View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9859_high_7 (Length: 210)

Name: NF9859_high_7
Description: NF9859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9859_high_7
NF9859_high_7
[»] chr7 (33 HSPs)
chr7 (4-210)||(11661993-11662199)
chr7 (4-167)||(16107860-16108023)
chr7 (4-169)||(14188293-14188458)
chr7 (7-125)||(1856444-1856562)
chr7 (7-125)||(13917616-13917734)
chr7 (5-125)||(42374348-42374468)
chr7 (7-125)||(25926343-25926461)
chr7 (4-125)||(13648169-13648290)
chr7 (63-168)||(3288759-3288865)
chr7 (70-169)||(14190891-14190990)
chr7 (63-182)||(21733844-21733964)
chr7 (63-182)||(21734403-21734523)
chr7 (63-183)||(29005016-29005134)
chr7 (4-81)||(13256580-13256657)
chr7 (148-210)||(831592-831654)
chr7 (148-210)||(1196772-1196834)
chr7 (148-210)||(34958593-34958655)
chr7 (74-126)||(4281081-4281133)
chr7 (28-79)||(38829047-38829098)
chr7 (28-73)||(15727461-15727506)
chr7 (28-79)||(19617282-19617333)
chr7 (4-58)||(17505075-17505129)
chr7 (4-58)||(17548085-17548139)
chr7 (28-81)||(15214465-15214518)
chr7 (28-79)||(27565815-27565866)
chr7 (4-58)||(11304075-11304129)
chr7 (4-58)||(14105538-14105592)
chr7 (4-58)||(14415555-14415609)
chr7 (102-207)||(23556331-23556435)
chr7 (94-168)||(40554518-40554592)
chr7 (4-45)||(18455712-18455753)
chr7 (102-183)||(23557520-23557600)
chr7 (94-167)||(48744506-48744579)
[»] chr2 (17 HSPs)
chr2 (4-210)||(21072647-21072853)
chr2 (4-210)||(41300888-41301094)
chr2 (18-167)||(6477238-6477387)
chr2 (7-121)||(31346010-31346124)
chr2 (63-168)||(22703923-22704029)
chr2 (74-128)||(27366587-27366641)
chr2 (28-81)||(10039147-10039200)
chr2 (153-206)||(22841965-22842019)
chr2 (28-76)||(21132671-21132719)
chr2 (28-79)||(201608-201659)
chr2 (28-79)||(6743385-6743436)
chr2 (4-58)||(20590393-20590447)
chr2 (4-58)||(23338510-23338564)
chr2 (4-58)||(13100845-13100899)
chr2 (94-207)||(21245658-21245771)
chr2 (4-45)||(22173101-22173142)
chr2 (4-45)||(43707171-43707212)
[»] chr1 (11 HSPs)
chr1 (4-210)||(28313236-28313442)
chr1 (18-207)||(13527676-13527865)
chr1 (4-125)||(45574063-45574184)
chr1 (4-125)||(22130069-22130190)
chr1 (63-183)||(7791545-7791663)
chr1 (28-79)||(21543043-21543094)
chr1 (28-79)||(42095029-42095080)
chr1 (4-58)||(297243-297297)
chr1 (94-183)||(52984200-52984289)
chr1 (28-79)||(2332148-2332198)
chr1 (4-45)||(13880660-13880701)
[»] chr3 (37 HSPs)
chr3 (1-210)||(10833267-10833473)
chr3 (4-210)||(18893570-18893775)
chr3 (4-169)||(42415-42580)
chr3 (4-183)||(13437126-13437304)
chr3 (4-169)||(16324540-16324705)
chr3 (18-207)||(17547433-17547622)
chr3 (7-125)||(15465985-15466103)
chr3 (7-125)||(5224213-5224331)
chr3 (7-125)||(26054478-26054596)
chr3 (4-124)||(43549703-43549820)
chr3 (63-181)||(34851286-34851405)
chr3 (63-168)||(29171853-29171957)
chr3 (63-183)||(17513775-17513893)
chr3 (161-210)||(10952689-10952738)
chr3 (161-210)||(10953618-10953667)
chr3 (74-126)||(13967839-13967891)
chr3 (74-126)||(13973314-13973366)
chr3 (28-81)||(11913708-11913761)
chr3 (28-79)||(12270568-12270619)
chr3 (28-79)||(19444573-19444624)
chr3 (28-79)||(19451139-19451190)
chr3 (15-81)||(13837039-13837105)
chr3 (28-75)||(10988901-10988948)
chr3 (28-79)||(14085518-14085569)
chr3 (28-79)||(14090919-14090970)
chr3 (28-79)||(14647118-14647169)
chr3 (28-79)||(49400518-49400569)
chr3 (4-58)||(10555194-10555248)
chr3 (4-58)||(55291712-55291766)
chr3 (28-81)||(51602611-51602664)
chr3 (94-169)||(18366514-18366589)
chr3 (4-58)||(3803701-3803755)
chr3 (94-207)||(52212394-52212506)
chr3 (4-58)||(54521650-54521704)
chr3 (4-45)||(50243700-50243741)
chr3 (94-179)||(52337945-52338030)
chr3 (4-44)||(24152509-24152549)
[»] chr8 (22 HSPs)
chr8 (4-169)||(8413748-8413913)
chr8 (4-169)||(11775601-11775766)
chr8 (4-169)||(19882835-19883000)
chr8 (7-125)||(14396954-14397072)
chr8 (4-125)||(25483485-25483606)
chr8 (74-169)||(18023476-18023571)
chr8 (74-126)||(30765950-30766002)
chr8 (28-81)||(364776-364829)
chr8 (28-81)||(20387399-20387451)
chr8 (28-81)||(22433701-22433754)
chr8 (28-81)||(42559541-42559594)
chr8 (31-81)||(20494436-20494486)
chr8 (28-79)||(3698589-3698641)
chr8 (28-76)||(23826127-23826175)
chr8 (28-75)||(44432848-44432895)
chr8 (94-168)||(32950877-32950951)
chr8 (28-73)||(15635191-15635235)
chr8 (4-45)||(17460331-17460372)
chr8 (4-45)||(20455874-20455915)
chr8 (4-45)||(20463082-20463123)
chr8 (28-73)||(21325861-21325905)
chr8 (4-45)||(23661184-23661225)
[»] chr6 (21 HSPs)
chr6 (4-169)||(23225857-23226022)
chr6 (4-169)||(13765234-13765399)
chr6 (4-152)||(23956750-23956898)
chr6 (4-169)||(31021720-31021886)
chr6 (7-125)||(27557553-27557671)
chr6 (7-125)||(23415795-23415910)
chr6 (94-210)||(29415515-29415631)
chr6 (74-128)||(24563400-24563454)
chr6 (28-79)||(8759532-8759583)
chr6 (28-79)||(8767279-8767330)
chr6 (28-81)||(1265-1318)
chr6 (28-81)||(8224-8277)
chr6 (28-81)||(1254744-1254797)
chr6 (28-73)||(1588655-1588700)
chr6 (28-81)||(34296279-34296332)
chr6 (85-125)||(17201123-17201163)
chr6 (28-79)||(14593717-14593768)
chr6 (28-75)||(7430509-7430556)
chr6 (4-45)||(14978665-14978706)
chr6 (28-73)||(15816757-15816801)
chr6 (4-45)||(20556156-20556197)
[»] chr5 (16 HSPs)
chr5 (4-169)||(33472563-33472728)
chr5 (4-169)||(27868577-27868739)
chr5 (63-210)||(23539711-23539859)
chr5 (4-125)||(18419339-18419460)
chr5 (63-168)||(10817758-10817864)
chr5 (63-126)||(22006928-22006992)
chr5 (15-81)||(21553475-21553541)
chr5 (28-79)||(43242596-43242647)
chr5 (15-81)||(21980153-21980219)
chr5 (28-81)||(36460957-36461009)
chr5 (94-183)||(21663129-21663217)
chr5 (28-79)||(22757903-22757955)
chr5 (94-180)||(8952029-8952115)
chr5 (4-58)||(41875703-41875757)
chr5 (94-183)||(22356890-22356978)
chr5 (4-45)||(22412974-22413015)
[»] chr4 (21 HSPs)
chr4 (4-169)||(28386131-28386296)
chr4 (4-183)||(45005832-45006008)
chr4 (63-210)||(4830116-4830264)
chr4 (63-210)||(4833411-4833559)
chr4 (63-181)||(13447475-13447594)
chr4 (63-157)||(2584156-2584251)
chr4 (85-169)||(15712694-15712778)
chr4 (4-81)||(18230628-18230705)
chr4 (28-210)||(24046438-24046619)
chr4 (63-126)||(16157740-16157804)
chr4 (148-210)||(15747515-15747577)
chr4 (28-81)||(56114848-56114901)
chr4 (4-169)||(13043768-13043934)
chr4 (4-58)||(16277398-16277452)
chr4 (4-58)||(53387008-53387062)
chr4 (28-79)||(11201492-11201543)
chr4 (28-79)||(11208223-11208274)
chr4 (15-73)||(15415974-15416031)
chr4 (4-58)||(33849630-33849684)
chr4 (4-45)||(23802528-23802569)
chr4 (4-48)||(49547064-49547108)
[»] scaffold0151 (1 HSPs)
scaffold0151 (4-167)||(9982-10145)
[»] scaffold0001 (2 HSPs)
scaffold0001 (7-169)||(176683-176845)
scaffold0001 (7-83)||(169330-169406)
[»] scaffold0278 (1 HSPs)
scaffold0278 (4-157)||(23731-23883)
[»] scaffold0058 (1 HSPs)
scaffold0058 (4-136)||(39845-39977)
[»] scaffold0021 (1 HSPs)
scaffold0021 (63-210)||(147568-147715)
[»] scaffold0453 (1 HSPs)
scaffold0453 (4-169)||(7013-7175)
[»] scaffold0422 (1 HSPs)
scaffold0422 (4-169)||(3851-4013)
[»] scaffold0200 (1 HSPs)
scaffold0200 (7-125)||(18484-18602)
[»] scaffold0293 (1 HSPs)
scaffold0293 (7-125)||(19343-19461)
[»] scaffold0117 (1 HSPs)
scaffold0117 (7-125)||(42562-42680)
[»] scaffold0051 (1 HSPs)
scaffold0051 (7-125)||(32033-32151)
[»] scaffold0309 (1 HSPs)
scaffold0309 (63-168)||(9083-9189)
[»] scaffold0720 (1 HSPs)
scaffold0720 (63-167)||(442-547)
[»] scaffold0123 (1 HSPs)
scaffold0123 (63-181)||(1254-1373)
[»] scaffold0490 (1 HSPs)
scaffold0490 (63-168)||(5827-5933)
[»] scaffold0080 (2 HSPs)
scaffold0080 (63-183)||(29928-30046)
scaffold0080 (63-183)||(35393-35511)
[»] scaffold1276 (1 HSPs)
scaffold1276 (4-81)||(1027-1104)
[»] scaffold0334 (1 HSPs)
scaffold0334 (4-81)||(2012-2089)
[»] scaffold0070 (1 HSPs)
scaffold0070 (4-81)||(8978-9054)
[»] scaffold0635 (1 HSPs)
scaffold0635 (28-81)||(7870-7923)
[»] scaffold0599 (1 HSPs)
scaffold0599 (28-81)||(984-1037)
[»] scaffold0077 (2 HSPs)
scaffold0077 (28-81)||(17291-17343)
scaffold0077 (28-81)||(22191-22244)
[»] scaffold0023 (1 HSPs)
scaffold0023 (4-169)||(163221-163387)
[»] scaffold0106 (1 HSPs)
scaffold0106 (28-79)||(39388-39439)
[»] scaffold0076 (2 HSPs)
scaffold0076 (28-79)||(29284-29335)
scaffold0076 (28-79)||(34685-34736)
[»] scaffold0028 (2 HSPs)
scaffold0028 (28-79)||(46118-46169)
scaffold0028 (28-79)||(51522-51573)
[»] scaffold0011 (1 HSPs)
scaffold0011 (28-79)||(173700-173751)
[»] scaffold0429 (1 HSPs)
scaffold0429 (94-180)||(1988-2074)
[»] scaffold0962 (1 HSPs)
scaffold0962 (94-183)||(602-690)
[»] scaffold0014 (1 HSPs)
scaffold0014 (15-87)||(189630-189701)
[»] scaffold0546 (1 HSPs)
scaffold0546 (36-79)||(9931-9974)
[»] scaffold0109 (1 HSPs)
scaffold0109 (36-79)||(3333-3376)
[»] scaffold0107 (1 HSPs)
scaffold0107 (94-180)||(3865-3951)
[»] scaffold1783 (1 HSPs)
scaffold1783 (28-73)||(1258-1302)
[»] scaffold0394 (1 HSPs)
scaffold0394 (4-45)||(12937-12978)
[»] scaffold0388 (1 HSPs)
scaffold0388 (36-73)||(15198-15235)
[»] scaffold0083 (1 HSPs)
scaffold0083 (4-45)||(42184-42225)
[»] scaffold0008 (1 HSPs)
scaffold0008 (28-73)||(11505-11549)
[»] scaffold0037 (1 HSPs)
scaffold0037 (143-183)||(71328-71368)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 210
Target Start/End: Original strand, 11661993 - 11662199
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11661993 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacataatcccaattatccaacctaagaacaacaaca 11662092  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattct 203  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11662093 tgttaaatcacaaattcagaatttatacactataattactgaatgttagcctcacccttaccttagttttgatgaacaaactcttacacaatcagattct 11662192  T
Q  204 ccccctt 210  Q
    |||||||    
T  11662193 ccccctt 11662199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 16108023 - 16107860
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16108023 acatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 16107924  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttacctt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16107923 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttacctt 16107860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 14188458 - 14188293
