View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9858_low_36 (Length: 240)

Name: NF9858_low_36
Description: NF9858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9858_low_36
NF9858_low_36
[»] chr8 (48 HSPs)
chr8 (1-224)||(468347-468570)
chr8 (170-224)||(475060-475114)
chr8 (112-166)||(29851155-29851209)
chr8 (123-163)||(28849175-28849215)
chr8 (112-166)||(5062135-5062189)
chr8 (113-163)||(11587771-11587821)
chr8 (112-166)||(14762557-14762611)
chr8 (113-163)||(41540992-41541042)
chr8 (125-166)||(1214794-1214835)
chr8 (134-166)||(6899914-6899946)
chr8 (123-163)||(7884311-7884351)
chr8 (123-163)||(16861771-16861811)
chr8 (107-163)||(17524579-17524635)
chr8 (123-163)||(28868940-28868980)
chr8 (123-163)||(31692952-31692992)
chr8 (123-163)||(38194489-38194529)
chr8 (108-163)||(43536815-43536870)
chr8 (113-163)||(4174754-4174804)
chr8 (125-163)||(14584637-14584675)
chr8 (125-163)||(16736457-16736495)
chr8 (113-163)||(18526551-18526601)
chr8 (132-166)||(33299473-33299507)
chr8 (125-163)||(40325347-40325385)
chr8 (112-166)||(44012426-44012480)
chr8 (113-166)||(3562290-3562343)
chr8 (133-166)||(23550867-23550900)
chr8 (101-166)||(28481841-28481906)
chr8 (123-163)||(899385-899425)
chr8 (123-163)||(1366965-1367005)
chr8 (123-163)||(2098991-2099031)
chr8 (99-159)||(3360406-3360466)
chr8 (123-163)||(12113368-12113408)
chr8 (123-163)||(15226059-15226099)
chr8 (123-163)||(16872382-16872422)
chr8 (123-163)||(23681740-23681780)
chr8 (123-163)||(26513907-26513947)
chr8 (134-166)||(29441080-29441112)
chr8 (123-163)||(33012282-33012322)
chr8 (123-163)||(34141440-34141480)
chr8 (134-166)||(36466794-36466826)
chr8 (123-163)||(37163556-37163596)
chr8 (123-163)||(37954192-37954232)
chr8 (123-163)||(38045133-38045173)
chr8 (123-163)||(38896481-38896521)
chr8 (123-163)||(39284415-39284455)
chr8 (123-163)||(41256223-41256263)
chr8 (123-163)||(44023428-44023468)
chr8 (123-163)||(45187131-45187171)
[»] chr7 (52 HSPs)
chr7 (99-166)||(27689092-27689159)
chr7 (113-163)||(4503641-4503691)
chr7 (125-163)||(24161853-24161891)
chr7 (113-163)||(26941194-26941244)
chr7 (113-163)||(40353646-40353696)
chr7 (125-166)||(17833129-17833170)
chr7 (113-166)||(46342951-46343004)
chr7 (123-163)||(3264562-3264602)
chr7 (123-163)||(7979212-7979252)
chr7 (123-163)||(23709778-23709818)
chr7 (114-166)||(23824719-23824771)
chr7 (134-166)||(27131351-27131383)
chr7 (123-163)||(28703762-28703802)
chr7 (123-163)||(31466267-31466307)
chr7 (123-163)||(39430300-39430340)
chr7 (123-163)||(40704607-40704647)
chr7 (123-163)||(42941108-42941148)
chr7 (123-163)||(43576956-43576996)
chr7 (112-167)||(5113874-5113929)
chr7 (123-166)||(31582002-31582045)
chr7 (113-164)||(32778024-32778075)
chr7 (124-163)||(48339665-48339704)
chr7 (124-166)||(14054098-14054140)
chr7 (124-166)||(14364126-14364168)
chr7 (112-166)||(21553577-21553631)
chr7 (113-163)||(45822972-45823022)
chr7 (137-166)||(553989-554018)
chr7 (133-166)||(9417635-9417668)
chr7 (133-166)||(19293262-19293295)
chr7 (125-166)||(45042190-45042231)
chr7 (134-166)||(8251862-8251894)
chr7 (123-163)||(12263869-12263909)
chr7 (123-163)||(17611327-17611367)
chr7 (123-163)||(21177430-21177470)
chr7 (123-163)||(25428399-25428439)
chr7 (123-163)||(25547733-25547773)
chr7 (123-163)||(27059565-27059605)
chr7 (123-163)||(27116435-27116475)
chr7 (123-163)||(29669491-29669531)
chr7 (135-163)||(32466191-32466219)
chr7 (135-163)||(32468026-32468054)
chr7 (123-163)||(32827126-32827166)
chr7 (123-163)||(33616597-33616637)
chr7 (123-163)||(35144109-35144149)
chr7 (123-163)||(36916885-36916925)
chr7 (123-163)||(37277903-37277943)
chr7 (123-163)||(38589644-38589684)
chr7 (123-163)||(39960902-39960942)
chr7 (123-163)||(40536807-40536847)
chr7 (123-163)||(43884148-43884188)
chr7 (123-163)||(46774328-46774368)
chr7 (123-163)||(47604503-47604543)
[»] chr1 (40 HSPs)
chr1 (108-166)||(3280868-3280926)
chr1 (123-163)||(6540486-6540526)
chr1 (123-166)||(26551494-26551537)
chr1 (112-166)||(13352667-13352721)
chr1 (112-166)||(25792363-25792417)
chr1 (133-166)||(5466927-5466960)
chr1 (123-166)||(2458704-2458747)
chr1 (123-166)||(10085927-10085970)
chr1 (108-166)||(487674-487732)
chr1 (133-163)||(35369424-35369454)
chr1 (113-163)||(41457716-41457766)
chr1 (112-166)||(52551517-52551571)
chr1 (126-163)||(290280-290317)
chr1 (133-166)||(6597056-6597089)
chr1 (133-166)||(17179299-17179332)
chr1 (113-150)||(30093657-30093694)
chr1 (133-166)||(31181391-31181424)
chr1 (133-166)||(39739591-39739624)
chr1 (126-163)||(41620804-41620841)
chr1 (123-163)||(8330359-8330399)
chr1 (123-163)||(8768471-8768511)
chr1 (123-163)||(15574886-15574926)
chr1 (123-163)||(16011384-16011424)
chr1 (123-163)||(16436275-16436315)
chr1 (123-163)||(19010994-19011034)
chr1 (123-163)||(23549226-23549266)
chr1 (123-163)||(28121473-28121513)
chr1 (123-163)||(29095466-29095506)
chr1 (123-163)||(33487924-33487964)
chr1 (123-163)||(35379536-35379576)
chr1 (123-163)||(39282751-39282791)
chr1 (123-163)||(39673520-39673560)
chr1 (123-163)||(40403719-40403759)
chr1 (123-163)||(42219609-42219649)
chr1 (123-163)||(45268995-45269035)
chr1 (123-163)||(46436304-46436344)
chr1 (126-166)||(49367264-49367304)
chr1 (123-163)||(50309728-50309768)
chr1 (123-163)||(52701811-52701851)
chr1 (123-163)||(52833818-52833858)
[»] scaffold0024 (1 HSPs)
scaffold0024 (105-166)||(42752-42813)
[»] chr5 (38 HSPs)
chr5 (123-163)||(39933029-39933069)
chr5 (123-163)||(21582540-21582580)
chr5 (113-163)||(9246244-9246294)
chr5 (133-166)||(24806970-24807003)
chr5 (122-166)||(33676-33720)
chr5 (123-163)||(9577496-9577536)
chr5 (123-163)||(14341962-14342002)
chr5 (123-163)||(18094503-18094543)
chr5 (123-163)||(18652423-18652463)
chr5 (123-163)||(29665533-29665573)
chr5 (123-163)||(32292672-32292712)
chr5 (123-166)||(36487499-36487542)
chr5 (113-163)||(34381834-34381884)
chr5 (133-163)||(39990235-39990265)
chr5 (113-166)||(26091714-26091767)
chr5 (113-162)||(28118911-28118960)
chr5 (113-166)||(31196066-31196119)
chr5 (133-166)||(40047545-40047578)
chr5 (123-163)||(2914642-2914682)
chr5 (123-163)||(3634142-3634182)
chr5 (123-163)||(4431731-4431771)
chr5 (123-163)||(6335161-6335201)
chr5 (123-163)||(7458795-7458835)
chr5 (123-163)||(9249147-9249187)
chr5 (123-163)||(9641238-9641278)
chr5 (123-163)||(11248138-11248178)
chr5 (123-163)||(14153519-14153559)
chr5 (123-163)||(18025922-18025962)
chr5 (123-163)||(21195059-21195099)
chr5 (123-163)||(22510619-22510659)
chr5 (123-163)||(26256518-26256558)
chr5 (123-163)||(27534836-27534876)
chr5 (123-163)||(32706950-32706990)
chr5 (123-163)||(33629749-33629789)
chr5 (123-163)||(34900023-34900063)
chr5 (123-163)||(35584731-35584771)
chr5 (123-163)||(35870149-35870189)
chr5 (123-163)||(40555288-40555328)
[»] chr2 (46 HSPs)
chr2 (123-163)||(37985742-37985782)
chr2 (109-166)||(31839169-31839226)
chr2 (123-166)||(1684157-1684200)
chr2 (108-163)||(21289070-21289125)
chr2 (123-166)||(22060863-22060906)
chr2 (113-163)||(32068228-32068278)
chr2 (113-166)||(8983629-8983682)
chr2 (113-166)||(9527667-9527720)
chr2 (123-163)||(6026874-6026914)
chr2 (123-163)||(14834211-14834251)
chr2 (123-163)||(29412049-29412089)
chr2 (123-163)||(30549592-30549632)
chr2 (108-160)||(30903789-30903841)
chr2 (123-163)||(31072438-31072478)
chr2 (123-163)||(36598602-36598642)
chr2 (123-163)||(37988522-37988562)
chr2 (108-163)||(4646400-4646455)
chr2 (123-166)||(18449952-18449995)
chr2 (123-166)||(40649267-40649310)
chr2 (125-163)||(2048022-2048060)
chr2 (112-166)||(13196575-13196629)
chr2 (113-163)||(13375530-13375580)
chr2 (113-163)||(19240627-19240677)
chr2 (113-163)||(22050480-22050530)
chr2 (125-163)||(30564009-30564047)
chr2 (113-163)||(32674405-32674455)
chr2 (125-163)||(38993704-38993742)
chr2 (113-163)||(39958173-39958223)
chr2 (113-163)||(43521406-43521456)
chr2 (133-166)||(4979153-4979186)
chr2 (133-166)||(4997062-4997095)
chr2 (123-163)||(4826510-4826550)
chr2 (123-163)||(5748480-5748520)
chr2 (123-163)||(6596685-6596725)
chr2 (123-163)||(9110850-9110890)
chr2 (123-163)||(11216811-11216851)
chr2 (108-160)||(13196877-13196929)
chr2 (123-163)||(14780725-14780765)
chr2 (123-163)||(16198611-16198651)
chr2 (123-163)||(22154035-22154075)
chr2 (123-163)||(22375041-22375081)
chr2 (123-163)||(29432705-29432745)
chr2 (123-163)||(35669905-35669945)
chr2 (123-163)||(36846037-36846077)
chr2 (123-163)||(37111024-37111064)
chr2 (123-163)||(43257295-43257335)
[»] scaffold0010 (1 HSPs)
scaffold0010 (113-166)||(134066-134119)
[»] chr6 (20 HSPs)
chr6 (109-166)||(7596074-7596131)
chr6 (114-166)||(6087017-6087068)
chr6 (123-163)||(10629339-10629379)
chr6 (123-163)||(14310789-14310829)
chr6 (123-163)||(34283562-34283602)
chr6 (123-166)||(12058783-12058826)
chr6 (125-163)||(14600459-14600497)
chr6 (113-163)||(16466174-16466224)
chr6 (113-163)||(24098437-24098487)
chr6 (112-166)||(30239025-30239079)
chr6 (134-163)||(31022420-31022449)
chr6 (123-163)||(2603418-2603458)
chr6 (123-163)||(3819821-3819861)
chr6 (123-163)||(4131071-4131111)
chr6 (123-163)||(6334743-6334783)
chr6 (123-163)||(9461793-9461833)
chr6 (123-163)||(16524540-16524580)
chr6 (123-163)||(17442025-17442065)
chr6 (134-166)||(18023782-18023814)
chr6 (123-163)||(24178446-24178486)
[»] chr4 (48 HSPs)
chr4 (109-166)||(33517537-33517594)
chr4 (123-163)||(22128939-22128979)
chr4 (123-163)||(44570962-44571002)
chr4 (123-166)||(14965553-14965596)
chr4 (113-163)||(30418923-30418973)
chr4 (113-163)||(37788094-37788144)
chr4 (113-163)||(52184074-52184124)
chr4 (133-166)||(3086087-3086120)
chr4 (123-160)||(9542387-9542424)
chr4 (133-166)||(19877969-19878002)
chr4 (133-166)||(26855535-26855568)
chr4 (133-166)||(54315269-54315302)
chr4 (123-163)||(10125503-10125543)
chr4 (123-163)||(30049686-30049726)
chr4 (123-163)||(53690457-53690497)
chr4 (123-166)||(388259-388302)
chr4 (108-163)||(34491690-34491745)
chr4 (113-163)||(7257921-7257971)
chr4 (133-163)||(16605406-16605436)
chr4 (113-163)||(51234724-51234774)
chr4 (133-166)||(6284197-6284230)
chr4 (126-163)||(9036743-9036780)
chr4 (133-166)||(23153871-23153904)
chr4 (133-166)||(32385392-32385425)
chr4 (126-163)||(41414091-41414128)
chr4 (133-166)||(42133590-42133623)
chr4 (123-163)||(288563-288603)
chr4 (123-163)||(6629089-6629129)
chr4 (123-163)||(13800549-13800589)
chr4 (123-163)||(16032509-16032549)
chr4 (123-163)||(22843124-22843164)
chr4 (123-163)||(23138436-23138476)
chr4 (123-163)||(25367266-25367306)
chr4 (123-163)||(30088620-30088660)
chr4 (123-163)||(30609449-30609489)
chr4 (123-163)||(33244791-33244831)
chr4 (123-163)||(34002390-34002430)
chr4 (123-163)||(34246974-34247014)
chr4 (123-163)||(34736138-34736178)
chr4 (123-163)||(37390714-37390754)
chr4 (134-166)||(41947597-41947629)
chr4 (123-163)||(42179482-42179522)
chr4 (123-163)||(43050384-43050424)
chr4 (123-163)||(47170707-47170747)
chr4 (123-163)||(50098390-50098430)
chr4 (123-163)||(52397714-52397754)
chr4 (123-163)||(56235368-56235408)
