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 12710709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25837906 - 25837975
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25837906 gtaacaaacataggcatgtacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 25837975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 26602014 - 26601945
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  26602014 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataatttgaaacaaa 26601945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 32661009 - 32660940
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  32661009 gtaacaaacataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaa 32660940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 35818500 - 35818431
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  35818500 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 35818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 38364076 - 38364145
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  38364076 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 38364145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10896293 - 10896224
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||    
T  10896293 gtaacaaacataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaa 10896224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 16313583 - 16313514
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  16313583 gtaacaaacataggtatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaa 16313514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 18298107 - 18298176
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  18298107 gtaacaaacataggtatatacattcctatcattttattcccgagaatcaaaaattataacttgaaacaaa 18298176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 26062139 - 26062208
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| ||||||||| |||||||||||||| || ||||||| |||||||||||||||||||    
T  26062139 gtaacaaacataggaatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaa 26062208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 38132813 - 38132744
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||| |||||||||||||| || ||||||| |||||||||||||||||||    
T  38132813 gtaacaaacatagacatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaa 38132744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 41228790 - 41228721
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||| || |||||||||||||||||||    
T  41228790 gtaacaaacgtaggcatatacattcctaccattttattcccgggaattaacaattataacttgaaacaaa 41228721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 42755862 - 42755931
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||| |||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||||||    
T  42755862 gtaactaacataggcatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaa 42755931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 35394385 - 35394454
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||| ||| || |||||||||||||| |||||||||| ||||||||||||||||    
T  35394385 gtaacaaacatagacatatatatttctttcattttattctcgtgaatcaataaatataacttgaaacaaa 35394454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 7931235 - 7931303
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||  |||||||||| |||||||||||||| | |||||||| |||||||||||||||||||    
T  7931235 taacaaacatatacatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaa 7931303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 40197151 - 40197083
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||  |||||||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  40197151 taacaaacataaacatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaa 40197083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 7317368 - 7317437
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| ||||||||||||||||| | |  |||||| || ||||||||||||||||    
T  7317368 gtaacaaacataggcatatatattcctatcattttatttttgaaaatcaacaaatataacttgaaacaaa 7317437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 21137208 - 21137139
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| ||| |||| ||||||||||| |||||||| || |||||||| |||||||    
T  21137208 gtaacaaacataggcatatatatttctattattttattctcaggaatcaacaaatataacttcaaacaaa 21137139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 33444702 - 33444633
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||| |||  ||||||||||||||| |||||||| || ||||||||||||||||    
T  33444702 gtaacaaacatagacatatatatttttatcattttattctcaggaatcaacaaatataacttgaaacaaa 33444633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 29421565 - 29421496
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||  |||||| ||| ||||||||||||||||  ||||||| || ||||| ||||||||||    
T  29421565 gtaacaaacataaacatatatatttctatcattttattctcatgaatcaacaaatataatttgaaacaaa 29421496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 7053646 - 7053577
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  7053646 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 7053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 1317013 - 1317082
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  1317013 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 1317082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 2657695 - 2657764
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  2657695 gtaacaaacataggtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 2657764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 8029328 - 8029397
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  8029328 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 8029397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 14171008 - 14171077
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14171008 gtaacaaacataggcatatagattcctatcattttattcccgggaatcaaaaattataacttgaaacaaa 14171077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 16968920 - 16968989
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  16968920 gtaacaaacatagacatatagattcctatcattttattctcaggaatcaacaattataacttgaaacaaa 16968989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 18897916 - 18897985
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||||||||||||||||    
T  18897916 gtaacaaacataggcatatacatttctatcactttatttccgggaatcaacaattataacttgaaacaaa 18897985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 7344159 - 7344093
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaac 82  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||  | |||||||| |||||||    
T  7344159 gtaacaaatataggcatatacattcctatcattttattctcggaaatttacaattataatttgaaac 7344093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 6705841 - 6705772
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||| ||| ||| ||||||||||    ||||||| || ||||||||||||||||    
T  6705841 gtaacaaacatagacatatatatttctaccattttattccaatgaatcaacaaatataacttgaaacaaa 6705772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 4765636 - 4765567
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4765636 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 4765567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 11855731 - 11855662
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  11855731 gtaacaaacataggcatatacattcctatcattttattctcaggaatcaacaattataacttgaaacaaa 11855662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 12970606 - 12970537
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12970606 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 12970537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 18412204 - 18412273