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14188458 acatcaattcttaacacaatttcgatggtttctacacatttcaattcaaaaatcaataatcaaaagctaatcccaattatccaacctaagaacaacaaca 14188359  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14188358 tgttaaatcaaaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttag 14188293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 1856562 - 1856444
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1856562 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 1856463  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  1856462 taaatcacaaattcagaat 1856444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 13917734 - 13917616
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13917734 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 13917635  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  13917634 taaatcacaaattcagaat 13917616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 42374468 - 42374348
Alignment:
Q  5 catcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacat 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42374468 catcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacatcaacat 42374369  T
Q  105 gttaaatcacaaattcagaat 125  Q
    |||||||||||||||||||||    
T  42374368 gttaaatcacaaattcagaat 42374348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 25926461 - 25926343
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25926461 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 25926362  T
Q  107 taaatcacaaattcagaat 125  Q
    ||||||| |||||||||||    
T  25926361 taaatcagaaattcagaat 25926343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 13648169 - 13648290
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13648169 acatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatctcaattatccaacctaagaacaacaaca 13648268  T
Q  104 tgttaaatcacaaattcagaat 125  Q
    ||||||||||||||||||||||    
T  13648269 tgttaaatcacaaattcagaat 13648290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 3288865 - 3288759
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3288865 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 3288766  T
Q  162 tacctta 168  Q
    |||||||    
T  3288765 tacctta 3288759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 14190990 - 14190891
Alignment:
Q  70 ctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14190990 ctaatcccaattatccaacctaagaacaacaacatgttaaatcaaaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttag 14190891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 21733964 - 21733844
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21733964 tcaaaacctaattcccaattatccaaactaagaaccacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 21733865  T
Q  162 taccttagttttgatgaacaa 182  Q
    ||||||| ||| || ||||||    
T  21733864 taccttaatttcgacgaacaa 21733844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 21734523 - 21734403
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21734523 tcaaaacctaattcccaattatccaaactaagaaccacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 21734424  T
Q  162 taccttagttttgatgaacaa 182  Q
    ||||||| ||| || ||||||    
T  21734423 taccttaatttcgacgaacaa 21734403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 29005016 - 29005134
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcctt 162  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| |||| ||||| |||||||||||||| |||||| |||| ||||    
T  29005016 tcaaaacctaatcccaattattcaacctaagaacaacaacacgttaattcacaaatttagaa-ttatatactatgattactgagtgttagtctcaccctt 29005114  T
Q  163 accttagttttgatgaacaaa 183  Q
    |||||||  ||||||||||||    
T  29005115 accttag-attgatgaacaaa 29005134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 13256580 - 13256657
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13256580 acatcaattcttaacacaatttcgatgatttctacacttttcaattcaaaaataaataatcaaaacctaatcccaatt 13256657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 831654 - 831592
Alignment:
Q  148 gttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  831654 gttagtctcacccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 831592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 1196834 - 1196772
Alignment:
Q  148 gttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1196834 gttagtctcacccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 1196772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 34958593 - 34958655
Alignment:
Q  148 gttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34958593 gttagtctcacccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 34958655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 4281081 - 4281133
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 126  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  4281081 tcccaattacctaacctaagaacaacaacatgttaaatcacaaattcagaatt 4281133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 38829047 - 38829098
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  38829047 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 38829098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15727506 - 15727461
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  15727506 atggtttctacacttttcaattcaaaaatctataatcaaaacctaa 15727461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 19617282 - 19617333
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  19617282 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 19617333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 17505129 - 17505075
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  17505129 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 17505075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 17548085 - 17548139
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  17548085 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 17548139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 15214465 - 15214518
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||| ||||  |||||||| ||||||||||||||||||||||||||    
T  15214465 atggtttctacattttttcattcaaaagtcaataatcaaaacctaatcccaatt 15214518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 27565815 - 27565866
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  || |||||||||||||||||||| |||||||||    
T  27565815 atggtttctacactttttcatacaaaaatcaataatcaaaacataatcccaa 27565866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 11304075 - 11304129
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  11304075 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 11304129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14105592 - 14105538
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | |||||||  |||||||||||| ||| |||||    
T  14105592 acatcaattcttaacacaattgccatggtttccacacttttcaatccaagaatca 14105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14415609 - 14415555
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | |||||||  |||||||||||| ||| |||||    
T  14415609 acatcaattcttaacacaattgccatggtttccacacttttcaatccaagaatca 14415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 23556331 - 23556435
Alignment:
Q  102 catgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa-ctcttacacaatcag 198  Q
    ||||||||||||  | |||||||||||  |||||||| |||| |||| |||||||||| |||||||||||  |||||||||||| ||| |||| |||| |    
T  23556331 catgttaaatca--atttcagaatttacatacactataattattgaaagttagcctcacccttaccttag-attgatgaacaaagctc-tacagaatctg 23556426  T
Q  199 attctcccc 207  Q
    |||||||||    
T  23556427 attctcccc 23556435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 40554592 - 40554518
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattt--atacactatgattactgaatgttagcctcatccttacctta 168  Q
    |||||| |||||||||||||  | ||||||||||  |||||||||||||| |||  |||||||||| ||||||||||    
T  40554592 aacaactacatgttaaatca--atttcagaattttcatacactatgattattgagagttagcctcacccttacctta 40554518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 18455753 - 18455712
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  18455753 acatcaattcttaacacaattaccatggtttctacacttttc 18455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 23557520 - 23557600
Alignment:
Q  102 catgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    ||||||||||||  | |||||||||||  |||||||| |||| |||| |||||||||| |||||||||||  ||||||||||||    
T  23557520 catgttaaatca--atttcagaatttaaatacactataattattgaaagttagcctcacccttaccttag-attgatgaacaaa 23557600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 48744506 - 48744579
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttacctt 167  Q
    |||||| |||||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| |||||||||    
T  48744506 aacaactacatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttacctt 48744579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 210
Target Start/End: Complemental strand, 21072853 - 21072647
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21072853 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaatctaatcccaattatccaacctaagaacaacaaca 21072754  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattct 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21072753 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttagttttgatgaacaaactcttacagaatcagattct 21072654  T
Q  204 ccccctt 210  Q
    |||||||    
T  21072653 ccccctt 21072647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 210
Target Start/End: Complemental strand, 41301094 - 41300888
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41301094 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcacaattatccaacctaagaacaacaaca 41300995  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattct 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41300994 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttagttttgatgaacaaactcttacacaatcagattct 41300895  T