chr4 (123-163)||(56513477-56513517)
[»] chr3 (42 HSPs)
chr3 (113-166)||(390540-390593)
chr3 (113-166)||(42662471-42662524)
chr3 (123-163)||(8724498-8724538)
chr3 (123-163)||(9076385-9076425)
chr3 (123-163)||(38808306-38808346)
chr3 (114-166)||(44804742-44804794)
chr3 (123-166)||(7673929-7673972)
chr3 (112-166)||(54768982-54769036)
chr3 (107-164)||(4610760-4610817)
chr3 (123-163)||(5136938-5136978)
chr3 (126-166)||(19556838-19556878)
chr3 (123-163)||(29675078-29675118)
chr3 (123-163)||(43185563-43185603)
chr3 (123-163)||(47497927-47497967)
chr3 (123-163)||(51380051-51380091)
chr3 (123-166)||(43190512-43190555)
chr3 (112-166)||(31229551-31229605)
chr3 (112-166)||(39290738-39290792)
chr3 (125-163)||(42938182-42938220)
chr3 (112-165)||(4756525-4756578)
chr3 (133-166)||(20394024-20394057)
chr3 (133-166)||(39144439-39144472)
chr3 (123-163)||(4047101-4047141)
chr3 (123-163)||(6466356-6466396)
chr3 (123-163)||(14781112-14781152)
chr3 (123-163)||(29517236-29517276)
chr3 (123-163)||(30745071-30745111)
chr3 (123-163)||(31289106-31289146)
chr3 (123-163)||(31725841-31725881)
chr3 (123-163)||(34663649-34663689)
chr3 (123-163)||(34816927-34816967)
chr3 (123-163)||(40643535-40643575)
chr3 (123-163)||(41265730-41265770)
chr3 (123-163)||(41980093-41980133)
chr3 (123-163)||(43109811-43109851)
chr3 (123-163)||(43599788-43599828)
chr3 (123-163)||(44048318-44048358)
chr3 (123-163)||(47109085-47109125)
chr3 (123-163)||(48910360-48910400)
chr3 (123-163)||(49609969-49610009)
chr3 (123-163)||(52262443-52262483)
chr3 (123-163)||(52870460-52870500)
[»] scaffold0263 (1 HSPs)
scaffold0263 (112-165)||(14145-14198)
[»] scaffold0187 (2 HSPs)
scaffold0187 (133-166)||(10323-10356)
scaffold0187 (133-166)||(20651-20684)
[»] scaffold0130 (1 HSPs)
scaffold0130 (113-163)||(22890-22940)
[»] scaffold0074 (1 HSPs)
scaffold0074 (125-163)||(17677-17715)
[»] scaffold0009 (1 HSPs)
scaffold0009 (125-163)||(8655-8693)
[»] scaffold0533 (1 HSPs)
scaffold0533 (123-163)||(7426-7466)
[»] scaffold0444 (1 HSPs)
scaffold0444 (123-163)||(7814-7854)
[»] scaffold0262 (1 HSPs)
scaffold0262 (123-163)||(3977-4017)
[»] scaffold0236 (1 HSPs)
scaffold0236 (123-163)||(20490-20530)
[»] scaffold0189 (1 HSPs)
scaffold0189 (123-163)||(13527-13567)
[»] scaffold0011 (2 HSPs)
scaffold0011 (123-163)||(1461-1501)
scaffold0011 (134-166)||(13709-13741)


Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 468347 - 468570
Alignment:
Q  1 tatgtatttactgtttcttcaatttcagatacaagcaatgttatcttgagaaatactaacgtgtaatctcaaagcattgttgttagtacaatgaaaacac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  468347 tatgtatttattgtttcttcaatttcagatacaagcaatgttatcttgagaaatgctaatgtgtaatctcaaagcattgttgttagtacaacgaaaacac 468446  T
Q  101 tctatttgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttttaccaggttccagcttatgcaagtcatcccaatt 200  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  468447 tctatttatcttaaattatacgacgttttgatcatttcatacgtattaaaaaatataattaatttttaccaggttccagcttatgcaagtcatcccaatt 468546  T
Q  201 acttatcactttgtgcatggatgt 224  Q
    ||||||||||||||||||||||||    
T  468547 acttatcactttgtgcatggatgt 468570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 475060 - 475114
Alignment:
Q  170 caggttccagcttatgcaagtcatcccaattacttatcactttgtgcatggatgt 224  Q
    |||||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  475060 caggttccagcttatgcaagtcatcccaattatttatcactttcagcatggatgt 475114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 29851209 - 29851155
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||| |||||  |||||| ||||||||||||||||||||||||||||    
T  29851209 taaattatacaatgttttagtcatttaacacgtattaagaaatataattaatttt 29851155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 28849215 - 28849175
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28849215 acgttttgatcatttcacacgtattaagaaatgtaattaat 28849175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 5062135 - 5062189
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||| || |||| ||||||||||||||||||| |||| |||||||||||    
T  5062135 taaattatactacattttcatcatttcacacgtattaaaaaatgtaattaatttt 5062189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 11587771 - 11587821
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  ||||||||| |||||||||| ||||||||||||||||||||    
T  11587771 aaattatatgacgttttgagcatttcacacatattaagaaatataattaat 11587821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 14762611 - 14762557
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  ||||||||  ||| ||||||||||||||||||||||||||||||    
T  14762611 taaattatatgacgttttgggcatgtcacacgtattaagaaatataattaatttt 14762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 41540992 - 41541042
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  41540992 aaattatacgacgttttgcgcatttcacacatattaagaaatataattaat 41541042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 1214835 - 1214794
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  1214835 gttttgaacatttaacacgtattaagaaatataattaatttt 1214794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 6899914 - 6899946
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||||||||||||||    
T  6899914 atttcacacgtattaagaaatataattaatttt 6899946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 7884311 - 7884351
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  7884311 acgttttgaccatttcacacgtattaagaaatgtaattaat 7884351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 16861771 - 16861811
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  16861771 acgttttggccatttcacacgtattaagaaatataattaat 16861811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 17524579 - 17524635
Alignment:
Q  107 tgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||||| ||  ||||||||| ||||||| |||||||||||||| ||||||||    
T  17524579 tgtcttaaattgtatgacgttttgaccatttcatacgtattaagaaatgtaattaat 17524635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 28868980 - 28868940
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  28868980 acgttttggtcatttcacacgtattaagaaatgtaattaat 28868940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 31692992 - 31692952
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  31692992 acgttttggtcatttcacacgtattaagaaatgtaattaat 31692952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 38194489 - 38194529
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  38194489 acgttttggtcatttcacacgtattaagaaatgtaattaat 38194529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 43536815 - 43536870
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||| ||  ||||||||  ||||||| |||||||||||||||||||||||    
T  43536815 gtcttaaattgtaagacgttttggccatttcatacgtattaagaaatataattaat 43536870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 4174804 - 4174754
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| |||||||| | ||||||||||||||||||||| ||||||||    
T  4174804 aaattgtacgacgttttggttatttcacacgtattaagaaatgtaattaat 4174754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 14584637 - 14584675
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  14584637 gttttggtcatttcacacgtattaagaaatgtaattaat 14584675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 16736457 - 16736495
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  16736457 gttttgatcatttcacacgtattaaaaaatgtaattaat 16736495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 18526601 - 18526551
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  ||||||||  |||||||||||||||||||||| ||||||||    
T  18526601 aaattatatgacgttttggccatttcacacgtattaagaaatgtaattaat 18526551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 33299473 - 33299507
Alignment:
Q  132 tcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||| |||||    
T  33299473 tcatttcacacgtattaagaaatataatttatttt 33299507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 40325347 - 40325385
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  40325347 gttttgaccatttcacacgtattaagaaatgtaattaat 40325385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 44012480 - 44012426
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||| |||||||||| |||| || ||||  ||||||||||    
T  44012480 taaattatacaacgttttggtcatttcacaggtatcaaaaaatgaaattaatttt 44012426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 3562290 - 3562343
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  ||||||||  |||||||| ||||||||||||| |||||||||||    
T  3562290 aaattatatgacgttttgggcatttcacgcgtattaagaaatgtaattaatttt 3562343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 23550900 - 23550867
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||| ||||||||||||||||    
T  23550900 catttcacacgtattaaaaaatataattaatttt 23550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 28481841 - 28481906
Alignment:
Q  101 tctatttgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||| ||||| ||||||||  |||||||  |||||||||| ||||||| |||| |||||||||||    
T  28481841 tctatctgtctcaaattatatgacgtttttgtcatttcacatgtattaataaatgtaattaatttt 28481906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 899385 - 899425
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  899385 acgttttgagcatttcacacatattaagaaatgtaattaat 899425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 1367005 - 1366965
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  1367005 acgttttggccatttcacacgtattaagaaatgtaattaat 1366965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 2098991 - 2099031
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||| ||||||||||| ||||||||    
T  2098991 acgttttggtcatttcacacatattaagaaatgtaattaat 2099031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 3360466 - 3360406
Alignment:
Q  99 actctatttgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataat 159  Q
    |||| ||| ||| |||||||||| | ||||||| ||||||| ||| |||||||||||||||    
T  3360466 actccattcgtcctaaattatacgatgttttgaccatttcatacgcattaagaaatataat 3360406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 12113368 - 12113408
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  12113368 acgttttgaacatttcacacatattaagaaatgtaattaat 12113408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 15226099 - 15226059
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  15226099 acgttttggccatttcacacgtattaagaaatgtaattaat 15226059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 16872382 - 16872422
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  16872382 acgttttgagcatttcacacatattaagaaatgtaattaat 16872422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 23681740 - 23681780
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  ||||| |||||||||||||||||||||||||    
T  23681740 acgttttggccattttacacgtattaagaaatataattaat 23681780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26513947 - 26513907
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  26513947 acgttttggccatttcacacgtattaagaaatgtaattaat 26513907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 29441112 - 29441080
