View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9860_low_2 (Length: 495)

Name: NF9860_low_2
Description: NF9860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9860_low_2
NF9860_low_2
[»] chr8 (49 HSPs)
chr8 (16-475)||(36483848-36484321)
chr8 (16-313)||(12579933-12580230)
chr8 (16-313)||(4246352-4246649)
chr8 (16-313)||(28875963-28876260)
chr8 (16-313)||(34900767-34901064)
chr8 (16-313)||(37668993-37669290)
chr8 (16-291)||(5539845-5540120)
chr8 (16-313)||(45216618-45216915)
chr8 (16-256)||(2872440-2872680)
chr8 (16-313)||(43771112-43771387)
chr8 (327-475)||(32638434-32638582)
chr8 (327-475)||(32760105-32760252)
chr8 (327-462)||(12579770-12579904)
chr8 (327-475)||(45216440-45216589)
chr8 (327-475)||(4246678-4246827)
chr8 (327-475)||(28875785-28875934)
chr8 (327-470)||(5540171-5540315)
chr8 (327-475)||(34900586-34900738)
chr8 (327-471)||(22201042-22201187)
chr8 (347-475)||(43770924-43771052)
chr8 (346-475)||(6028860-6028990)
chr8 (346-475)||(32877825-32877955)
chr8 (327-475)||(37669319-37669466)
chr8 (346-475)||(19436622-19436750)
chr8 (346-475)||(19572771-19572899)
chr8 (346-475)||(25022524-25022652)
chr8 (346-475)||(19947595-19947723)
chr8 (329-419)||(27108982-27109073)
chr8 (346-475)||(42949439-42949567)
chr8 (329-475)||(8170850-8170984)
chr8 (329-475)||(40412783-40412917)
chr8 (227-310)||(8171023-8171106)
chr8 (353-413)||(3892206-3892267)
chr8 (332-413)||(27968338-27968417)
chr8 (227-291)||(40412661-40412725)
chr8 (329-409)||(38388907-38388988)
chr8 (336-419)||(29355865-29355949)
chr8 (335-425)||(7411848-7411939)
chr8 (351-413)||(20182629-20182692)
chr8 (334-425)||(32425159-32425254)
chr8 (353-421)||(5818138-5818207)
chr8 (332-413)||(27886423-27886502)
chr8 (332-413)||(27945081-27945160)
chr8 (332-413)||(28025324-28025403)
chr8 (425-475)||(37372554-37372604)
chr8 (329-395)||(41098779-41098845)
chr8 (353-413)||(32844-32905)
chr8 (353-390)||(37372502-37372539)
chr8 (425-475)||(3892266-3892316)
[»] chr3 (63 HSPs)
chr3 (16-313)||(25936474-25936771)
chr3 (16-313)||(10224547-10224844)
chr3 (16-313)||(45532458-45532755)
chr3 (17-313)||(1679077-1679373)
chr3 (16-313)||(48123250-48123546)
chr3 (16-313)||(52505220-52505516)
chr3 (16-313)||(28705162-28705459)
chr3 (16-223)||(42464419-42464626)
chr3 (327-475)||(25936297-25936445)
chr3 (327-475)||(45532282-45532429)
chr3 (327-475)||(52505042-52505191)
chr3 (327-475)||(22610496-22610643)
chr3 (327-471)||(37996513-37996658)
chr3 (327-470)||(7327975-7328119)
chr3 (327-475)||(1678899-1679048)
chr3 (327-475)||(48123575-48123724)
chr3 (327-472)||(28705491-28705637)
chr3 (347-475)||(10224378-10224506)
chr3 (346-475)||(22311100-22311228)
chr3 (347-471)||(1528805-1528925)
chr3 (346-475)||(28882299-28882427)
chr3 (346-475)||(50286966-50287094)
chr3 (346-475)||(52121532-52121662)
chr3 (329-413)||(30787354-30787439)
chr3 (329-413)||(13352988-13353073)
chr3 (346-475)||(35390120-35390245)
chr3 (332-475)||(19421659-19421796)
chr3 (329-425)||(47642246-47642343)
chr3 (329-413)||(52684567-52684652)
chr3 (334-425)||(20509937-20510029)
chr3 (335-419)||(21006150-21006235)
chr3 (329-425)||(28968751-28968848)
chr3 (329-411)||(19878897-19878980)
chr3 (329-419)||(45057088-45057179)
chr3 (409-475)||(42464359-42464425)
chr3 (353-413)||(19349419-19349480)
chr3 (329-412)||(2567063-2567147)
chr3 (227-291)||(2567205-2567269)
chr3 (227-291)||(21006299-21006363)
chr3 (329-395)||(21157540-21157607)
chr3 (347-413)||(22289536-22289603)
chr3 (329-413)||(7899512-7899596)
chr3 (353-413)||(42229906-42229967)
chr3 (361-413)||(48333212-48333265)
chr3 (361-413)||(48334155-48334208)
chr3 (227-291)||(52684445-52684509)
chr3 (329-395)||(38888897-38888964)
chr3 (353-413)||(29916034-29916095)
chr3 (353-413)||(29965187-29965248)
chr3 (199-259)||(50522966-50523026)
chr3 (46-117)||(50523024-50523096)
chr3 (353-419)||(39664657-39664724)
chr3 (425-475)||(21006107-21006157)
chr3 (329-382)||(983426-983479)
chr3 (329-385)||(212746-212802)
chr3 (427-475)||(2567013-2567061)
chr3 (372-419)||(25701046-25701094)
chr3 (361-412)||(28548296-28548348)
chr3 (329-373)||(55268850-55268894)
chr3 (436-475)||(52684662-52684701)
chr3 (425-475)||(45057045-45057095)
chr3 (353-409)||(45347540-45347596)
chr3 (425-473)||(983494-983542)
[»] chr2 (38 HSPs)
chr2 (16-291)||(4169940-4170215)
chr2 (16-313)||(6497068-6497365)
chr2 (16-313)||(40308234-40308531)
chr2 (16-313)||(22484692-22484989)
chr2 (16-239)||(38601860-38602083)
chr2 (16-313)||(6124612-6124887)
chr2 (327-475)||(6496892-6497039)
chr2 (327-475)||(40308056-40308205)
chr2 (327-475)||(22485018-22485167)
chr2 (327-475)||(4169741-4169889)
chr2 (327-471)||(7807079-7807224)
chr2 (347-475)||(6124943-6125071)
chr2 (16-116)||(33325178-33325278)
chr2 (346-475)||(12819572-12819700)
chr2 (346-475)||(20537094-20537226)
chr2 (346-475)||(5371332-5371460)
chr2 (329-425)||(31235967-31236064)
chr2 (346-475)||(18301352-18301473)
chr2 (329-419)||(45158963-45159054)
chr2 (349-413)||(2319535-2319600)
chr2 (329-425)||(34146420-34146517)
chr2 (353-475)||(14824381-14824491)
chr2 (354-419)||(4355555-4355621)
chr2 (353-413)||(4562031-4562092)
chr2 (331-411)||(35342560-35342640)
chr2 (329-393)||(10573734-10573798)
chr2 (353-475)||(1005754-1005864)
chr2 (329-413)||(3545374-3545458)
chr2 (353-419)||(24585777-24585845)
chr2 (352-419)||(28746470-28746538)
chr2 (227-291)||(45159112-45159176)
chr2 (353-419)||(8482726-8482793)
chr2 (347-408)||(21104741-21104803)
chr2 (425-475)||(45158920-45158970)
chr2 (353-413)||(40431837-40431897)
chr2 (353-413)||(44156840-44156901)
chr2 (353-395)||(5588280-5588322)
chr2 (353-413)||(1776252-1776312)
[»] scaffold0037 (2 HSPs)
scaffold0037 (16-313)||(27182-27479)
scaffold0037 (327-388)||(27092-27153)
[»] chr7 (59 HSPs)
chr7 (16-313)||(11830113-11830410)
chr7 (16-313)||(27397513-27397810)
chr7 (16-313)||(40096082-40096379)
chr7 (16-313)||(36660891-36661186)
chr7 (16-223)||(39521195-39521402)
chr7 (327-475)||(36661215-36661363)
chr7 (327-474)||(11830439-11830585)
chr7 (327-471)||(48163678-48163823)
chr7 (327-471)||(27555069-27555214)
chr7 (327-475)||(27397338-27397484)
chr7 (327-471)||(16851053-16851198)
chr7 (327-471)||(27354191-27354336)
chr7 (346-475)||(26773312-26773442)
chr7 (327-475)||(40096408-40096560)
chr7 (328-475)||(47237970-47238117)
chr7 (346-475)||(1042799-1042929)
chr7 (346-475)||(16563974-16564102)
chr7 (346-475)||(16601560-16601688)
chr7 (16-114)||(38265122-38265220)
chr7 (346-475)||(8029066-8029196)
chr7 (206-296)||(11058542-11058632)
chr7 (329-425)||(23078890-23078987)
chr7 (346-475)||(4291928-4292055)
chr7 (346-475)||(19510882-19511003)
chr7 (329-425)||(33454307-33454404)
chr7 (353-419)||(23969935-23970002)
chr7 (353-419)||(48153784-48153851)
chr7 (329-425)||(1400049-1400146)
chr7 (32-117)||(25557636-25557721)
chr7 (347-413)||(19820791-19820858)
chr7 (353-413)||(26973296-26973357)
chr7 (409-473)||(39521396-39521460)
chr7 (329-475)||(35160101-35160237)
chr7 (329-413)||(15878217-15878302)
chr7 (329-425)||(36763572-36763674)
chr7 (329-425)||(36757793-36757894)
chr7 (329-425)||(36767317-36767418)
chr7 (349-475)||(38064927-38065041)
chr7 (232-291)||(9283797-9283856)
chr7 (353-419)||(21409629-21409696)
chr7 (232-291)||(25969627-25969686)
chr7 (336-413)||(9283654-9283732)
chr7 (336-413)||(25969751-25969829)
chr7 (329-378)||(21180073-21180122)
chr7 (199-268)||(25557719-25557788)
chr7 (353-413)||(36413609-36413669)
chr7 (351-413)||(44269979-44270042)
chr7 (232-291)||(47720024-47720083)
chr7 (353-395)||(554724-554766)
chr7 (342-413)||(9250104-9250176)
chr7 (232-291)||(9250246-9250304)
chr7 (329-388)||(40041615-40041675)
chr7 (330-380)||(11058686-11058734)
chr7 (425-475)||(23969892-23969942)
chr7 (366-407)||(24956501-24956543)
chr7 (425-475)||(25969828-25969878)
chr7 (425-475)||(36763536-36763585)
chr7 (431-475)||(9250055-9250099)
chr7 (431-475)||(9283605-9283649)
[»] chr4 (54 HSPs)
chr4 (16-313)||(31226763-31227060)
chr4 (16-313)||(53322765-53323062)
chr4 (16-313)||(52572615-52572912)
chr4 (16-313)||(8063493-8063790)
chr4 (20-313)||(3402970-3403263)
chr4 (28-313)||(41146043-41146327)
chr4 (16-285)||(52122363-52122632)
chr4 (16-296)||(14795432-14795712)
chr4 (327-475)||(41146356-41146503)
chr4 (327-475)||(53323091-53323239)
chr4 (327-475)||(52572941-52573085)
chr4 (327-475)||(3402792-3402941)
chr4 (327-475)||(14795758-14795907)
chr4 (327-475)||(8063312-8063464)
chr4 (352-475)||(31227117-31227240)
chr4 (346-475)||(28377267-28377397)
chr4 (327-471)||(38491991-38492129)
chr4 (372-475)||(5325237-5325340)
chr4 (346-475)||(5835200-5835328)
chr4 (329-425)||(52721594-52721691)
chr4 (329-425)||(55900929-55901026)
chr4 (329-419)||(24784612-24784703)
chr4 (329-419)||(24823563-24823654)