Q  204 ccccctt 210  Q
    |||||||    
T  41300894 ccccctt 41300888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 6477387 - 6477238
Alignment:
Q  18 cacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacct-aatcccaattatccaacctaagaacaacaacatgttaaatcacaa 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  6477387 cacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaaattccaattatccaacctaagaacaacaacatgttaaatcacaa 6477288  T
Q  117 attcagaatttatacactatgattactgaatgttagcctcatccttacctt 167  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  6477287 attcagaa-ttatacactatgattactgaatgttagcctcacccttacctt 6477238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 31346010 - 31346124
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31346010 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatacaacctaagaacaacaacatgt 31346109  T
Q  107 taaatcacaaattca 121  Q
    |||||||||||||||    
T  31346110 taaatcacaaattca 31346124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 22703923 - 22704029
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  22703923 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaatttagaatttatacactatgattactaaatgttagcctcaccct 22704022  T
Q  162 tacctta 168  Q
    |||||||    
T  22704023 tacctta 22704029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 27366641 - 27366587
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaattta 128  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  27366641 tcccaattaccaaacctaagaacaacaacatgttaaatcacaaattcagaattta 27366587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 10039200 - 10039147
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  10039200 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 10039147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 22841965 - 22842019
Alignment:
Q  153 cctcatccttaccttagttttgatgaacaaa-ctcttacacaatcagattctccc 206  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  22841965 cctcacccttaccttagttttgatgaataaagctcttacacaatcagattctccc 22842019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 21132719 - 21132671
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcc 76  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  21132719 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcc 21132671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 201608 - 201659
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  201608 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 201659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 6743436 - 6743385
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  6743436 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 6743385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 20590447 - 20590393
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  20590447 acatcaattcttaacacaattgccatggtttctacacttttcaatccaataatca 20590393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 23338564 - 23338510
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||||||| |||||    
T  23338564 acatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatca 23338510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 13100899 - 13100845
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  13100899 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 13100845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 21245658 - 21245771
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa-ctcttac 190  Q
    |||||| |||||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| ||||||||| |  |||||||||||| ||||       
T  21245658 aacaactacatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttacctt-gaattgatgaacaaagctctaca 21245754  T
Q  191 acaatcagattctcccc 207  Q
    | |||||||||||||||    
T  21245755 aaaatcagattctcccc 21245771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 22173142 - 22173101
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  22173142 acatcaattcttaacacaattaccatggtttctacacttttc 22173101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43707212 - 43707171
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  43707212 acatcaattcttaacacaattgccatggtttctacacttttc 43707171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 210
Target Start/End: Original strand, 28313236 - 28313442
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28313236 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 28313335  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattct 203  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28313336 tgttaaatcacaaattcagaatttatacgctatgattactgaatgttagcttcacccttaccttagttttgatgaacaaactcttacacaatcagattct 28313435  T
Q  204 ccccctt 210  Q
    |||||||    
T  28313436 ccccctt 28313442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 13527865 - 13527676
Alignment:
Q  18 cacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaa-tcccaattatccaacctaagaacaacaacatgttaaatcacaa 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  13527865 cacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacataaatcccaattatccaacctaagaacaacaatatgttaaatcacaa 13527766  T
Q  117 attcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa-ctcttacacaatcagattctcccc 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| ||||   | |||||||||||||||    
T  13527765 attcagaa-ttatacactatgattactgaatgttagcctcatccttacctt-gaattgatgaacaaagctctacaaaaatcagattctcccc 13527676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 45574184 - 45574063
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45574184 acatcaattcttaacacaatttcgatggtttctgcacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 45574085  T
Q  104 tgttaaatcacaaattcagaat 125  Q
    |||||||||||||||| |||||    
T  45574084 tgttaaatcacaaattaagaat 45574063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 22130190 - 22130069
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  22130190 acatcaattcttaacacaattttgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcacaattatcaaacctaagaacaacaaca 22130091  T
Q  104 tgttaaatcacaaattcagaat 125  Q
    |||||||||| |||||||||||    
T  22130090 tgttaaatcataaattcagaat 22130069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 7791663 - 7791545
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcctt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||    
T  7791663 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaa-ttatacactatgattactgagtgttagtctcaccctt 7791565  T
Q  163 accttagttttgatgaacaaa 183  Q
    |||||||  ||||||||||||    
T  7791564 accttag-attgatgaacaaa 7791545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 21543043 - 21543094
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  21543043 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 21543094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 42095080 - 42095029
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  42095080 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 42095029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 297243 - 297297
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||||||| |||||    
T  297243 acatcgattcttaacacaattgccatggtttctacacttttcaattcaagaatca 297297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 52984200 - 52984289
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattt--atacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||||| |||||||||||||  | ||||||||||  |||||||||||||| |||  |||||||||| | |||||||| ||| ||||||||||    
T  52984200 aacaactacatgttaaatca--atttcagaatttgcatacactatgattattgagagttagcctcaccattaccttaatttagatgaacaaa 52984289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 2332198 - 2332148
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||    
T  2332198 atggtttctacactttttcattcaaaa-tcaataatcaaaacctaatcccaa 2332148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 13880701 - 13880660
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  13880701 acatcaattcttaacacaattaccatggtttctacacttttc 13880660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 10833473 - 10833267
Alignment:
Q  1 tggacatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaaca 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10833473 tggacatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatgaaaacctaatcccaattatccaacctaagaacaaca 10833374  T
Q  101 acatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagat 200  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  10833373 ---tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttgatgaacaaactcttacacaatcagat 10833277  T
Q  201 tctccccctt 210  Q
    ||||||||||    
T  10833276 tctccccctt 10833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 4 - 210
Target Start/End: Original strand, 18893570 - 18893775
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  18893570 acatcaattcttaacacaattacgatg-tttttacacttttcaattcaaaaatcaataatcaaaacaaaatcccaattatccaacctaagaacaacaaca 18893668  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattct 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  18893669 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcacccttaccttagttttgatgaacaaactcttacacaatgagattct 18893768  T
Q  204 ccccctt 210  Q
    |||||||    
T  18893769 ccccctt 18893775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 42415 - 42580
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42415 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 42514  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  42515 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 42580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 13437126 - 13437304
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13437126 acatcgattcttaacacaatttcgttggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 13437225  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||    