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||| |||||||||||    
T  29441112 atttcacacgtattaagaaatctaattaatttt 29441080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 33012322 - 33012282
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  33012322 acgttttggccatttcacacgtattaagaaatgtaattaat 33012282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 34141440 - 34141480
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  34141440 acgttttgaacatttcacacatattaagaaatgtaattaat 34141480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 36466794 - 36466826
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||| ||||||||||||||||    
T  36466794 atttcacacgtattaaaaaatataattaatttt 36466826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 37163556 - 37163596
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  37163556 acgttttgacaatttcacacgtattaagaaatgtaattaat 37163596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 37954192 - 37954232
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  37954192 acgttttgaccatttcacatgtattaagaaatgtaattaat 37954232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 38045173 - 38045133
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||| |||||||||||| ||||||||    
T  38045173 acgttttggtcatttcacatgtattaagaaatgtaattaat 38045133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 38896481 - 38896521
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  38896481 acgttttggacatttcacacatattaagaaatataattaat 38896521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 39284455 - 39284415
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  39284455 acgttttgagcatttcacacatattaagaaatgtaattaat 39284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 41256223 - 41256263
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  41256223 acgttttgactatttcacacgtattaagaaatgtaattaat 41256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 44023428 - 44023468
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||  ||||||||||||||||||||||| ||||||||    
T  44023428 acgtttttgtcatttcacacgtattaagaaatgtaattaat 44023468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 45187171 - 45187131
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||| |||||||||||| ||||||||    
T  45187171 acgttttggtcatttcacatgtattaagaaatgtaattaat 45187131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 27689092 - 27689159
Alignment:
Q  99 actctatttgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||| ||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  27689092 actccatttgtcctaaattataagacgttttgagcatttcacacgtattaagaaatataattaatttt 27689159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 4503641 - 4503691
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||| |||||||||||||||||||||| ||||||||    
T  4503641 aaattgtacgacgttttgaccatttcacacgtattaagaaatgtaattaat 4503691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 24161891 - 24161853
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  24161891 gttttggtcatttcacacgtattaagaaatataattaat 24161853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 26941194 - 26941244
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||| ||||| |||||||||||||||||||||| ||||||||    
T  26941194 aaattatataacgctttgaccatttcacacgtattaagaaatgtaattaat 26941244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 40353646 - 40353696
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  ||||||||| |||||||||||||||||||||| ||||||||    
T  40353646 aaattataagacgttttgaccatttcacacgtattaagaaatgtaattaat 40353696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 17833170 - 17833129
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  17833170 gttttgaccatttcacacgtattaagaaatgtaattaatttt 17833129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 46343004 - 46342951
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  ||||||||  |||||||||||||||||||||| |||||||||||    
T  46343004 aaattatatgacgttttgggcatttcacacgtattaagaaatgtaattaatttt 46342951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 3264602 - 3264562
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  3264602 acgttttgagcatttcacacttattaagaaatataattaat 3264562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 7979252 - 7979212
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  7979252 acgttttgaccatttcacacgtattaagaaatgtaattaat 7979212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 23709818 - 23709778
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  23709818 acgttttggccatttcacacgtattaagaaatataattaat 23709778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 23824771 - 23824719
Alignment:
Q  114 aattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||| | ||||||| ||||||||||||||||| |||| |||||||||||    
T  23824771 aattatacgatgttttgaacatttcacacgtattaaaaaatgtaattaatttt 23824719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 27131351 - 27131383
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||||||||||||||    
T  27131351 atttcacacgtattaagaaatataattaatttt 27131383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 28703802 - 28703762
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  28703802 acgttttggtcatttcacacgtattaagaaatgtaattaat 28703762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 31466307 - 31466267
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  31466307 acgttttggtcatttcacacgtattaagaaatgtaattaat 31466267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 39430340 - 39430300
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  39430340 acgttttggtcatttcacacgtattaagaaatgtaattaat 39430300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 40704647 - 40704607
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  40704647 acgttttggccatttcacacgtattaagaaatataattaat 40704607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 42941148 - 42941108
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  42941148 acgttttggtcatttcacacgtattaagaaatgtaattaat 42941108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 43576996 - 43576956
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  43576996 acgttttggtcatttcacacgtattaagaaatgtaattaat 43576956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 5113874 - 5113929
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaattttt 167  Q
    |||||||||  ||||||||   ||||||||||||||||||||| ||||||||||||    
T  5113874 taaattatatgacgttttgggaatttcacacgtattaagaaatgtaattaattttt 5113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 31582002 - 31582045
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  31582002 acgttttggacatttcacacgtattaagaaatgtaattaatttt 31582045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 32778075 - 32778024
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatt 164  Q
    ||||||||  ||||||||  |||||||||||||||||||||| |||||||||    
T  32778075 aaattatatgacgttttgggcatttcacacgtattaagaaatgtaattaatt 32778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 48339704 - 48339665
Alignment:
Q  124 cgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  48339704 cgttttggtcatttcacacgtattaagaaatgtaattaat 48339665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 14054098 - 14054140
Alignment:
Q  124 cgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||    
T  14054098 cgttttgctcatttcacacgtattaagaaatgtaactaatttt 14054140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 14364126 - 14364168
Alignment:
Q  124 cgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||    
T  14364126 cgttttgctcatttcacacgtattaagaaatgtaactaatttt 14364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 21553631 - 21553577
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  || |||||| ||||||| || |||||||||||||||||||||||    
T  21553631 taaattataagacattttgaacatttcatacttattaagaaatataattaatttt 21553577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 45822972 - 45823022
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||| ||||||||||||||||||||    
T  45822972 aaattgtacgacgttttggacatttcacacatattaagaaatataattaat 45823022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 554018 - 553989
Alignment:
Q  137 tcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||    
T  554018 tcacacgtattaagaaatataattaatttt 553989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 9417635 - 9417668
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  9417635 catttcacacgtattaagaaatgtaattaatttt 9417668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 19293295 - 19293262
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  19293295 catttcacacgtattaagaaatgtaattaatttt 19293262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 45042231 - 45042190
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||| ||||| |||||||||||||||| |||||||||||    
T  45042231 gttttgaacattttacacgtattaagaaatgtaattaatttt 45042190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 8251894 - 8251862
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||| ||||||||||||||||    
T  8251894 atttcacacgtattaaaaaatataattaatttt 8251862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 12263909 - 12263869
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  12263909 acgttttggccatttcacacgtattaagaaatgtaattaat 12263869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 17611327 - 17611367
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||||||| |||||||| ||||||||    
T  17611327 acgttttggtcatttcacacgtagtaagaaatgtaattaat 17611367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 21177470 - 21177430
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  21177470 acgttttggccatttcacacgtattaagaaatgtaattaat 21177430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 25428439 - 25428399
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  25428439 acgttttgggcatttcacacatattaagaaatataattaat 25428399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25547733 - 25547773
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  25547733 acgttttgagcatttcacacatattaagaaatgtaattaat 25547773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 27059565 - 27059605
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  27059565 acgttttggccatttcacacgtattaagaaatgtaattaat 27059605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 27116435 - 27116475
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  27116435 acgttttgaccatttcacacatattaagaaatgtaattaat 27116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 29669531 - 29669491
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  29669531 acgttttggccatttcacacgtattaagaaatgtaattaat 29669491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 32466191 - 32466219
Alignment:
Q  135 tttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||    
T  32466191 tttcacacgtattaagaaatataattaat 32466219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 163
Target Start/End: Complemental strand, 32468054 - 32468026