chr4 (331-413)||(39957930-39958013)
chr4 (329-419)||(44521833-44521924)
chr4 (346-475)||(43509656-43509780)
chr4 (329-413)||(3109098-3109183)
chr4 (329-413)||(24793524-24793609)
chr4 (329-413)||(17892488-17892573)
chr4 (329-413)||(36943909-36943994)
chr4 (32-117)||(54433562-54433647)
chr4 (227-291)||(24784490-24784554)
chr4 (353-419)||(1177219-1177286)
chr4 (353-419)||(31946036-31946102)
chr4 (353-419)||(36511742-36511809)
chr4 (358-419)||(51859042-51859104)
chr4 (329-393)||(46431748-46431811)
chr4 (347-409)||(42630275-42630338)
chr4 (232-291)||(52721477-52721536)
chr4 (16-69)||(5325343-5325396)
chr4 (239-291)||(39957818-39957870)
chr4 (353-411)||(40694312-40694371)
chr4 (353-475)||(47607343-47607453)
chr4 (425-475)||(31945993-31946043)
chr4 (372-425)||(49470559-49470613)
chr4 (353-395)||(51675031-51675073)
chr4 (358-413)||(258884-258941)
chr4 (334-395)||(722442-722503)
chr4 (426-475)||(37992300-37992349)
chr4 (426-475)||(55900892-55900941)
chr4 (361-411)||(2586588-2586639)
chr4 (334-384)||(754415-754465)
chr4 (425-475)||(24823520-24823570)
chr4 (199-257)||(54433645-54433703)
[»] chr6 (31 HSPs)
chr6 (16-313)||(7188176-7188473)
chr6 (16-313)||(1036212-1036509)
chr6 (16-291)||(8357306-8357580)
chr6 (132-296)||(22989040-22989204)
chr6 (132-296)||(23799192-23799356)
chr6 (327-471)||(7188001-7188147)
chr6 (327-471)||(31195573-31195718)
chr6 (327-475)||(1036031-1036183)
chr6 (327-475)||(8357631-8357779)
chr6 (346-475)||(31740433-31740563)
chr6 (346-475)||(32130278-32130406)
chr6 (329-425)||(10894300-10894397)
chr6 (329-424)||(7255161-7255258)
chr6 (329-425)||(6707821-6707919)
chr6 (329-413)||(3212809-3212894)
chr6 (353-413)||(19128395-19128456)
chr6 (329-392)||(13061189-13061252)
chr6 (329-395)||(26327535-26327601)
chr6 (353-413)||(234551-234612)
chr6 (336-475)||(32018343-32018470)
chr6 (232-291)||(3212692-3212751)
chr6 (361-409)||(22988923-22988972)
chr6 (361-409)||(23799424-23799473)
chr6 (353-413)||(27084216-27084277)
chr6 (227-284)||(32018222-32018279)
chr6 (331-379)||(31079841-31079889)
chr6 (426-475)||(3299362-3299411)
chr6 (356-411)||(11105554-11105610)
chr6 (347-413)||(13045174-13045241)
chr6 (425-475)||(3212893-3212943)
chr6 (353-395)||(13607590-13607632)
[»] chr5 (53 HSPs)
chr5 (16-313)||(26794389-26794686)
chr5 (16-313)||(9792721-9793018)
chr5 (16-313)||(12852535-12852832)
chr5 (17-313)||(33830187-33830483)
chr5 (16-313)||(1639185-1639482)
chr5 (16-285)||(32707325-32707594)
chr5 (16-223)||(30918777-30918984)
chr5 (327-475)||(9793047-9793196)
chr5 (327-475)||(39689949-39690098)
chr5 (176-313)||(39690127-39690264)
chr5 (327-475)||(1639009-1639156)
chr5 (346-475)||(10657215-10657345)
chr5 (347-475)||(26794220-26794348)
chr5 (346-475)||(5985696-5985825)
chr5 (177-289)||(9729570-9729680)
chr5 (329-419)||(27085589-27085680)
chr5 (332-413)||(22738081-22738162)
chr5 (329-425)||(17138035-17138132)
chr5 (329-425)||(26691856-26691954)
chr5 (329-425)||(26961588-26961686)
chr5 (327-427)||(33830512-33830611)
chr5 (347-425)||(3701322-3701401)
chr5 (329-475)||(11907531-11907665)
chr5 (329-392)||(18001781-18001844)
chr5 (409-475)||(30918978-30919044)
chr5 (353-413)||(1795635-1795696)
chr5 (353-413)||(26716515-26716576)
chr5 (353-413)||(26986255-26986316)
chr5 (329-419)||(30284394-30284483)
chr5 (347-425)||(15066449-15066528)
chr5 (353-419)||(25749848-25749915)
chr5 (353-419)||(27938401-27938468)
chr5 (329-425)||(5722217-5722314)
chr5 (353-413)||(14836574-14836635)
chr5 (361-425)||(21251734-21251799)
chr5 (353-413)||(43357574-43357635)
chr5 (329-395)||(5612253-5612320)
chr5 (232-291)||(30777346-30777405)
chr5 (358-419)||(7629293-7629355)
chr5 (327-396)||(12852861-12852931)
chr5 (336-413)||(30777203-30777281)
chr5 (227-291)||(6242979-6243043)
chr5 (329-393)||(34032602-34032666)
chr5 (227-310)||(11907409-11907492)
chr5 (353-413)||(3934602-3934663)
chr5 (329-393)||(41233546-41233611)
chr5 (352-413)||(1921023-1921086)
chr5 (352-419)||(6242817-6242887)
chr5 (425-473)||(34032674-34032722)
chr5 (425-475)||(6242774-6242824)
chr5 (425-475)||(7629348-7629398)
chr5 (372-411)||(9729431-9729471)
chr5 (431-475)||(30777154-30777198)
[»] chr1 (50 HSPs)
chr1 (16-310)||(30324134-30324427)
chr1 (16-313)||(6916260-6916557)
chr1 (16-313)||(38330862-38331159)
chr1 (16-313)||(8132595-8132892)
chr1 (16-313)||(52895099-52895396)
chr1 (32-313)||(5984616-5984897)
chr1 (16-242)||(28658775-28659001)
chr1 (28-313)||(25257043-25257327)
chr1 (16-285)||(1043587-1043855)
chr1 (16-313)||(3427285-3427560)
chr1 (327-475)||(25257356-25257503)
chr1 (327-471)||(5984926-5985069)
chr1 (327-471)||(36367402-36367547)
chr1 (327-475)||(28948427-28948576)
chr1 (176-313)||(28948605-28948742)
chr1 (327-475)||(30324459-30324606)
chr1 (327-475)||(28658621-28658770)
chr1 (327-471)||(37104389-37104534)
chr1 (347-471)||(36363278-36363402)
chr1 (327-475)||(6916079-6916231)
chr1 (327-475)||(38331188-38331340)
chr1 (347-475)||(3427616-3427744)
chr1 (327-472)||(8132921-8133067)
chr1 (346-475)||(43190014-43190144)
chr1 (327-475)||(52894918-52895070)
chr1 (346-475)||(31653035-31653163)
chr1 (346-475)||(14334528-14334656)
chr1 (346-475)||(13012616-13012737)
chr1 (329-475)||(24851710-24851844)
chr1 (329-425)||(47654904-47655001)
chr1 (346-475)||(37346576-37346703)
chr1 (329-411)||(36551624-36551707)
chr1 (353-419)||(9528653-9528720)
chr1 (329-393)||(3708100-3708164)
chr1 (356-419)||(9781887-9781951)
chr1 (329-411)||(24589918-24590002)
chr1 (353-419)||(34096362-34096429)
chr1 (353-413)||(34432230-34432291)
chr1 (221-285)||(1036886-1036949)
chr1 (353-419)||(10822636-10822703)
chr1 (336-394)||(2472736-2472794)
chr1 (353-413)||(29168189-29168250)
chr1 (353-413)||(29862039-29862100)
chr1 (357-412)||(10763899-10763955)
chr1 (362-425)||(37922465-37922529)
chr1 (347-413)||(32380873-32380940)
chr1 (357-418)||(14167315-14167377)
chr1 (425-472)||(2472682-2472729)
chr1 (425-475)||(29168249-29168299)
chr1 (425-478)||(37922516-37922569)
[»] scaffold0640 (1 HSPs)
scaffold0640 (16-285)||(7581-7850)
[»] scaffold0177 (1 HSPs)
scaffold0177 (32-285)||(25043-25297)
[»] scaffold0005 (2 HSPs)
scaffold0005 (16-296)||(44019-44299)
scaffold0005 (327-475)||(43824-43973)
[»] scaffold0112 (2 HSPs)
scaffold0112 (32-291)||(41502-41761)
scaffold0112 (327-449)||(41331-41451)
[»] scaffold0060 (2 HSPs)
scaffold0060 (16-223)||(29923-30130)
scaffold0060 (409-475)||(29863-29929)
[»] scaffold0250 (1 HSPs)
scaffold0250 (346-475)||(5901-6027)
[»] scaffold0285 (1 HSPs)
scaffold0285 (329-395)||(13618-13683)


Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 16 - 475
Target Start/End: Original strand, 36483848 - 36484321
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  36483848 gttcttcctcatgttgtgagagaaattggagtactttttcttttatccattctttgaaaataaacaaaatggatccaaaaagggtagaagatttggttta 36483947  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  36483948 tgtgcatactaatcttcaactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgtgcatgaaccgctt 36484047  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta-- 313  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| || |||| ||||||||      
T  36484048 gatggtgttggaattgagttggcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagatgtaaa 36484147  T
Q  314 --------tctggagagt----acatt-agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttcc 400  Q
             || |  |||    || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36484148 cgttagttacttgttagtgttaacttttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttcc 36484247  T
Q  401 ttttggatatagtgtagcattgatgtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||||||||||||||||||||||| |||| || |||||| ||||| |||||||| |||||||||||||||    
T  36484248 ttttggatatagtgtagcattgatgtataacactgatagtgctc-tttttatatatatttcgtatgtaattgact 36484321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 12580230 - 12579933
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  12580230 gttcttcctcatgttgtgagagaaattggtgtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggtttt 12580131  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  12580130 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacagtcaagaatgtgggacattagtggagatgcgcatgaaccgctt 12580031  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||| || |||| ||||||||    
T  12580030 gatggtgttggaattgagtcagcagagctgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagatgta 12579933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 4246352 - 4246649
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4246352 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 4246451  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4246452 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 4246551  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  4246552 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 4246649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 28876260 - 28875963