T  13437226 tgttaaatcataaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag-attgatgaacaaa 13437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 16324705 - 16324540
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16324705 acatcaattcttaacacaatttcaatggtttctacactttccaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaata 16324606  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  16324605 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 16324540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 17547622 - 17547433
Alignment:
Q  18 cacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacct-aatcccaattatccaacctaagaacaacaacatgttaaatcacaa 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  17547622 cacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaaatcccaattatctaacctaagaacaacaacatgttaaatcacaa 17547523  T
Q  117 attcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa-ctcttacacaatcagattctcccc 207  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||| |  |||||||||||| ||||   | |||||||||||||||    
T  17547522 attcagaa-ttatacactatgattactgaatgttagcctcaccctaacctt-gaattgatgaacaaagctctacaaaaatcagattctcccc 17547433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 15465985 - 15466103
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15465985 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 15466084  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  15466085 taaatcacaaattcagaat 15466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 5224213 - 5224331
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5224213 tcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatctaacctaagaacaacaacatgt 5224312  T
Q  107 taaatcacaaattcagaat 125  Q
    ||||||| |||||||||||    
T  5224313 taaatcataaattcagaat 5224331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 26054596 - 26054478
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  26054596 tcaattcttaacacaatttcgatggtttctacaattttcaattcaaaaatcaataatcaaaacctaatctcaattatccaacctaacaacaacaacatgt 26054497  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  26054496 taaatcacaaattcagaat 26054478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 43549820 - 43549703
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  43549820 acatcaattcttaacacaatttcgatggtttctacacttttcaatttaaaaatcaataatcaaaacctaatcccaattatccaacctaagaac---aaca 43549724  T
Q  104 tgttaaatcacaaattcagaa 124  Q
    |||||||||||||||||||||    
T  43549723 tgttaaatcacaaattcagaa 43549703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 34851405 - 34851286
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34851405 tcaaaacctaattctcaattatccaacctaagaacaaaaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 34851306  T
Q  162 taccttagttttgatgaaca 181  Q
    ||||||| ||| || |||||    
T  34851305 taccttaatttcgacgaaca 34851286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 29171957 - 29171853
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcctt 162  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||    
T  29171957 tcaaaacctaatcccaattatccaacctagaaacaacaacatgttaaatcacaaattcagaa-ttatacactatgattactgagtgttagtctcaccctt 29171859  T
Q  163 acctta 168  Q
    ||||||    
T  29171858 acctta 29171853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 17513775 - 17513893
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcctt 162  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||||| |||| ||||    
T  17513775 tcaaaacctaatcccaattattcaacctaagaacaacaacacgttaattcacaaattcagaa-ttatacactatgattactgagtgttagtctcaccctt 17513873  T
Q  163 accttagttttgatgaacaaa 183  Q
    |||||||  ||||||||||||    
T  17513874 accttag-attgatgaacaaa 17513893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 10952738 - 10952689
Alignment:
Q  161 ttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10952738 ttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 10952689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 10953667 - 10953618
Alignment:
Q  161 ttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10953667 ttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 10953618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 13967891 - 13967839
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 126  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  13967891 tcccaattaccaaacctaagaacaacaacatgttaaatcacaaattcagaatt 13967839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 13973366 - 13973314
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 126  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  13973366 tcccaattaccaaacctaagaacaacaacatgttaaatcacaaattcagaatt 13973314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 11913708 - 11913761
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  11913708 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 11913761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 12270619 - 12270568
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  12270619 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 12270568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 19444573 - 19444624
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  19444573 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 19444624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 19451139 - 19451190
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  19451139 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 19451190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 13837039 - 13837105
Alignment:
Q  15 taacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||   ||||||| |||||| |||||||||||||| |||| |||||||||||||||||||    
T  13837039 taacacaattgtcatggtttctacactcttcaattcaaaaattaatattcaaaacctaatcccaatt 13837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 10988948 - 10988901
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatc 75  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||    
T  10988948 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatc 10988901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 14085518 - 14085569
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  14085518 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 14085569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 14090919 - 14090970
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  14090919 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 14090970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 14647169 - 14647118
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  || ||||||||||||||||||||||||||||||    
T  14647169 atggtttctacactttttcatccaaaaatcaataatcaaaacctaatcccaa 14647118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 49400518 - 49400569
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  49400518 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 49400569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 10555194 - 10555248
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  10555194 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 10555248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 55291766 - 55291712
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  55291766 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 55291712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 51602664 - 51602611
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||| |||||||||||||||||||| |||||    
T  51602664 atggtttctacactttttcattcaaaagtcaataatcaaaacctaatctcaatt 51602611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 18366589 - 18366514
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||| |||||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| |||||||||||    
T  18366589 aacaactacatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttag 18366514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 3803701 - 3803755
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| |||||||||||||||   ||||||| ||||||||||||||||| |||||    
T  3803701 acatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatca 3803755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 52212506 - 52212394
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa-ctcttac 190  Q
    |||||| | |||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| |||||||||||  |||||||||||| ||| |||    
T  52212506 aacaactatatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttag-attgatgaacaaagctc-tac 52212411  T
Q  191 acaatcagattctcccc 207  Q
    | |||| ||||||||||    
T  52212410 aaaatctgattctcccc 52212394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 54521650 - 54521704
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  54521650 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 54521704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 50243700 - 50243741
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  50243700 acatcaattcttaacacaattaccatggtttctacacttttc 50243741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 52338030 - 52337945
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaa 179  Q
    |||||| |||||||||||||  | ||||||||| |  ||||||||||||| |||  |||||||||| |||||||||| || |||||||    
T  52338030 aacaaccacatgttaaatca--atttcagaattcacatacactatgattattgagagttagcctcacccttaccttaattctgatgaa 52337945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 24152549 - 24152509
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacactttt 44  Q
    ||||||||||||||||||||| | ||||||| |||||||||    
T  24152549 acatcaattcttaacacaattaccatggtttctacactttt 24152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 8413913 - 8413748
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8413913 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 8413814  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8413813 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 8413748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 11775601 - 11775766