Alignment:
Q  135 tttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||    
T  32468054 tttcacacgtattaagaaatataattaat 32468026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 32827126 - 32827166
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  32827126 acgttttgaccatttcacatgtattaagaaatgtaattaat 32827166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 33616637 - 33616597
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  33616637 acgttttggccatttcacacgtattaagaaatgtaattaat 33616597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 35144109 - 35144149
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  35144109 acgttttgaacatttcacacatattaagaaatgtaattaat 35144149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 36916925 - 36916885
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  36916925 acgttttgggcatttcacacgtattaagaaatgtaattaat 36916885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 37277943 - 37277903
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||| ||||||    
T  37277943 acgttttggccatttcacacgtattaagaaatatgattaat 37277903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 38589684 - 38589644
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  38589684 acgttttgagcatttcacacatattaagaaatgtaattaat 38589644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 39960902 - 39960942
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  39960902 acgttttggacatttcacacatattaagaaatataattaat 39960942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 40536807 - 40536847
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  40536807 acgttttggccatttcacacgtattaagaaatgtaattaat 40536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 43884148 - 43884188
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  43884148 acgttttggccatttcacacgtattaagaaatgtaattaat 43884188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 46774368 - 46774328
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  46774368 acgttttgggcatttcacacgtattaagaaatgtaattaat 46774328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 47604503 - 47604543
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  47604503 acgttttggccatttcacacgtattaagaaatgtaattaat 47604543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 3280868 - 3280926
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  3280868 gtctcaaattatacgacgttttggacatttcacacgtattaagaaatataattaatttt 3280926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 6540486 - 6540526
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  6540486 acgttttgatcatttcacacgtattaagaaatgtaattaat 6540526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 26551494 - 26551537
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  26551494 acgttttgaacatttaacacgtattaagaaatataattaatttt 26551537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 13352721 - 13352667
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  |||||||   ||||||||||||||||||||||||||||||||||    
T  13352721 taaattatatgacgttttaggcatttcacacgtattaagaaatataattaatttt 13352667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 25792417 - 25792363
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  |||||||   ||||||||||||||||||||||||||||||||||    
T  25792417 taaattatatgacgttttacacatttcacacgtattaagaaatataattaatttt 25792363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 5466927 - 5466960
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  5466927 catttcacacgtattaagaaatataattaatttt 5466960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 2458747 - 2458704
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  2458747 acgttttggccatttcacacgtattaagaaatgtaattaatttt 2458704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 10085970 - 10085927
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  10085970 acgttttgggcatttcacacgtattaagaaatgtaattaatttt 10085927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 487732 - 487674
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||| |||||||| |  |||||||  ||||||||||||||||||||| |||||||||||    
T  487732 gtctcaaattataaattgttttgagaatttcacacgtattaagaaatgtaattaatttt 487674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 163
Target Start/End: Original strand, 35369424 - 35369454
Alignment:
Q  133 catttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||    
T  35369424 catttcacacgtattaagaaatataattaat 35369454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 41457716 - 41457766
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||||||||||||||| ||||||||    
T  41457716 aaattgtacgacgttttggccatttcacacgtattaagaaatgtaattaat 41457766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 52551517 - 52551571
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  ||||||||| ||||||| |  |||||||||||||||||||||||    
T  52551517 taaattatatgacgttttgaacatttcatatttattaagaaatataattaatttt 52551571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 290280 - 290317
Alignment:
Q  126 ttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  290280 ttttgaccatttcacacgtattaagaaatgtaattaat 290317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 6597089 - 6597056
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||| ||||||||||||||||||||||||||||    
T  6597089 cattttacacgtattaagaaatataattaatttt 6597056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 17179299 - 17179332
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  17179299 catttcacacgtattaagaaatgtaattaatttt 17179332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 30093657 - 30093694
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaag 150  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  30093657 aaattatacgacgctttgatcatttcacacgtattaag 30093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 31181424 - 31181391
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  31181424 catttcacacgtattaagaaatgtaattaatttt 31181391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 39739624 - 39739591
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  39739624 catttcacacgtattaagaaatgtaattaatttt 39739591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 41620804 - 41620841
Alignment:
Q  126 ttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  41620804 ttttggtcatttcacacgtattaagaaatgtaattaat 41620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 8330399 - 8330359
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| |||||||||||| |||||||    
T  8330399 acgttttgagcatttcacacatattaagaaatacaattaat 8330359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 8768471 - 8768511
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  8768471 acgttttggccatttcacacgtattaagaaatgtaattaat 8768511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 15574886 - 15574926
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  15574886 acgttttgagcatttcacacatattaagaaatgtaattaat 15574926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 16011384 - 16011424
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  16011384 acgttttgagcatttcacacatattaagaaatgtaattaat 16011424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 16436315 - 16436275
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||| ||||||||||| ||||||||    
T  16436315 acgttttggtcatttcacacatattaagaaatgtaattaat 16436275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 19011034 - 19010994
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  19011034 acgttttgagcatttcacacatattaagaaatgtaattaat 19010994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 23549226 - 23549266
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  23549226 acgttttggccatttcacacgtattaagaaatgtaattaat 23549266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 28121513 - 28121473
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||  ||||||||||||||||||||||| ||||||||    
T  28121513 acgtttttgtcatttcacacgtattaagaaatgtaattaat 28121473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 29095506 - 29095466
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  29095506 acgttttgagcatttcacacatattaagaaatgtaattaat 29095466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 33487924 - 33487964
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  33487924 acgttttggccatttcacacgtattaagaaatgtaattaat 33487964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 35379536 - 35379576
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  35379536 acgttttggccatttcacacgtattaagaaatgtaattaat 35379576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 39282791 - 39282751
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  39282791 acgttttgagcatttcacacatattaagaaatgtaattaat 39282751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 39673520 - 39673560
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  39673520 acgttttggccatttcacacgtattaagaaatgtaattaat 39673560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 40403719 - 40403759
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  40403719 acgttttgagcatttcacacatattaagaaatgtaattaat 40403759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 42219609 - 42219649
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  42219609 acgttttggccatttcacacgtattaagaaatgtaattaat 42219649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 45268995 - 45269035
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| | ||||||||||||||||||||| ||||||||    
T  45268995 acgttttggttatttcacacgtattaagaaatgtaattaat 45269035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 46436304 - 46436344
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  46436304 acgttttggccatttcacacatattaagaaatataattaat 46436344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 49367264 - 49367304
Alignment:
Q  126 ttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||| |||||||||| ||||||||||| |||||||||||    
T  49367264 ttttgagcatttcacacatattaagaaatgtaattaatttt 49367304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 50309728 - 50309768
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  50309728 acgttttggccatttcacacgtattaagaaatgtaattaat 50309768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 52701811 - 52701851
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||| ||||||||||| ||||||||    
T  52701811 acgttttggtcatttcacacatattaagaaatgtaattaat 52701851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 52833858 - 52833818
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  52833858 acgttttgggcatttcacacatattaagaaatataattaat 52833818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 42813 - 42752
Alignment:
Q  105 tttgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||| |||||||| |||||||||| ||||||| |||||||||||||| |||||||||||    
T  42813 tttgtctcaaattatataacgttttgaacatttcaaacgtattaagaaatgtaattaatttt 42752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 39933069 - 39933029