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28876260 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 28876161  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||  ||    
T  28876160 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataaaaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccattt 28876061  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||| ||| |||| || |||| ||||||||    
T  28876060 gatggtgttggaattgagttagcagagttgtctttagatgaatcagatttggaagttgatttgtatcttgataatgggaatggaggagaggagatgta 28875963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 34901064 - 34900767
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34901064 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 34900965  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  34900964 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 34900865  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  34900864 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 34900767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 37668993 - 37669290
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  37668993 gttcttcctcatgttgtgagagaaattggagtactttttcttttatccattctttgaaaagaaacaaaatggatccaaaaaaggtagaagatttggttta 37669092  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  37669093 tgtgcatactaatcttcaactcttgtcaaggaaagaagatggatataagaaaggacaatcaacaatgtgggacattagtggagatgtgcataaaccgctt 37669192  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| || |||| ||||||||    
T  37669193 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagatgta 37669290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 5539845 - 5540120
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||| | ||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5539845 gttcttccttctgttgtgagataaatttgagtactttctcttttatctattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 5539944  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  5539945 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagactgtgggacattagtgcagatgcgcatgaaccgctt 5540044  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  5540045 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatg 5540120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 45216915 - 45216618
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||||||||    
T  45216915 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattcttgaaaaagaaacaaaatggattcaaaaagggtagaagatttggttta 45216816  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  45216815 tgtgcatattaatcttcgactattgtcaaggaaataagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgtatgaaccgctt 45216716  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| |||| || |||| ||||||||    
T  45216715 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagtttatttgtatcttgatgatgggaatggaggagaggagatgta 45216618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 2872680 - 2872440
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2872680 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatcgaaaaagggtagaagatttggttta 2872581  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  2872580 tgtgcatactaatcttcgaatcttgtcaaggaaagaagatggatataagaaaggacaatcgagaatgtgggacattggtggagatccgcatgaaccgctt 2872481  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatga 256  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  2872480 gatggtgttggaattgagttagcagagttgtctttagatga 2872440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 43771387 - 43771112
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  43771387 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaaaatttgg-tta 43771289  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||                     |||||| |||    
T  43771288 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtg---------------------tgaaccactt 43771210  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  43771209 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 43771112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 32638582 - 32638434
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  32638582 ttagtactcatgtgttcttttttggatatagtgcttcttttttggatcgatattgtatagcactaacaagttccttttgaatatagtgtagcatcgatgt 32638483  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  32638482 atagcactgatggtgctctttttggtatatattgcgtatgtaattgact 32638434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 32760105 - 32760252
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32760105 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 32760204  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||| || |||||| |||||||||||||| |||||||||||||||    
T  32760205 ataacactgatagtgctc-tttttgtatatatttcgtatgtaattgact 32760252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 327 - 462
Target Start/End: Complemental strand, 12579904 - 12579770
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12579904 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 12579805  T
Q  427 atagcactaatggtgctcttttttgtatatattgcg 462  Q
    |||||||| || ||||||| ||||||||||||||||    
T  12579804 atagcactgatagtgctct-ttttgtatatattgcg 12579770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 45216589 - 45216440
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45216589 ttagtactgatgtgttctttttttggatataatgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatg 45216490  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  45216489 tatagcaatgatggtgctctttttggtatatattgcgtatgtaattgact 45216440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 4246678 - 4246827
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  4246678 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 4246777  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| || | |||||||||||||| |||||||||||||||||||||||||    
T  4246778 tataacaatgatggtgctctttttggtatatattgcgtatgtaattgact 4246827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 28875934 - 28875785
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28875934 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 28875835  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    | ||   || ||| |||||||||| |||||||||||||||||||||||||    
T  28875834 tttattcctgatgatgctctttttggtatatattgcgtatgtaattgact 28875785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 327 - 470
Target Start/End: Original strand, 5540171 - 5540315
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5540171 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatataatatagcactaacaagttccttttggatatagtgtagcattgatg 5540270  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaat 470  Q
    |||| |||| ||| |||||||||| |||||||||| |||||||||    
T  5540271 tataacactgatgatgctctttttggtatatattgtgtatgtaat 5540315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 34900738 - 34900586
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  34900738 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 34900639  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  34900638 tataacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 34900586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 22201187 - 22201042
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  22201187 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagtactaacaagtttcttttggatatagtgtagcattgatg 22201088  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||| ||||| |||||||||||||||||||||    
T  22201087 tataacactgttggtgctatttttggtatatattgcgtatgtaatt 22201042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 347 - 475
Target Start/End: Complemental strand, 43771052 - 43770924
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||    
T  43771052 tttggatatagtgattcttttttggatcgatatagtataacactaacaagttccttttatatatagtgtagcattgatgtataacactgatggtgctctt 43770953  T
Q  447 ttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||||||||||||||||||||||||    
T  43770952 tttggtatatattgcgtatgtaattgact 43770924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 6028860 - 6028990
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||  | ||||||    
T  6028860 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcattgatgtataacactgctcgtgctc 6028959  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||| ||||||||||||||||||    
T  6028960 ttttttgtatattttgcgtatgtaattgact 6028990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 32877825 - 32877955
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||| |||| |||||||||    