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11775601 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattattcaacctaagaacaacaaca 11775700  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  11775701 tgttaaatcacaaattcagaatttatatactatgattactgaatgttagtctcacccttaccttag 11775766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 19882835 - 19883000
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19882835 acatcaatttttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataattaaaacctaatcccaattatccaacctaagaacaacaaca 19882934  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19882935 tgttaaatcacaaattcagaatttatacaatatgattactgaatgttagcctcacccttaccttag 19883000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 14397072 - 14396954
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14397072 tcaattcttaacacaatttcgatggtttctacacttttcaattaaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 14396973  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  14396972 taaatcacaaattcagaat 14396954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 25483606 - 25483485
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  25483606 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacataatcacaattatccaacctaagaacaacaaca 25483507  T
Q  104 tgttaaatcacaaattcagaat 125  Q
    ||||||||||||||||||||||    
T  25483506 tgttaaatcacaaattcagaat 25483485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 18023571 - 18023476
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  18023571 tcccaattatccaacctaagaacaacaaaatgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 18023476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 30766002 - 30765950
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 126  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  30766002 tcccaattaccgaacctaagaacaacaacatgttaaatcacaaattcagaatt 30765950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 364776 - 364829
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  364776 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 20387399 - 20387451
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20387399 atggtttctacacttttcaattcaaaaatcaataa-caaaacctaatcccaatt 20387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 22433754 - 22433701
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||  ||||| |||||||||||||| ||||||||||||||||||||||||    
T  22433754 atggtttccacactcttcaattcaaaaattaataatcaaaacctaatcccaatt 22433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 42559594 - 42559541
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||||    
T  42559594 atggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 42559541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 20494486 - 20494436
Alignment:
Q  31 gtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||| |||||||||  ||||||||||||||||| |||||||||||||||||    
T  20494486 gtttctacactttttcattcaaaaatcaataattaaaacctaatcccaatt 20494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 3698589 - 3698641
Alignment:
Q  28 atggtttttacacttttcaattcaaaa-atcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||| |||||||||||||||||||||||||    
T  3698589 atggtttctacactttttcattcaaaaaatcaataatcaaaacctaatcccaa 3698641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 23826127 - 23826175
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcc 76  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||||    
T  23826127 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcc 23826175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 44432848 - 44432895
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatc 75  Q
    ||||||| || ||||||  |||||||||||||||||||||||||||||    
T  44432848 atggtttctatactttttcattcaaaaatcaataatcaaaacctaatc 44432895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 32950877 - 32950951
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttacctta 168  Q
    |||||| |||||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| ||||||||||    
T  32950877 aacaactacatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttacctta 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15635235 - 15635191
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||    
T  15635235 atggtttctacacttt-caattcaaaaatctataatcaaaacctaa 15635191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 17460372 - 17460331
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  17460372 acatcaattcttaacacaattaccatggtttctacacttttc 17460331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 20455874 - 20455915
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  20455874 acatcaattcttaacacaattaccatggtttctacacttttc 20455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 20463082 - 20463123
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  20463082 acatcaattcttaacacaattaccatggtttctacacttttc 20463123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 21325905 - 21325861
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||    
T  21325905 atggtttctacacttttca-ttcaaaaatcaatattcaaaacctaa 21325861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 23661184 - 23661225
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  23661184 acatcaattcttaacacaattaccatggtttctacacttttc 23661225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 23226022 - 23225857
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23226022 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 23225923  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23225922 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 23225857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 13765234 - 13765399
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13765234 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaactatccaacctaagaacaacaaca 13765333  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  13765334 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcactcttaccttag 13765399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 23956750 - 23956898
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23956750 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaaa 23956849  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttag 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23956850 tgttaaatcacaaattcagaatttatacactatgattactgaatgttag 23956898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 31021886 - 31021720
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaa-tcaataatcaaaacctaatcccaattatccaacctaagaacaacaac 102  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31021886 acatcaattcttaacacaatttcgatagtttctacacttttcaattcaaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaac 31021787  T
Q  103 atgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  31021786 atgttaaatcacaaattcagaatttatacaatatgattactgaatgttagtctcacccttaccttag 31021720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 27557553 - 27557671
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27557553 tcaattattaacacaatttcgttggtttctacacttttcaattcaaaaatcaataatcaaaacataatcccaattatccaacctaagaacaacaacatgt 27557652  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  27557653 taaatcacaaattcagaat 27557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 23415795 - 23415910
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||||    
T  23415795 tcaattcttaacacaatttcgatggtttctacgcttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaag---aacaatatgt 23415891  T
Q  107 taaatcacaaattcagaat 125  Q
    ||||||||||||| |||||    
T  23415892 taaatcacaaatttagaat 23415910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 29415631 - 29415515
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttaca 191  Q
    |||||| |||||||||||||  | |||||| ||||  ||||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||||||||    
T  29415631 aacaactacatgttaaatca--atttcagagtttacatacactatgattattgagagttagcctcactcttaccttagttttgatgaacaaactcttaca 29415534  T
Q  192 caatcagattctccccctt 210  Q
    |||||||||||||||||||    
T  29415533 caatcagattctccccctt 29415515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 24563400 - 24563454
Alignment:
Q  74 tcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaattta 128  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  24563400 tcccaattaccaaacctaagaacaacaacatgttaaatcacaaattcagaattta 24563454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 8759583 - 8759532
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  8759583 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 8759532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 8767330 - 8767279
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  8767330 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 8767279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 1265 - 1318
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||||    
T  1265 atggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 8224 - 8277
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||||    
T  8224 atggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 1254744 - 1254797
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||||    
T  1254744 atggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 1254797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 1588655 - 1588700
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  1588655 atggtttctacacttttcaattcaaaaatctataatcaaaacctaa 1588700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 34296332 - 34296279
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||| ||||||||||||||||||||||||||    
T  34296332 atggtttctacactttttcattcaaaagtcaataatcaaaacctaatcccaatt 34296279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 17201163 - 17201123
Alignment:
Q  85 caacctaagaacaacaacatgttaaatcacaaattcagaat 125  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  17201163 caacctaagaacatcaacatgttaaatcacaaattcagaat 17201123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 14593768 - 14593717