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39933069 acgttttgatcatttcacacgtattaagaaatataattaat 39933029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 21582540 - 21582580
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21582540 acgttttggtcatttcacacgtattaagaaatataattaat 21582580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 9246294 - 9246244
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||  |||||||||||||||||||||| ||||||||    
T  9246294 aaattatataacgttttgggcatttcacacgtattaagaaatgtaattaat 9246244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 24807003 - 24806970
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  24807003 catttcacacgtattaagaaatataattaatttt 24806970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 33676 - 33720
Alignment:
Q  122 aacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  33676 aacgttttggtcatttcatacatattaagaaatataattaatttt 33720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 9577496 - 9577536
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  9577496 acgttttgaccatttcacacgtattaagaaatgtaattaat 9577536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 14342002 - 14341962
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  14342002 acgttttgggcatttcacacgtattaagaaatataattaat 14341962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 18094503 - 18094543
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  18094503 acgttttgggcatttcacacgtattaagaaatataattaat 18094543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 18652463 - 18652423
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  18652463 acgttttggccatttcacacgtattaagaaatataattaat 18652423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 29665573 - 29665533
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  29665573 acgttttgatcatttcacacatattaagaaatgtaattaat 29665533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 32292712 - 32292672
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  32292712 acgttttggccatttcacacgtattaagaaatataattaat 32292672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 36487542 - 36487499
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||    
T  36487542 acgttttgagcatttcacacatattaagaaatgtaattaatttt 36487499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 34381834 - 34381884
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||| ||||||||||||||||||||    
T  34381834 aaattgtacgacgttttgggcatttcacacatattaagaaatataattaat 34381884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 163
Target Start/End: Original strand, 39990235 - 39990265
Alignment:
Q  133 catttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||    
T  39990235 catttcacacgtattaagaaatataattaat 39990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 26091714 - 26091767
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||| || ||||||  ||||| |||||||||||||||| |||||||||||    
T  26091714 aaattatataatgttttggacattttacacgtattaagaaatgtaattaatttt 26091767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 28118911 - 28118960
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaa 162  Q
    ||||||||  ||||||||| |||||||||| ||||||||||| |||||||    
T  28118911 aaattataagacgttttgaacatttcacacatattaagaaatgtaattaa 28118960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 31196066 - 31196119
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||| ||| ||||||||  ||||||||||||||||| |||| |||||||||||    
T  31196066 aaattgtacgacgttttgggcatttcacacgtattaaaaaatgtaattaatttt 31196119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 40047578 - 40047545
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||| ||||||||||||||||    
T  40047578 catttcacacgtattaaaaaatataattaatttt 40047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 2914682 - 2914642
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  2914682 acgttttggccatttcacacgtattaagaaatgtaattaat 2914642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 3634182 - 3634142
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  3634182 acgttttgagcatttcacacatattaagaaatgtaattaat 3634142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 4431771 - 4431731
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||| ||||||||||| ||||||||    
T  4431771 acgttttggtcatttcacacatattaagaaatgtaattaat 4431731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 6335201 - 6335161
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  6335201 acgttttgggcatttcacacgtattaagaaatgtaattaat 6335161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 7458835 - 7458795
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||| ||||||||||| ||||||||    
T  7458835 acgttttggtcatttcacacatattaagaaatgtaattaat 7458795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 9249187 - 9249147
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  9249187 acgttttggccatttcacacgtattaagaaatgtaattaat 9249147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 9641278 - 9641238
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  9641278 acgttttggccatttcacacgtattaagaaatgtaattaat 9641238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 11248178 - 11248138
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  11248178 acgttttgacaatttcacacgtattaagaaatgtaattaat 11248138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 14153519 - 14153559
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  14153519 acgttttgggcatttcacacatattaagaaatataattaat 14153559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 18025922 - 18025962
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  18025922 acgttttggccatttcacacgtattaagaaatgtaattaat 18025962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 21195059 - 21195099
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  21195059 acgttttggccatttcacacgtattaagaaatgtaattaat 21195099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 22510659 - 22510619
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  22510659 acgttttggccatttcacacgtattaagaaatgtaattaat 22510619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26256558 - 26256518
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  26256558 acgttttgagcatttcacacatattaagaaatgtaattaat 26256518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 27534836 - 27534876
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||||||||||||| || ||||||||    
T  27534836 acgttttgaccatttcacacgtattaagagatgtaattaat 27534876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 32706990 - 32706950
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  32706990 acgttttggccatttcacacgtattaagaaatgtaattaat 32706950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 33629749 - 33629789
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||||||||||||||||  |||||||    
T  33629749 acgttttggtcatttcacacgtattaagaaatgaaattaat 33629789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 34900023 - 34900063
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||| ||| ||||||||||||||||||||||| ||||||||    
T  34900023 acgtattggtcatttcacacgtattaagaaatgtaattaat 34900063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 35584731 - 35584771
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  35584731 acgttttggccatttcacacgtattaagaaatgtaattaat 35584771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 35870189 - 35870149
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  35870189 acgttttgaacatttcacacatattaagaaatgtaattaat 35870149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 40555328 - 40555288
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  40555328 acgttttggccatttcacacgtattaagaaatgtaattaat 40555288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 37985782 - 37985742
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37985782 acgttttgatcatttcacacgtattaagaaatataattaat 37985742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 31839226 - 31839169
Alignment:
Q  109 tcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||| | |||||||||    
T  31839226 tcttaaattatacgacgttttggtcatttcaaacgtattaagaaatgtcattaatttt 31839169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 1684157 - 1684200
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  1684157 acgttttgatcattttacacgtattaagaaatgtaattaatttt 1684200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 21289125 - 21289070
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||| ||||| || ||||||||| ||||||||||||||||||||||| ||||||||    
T  21289125 gtctcaaattgtataacgttttggtcatttcacacgtattaagaaatgtaattaat 21289070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 22060906 - 22060863
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  22060906 acgttttgggcatttcacacgtattaagaaatataattaatttt 22060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 32068228 - 32068278
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||| |||||||||||||||||||||| ||||||||    
T  32068228 aaattgtacgacgttttgaccatttcacacgtattaagaaatgtaattaat 32068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 8983682 - 8983629
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| |||||||| | |||| ||||||||| ||||||||||||||||||    
T  8983682 aaattatacgacgttttgcttattttacacgtattcagaaatataattaatttt 8983629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 9527720 - 9527667
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  ||||||||  |||||||||||||||||||||| |||||||||||    
T  9527720 aaattatatgacgttttggccatttcacacgtattaagaaatgtaattaatttt 9527667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 6026874 - 6026914
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  6026874 acgttttggtcatttcacacgtattaagaaatgtaattaat 6026914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 14834251 - 14834211
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  14834251 acgttttggtcatttcacacgtattaagaaatgtaattaat 14834211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 29412089 - 29412049
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  29412089 acgttttggtcatttcacacgtattaagaaatgtaattaat 29412049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 30549592 - 30549632
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  30549592 acgttttgaccatttcacacgtattaagaaatgtaattaat 30549632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 30903841 - 30903789
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataatt 160  Q
    |||||||||||||||||||||| ||||||| ||  |||||||||||| |||||    
T  30903841 gtcttaaattatacaacgttttaatcattttacttgtattaagaaatgtaatt 30903789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 31072438 - 31072478
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  31072438 acgttttggtcatttcacacgtattaagaaatgtaattaat 31072478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 36598602 - 36598642
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  36598602 acgttttggtcatttcacacgtattaagaaatgtaattaat 36598642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 37988562 - 37988522