T  32877825 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcgttgatgtataacactgatggtgctc 32877924  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  32877925 tttttggtatattttgcgtatgtaattgact 32877955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 37669319 - 37669466
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  37669319 ttagtattgatgtgttcttttttggatatagtgcttcttttttggatcaatataatatagcactaacaagtttcttttggatatactgtagcattgatgt 37669418  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||  ||| || |||||| |||||||||||||| |||||||||||||||    
T  37669419 ataatactgatagtgctc-tttttgtatatatttcgtatgtaattgact 37669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 19436622 - 19436750
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||| | || ||||| |||    
T  19436622 ctttagatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataaccctgatggtactc 19436719  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  19436720 tttttggtatattttgcgtatgtaattgact 19436750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 19572771 - 19572899
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||| | || ||||| |||    
T  19572771 ctttagatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataaccctgatggtactc 19572868  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  19572869 tttttggtatattttgcgtatgtaattgact 19572899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 25022524 - 25022652
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||| |||||||||||||| ||||||||||||| || ||| |||| |||||||||||||||||||||||  |||| |||| |||||||||    
T  25022524 ctttggatatagtgtttcttttttggatcaatatagtatagcattatcaatgttctttttggatatagtgtagcattga--tataacactgatggtgctc 25022621  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| |||| |||||||||||||    
T  25022622 tttttggtatattttgcatatgtaattgact 25022652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 19947723 - 19947595
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||| ||| ||||||| |||||| || ||||||  |||| ||||  ||||||||    
T  19947723 ctttggatatagtgcttcttttttggatcgatatagtataacattaacaatgtttcttttgggtatagtataacattga--tataacactggtggtgctc 19947626  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||| | ||||||||||||||||||    
T  19947625 tttttggtatgttttgcgtatgtaattgact 19947595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 27109073 - 27108982
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  27109073 agtaccgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtataacactaacaattttccttttggatatagtatagca 27108982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 42949439 - 42949567
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||  |||| ||||||   |||||||||  |||| |||  ||| |||||    
T  42949439 ctttggatatagtgcttcttttttggatcgatatagtatcgcactaacaatgtttatttttgatataaaatagcattga--tataacaccgatgatgctc 42949536  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  42949537 tttttggtatattttgcgtatgtaattgact 42949567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 475
Target Start/End: Complemental strand, 8170984 - 8170850
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgta 427  Q
    ||||||||| || |||| ||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||             ||||    
T  8170984 agtactgatatgctcttttttcgatatagtgcttcttttttagatcgatatagtatagcactaccaatgttctttttggatat-------------tgta 8170898  T
Q  428 tagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  8170897 tagcactgatggtgctctttttggtatatattgtgtatgtaattgact 8170850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 475
Target Start/End: Original strand, 40412783 - 40412917
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgta 427  Q
    ||||||||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||| ||||  ||||||||||||             |    
T  40412783 agtactgatgtgttctttttttgatatagtgctttttttttagatcgatatagtatagcactaacaatgttctctttggatatagt-------------a 40412869  T
Q  428 tagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  40412870 tagcaccgatggtgctctttttggtatatattgtgtatgtaattgact 40412917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 8171106 - 8171023
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagat 310  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||  |||||| |||| |||||    
T  8171106 aattgagttagtagagttgtctttggatgaaccagatttggaagctgctttgtatcttgttgatggaaatagaggagaggagat 8171023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 3892206 - 3892267
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  3892206 tatagtgcttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagt 3892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 27968338 - 27968417
Alignment:
Q  332 actgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||| ||||||||||||| || |||||   |||||||||||||| ||||||||| ||||||||||||||||||    
T  27968338 actgatgtgttcttttttggatatagtgttttttttt---atcgatatagtataacactaacaatgttccttttggatatagt 27968417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 40412661 - 40412725
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||| |||| |||||| |||||    
T  40412661 aattgagttagtagagttatctttggatgaaccagatttggaagctggtttgtatcttgttgatg 40412725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 38388907 - 38388988
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggata 409  Q
    ||||||||||||||||| | ||||| ||| | |||||||||| |||||||||||||| ||||||||| |||| |||||||||    
T  38388907 agtactgatgtgttcttttatggatgtagagtttcttttttgaatcgatatagtataacactaacaatgttcattttggata 38388988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 29355865 - 29355949
Alignment:
Q  336 atgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||| |||||||||||||||||||||||  ||  |||||||||| ||||||||| ||| |||||| ||||||| |||||    
T  29355865 atgtgttcttttttggatatagtgcttcttttttttattaatatagtataacactaacaatgtttcttttgaatatagtatagca 29355949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 425
Target Start/End: Original strand, 7411848 - 7411939
Alignment:
Q  335 gatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||| |||| | |||||||||  ||||||||||||||||||||| ||||||||| |||  |||| |||||| | |||||||||||    
T  7411848 gatgtgttcttttttgaacatagtgctttctttttggatcgatatagtataacactaacaatgtttattttagatataatatagcattgatg 7411939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 20182629 - 20182692
Alignment:
Q  351 gatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||| |||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  20182629 gatatggtgcttcttttttttatcgatatagtataacactaacaatgttccttttggatatagt 20182692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 425
Target Start/End: Original strand, 32425159 - 32425254
Alignment:
Q  334 tgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa----gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||| |||| |||||||| ||||||||| ||| ||||||||||| |||||||||    |||| ||||| ||||||| || ||||||||    
T  32425159 tgatgtgttcttttttgaatatagtgtttcttttttagattgatatagtataacactaacaataatgttctttttgaatatagtataacattgatg 32425254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 421
Target Start/End: Complemental strand, 5818207 - 5818138
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcatt 421  Q
    |||||| ||||| |||||||| ||| ||||||||||||||||| |||||||||| ||||||| |||||||    
T  5818207 tatagtacttctgttttggattgatgtagtatagcactaacaatgttccttttgaatatagtatagcatt 5818138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 27886423 - 27886502
Alignment:
Q  332 actgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||| || ||||||||||||| || |||||   |||||||||||||| ||||||||| ||| ||||||||||||||    
T  27886423 actgatgtgttattttttggatatagtgttttttttt---atcgatatagtataacactaacaatgtttcttttggatatagt 27886502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 27945081 - 27945160
Alignment:
Q  332 actgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||| || ||||||||||||| || |||||   |||||||||||||| ||||||||| ||| ||||||||||||||    
T  27945081 actgatgtgttattttttggatatagtgttttttttt---atcgatatagtataacactaacaatgtttcttttggatatagt 27945160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 28025324 - 28025403
Alignment:
Q  332 actgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||| || ||||||||||||| || |||||   |||||||||||||| ||||||||| ||| ||||||||||||||    
T  28025324 actgatgtgttattttttggatatagtgttttttttt---atcgatatagtataacactaacaatgtttcttttggatatagt 28025403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 37372554 - 37372604
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||| |||||||||||||| | |||||||| ||||||||||||||    
T  37372554 gtatagcacttatggtgctctttttgggatatattgtgtatgtaattgact 37372604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 41098845 - 41098779