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||||||||||||||||| |||||||||    
T  14593768 atggtttctacactttttcattcaaaaatcaataatcaaaacttaatcccaa 14593717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 7430509 - 7430556
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatc 75  Q
    ||||||| |||||||||  ||||||||||||||||||||||| |||||    
T  7430509 atggtttctacactttttcattcaaaaatcaataatcaaaacttaatc 7430556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14978706 - 14978665
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  14978706 acatcaattcttaacacaattaccatggtttctacacttttc 14978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15816801 - 15816757
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||    
T  15816801 atggtttctacacttt-caattcaaaaatctataatcaaaacctaa 15816757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 20556197 - 20556156
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  20556197 acatcaattcttaacacaattaccatggtttctacacttttc 20556156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 33472728 - 33472563
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33472728 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaacaacaacaaca 33472629  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  33472628 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 33472563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 27868739 - 27868577
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||    
T  27868739 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaac---aaca 27868643  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  27868642 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 27868577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 23539711 - 23539859
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  23539711 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaaattatacactatgattactgaatgttagcctcacact 23539810  T
Q  162 taccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23539811 taccttagttttgatgaacaatctcttacacaatcagattctccccctt 23539859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 18419339 - 18419460
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18419339 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacatcaaca 18419438  T
Q  104 tgttaaatcacaaattcagaat 125  Q
    ||||||||||||||||||||||    
T  18419439 tgttaaatcacaaattcagaat 18419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 10817758 - 10817864
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  10817758 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcaccct 10817857  T
Q  162 tacctta 168  Q
    |||||||    
T  10817858 tacctta 10817864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 22006992 - 22006928
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 126  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22006992 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 22006928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 21553541 - 21553475
Alignment:
Q  15 taacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||   ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||    
T  21553541 taacacaattgtcatggtttctacacttttcaattcaaaaatcaatgatcaaaacctaaacccaatt 21553475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 43242647 - 43242596
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  43242647 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaa 43242596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 21980219 - 21980153
Alignment:
Q  15 taacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||| ||| | ||||||| ||||||||| ||||||||||| || |||||||||||||||||||||    
T  21980219 taacactattgccatggtttctacactttttaattcaaaaataaaaaatcaaaacctaatcccaatt 21980153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 36460957 - 36461009
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36460957 atggtttctacacttttca-ttcaaaagtcaataatcaaaacctaatcccaatt 36461009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 21663217 - 21663129
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||||| |||||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| |||||||||||  ||||||||||||    
T  21663217 aacaactacatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttag-attgatgaacaaa 21663129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 22757955 - 22757903
Alignment:
Q  28 atggtttttacacttttcaattcaaaaa-tcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||||||||    
T  22757955 atggtttctacactttttcattcaaaaaatcaataatcaaaacctaatcccaa 22757903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 8952115 - 8952029
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaac 180  Q
    |||||| |||||||||||||  | |||||| ||||  ||||||||||||| |||  |||||||||| |||||||||| ||| |||||||    
T  8952115 aacaactacatgttaaatca--atttcagagtttacatacactatgattattgagagttagcctcacccttaccttaatttagatgaac 8952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 41875757 - 41875703
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| ||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  41875757 acatcgattcttaacacaattgccatggtttctacacttttcaatccaagaatca 41875703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 22356978 - 22356890
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||||| |||||||||||||  | |||||| ||||  ||||||||||||| |||  |||||||||| |||||||||||  ||||||||||||    
T  22356978 aacaactacatgttaaatca--atttcagagtttacatacactatgattattgagagttagcctcacccttaccttag-attgatgaacaaa 22356890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 22412974 - 22413015
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  22412974 acatcaattcttaacacaattaccatggtttctacacttttc 22413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 28386131 - 28386296
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28386131 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacataatcccaattatccaacctaagaacaacaaca 28386230  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  28386231 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 28386296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 4 - 183
Target Start/End: Original strand, 45005832 - 45006008
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||    
T  45005832 acatcaattcttaacacaatttcaatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaag---aacaaca 45005928  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||  ||||||||||    
T  45005929 tgttaaatcataaattcagaatttatacactatgattactgaatgttagcatcacccttaccttaattcagatgaacaaa 45006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 4830264 - 4830116
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  4830264 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaaattatacactatgattactgaatgttagcctcacact 4830165  T
Q  162 taccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4830164 taccttagttttgatgaacaatctcttacacaatcagattctccccctt 4830116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 63 - 210
Target Start/End: Complemental strand, 4833559 - 4833411
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  4833559 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaaattatacactatgattactgaatgttagcctcacact 4833460  T
Q  162 taccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4833459 taccttagttttgatgaacaatctcttacacaatcagattctccccctt 4833411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 13447475 - 13447594
Alignment:
Q  63 tcaaaacctaatccc-aattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  13447475 tcaaaacctaattcctaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcactct 13447574  T
Q  162 taccttagttttgatgaaca 181  Q
    ||||||| ||| || |||||    
T  13447575 taccttaatttcgacgaaca 13447594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 2584251 - 2584156
Alignment:
Q  63 tcaaaacctaatcc-caattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctca 157  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2584251 tcaaaacctaattctcaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctca 2584156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 15712778 - 15712694
Alignment:
Q  85 caacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  15712778 caacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagtctcacccttaccttag 15712694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 18230628 - 18230705
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18230628 acatcaattcttaacacaatttcgatgatttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 18230705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 28 - 210
Target Start/End: Complemental strand, 24046619 - 24046438
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt- 126  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||| |||||  | ||  |||  |||||  | || ||||||| ||  ||||||||     
T  24046619 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatctcaattcccaaatttaatcacaaccccttgctaaatcaaaa--tcagaatta 24046522  T
Q  127 tatacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    || | ||||| || | |||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24046521 tacaaactataatcattgagagttagcctcacacttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 24046438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 16157740 - 16157804
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 126  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16157740 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatt 16157804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 15747577 - 15747515
Alignment:
Q  148 gttagcctcatccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15747577 gttagtctcacccttaccttagttttgatgaacaaactcttacacaatcagattctccccctt 15747515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 56114901 - 56114848