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  37988562 acgttttgataatttcacacgtattaagaaatgtaattaat 37988522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 4646400 - 4646455
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||| ||  ||||||||  |||||||||| ||||||||||||||||||||    
T  4646400 gtcttaaattgtatgacgttttgggcatttcacacatattaagaaatataattaat 4646455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 18449952 - 18449995
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  ||||||||||||||||||||| |||||||||||    
T  18449952 acgttttgagtatttcacacgtattaagaaatgtaattaatttt 18449995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 40649310 - 40649267
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  40649310 acgttttgggcatttcacacgtattaagaaatgtaattaatttt 40649267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 2048022 - 2048060
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  2048022 gttttgaccatttcacacgtattaagaaatgtaattaat 2048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 13196629 - 13196575
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  ||||||||| ||||||||||||||||  |||| |||||||||||    
T  13196629 taaattatatgacgttttgagcatttcacacgtattataaaatgtaattaatttt 13196575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 13375580 - 13375530
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||    
T  13375580 aaattgtacgacgttttgagcatttcacacatattaagaaatgtaattaat 13375530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 19240627 - 19240677
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  ||||||||| |||||||||| ||||||||||| ||||||||    
T  19240627 aaattatatgacgttttgagcatttcacacatattaagaaatgtaattaat 19240677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 22050480 - 22050530
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||||||||||||||| ||||||||    
T  22050480 aaattgtacgacgttttgtccatttcacacgtattaagaaatgtaattaat 22050530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 30564009 - 30564047
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  30564009 gttttggtcatttcacacgtattaagaaatgtaattaat 30564047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 32674405 - 32674455
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||    
T  32674405 aaattgtacgacgttttgaacatttcacacatattaagaaatgtaattaat 32674455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 38993742 - 38993704
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  38993742 gttttggtcatttcacacgtattaagaaatgtaattaat 38993704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 39958173 - 39958223
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||| |||||||||||||||||| |||| ||||||||    
T  39958173 aaattatatgacgttttggtcatttcacacgtattaaaaaatgtaattaat 39958223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 43521406 - 43521456
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||||||||||||||| ||||||||    
T  43521406 aaattgtacgacgttttggccatttcacacgtattaagaaatgtaattaat 43521456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 4979186 - 4979153
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||| ||||||||||||||||||||    
T  4979186 catttcacacgtagtaagaaatataattaatttt 4979153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 4997095 - 4997062
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||| ||||||||||||||||||||    
T  4997095 catttcacacgtagtaagaaatataattaatttt 4997062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 4826550 - 4826510
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  4826550 acgttttgagcatttcacacatattaagaaatgtaattaat 4826510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 5748480 - 5748520
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  5748480 acgttttggacatttcacacgtattaagaaatgtaattaat 5748520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 6596725 - 6596685
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  6596725 acgttttgagcatttcacacatattaagaaatgtaattaat 6596685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 9110890 - 9110850
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  9110890 acgttttggccatttcacacgtattaagaaatgtaattaat 9110850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 11216851 - 11216811
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  11216851 acgttttggccatttcacacgtattaagaaatgtaattaat 11216811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 13196877 - 13196929
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataatt 160  Q
    |||||||||||||  || ||||| |||||||||||||||||| |||| |||||    
T  13196877 gtcttaaattatatgacattttggtcatttcacacgtattaaaaaatgtaatt 13196929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 14780725 - 14780765
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  14780725 acgttttggccatttcacacgtattaagaaatgtaattaat 14780765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 16198651 - 16198611
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  16198651 acgttttggccatttcacacgtattaagaaatgtaattaat 16198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 22154035 - 22154075
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  22154035 acgttttggccatttcacacgtattaagaaatgtaattaat 22154075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 22375041 - 22375081
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  22375041 acgttttggccatttcacacgtattaagaaatgtaattaat 22375081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 29432705 - 29432745
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  29432705 acgttttgacaatttcacacgtattaagaaatgtaattaat 29432745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 35669945 - 35669905
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  35669945 acgttttggccatttcacacgtattaagaaatgtaattaat 35669905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 36846077 - 36846037
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  36846077 acgttttggccatttcacacgtattaagaaatgtaattaat 36846037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 37111024 - 37111064
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  37111024 acgttttggccatttcacacgtattaagaaatgtaattaat 37111064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 43257295 - 43257335
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  43257295 acgttttgggcatttcacacatattaagaaatataattaat 43257335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 134119 - 134066
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| |||||||||  |||||||||||||| ||||||||||||||||||    
T  134119 aaattatacgacgttttgagtatttcacacgtatttagaaatataattaatttt 134066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 7596131 - 7596074
Alignment:
Q  109 tcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||| || ||| |||||||||||||||||||| |||| |||||||||||    
T  7596131 tcttaaattatacgacatttagatcatttcacacgtattaaaaaatgtaattaatttt 7596074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 6087017 - 6087068
Alignment:
Q  114 aattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||| || ||||||| || |||||||||||||||||||||||    
T  6087017 aattatacaacgtttagagcatttca-acatattaagaaatataattaatttt 6087068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 10629339 - 10629379
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  10629339 acgttttggtcatttcacacgtattaagaaatgtaattaat 10629379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 14310789 - 14310829
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  14310789 acgttttgagcatttcacacatattaagaaatataattaat 14310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 34283602 - 34283562
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  34283602 acgttttggtcatttcacacgtattaagaaatgtaattaat 34283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 12058826 - 12058783
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  12058826 acgttttggccatttcacacgtattaagaaatgtaattaatttt 12058783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 14600459 - 14600497
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  14600459 gttttggtcatttcacacgtattaagaaatgtaattaat 14600497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 16466174 - 16466224
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||| ||||||||    
T  16466174 aaattgtacgacgttttgaccatttcatacgtattaagaaatgtaattaat 16466224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 24098487 - 24098437
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||||| |||||||||||||||||   |||||||||| ||||||||    
T  24098487 aaattatacaatgttttgatcatttcacatcaattaagaaatgtaattaat 24098437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 30239079 - 30239025
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||| || || ||||||| |||||||||| ||||||||||| |||||||||||    
T  30239079 taaattgtataatgttttgagcatttcacacatattaagaaatttaattaatttt 30239025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 163
Target Start/End: Original strand, 31022420 - 31022449
Alignment:
Q  134 atttcacacgtattaagaaatataattaat 163  Q
    ||||||||||||||||||||||||||||||    
T  31022420 atttcacacgtattaagaaatataattaat 31022449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 2603418 - 2603458
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  2603418 acgttttgggcatttcacacatattaagaaatataattaat 2603458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 3819861 - 3819821
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  3819861 acgttttgaccatttcacatgtattaagaaatgtaattaat 3819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 4131111 - 4131071
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  4131111 acgttttgggcatttcacacgtattaagaaatgtaattaat 4131071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 6334743 - 6334783
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  6334743 acgttttggccatttcacacgtattaagaaatgtaattaat 6334783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 9461833 - 9461793
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||| ||| ||||||||||| ||||||||||||||||||||    
T  9461833 acgtcttggtcatttcacacatattaagaaatataattaat 9461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 16524540 - 16524580
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  16524540 acgttttggccatttcacacgtattaagaaatgtaattaat 16524580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 17442065 - 17442025
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  17442065 acgttttggacatttcacacatattaagaaatataattaat 17442025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 18023814 - 18023782
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    |||| ||||||||||||||||||||||||||||    
T  18023814 attttacacgtattaagaaatataattaatttt 18023782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 24178486 - 24178446
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  24178486 acgttttggccatttcacacgtattaagaaatgtaattaat 24178446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 33517594 - 33517537