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||| ||||||||||| | ||||||||||| ||||| |||||||| |||||||||| || ||||||    
T  41098845 agtaccgatgtgttcttttatggatatagtgtttcttgtttggatcaatatagtataacattaacaa 41098779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 32844 - 32905
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| ||||| ||||||||||| |||||||||| ||||||||| ||| ||||||||||||||    
T  32844 tataatgctttttttttggatcaatatagtataacactaacaatgtttcttttggatatagt 32905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 390
Target Start/End: Original strand, 37372502 - 37372539
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcact 390  Q
    |||||||||||||||||||||||||||| |||||||||    
T  37372502 tatagtgcttcttttttggatcgatataatatagcact 37372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 3892266 - 3892316
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||| |||||||||||||| | |||||||| ||||||||||||||    
T  3892266 gtataacacttatggtgctctttttaggatatattgtgtatgtaattgact 3892316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-150; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 25936771 - 25936474
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25936771 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagaatagaagatttggttta 25936672  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  25936671 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaagaacaatcaagaatgtgggacattagtggagatgtgcatgaaccgctt 25936572  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  25936571 aatggtgttggaattgagttagcagagttgtctttggatgaaccagatttagaagctgatttgtatcttgatgatgagaatagatgagatgagatgta 25936474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 10224844 - 10224547
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||| ||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  10224844 gttcttcctcctgttgtaagagaaatttgagcactttctcttttatccattctttgaaaagaaataaaatggatccaaaaagggtagaagatttggttta 10224745  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10224744 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatatatgaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 10224645  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  10224644 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgggaatggaggagaagagatgta 10224547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 45532755 - 45532458
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45532755 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 45532656  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||  |||||| |||||||||||||||||||||||    
T  45532655 tgtgcatactaatctttgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtaagacattggtggagatgcgcatgaaccgctt 45532556  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||| || |||| ||||||||    
T  45532555 gatgatgttggaattgagttagcagagttgtctttggatgaacttgatttggaagctgatttgtatcttgatgatgggaatggaggagaggagatgta 45532458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 313
Target Start/End: Complemental strand, 1679373 - 1679077
Alignment:
Q  17 ttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttat 116  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1679373 ttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggtttat 1679274  T
Q  117 gtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttg 216  Q
    ||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1679273 gtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgcttg 1679174  T
Q  217 atggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  1679173 atggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 1679077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 48123250 - 48123546
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaa-ggatagaagatttggttt 114  Q
    ||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  48123250 gttcttcatcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaa--aacaaaatggatccaaaaaagggtagaagatttggttt 48123347  T
Q  115 atgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgct 214  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48123348 atgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgct 48123447  T
Q  215 tgatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| ||||||||    
T  48123448 tgatggtgttcgaatttagttagtagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgagaatggaggagaggagatgta 48123546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 52505516 - 52505220
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  52505516 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccatacttgaaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 52505417  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  52505416 tgtgcatattaatcttcgactattgtcaaggaaataagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 52505317  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  52505316 gatggtgttggaattgagttagcagagttgtctttggatg-accggatttgaaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 52505220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 28705162 - 28705459
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  28705162 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattcttttaaaagaaacaaaatggatccaaaaagggtagaagattttgttta 28705261  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||  |||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  28705262 tgtgcatattaatcttcgacttttgtcaagttaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 28705361  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  28705362 gatggtgttggaattgagttagcagagttgtctttggatgaaccgtatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 28705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 42464626 - 42464419
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42464626 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 42464527  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  42464526 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtaggacattagtggagatgcgcatgaaccgctt 42464427  T
Q  216 gatggtgt 223  Q
    ||| ||||    
T  42464426 gatagtgt 42464419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 25936445 - 25936297
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25936445 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 25936346  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25936345 atagcactaatggtgctctttttggtatatattgcgtatgtaattgact 25936297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 45532429 - 45532282
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45532429 ttagtactgatgtgttcttttttggatatagtgcttcttttttggattgatataatatagcactaacaagttccttttggatatagtgtagcattgatgt 45532330  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  45532329 atagcactgatggtgctct-ttttgtatatattgcgtatgtaattgact 45532282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 52505191 - 52505042
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52505191 ttagtactgatgtgttctttttttggatataatgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatg 52505092  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  52505091 tatagcactaatggtgctctttttagtatatattgcgtatgtaattgact 52505042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 22610643 - 22610496
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22610643 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 22610544  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||| || ||||||| ||||||||||||| |||||||||||||||    
T  22610543 ataacactgatagtgctct-ttttgtatatatttcgtatgtaattgact 22610496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 37996658 - 37996513
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37996658 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 37996559  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  37996558 tataacactgctggtgctctttttggtatatattgcgtatgtaatt 37996513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 327 - 470
Target Start/End: Original strand, 7327975 - 7328119
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7327975 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatg 7328074  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaat 470  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||    
T  7328075 tataacactactggtgctctttttggtatatattgcgtatgtaat 7328119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 1679048 - 1678899
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||    
T  1679048 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaggttcattttgaatatagtgtagcattgatg 1678949  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  1678948 tataacactgatggtgctctttttggtatatattgcgtatgtaattgact 1678899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 48123575 - 48123724
Alignment:
Q  327 ttagtactgatgtgttc-ttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||||| || || ||||||||||||| |||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  48123575 ttagtactgatgtggtcattttttggatatagtgattcttttttgaatcgacatagtataacacaaacaagttccttttggatatagtgtagcattgatg 48123674  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  48123675 tatagcactgatggtgctctttttggtatatattgcgtatgtaattgact 48123724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 327 - 472
Target Start/End: Original strand, 28705491 - 28705637
Alignment:
Q  327 ttagtactgatgtgttcttctttgga-tatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||| ||||||||||| ||| || ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  28705491 ttagtacggatgtgttctttttttgaatatagtgattcttttttggatcgatatagaatatcactaacaagttcattttggatatagtgtagcattgatg 28705590  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattg 472  Q
    |||| || | |||||||||||||| ||||||||||| ||||||||||    
T  28705591 tataacattgatggtgctctttttggtatatattgcatatgtaattg 28705637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 347 - 475
Target Start/End: Complemental strand, 10224506 - 10224378
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||   || ||| |||||||    
T  10224506 tttggatatagtgattcttttttggatcgatttagtataacactaacaagttccttttggatataatgtagcattgatgtttattcctgatgatgctctt 10224407  T
Q  447 ttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||||||||||||||||||||||||    
T  10224406 tttggtatatattgcgtatgtaattgact 10224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 22311100 - 22311228
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||| |||| |||||||||    
T  22311100 ctttggatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataacactgatggtgctc 22311197  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||| ||||||||||||||    
T  22311198 tttttggtatatcttgtgtatgtaattgact 22311228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 347 - 471
Target Start/End: Original strand, 1528805 - 1528925
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||| ||| ||||  ||||||||||    
T  1528805 tttggatatagtgattcttttttggatcgatatagtatagcactaacaagttcattt----tatagtgtagcattgatgcataacactgctggtgctctt 1528900  T
Q  447 ttttgtatatattgcgtatgtaatt 471  Q
    ||| |||||||||| ||||||||||    
T  1528901 tttggtatatattgtgtatgtaatt 1528925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 28882427 - 28882299
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||| ||| |||||||||||||| || ||||||  |||| |||| |||||||||    
T  28882427 ctttggatatagtgcttctttttatgatcgatatagtatagcattaacaatgtttcttttggatatagtataacattga--tataacactgatggtgctc 28882330  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  28882329 tttttggtatattttgcgtatgtaattgact 28882299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 50287094 - 50286966
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||| ||||||||||||||||||||||||||||  || || |||||||||||||||||| || ||||||  |||| |||| |||||||||    
T  50287094 ctttggatatagtgtttcttttttggatcgatatagtatagcatcaataatgttccttttggatatagtataacattga--tataacactgatggtgctc 50286997  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  50286996 tttttggtatattttgcgtatgtaattgact 50286966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 52121532 - 52121662
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||||| || | |||||||||    
T  52121532 ctttggatatagtgctctttttttggatcgatataatatagcactaacaatgttccttttggatgtagtataatattgatgtataacagtgatggtgctc 52121631  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    |||||  ||||| ||||||||||||||||||    
T  52121632 tttttgatatattttgcgtatgtaattgact 52121662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 30787439 - 30787354
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  30787439 agtactgatgtgttattttttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttagatatagt 30787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 13353073 - 13352988
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  13353073 agtactgatgtgttctttttttgatatagtgcttcttttttggatcgacacagtatagcactaacaatgttccttttggatatagt 13352988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 35390120 - 35390245
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| || ||||||  |||  |||   ||||||||    
T  35390120 ctttggatatagtgcttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtataacattga--tatgacac---tggtgctc 35390214  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| || |||||||||||||||    
T  35390215 tttttggtatattttacgtatgtaattgact 35390245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 475
Target Start/End: Original strand, 19421659 - 19421796
Alignment:
Q  332 actgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatag 430  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| || |||||       | |    |||||    
T  19421659 actgatgtattcttttttggatatagtgcttcttttttgaatcgatatagtataacactaacaatgttccttatgaatata-------aatataatatag 19421751  T
Q  431 cactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||    
T  19421752 cactaatggtgctctttttgggatatattgtgtatgtaattgact 19421796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 47642246 - 47642343
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||| || ||||||||    
T  47642246 agtactgatgtgttcttttttgaatatagcgtttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtataacattgatg 47642343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 52684567 - 52684652
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  52684567 agtactaatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtataacactaacaatgttctttttggatatagt 52684652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 425
Target Start/End: Complemental strand, 20510029 - 20509937
Alignment:
Q  334 tgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||| ||||| | |||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||| || ||||||||    
T  20510029 tgatgtattcttttatggatatagtgcttcttttttggatcgacatagtataacactaacaatgttcattttggatatagtatatcattgatg 20509937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 21006235 - 21006150
Alignment:
Q  335 gatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||| ||| |||||| |||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||| |||||    
T  21006235 gatgtgttcttttttcgatataatgcttcttttttagatcgatatagtataacactaacaatgttctttttggatatagtatagca 21006150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 28968751 - 28968848
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||| |||||||||||| |||| |||||||| ||||||||| |||||||||| |||| ||||||||| |||| ||||||||||||| || ||||||||    
T  28968751 agtaatgatgtgttcttttttgaatatagtgtttcttttttagatcgatataatataacactaacaatgttcattttggatatagtataacattgatg 28968848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 19878980 - 19878897
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    ||||||||||||||||| ||| |||||| || |||||||||||||||||||| |||| |||||||||  |||||||||||||||    
T  19878980 agtactgatgtgttctttttttgatataatgtttcttttttggatcgatataatatatcactaacaatattccttttggatata 19878897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 45057179 - 45057088
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||| |||||||||| |||||||||| ||||| |||||||||||||||||||| | ||||||||| ||| |||||| ||||||| |||||    
T  45057179 agtactaatgtgttcttttttggatataatgcttattttttggatcgatatagtacaacactaacaatgtttcttttgtatatagtatagca 45057088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 475
Target Start/End: Complemental strand, 42464425 - 42464359
Alignment:
Q  409 atagtgtagcattgatgtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||||||||||||    
T  42464425 atagtgtagcattgttgtataacactgatgatgctctttttggtatatattgcgtatgtaattgact 42464359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 19349480 - 19349419
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  19349480 tatagtgcttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagt 19349419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 412
Target Start/End: Complemental strand, 2567147 - 2567063
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatag 412  Q
    ||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||| |||  |||| |||| ||||||||||||    
T  2567147 agtactgatgtgttcttttttcgatatagtgcttcctttttagatcgatatagtataacacatacaatgttctttttggatatag 2567063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 2567269 - 2567205
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || |||| |||||| |||||    
T  2567269 aattgagttagtagagttgtctttggatgaaccagatttggaagttggtttgtatcttgttgatg 2567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 21006363 - 21006299
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||| || ||| |||||    