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  56114901 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 56114848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 13043934 - 13043768
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataat-caaaacctaa-tcccaattatccaacctaagaacaacaa 101  Q
    ||||||||||||||||||||| | ||||||| |||||||||| | || ||| |||| |||  ||||||||| ||||||||  | ||   ||||||||| |    
T  13043934 acatcaattcttaacacaattactatggtttctacacttttctaatc-aaactcaacaatggaaaacctaattcccaattcccaaaatcaagaacaacta 13043836  T
Q  102 catgttaaatcacaaattcagaattt--atacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||  ||| |||||| |||  |||||||||||||| |||  |||||| ||| |||||||||||    
T  13043835 catgttaaat--caatttcagagtttacatacactatgattattgagagttagcatcacccttaccttag 13043768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 16277452 - 16277398
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  16277452 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 16277398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 53387062 - 53387008
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||| |||||    
T  53387062 acatcaattcttaacacaattgccatggtttctacacttttcaatccaagaatca 53387008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 11201543 - 11201492
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  || |||||||||||||||||||| |||||||||    
T  11201543 atggtttctacactttttcatccaaaaatcaataatcaaaacttaatcccaa 11201492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 11208274 - 11208223
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  || |||||||||||||||||||| |||||||||    
T  11208274 atggtttctacactttttcatccaaaaatcaataatcaaaacttaatcccaa 11208223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 15416031 - 15415974
Alignment:
Q  15 taacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    |||||| ||| | |||| || |||||||||||||||||||||| |||||||||||||||    
T  15416031 taacactattgccatggattctacacttttcaattcaaaaatc-ataatcaaaacctaa 15415974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 33849630 - 33849684
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatca 58  Q
    ||||| |||||||||||||||   ||||||| ||||||||||||||||| |||||    
T  33849630 acatcgattcttaacacaattgtcatggtttctacacttttcaattcaagaatca 33849684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 23802569 - 23802528
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  23802569 acatcaattcttaacacaattaccatggtttctacacttttc 23802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 49547108 - 49547064
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaat 48  Q
    ||||| ||||||||||||||| | ||||||| |||||||||||||    
T  49547108 acatcgattcttaacacaattgccatggtttctacacttttcaat 49547064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 4 - 167
Target Start/End: Original strand, 9982 - 10145
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9982 acatcaattcttaacacaatttcgatggtttctacacttttcaactcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaccaacaaca 10081  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttacctt 167  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  10082 tgttaaatcacaaattcagaatttatacactataattactgaatgttagcctcacccttacctt 10145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 176683 - 176845
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  176683 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatcgaacctaagaacaacaacatgt 176782  T
Q  107 taaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  176783 taaatcacaaattcaaaatttatacactatgattactgaatgttagtctcacccttaccttag 176845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 169330 - 169406
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattat 83  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  169330 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattat 169406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 23883 - 23731
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23883 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 23784  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctca 157  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23783 tgttaaatcac-aattcagaatttatacactatgattactgaatgttagcctca 23731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 39977 - 39845
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39977 acatcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatctaacctaagaacaacaaca 39878  T
Q  104 tgttaaatcacaaattcagaatttatacactat 136  Q
    |||||||||||||||||||||||||||||||||    
T  39877 tgttaaatcacaaattcagaatttatacactat 39845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 63 - 210
Target Start/End: Original strand, 147568 - 147715
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  147568 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaatttagaatttatacactatgattactgaatgttagcctcaccct 147667  T
Q  162 taccttagttttgatgaacaaactcttacacaatcagattctccccctt 210  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||    
T  147668 ta-cttagttttgatgaacaaactcttacacaatcagattctccccctt 147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 7175 - 7013
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    || |||||||    
T  7175 acatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacc---caaaaacaaca 7079  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  7078 tgttaaatcacaaattcagaatttatacactatgcttactgaatgttagtctcacccttaccttag 7013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 3851 - 4013
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaaca 103  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||   |||||||    
T  3851 acatcgattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataaccaaaacctaatcccaattatccaacccaag---aacaaca 3947  T
Q  104 tgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatccttaccttag 169  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||    
T  3948 tgttaaatcacaaattcagaatttatacactatgattattgaatgttagtctcacccttaccttag 4013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 18484 - 18602
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18484 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 18583  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  18584 taaatcacaaattcagaat 18602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 19461 - 19343
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19461 tcaattcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacttaatcccaattatccaacctaagaacaacaacatgt 19362  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  19361 taaatcacaaattcagaat 19343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 42562 - 42680
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42562 tcaattcttaacactatttcaatggtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 42661  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  42662 taaatcacaaattcagaat 42680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 32033 - 32151
Alignment:
Q  7 tcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaacctaagaacaacaacatgt 106  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  32033 tcaactcttaacacaatttcgatggtttctacacttttcaattcaaaaatcaataatcaaaacctaataacaattatccaacctaagaacaacaacatgt 32132  T
Q  107 taaatcacaaattcagaat 125  Q
    |||||||||||||||||||    
T  32133 taaatcacaaattcagaat 32151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 9083 - 9189
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9083 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 9182  T
Q  162 tacctta 168  Q
    |||||||    
T  9183 tacctta 9189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 547 - 442
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  547 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcaccct 448  T
Q  162 tacctt 167  Q
    ||||||    
T  447 tacctt 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 1373 - 1254
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||    
T  1373 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcataaattcagaatttatacactatgattactaaatgttagcctcaccct 1274  T
Q  162 taccttagttttgatgaaca 181  Q
    ||||||| ||| ||||||||    
T  1273 taccttaatttcgatgaaca 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 5827 - 5933
Alignment:
Q  63 tcaaaacctaat-cccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcct 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  5827 tcaaaacctaattcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattattgaatgttagcctcaccct 5926  T
Q  162 tacctta 168  Q
    |||||||    
T  5927 tacctta 5933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 29928 - 30046
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcctt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | |||||| |||||| |||| ||||    
T  29928 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaaccacaaattcagaa-ttatacactataactactgagtgttagtctcaccctt 30026  T
Q  163 accttagttttgatgaacaaa 183  Q
    ||| |||  ||||||||||||    
T  30027 accatag-attgatgaacaaa 30046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 35393 - 35511
Alignment:
Q  63 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaatcacaaattcagaatttatacactatgattactgaatgttagcctcatcctt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | |||||| |||||| |||| ||||    
T  35393 tcaaaacctaatcccaattatccaacctaagaacaacaacatgttaaaccacaaattcagaa-ttatacactataactactgagtgttagtctcaccctt 35491  T
Q  163 accttagttttgatgaacaaa 183  Q
    ||| |||  ||||||||||||    
T  35492 accatag-attgatgaacaaa 35511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 1027 - 1104
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  1027 acatcaactcttaacacaatttctatggtttctacacttttcaattcaaaaatcaaaaatcaaaacctaatcccaatt 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 2012 - 2089
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    |||||||||||||||||||||   || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2012 acatcaattcttaacacaattagcatagtttctacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 2089  T