Alignment:
Q  109 tcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||| ||||||||| ||||||| ||||||||| |||||| |||||||||    
T  33517594 tcttaaattatacgacgttttgaacatttcatacgtattaaaaaatatgattaatttt 33517537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 22128979 - 22128939
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  22128979 acgttttgagcatttcacacgtattaagaaatataattaat 22128939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 44571002 - 44570962
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  44571002 acgttttgatcatttcacacgtattaagaaatgtaattaat 44570962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 14965596 - 14965553
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  14965596 acgttttgagcatttcatacgtattaagaaatataattaatttt 14965553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 30418973 - 30418923
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| || |||||||||| |||||||||||||||||||||| ||||||||    
T  30418973 aaattgtataacgttttgaccatttcacacgtattaagaaatgtaattaat 30418923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 37788144 - 37788094
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  ||||||||  |||||||||||||||||||||||||||||||    
T  37788144 aaattatatgacgttttggccatttcacacgtattaagaaatataattaat 37788094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 52184124 - 52184074
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||  |||||||||||||||||||||| ||||||||    
T  52184124 aaattatacgacgttttggccatttcacacgtattaagaaatgtaattaat 52184074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 3086087 - 3086120
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  3086087 catttcacacgtattaagaaatataattaatttt 3086120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 9542387 - 9542424
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataatt 160  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9542387 acgttttgagcatttcacacgtattaagaaatataatt 9542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 19878002 - 19877969
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  19878002 catttcacacgtattaagaaatataattaatttt 19877969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 26855568 - 26855535
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  26855568 catttcacacgtattaagaaatataattaatttt 26855535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 54315302 - 54315269
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  54315302 catttcacacgtattaagaaatataattaatttt 54315269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 10125503 - 10125543
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  10125503 acgttttggccatttcacacgtattaagaaatataattaat 10125543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 30049726 - 30049686
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  30049726 acgttttgaccatttcacacgtattaagaaatgtaattaat 30049686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 53690497 - 53690457
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  53690497 acgttttggtcatttcacacgtattaagaaatgtaattaat 53690457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 388302 - 388259
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  388302 acgttttgggcatttcacacgtattaagaaatgtaattaatttt 388259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 34491690 - 34491745
Alignment:
Q  108 gtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||| ||||||||  ||||||||| |||||||||| ||||||||||| ||||||||    
T  34491690 gtctcaaattatatgacgttttgagcatttcacacatattaagaaatgtaattaat 34491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 7257921 - 7257971
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||| ||||||||||||||||||||    
T  7257921 aaattgtacgacgttttgggcatttcacacatattaagaaatataattaat 7257971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 163
Target Start/End: Complemental strand, 16605436 - 16605406
Alignment:
Q  133 catttcacacgtattaagaaatataattaat 163  Q
    |||||||||||||||||||||||||||||||    
T  16605436 catttcacacgtattaagaaatataattaat 16605406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 51234724 - 51234774
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| ||||||||  |||||||||| ||||||||||| ||||||||    
T  51234724 aaattatacgacgttttgggcatttcacacatattaagaaatgtaattaat 51234774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 6284230 - 6284197
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  6284230 catttcacacgtattaagaaatgtaattaatttt 6284197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 9036780 - 9036743
Alignment:
Q  126 ttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  9036780 ttttgagcatttcacacgtattaagaaatgtaattaat 9036743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 23153904 - 23153871
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||| |||||||||||||||||||||||    
T  23153904 catttcacacatattaagaaatataattaatttt 23153871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 32385392 - 32385425
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||| |||||||||||||||||||||||    
T  32385392 catttcacacatattaagaaatataattaatttt 32385425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 41414091 - 41414128
Alignment:
Q  126 ttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  41414091 ttttgaccatttcacacgtattaagaaatgtaattaat 41414128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 42133590 - 42133623
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  42133590 catttcacacgtattaagaaatttaattaatttt 42133623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 288603 - 288563
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  288603 acgttttgcccatttcacacgtattaagaaatgtaattaat 288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 6629129 - 6629089
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  6629129 acgttttgggcatttcacacgtattaagaaatgtaattaat 6629089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 13800589 - 13800549
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  13800589 acgttttggccatttcacacgtattaagaaatgtaattaat 13800549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 16032549 - 16032509
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||| |||||||||||| ||||||||    
T  16032549 acgttttggtcatttcacatgtattaagaaatgtaattaat 16032509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 22843164 - 22843124
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  22843164 acgttttgacaatttcacacgtattaagaaatgtaattaat 22843124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 23138476 - 23138436
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  23138476 acgttttggccatttcacacgtattaagaaatgtaattaat 23138436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25367266 - 25367306
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  25367266 acgttttgaacatttcacacatattaagaaatgtaattaat 25367306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 30088620 - 30088660
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  30088620 acgttttgggcatttcacacgtattaagaaatgtaattaat 30088660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 30609489 - 30609449
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||| ||||||||||||||| ||||||||    
T  30609489 acgttttgagcatttcgcacgtattaagaaatgtaattaat 30609449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 33244791 - 33244831
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  33244791 acgttttggacatttcacacgtattaagaaatgtaattaat 33244831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 34002430 - 34002390
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  34002430 acgttttggccatttcacacgtattaagaaatgtaattaat 34002390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 34247014 - 34246974
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  34247014 acgttttgagcatttcacacatattaagaaatgtaattaat 34246974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 34736178 - 34736138
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| |||||||||||| |||||||    
T  34736178 acgttttgagcatttcacacatattaagaaatacaattaat 34736138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 37390754 - 37390714
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  37390754 acgttttgaacatttcacatatattaagaaatataattaat 37390714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 41947597 - 41947629
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||| |||||||||||    
T  41947597 atttcacacgtattaagaaatgtaattaatttt 41947629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 42179482 - 42179522
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  42179482 acgttttgggcatttcacacgtattaagaaatgtaattaat 42179522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 43050424 - 43050384
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  43050424 acgttttggccatttcacacgtattaagaaatgtaattaat 43050384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 47170707 - 47170747
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  47170707 acgttttggccatttcacacgtattaagaaatgtaattaat 47170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 50098430 - 50098390
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| | ||||||    
T  50098430 acgttttggtcatttcacacgtattaagaaatgttattaat 50098390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 52397714 - 52397754
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||||||||||| |||| ||||||||    
T  52397714 acgttttggtcatttcacacgtattaaaaaatgtaattaat 52397754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 56235408 - 56235368
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  56235408 acgttttggccatttcacacgtattaagaaatgtaattaat 56235368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 56513477 - 56513517
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  56513477 acgttttggccatttcacacgtattaagaaatgtaattaat 56513517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 390540 - 390593
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||| |||||||||  |||||||||||||||||||||| |||||||||||    
T  390540 aaattatataacgttttgggcatttcacacgtattaagaaatgtaattaatttt 390593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 42662471 - 42662524
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| ||||||||  |||||||||||||||||||||| |||||||||||    
T  42662471 aaattatacgacgttttgggcatttcacacgtattaagaaatgtaattaatttt 42662524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 8724538 - 8724498
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  8724538 acgttttgaccatttcacacgtattaagaaatataattaat 8724498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 9076425 - 9076385
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  9076425 acgttttgaccatttcacacgtattaagaaatataattaat 9076385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 38808346 - 38808306
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  38808346 acgttttggtcatttcacacgtattaagaaatataattaat 38808306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 44804742 - 44804794