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  18412204 gtaacaaacataggcatatacattcctatcattttattcccaggaatcaataattataacttgaaacaaa 18412273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 19065581 - 19065512
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  19065581 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 19065512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 22935988 - 22935919
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  22935988 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 22935919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 28602550 - 28602619
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  28602550 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 28602619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 555782 - 555713
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  555782 gtaacaaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 555713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 6091710 - 6091779
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||    
T  6091710 gtaacaaacataggcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaa 6091779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 14206897 - 14206828
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||||||    
T  14206897 gtaacaaacataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaacaaa 14206828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 8406889 - 8406958
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||| |||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||||||    
T  8406889 gtaacaaatataggcatgtacattcctatcattttattctcgaaaatcaacaattataacttgaaacaaa 8406958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 29543091 - 29543022
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||||| |||||||||||| | |||||||| |||||||||||||||||||    
T  29543091 gtaacaaacatagacatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaa 29543022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 27481352 - 27481421
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||  |   |||||| |||||||||||||||||||    
T  27481352 gtaacaaacataggcatatacattcctatcattttatttccaaaaatcaaaaattataacttgaaacaaa 27481421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 36703869 - 36703938
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||||||| |||||||||||||| ||  |||||| |||||||||||||||||||    
T  36703869 gtaacaaacatagacatatacatttctatcattttattcccgataatcaacaattataacttgaaacaaa 36703938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 8646467 - 8646412
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataatta 71  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  8646467 gtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaatta 8646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 32535932 - 32536001
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||  |||||||||| ||||||||||||||  ||||||||| ||||||||||| |||||||    
T  32535932 gtaacaaacataaacatatacatttctatcattttattcctgggaatcaacaattataacttaaaacaaa 32536001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 27481004 - 27481074
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaaa 86  Q
    ||||||||||||| |||| | ||||||||||||||||||||   |||||| || |||||||||||| ||||    
T  27481004 gtaacaaacatagacatacatattcctatcattttattctcaaaaatcaacaaatataacttgaaataaaa 27481074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 6930654 - 6930704
Alignment:
Q  31 atatacattcctatcattttattctcgggaatcaataattataacttgaaa 81  Q
    ||||| ||| |||||||||||||||| |||||||| || ||||||||||||    
T  6930654 atatatatttctatcattttattctcaggaatcaacaaatataacttgaaa 6930704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 42012255 - 42012186
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| |||||  ||| |||||||||||||| || ||||||| || |||| ||| |||||||    
T  42012255 gtaacaaacatagacatatgtatttctatcattttattcccgagaatcaacaaatatagcttcaaacaaa 42012186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 15200621 - 15200553
Alignment:
Q  17 taacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| |||||| |||  |||||||||||| ||   |||| |||| ||||||||||||||||    
T  15200621 taacaaacatagacatatatatttatatcattttattttcaaaaatctataaatataacttgaaacaaa 15200553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 45747872 - 45747803
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  45747872 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaa 45747803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 48518967 - 48518898
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  48518967 gtaacaaacataggcatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaa 48518898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 18405310 - 18405241
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  18405310 gtaacaaacataggcatatacatttctataattttattctcgggaatcaacaattataacttgaaacaaa 18405241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 27762975 - 27762906
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  27762975 gtaacaaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 27762906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 39730369 - 39730300
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  39730369 gtaacaaacatagacatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaa 39730300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 40435899 - 40435968
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  40435899 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 40435968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 43723263 - 43723332
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  43723263 gtaacaaacataggcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaa 43723332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 48879324 - 48879393
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  48879324 gtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 48879393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 936125 - 936194
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  936125 gtaacaaacatagggatatatattccaatcattttattctcgggaatcaacaattataacttgaaacaaa 936194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 6279997 - 6279928
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  6279997 gtaacaaacatagacatatacattcatatcattttattcccgggaatcaacaattataacttgaaacaaa 6279928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 13230065 - 13229996
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||||    
T  13230065 gtaacaaacataggcatatacatttctatcattttattcccgggaataaaaaattataacttgaaacaaa 13229996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 23686786 - 23686855
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  23686786 gtaacaaacataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 23686855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 27555409 - 27555478
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  27555409 gtaacaaacatagacatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaa 27555478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 34049673 - 34049604
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  34049673 gtaacaaacatagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaa 34049604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 35999685 - 35999754
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||    
T  35999685 gtaacaaacataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaa 35999754  T