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Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 8978 - 9054
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||||||||||||||||| | ||||||| |||||||||| | || ||||| ||||||||||||||||||||||||    
T  8978 acatcaattcttaacacaattgccatggtttctacacttttctaatc-aaaattaataatcaaaacctaatcccaatt 9054  T

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Target: scaffold0635 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 7870 - 7923
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  7870 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 7923  T

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Target: scaffold0599 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 984 - 1037
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  984 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatcccaatt 1037  T

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Target: scaffold0077 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 17343 - 17291
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17343 atggtttctacacttttca-ttcaaaaatcaataatcaaaacctaatcccaatt 17291  T

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Target: scaffold0077; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 22244 - 22191
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaatt 81  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||| |||||    
T  22244 atggtttctacactttttcattcaaaaatcaataatcaaaacctaatctcaatt 22191  T

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Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 163221 - 163387
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttcaattcaaaaatcaataatc-aaaacctaat-cccaattatccaacctaagaacaacaa 101  Q
    ||||||||||||||||||||| | ||||||| |||||||||| | |||||  |||| |||  |||||||||| |||||||  | ||   ||||||||| |    
T  163221 acatcaattcttaacacaattaccatggtttctacacttttctaatcaaac-tcaacaatggaaaacctaattcccaattcccaaaatcaagaacaacta 163319  T
Q  102 catgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttag 169  Q
    ||||||||||||  | |||||| ||||  ||||||||||||| |||  |||||||||| |||||||||||    
T  163320 catgttaaatca--atttcagagtttacatacactatgattattgagagttagcctcacccttaccttag 163387  T

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Target: scaffold0106 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 39388 - 39439
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  39388 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 39439  T

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Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 29335 - 29284
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  29335 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 29284  T

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Target: scaffold0076; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 34736 - 34685
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  34736 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 34685  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 46169 - 46118
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  46169 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 46118  T

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Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 51573 - 51522
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  51573 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 51522  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 173751 - 173700
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||||||||    
T  173751 atggtttctacactttttcattcaaaaaccaataatcaaaacctaatcccaa 173700  T

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Target: scaffold0429 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 2074 - 1988
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattt--atacactatgattactgaatgttagcctcatccttaccttagttttgatgaac 180  Q
    |||||| |||||||||||||  | ||||||||||  |||||||||||||| |||  |||||||||| |||||||||| ||| |||||||    
T  2074 aacaactacatgttaaatca--atttcagaatttgcatacactatgattattgagagttagcctcacccttaccttaatttagatgaac 1988  T

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Target: scaffold0962 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 690 - 602
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||||| |||||||||||||  | |||||||||||  ||||||||||||| |||  |||||||||| |||||||||||  ||||||||||||    
T  690 aacaactacatgttaaatca--atttcagaatttacatacactatgattattgagagttagcctcacccttaccttag-attgatgaacaaa 602  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 189630 - 189701
Alignment:
Q  15 taacacaatttcgatggtttttacacttttcaattcaaaaatcaataatcaaaacctaatcccaattatccaa 87  Q
    |||||| ||| | ||||||| |||||| ||||||||||||||| ||||||||||||||| ||| ||| |||||    
T  189630 taacaccattgccatggtttgtacactcttcaattcaaaaatc-ataatcaaaacctaacccccattttccaa 189701  T

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Target: scaffold0546 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 9974 - 9931
Alignment:
Q  36 tacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    |||||||||  |||||||||||||||||||||||||||| ||||    
T  9974 tacactttttcattcaaaaatcaataatcaaaacctaattccaa 9931  T

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Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 3333 - 3376
Alignment:
Q  36 tacacttttcaattcaaaaatcaataatcaaaacctaatcccaa 79  Q
    |||||||||  |||||||||||||||||||||||||||| ||||    
T  3333 tacactttttcattcaaaaatcaataatcaaaacctaattccaa 3376  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 3865 - 3951
Alignment:
Q  94 aacaacaacatgttaaatcacaaattcagaattta--tacactatgattactgaatgttagcctcatccttaccttagttttgatgaac 180  Q
    |||||| |||||||||||||  | ||||||||| |  ||||||||||||| |||  |||||||||| |||||||||| || ||||||||    
T  3865 aacaaccacatgttaaatca--atttcagaattcacatacactatgattattgagagttagcctcacccttaccttaattctgatgaac 3951  T

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Target: scaffold1783 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 1258 - 1302
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||    
T  1258 atggtttctacacttt-caattcaaaaatctataatcaaaacctaa 1302  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 12937 - 12978
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  12937 acatcaattcttaacacaattaccatggtttctacacttttc 12978  T

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Target: scaffold0388 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 15235 - 15198
Alignment:
Q  36 tacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  15235 tacacttttcaattcaaaaatcaacaattaaaacctaa 15198  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 42184 - 42225
Alignment:
Q  4 acatcaattcttaacacaatttcgatggtttttacacttttc 45  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  42184 acatcaattcttaacacaattaccatggtttctacacttttc 42225  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 11549 - 11505
Alignment:
Q  28 atggtttttacacttttcaattcaaaaatcaataatcaaaacctaa 73  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||    
T  11549 atggtttctacacttt-caattcaaaaatctataatcaaaacctaa 11505  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 71368 - 71328
Alignment:
Q  143 tgaatgttagcctcatccttaccttagttttgatgaacaaa 183  Q
    |||| ||||||||||||||||||||| ||| ||||||||||    
T  71368 tgaaggttagcctcatccttaccttaatttagatgaacaaa 71328  T

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