Alignment:
Q  114 aattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||  ||||||| | ||||||||||||||||||||||||||||||||||    
T  44804742 aattataagacgttttaaacatttcacacgtattaagaaatataattaatttt 44804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 7673929 - 7673972
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||| |||||||||||||||||||||| |||||||||||    
T  7673929 acgttttgagcatttcacacgtattaagaaatgtaattaatttt 7673972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 54768982 - 54769036
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||  ||||||||| ||||||||||| || |||||||||||||||||||    
T  54768982 taaattataagacgttttgagcatttcacacgcataaagaaatataattaatttt 54769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 4610760 - 4610817
Alignment:
Q  107 tgtcttaaattatacaacgttttgatcatttcacacgtattaagaaatataattaatt 164  Q
    ||||| ||||||||| ||||||||  ||||||| || |||||||||||||||||||||    
T  4610760 tgtctcaaattatacgacgttttggacatttcatacatattaagaaatataattaatt 4610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 5136938 - 5136978
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  5136938 acgttttgagcatttcacacatattaagaaatataattaat 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 19556878 - 19556838
Alignment:
Q  126 ttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  19556878 ttttggtcatttcacacgtattaaaaaatataattaatttt 19556838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 29675118 - 29675078
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  29675118 acgttttggtcatttcacacgtattaagaaatgtaattaat 29675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 43185603 - 43185563
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  43185603 acgttttggtcatttcacacgtattaagaaatgtaattaat 43185563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 47497927 - 47497967
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| ||||||||||||||||||||||| ||||||||    
T  47497927 acgttttggtcatttcacacgtattaagaaatgtaattaat 47497967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 51380051 - 51380091
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  51380051 acgttttggccatttcacacgtattaagaaatataattaat 51380091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 43190512 - 43190555
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||  |||||||||||||||||||||| |||||||||||    
T  43190512 acgttttgggcatttcacacgtattaagaaatgtaattaatttt 43190555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 31229551 - 31229605
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||| |||||||||  |||| ||||||||||| |||| |||||||||||    
T  31229551 taaattatacgacgttttgaatattttacacgtattaacaaatttaattaatttt 31229605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 39290792 - 39290738
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaatttt 166  Q
    |||||| || || ||||| | ||||||||||||||||| ||||||||||||||||    
T  39290792 taaattgtataatgttttaagcatttcacacgtattaaaaaatataattaatttt 39290738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 42938220 - 42938182
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  42938220 gttttgagcatttcacacgtattaaaaaatataattaat 42938182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 4756578 - 4756525
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaattt 165  Q
    |||||||||  |||||||||  |||||||| |||||||||||| ||||||||||    
T  4756578 taaattatatgacgttttgacaatttcacatgtattaagaaatgtaattaattt 4756525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 20394024 - 20394057
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    |||||||||||||||||||||| |||||||||||    
T  20394024 catttcacacgtattaagaaatgtaattaatttt 20394057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 39144439 - 39144472
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||| ||||||||||||||||    
T  39144439 catttcacacgtattaaaaaatataattaatttt 39144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 4047101 - 4047141
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  4047101 acgttttgagcatttcacacatattaagaaatgtaattaat 4047141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 6466356 - 6466396
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  6466356 acgttttgggcatttcacacatattaagaaatataattaat 6466396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 14781152 - 14781112
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  14781152 acgttttgaccatttcacacatattaagaaatgtaattaat 14781112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 29517236 - 29517276
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  29517236 acgttttggccatttcacacgtattaagaaatgtaattaat 29517276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 30745111 - 30745071
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  30745111 acgttttgagcatttcacacatattaagaaatgtaattaat 30745071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 31289106 - 31289146
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  31289106 acgttttggccatttcacacgtattaagaaatgtaattaat 31289146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 31725881 - 31725841
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  31725881 acgttttggacatttcacacgtattaagaaatgtaattaat 31725841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 34663689 - 34663649
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  34663689 acgttttgagcatttcacacatattaagaaatgtaattaat 34663649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 34816927 - 34816967
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  34816927 acgttttggccatttcacacgtattaagaaatgtaattaat 34816967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 40643575 - 40643535
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  40643575 acgttttgagcatttcacacatattaagaaatgtaattaat 40643535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 41265770 - 41265730
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  41265770 acgttttggccatttcacacgtattaagaaatgtaattaat 41265730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 41980133 - 41980093
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  41980133 acgttttgagcatttcacacatattaagaaatgtaattaat 41980093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 43109851 - 43109811
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  43109851 acgttttggccatttcacacgtattaagaaatgtaattaat 43109811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 43599828 - 43599788
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  43599828 acgttttgagcatttcacacatattaagaaatgtaattaat 43599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 44048358 - 44048318
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  44048358 acgttttgagcatttcacacatattaagaaatgtaattaat 44048318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 47109085 - 47109125
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  47109085 acgttttggccatttcacacgtattaagaaatgtaattaat 47109125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 48910360 - 48910400
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||| |||||||||| ||||||||||| ||||||||    
T  48910360 acgttttgagcatttcacacatattaagaaatgtaattaat 48910400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 49609969 - 49610009
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  49609969 acgttttggccatttcacacgtattaagaaatgtaattaat 49610009  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 52262483 - 52262443
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  52262483 acgttttgggcatttcacacgtattaagaaatgtaattaat 52262443  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 52870460 - 52870500
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  52870460 acgttttggccatttcacacgtattaagaaatgtaattaat 52870500  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 14198 - 14145
Alignment:
Q  112 taaattatacaacgttttgatcatttcacacgtattaagaaatataattaattt 165  Q
    ||||||||| ||||||||| |||||| |||||||||||||||| |||| |||||    
T  14198 taaattatataacgttttggtcattttacacgtattaagaaatgtaataaattt 14145  T

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Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 10323 - 10356
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  10323 catttcacacgtattaagaaatataattaatttt 10356  T

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Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 20651 - 20684
Alignment:
Q  133 catttcacacgtattaagaaatataattaatttt 166  Q
    ||||||||||||||||||||||||||||||||||    
T  20651 catttcacacgtattaagaaatataattaatttt 20684  T

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Target: scaffold0130 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 22890 - 22940
Alignment:
Q  113 aaattatacaacgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||| ||| ||||||||  |||||||||||||||||||||| ||||||||    
T  22890 aaattgtacgacgttttggccatttcacacgtattaagaaatgtaattaat 22940  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 17715 - 17677
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  17715 gttttggtcatttcacacgtattaagaaatgtaattaat 17677  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 8693 - 8655
Alignment:
Q  125 gttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  8693 gttttggtcatttcacacgtattaagaaatgtaattaat 8655  T

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Target: scaffold0533 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 7466 - 7426
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  7466 acgttttggccatttcacacgtattaagaaatgtaattaat 7426  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 7854 - 7814
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  7854 acgttttggccatttcacacgtattaagaaatgtaattaat 7814  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 4017 - 3977
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  4017 acgttttggccatttcacacgtattaagaaatgtaattaat 3977  T

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Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 20530 - 20490
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  20530 acgttttggccatttcacacgtattaagaaatgtaattaat 20490  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 13567 - 13527
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    |||||||| |||||||||||||||||| |||| ||||||||    
T  13567 acgttttggtcatttcacacgtattaaaaaatgtaattaat 13527  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 1501 - 1461
Alignment:
Q  123 acgttttgatcatttcacacgtattaagaaatataattaat 163  Q
    ||||||||  |||||||||||||||||||||| ||||||||    
T  1501 acgttttggccatttcacacgtattaagaaatgtaattaat 1461  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 13709 - 13741
Alignment:
Q  134 atttcacacgtattaagaaatataattaatttt 166  Q
    |||||| ||||||||||||||||||||||||||    
T  13709 atttcatacgtattaagaaatataattaatttt 13741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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