View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9858_high_21 (Length: 239)
Name: NF9858_high_21
Description: NF9858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9858_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 34387895 - 34387672
Alignment:
| Q |
1 |
tggatttgaaagggtgatggaacaactttctcatgttgaagctaatcgtagtggaaacgagggacataatcaacaacatttaccggcattaaaatccgcg |
100 |
Q |
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| T |
34387895 |
tggatttgaaagggtgatggaacaactttctcatgttgaagctaatcgtagtggaaacgagggacataatcaacaacatttaccggcattaaaatccgcg |
34387796 |
T |
|
| Q |
101 |
gtggaattgttaccgacgattgaaatcaacgagagtcatatgaatgtagaatcacattgtgccgtttgtaaagagccttttgaacttggaatttcagcta |
200 |
Q |
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| T |
34387795 |
gtggaattgttaccgacgattgaaatcaacgagagtcatatgaatgtagaatcacattgtgccgtttgtaaagagccttttgaacttggaatttcagcta |
34387696 |
T |
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| Q |
201 |
gtgaaatgccatgcaaacacatat |
224 |
Q |
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| T |
34387695 |
gggaaatgccatgcaaacacatat |
34387672 |
T |
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