T  21006363 aattgagttagtagagttgtctttggatgaaccagatttggaagctggtttgtatattgttgatg 21006299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 21157607 - 21157540
Alignment:
Q  329 agtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    |||| |||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  21157607 agtattgatgtgttctttttttggatatagtgcttctttttttgattgatatagtatagcactaacaa 21157540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 22289603 - 22289536
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||||    
T  22289603 tttgggtatagtgcttcttttttggatcgatatagtacaacactaacaatgtttcttttggatatagt 22289536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 7899596 - 7899512
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||| |||  |||||||||||||  ||||||||||||||||||||||||| ||| ||| ||||||||| ||||    
T  7899596 agtactgatgtgttctttttta-atatagtgcttctcgtttggatcgatatagtatagcactagcaatgtttcttttggatgtagt 7899512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 42229906 - 42229967
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| ||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  42229906 tatattgcttcttttttgaatcgatatagtatagcactaacaatattccttttggatatagt 42229967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 48333212 - 48333265
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  48333212 ttcttttttggatcgatatagtatagcactaacaatattccttttggatatagt 48333265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 48334155 - 48334208
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  48334155 ttcttttttggatcgatatagtatagcactaacaatgttctttttggatatagt 48334208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 52684445 - 52684509
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| | |||| |||||| |||||    
T  52684445 aattgagttagtagagttgtctttggatgaaccaaatttggaagcagttttgtatcttgttgatg 52684509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 38888964 - 38888897
Alignment:
Q  329 agtactgatgtgtt-cttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||||| |||||| ||| |||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  38888964 agtactggtgtgtttcttttttggatatagtgcttattttttggattgataaagtatagcactaacaa 38888897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 29916034 - 29916095
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||| |||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  29916034 tatagtgcttctgttttagatcgatatagtataacactaacaatgttcattttggatatagt 29916095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 29965187 - 29965248
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||| |||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  29965187 tatagtgcttctgttttagatcgatatagtataacactaacaatgttcattttggatatagt 29965248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 50523026 - 50522966
Alignment:
Q  199 atgcgcatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaacc 259  Q
    |||||||||| |||||||||| |||||||||||| ||||| ||||| ||||| ||||||||    
T  50523026 atgcgcatgacccgcttgatgttgttggaattgaattagctgagttatctttagatgaacc 50522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 50523096 - 50523024
Alignment:
Q  46 gtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaa-ggatagaagatttggtttatg 117  Q
    |||||| ||||||||| |||| ||| |||||||| |||||||||||||||| || | ||||||||||||||||    
T  50523096 gtacttactcttttattcattatttcaaaagaaataaaatggatccaaaaaggggttgaagatttggtttatg 50523024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 39664657 - 39664724
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||||||| || ||||||||||| |||| |||| ||| |||||||||||||| |||||    
T  39664657 tatagtgcttcttttttgtattgatatagtataacactgacaatgtttcttttggatatagtatagca 39664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 21006157 - 21006107
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  21006157 gtatagcaccgatggtgctctttttggtatatattgtgtatgtaattgact 21006107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 983426 - 983479
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagt 382  Q
    |||||| |||||||||| ||||||||||||| |||||||||| || ||||||||    
T  983426 agtacttatgtgttcttttttggatatagtgtttcttttttgaatggatatagt 983479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 212746 - 212802
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtata 385  Q
    |||| |||||||||||| |||||||| | |||||||||||| |||||||| ||||||    
T  212746 agtattgatgtgttcttttttggataaaatgcttctttttttgatcgataaagtata 212802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 475
Target Start/End: Complemental strand, 2567061 - 2567013
Alignment:
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  2567061 atagcaccgatggtgctctttttggtatatattgtgtatgtaattgact 2567013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 419
Target Start/End: Original strand, 25701046 - 25701094
Alignment:
Q  372 atcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||    
T  25701046 atcgatatagtataacactaacaatgttccttttggatatagtatagca 25701094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 412
Target Start/End: Original strand, 28548296 - 28548348
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatag 412  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||    
T  28548296 ttcttttttggatcgatatagcatagcactaacaatgttctttttgaatatag 28548348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 55268894 - 55268850
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggat 373  Q
    |||||||||||||| || |||||||||||| ||||||||||||||    
T  55268894 agtactgatgtgttattttttggatatagttcttcttttttggat 55268850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 475
Target Start/End: Original strand, 52684662 - 52684701
Alignment:
Q  436 atggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  52684662 atggtgctctttttggtatatattgtgtatgtaattgact 52684701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 45057095 - 45057045
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||||  ||||||||||||| | |||||||| ||||||||||||||    
T  45057095 gtatagcactgctggtgctctttttaggatatattgtgtatgtaattgact 45057045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 45347540 - 45347596
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggata 409  Q
    |||||||||| |||||||||||||||||||||||| || |||| ||| ||||||||||    
T  45347540 tatagtgctt-ttttttggatcgatatagtatagcccttacaatgtttcttttggata 45347596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 473
Target Start/End: Original strand, 983494 - 983542
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattga 473  Q
    |||||||||| ||||||||||||||   |||||||| ||||||||||||    
T  983494 gtatagcactgatggtgctctttttatgatatattgtgtatgtaattga 983542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 16 - 291
Target Start/End: Complemental strand, 4170215 - 4169940
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4170215 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 4170116  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4170115 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattcgtggagatgcgcatgaaccgctt 4170016  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4170015 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgtatcttgatgatg 4169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 6497365 - 6497068
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6497365 gttcttcctcatgttgtgagagaaattggagtactttttcttttatccattctttgaaaataaacaaaatggatccaaaaagggtagaagatttggttta 6497266  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  6497265 tgtgcatactaatcttcaactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgtgcatgaaccgctt 6497166  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| || |||| ||||||||    
T  6497165 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaggagaggagatgta 6497068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 40308531 - 40308234
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    |||||||||||  |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  40308531 gttcttcctcctcttgtgagagaaatttgagtactttctcttctatccattctttgaaaagaaacaaaatggatccaaaaagggtataagatttggttta 40308432  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40308431 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 40308332  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  40308331 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 40308234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 22484692 - 22484989
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  22484692 gttcttcctcctgttgtgagtgaaatttgagtactttctcttttatccattcttttaaaagaaacaaaatggatccaaaaggggtagaagatttggttta 22484791  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  22484792 tgtgcatattaatcttcgactattgtcaaggaaagaagatcgatataagaaaggacaatcaagaatgtgggacattagtggagatgcttatgaaccgctt 22484891  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  22484892 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 22484989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 38602083 - 38601860