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Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 41859123 - 41859054
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  41859123 gtaacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaa 41859054  T

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Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 25916109 - 25916042
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25916109 gtaacaaacataggcata--cattcctatcattttattcccgggaatcaaaaattataacttgaaacaaa 25916042  T

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Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 25932440 - 25932509
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| ||||||||||||||   |||||||| |||||||||||||||||||    
T  25932440 gtaacaaacataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaa 25932509  T

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Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 39835383 - 39835314
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||| |||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||    
T  39835383 gtaacaaacatatgcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaa 39835314  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 41744296 - 41744231
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaa 81  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||||||    
T  41744296 gtaacaaacataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaa 41744231  T

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Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 42773947 - 42774016
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||||| |||||||||||| | | |||||| |||||||||||||||||||    
T  42773947 gtaacaaacataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaa 42774016  T

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Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 45596267 - 45596336
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||| ||  |||||| |||||||||||||||||||    
T  45596267 gtaacaaacataggcatatacatttctatcattttattcccgaaaatcaacaattataacttgaaacaaa 45596336  T

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Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 47670361 - 47670430
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||||||||||||||||| |||||||||||||  | |||||||| |||||||||||||||||||    
T  47670361 gtaacaaacataggcatatacatttctatcattttatttccaggaatcaacaattataacttgaaacaaa 47670430  T

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Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 55968076 - 55968007
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||| || |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  55968076 gtaacaaacagagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaa 55968007  T

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Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 27942747 - 27942811
Alignment:
Q  21 aaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  27942747 aaacatagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaa 27942811  T

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Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 18931756 - 18931821
Alignment:
Q  20 caaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||| ||||||||||||||||||||||||| | | |||||| |||||||||||||||||||    
T  18931756 caaacatagacatatacattcctatcattttattcccagaaatcaacaattataacttgaaacaaa 18931821  T

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Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 30415901 - 30415970
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||||| || |||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||    
T  30415901 gtaacaaacacagacatatatattcctatcattttattatcgggaatcaacaaatataacttgaaacaaa 30415970  T

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Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 32953522 - 32953591
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||| |||||||||||||||||||||||||| |||  ||||||||| ||||||||||||| |||||    
T  32953522 gtaacaaagataggcatatacattcctatcattttgttcctgggaatcaacaattataacttgagacaaa 32953591  T

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Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 39498824 - 39498893
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||  |||||||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  39498824 gtaacaaacataaacatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaa 39498893  T

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Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 39502163 - 39502232
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||  |||||||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  39502163 gtaacaaacataaacatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaa 39502232  T

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Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8322244 - 8322308
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaa 80  Q
    ||||||||||||| |||||||||| |||||||||||||| | |||||||| ||||||||||||||    
T  8322244 gtaacaaacatagacatatacatttctatcattttattcccaggaatcaacaattataacttgaa 8322308  T

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Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 34237480 - 34237427
Alignment:
Q  32 tatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  34237480 tatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaa 34237427  T

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Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 50672981 - 50672927
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataatta 71  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||    
T  50672981 gtaacaaacatagacatatacattcctatcattttattc-ccggaatcaacaatta 50672927  T

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Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10400881 - 10400812
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    |||| |||||||| |||||||||| |||||||||||||| |   |||||| || ||||||||||||||||    
T  10400881 gtaataaacatagacatatacatttctatcattttattcccaaaaatcaacaaatataacttgaaacaaa 10400812  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 9327319 - 9327251
Alignment:
Q  18 aacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaaa 86  Q
    ||||||||||| |||||| ||| ||| ||||||||| |  |||||||| || |||||||||||| ||||    
T  9327319 aacaaacatagacatatatatttctaacattttatttttaggaatcaacaaatataacttgaaataaaa 9327251  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 9374078 - 9374010
Alignment:
Q  18 aacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaaa 86  Q
    ||||||||||| |||||| ||| ||| ||||||||| |  |||||||| || |||||||||||| ||||    
T  9374078 aacaaacatagacatatatatttctaacattttatttttaggaatcaacaaatataacttgaaataaaa 9374010  T

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Target: scaffold0189 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 29028 - 28959
Alignment:
Q  16 gtaacaaacataggcatatacattcctatcattttattctcgggaatcaataattataacttgaaacaaa 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  29028 gtaacaaacataggcatatacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaa 28959  T

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