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38602083 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 38601984  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  38601983 tgtgcatattaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcgagaatgtgggacattggtggagatgcgtatgaaccgctt 38601884  T
Q  216 gatggtgttggaattgagttagca 239  Q
    ||||||||||||||||||||||||    
T  38601883 gatggtgttggaattgagttagca 38601860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 6124612 - 6124887
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  6124612 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaaaatttgg-tta 6124710  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||                     |||||| |||    
T  6124711 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtg---------------------tgaaccactt 6124789  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  6124790 gatgatgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 6124887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 6497039 - 6496892
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6497039 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtataggactaacaagttccttttggatatagtgtagcattgatgt 6496940  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||| || ||||||| ||||||||||||| |||||||||||||||    
T  6496939 ataacactgatagtgctct-ttttgtatatatttcgtatgtaattgact 6496892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 40308205 - 40308056
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40308205 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 40308106  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| || | ||| |||||||||  |||||||||| ||||||||||||||    
T  40308105 tataacattgatgatgctcttttcggtatatattgagtatgtaattgact 40308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 22485018 - 22485167
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22485018 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 22485117  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    | || |  | ||| |||||||||| |||||||||| ||||||||||||||    
T  22485118 tttatctttgatgttgctctttttggtatatattgtgtatgtaattgact 22485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 4169889 - 4169741
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| ||    
T  4169889 ttagtactgatgtgttctttttttggatataatgcttcatttttggatcgatatagtataacactaacaagttcctttttgatatagtttagcattggtg 4169790  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  4169789 tatagcactgatggtgctct-ttttgtacatattgcgtatgtaattgact 4169741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 7807224 - 7807079
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  7807224 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaaattccttttgaatatagtgtagcattgatg 7807125  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| || |  ||||||||||||| |||||||||||||||||||||    
T  7807124 tataacattgctggtgctctttttggtatatattgcgtatgtaatt 7807079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 347 - 475
Target Start/End: Original strand, 6124943 - 6125071
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||  |||||||||||    
T  6124943 tttggatatagtgattcttttttggatcgatatagtataacactaacaagttctttttatatatagtgtagcattgatgtatagcaccgatggtgctctt 6125042  T
Q  447 ttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||||||||||||||||||||||||    
T  6125043 tttggtatatattgcgtatgtaattgact 6125071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 33325178 - 33325278
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33325178 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 33325277  T
Q  116 t 116  Q
    |    
T  33325278 t 33325278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 12819572 - 12819700
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||  |||| ||||  ||||||||    
T  12819572 ctttggatatagtgcttcttttttggatcgatatagtatagcattaacaatattccttttggatatagtatagcattga--tataacactggtggtgctc 12819669  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| || |||||||||||||||    
T  12819670 tttttggtatattttacgtatgtaattgact 12819700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 20537094 - 20537226
Alignment:
Q  346 ctttggatatagtgcttctttttt--ggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgc 442  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||| || ||||    
T  20537094 ctttggatatagtgctttttttttttggatcgatatagtatagcactaacaatgttccttttggatatagtataacattgatgtataacactgattgtgc 20537193  T
Q  443 tcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||  ||||| |||| |||||||||||||    
T  20537194 tctttttgatatattttgcttatgtaattgact 20537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 5371332 - 5371460
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   ||||||| |  |||| |||| |||||| |     
T  5371332 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatataaaatagcattca--tataacactgatggtgttt 5371429  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  5371430 tttttggtatattttgcgtatgtaattgact 5371460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 31236064 - 31235967
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  31236064 agtactgatgtgtttttttttggatatagtgcttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtatatcattgatg 31235967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 18301352 - 18301473
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| | || |||||||||         |||||||||    
T  18301352 ctttggatacagtgcttcttttttggatcgatataatatagcactagcaatgttccttttggatataatataacattgatgt---------atggtgctc 18301442  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  18301443 tttttggtatattttgcgtatgtaattgact 18301473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 45159054 - 45158963
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| || |||| ||||||||||||| |||||    
T  45159054 agtacttatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtatagcactaaaaatgttctttttggatatagtatagca 45158963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 2319535 - 2319600
Alignment:
Q  349 tggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  2319535 tggatatagtgcttcttttttggattgatatagtataacactaacaatgttccttttggatatagt 2319600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 34146420 - 34146517
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaaca-agttccttttggatatagtgtagcattgatg 425  Q
    |||| |||| ||||||| |||||||||| ||||| |||||| ||| ||||||||||||||||||||  |||||||||||||||||| || ||||||||    
T  34146420 agtattgatttgttcttttttggatataatgcttattttttagattgatatagtatagcactaacagtgttccttttggatatagtataacattgatg 34146517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 475
Target Start/End: Original strand, 14824381 - 14824491
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctcttttttg 451  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||             |||||||| |||||||||||||| |    
T  14824381 tataatgcttcttttttggatcgatatagtatagcactaacaatgttctttttggatatagt-------------atagcacttatggtgctctttttgg 14824467  T
Q  452 tatatattgcgtatgtaattgact 475  Q
     |||||||| ||||||||||||||    
T  14824468 gatatattgtgtatgtaattgact 14824491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 419
Target Start/End: Original strand, 4355555 - 4355621
Alignment:
Q  354 atagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||    
T  4355555 atagtgcttcttttttggatcgatatagtataacactaacaatgtttcttttggatatagtatagca 4355621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 4562031 - 4562092
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  4562031 tatagtgcttcttttttggattgatatagtatatcactaacaatgttccttttggatatagt 4562092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 35342560 - 35342640
Alignment:
Q  331 tactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    ||||||||||||||| |||  |||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  35342560 tactgatgtgttctttttta-atatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatata 35342640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 10573734 - 10573798
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaac 393  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||    
T  10573734 agtagtgatgtgttcttttttggatatagtgcttattttttggatcgataaagtataacactaac 10573798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 475
Target Start/End: Original strand, 1005754 - 1005864
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaag-ttccttttggatatagtgtagcattgatgtatagcactaatggtgctcttttttg 451  Q
    ||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||||||             |||||||| |||||||||||||| |    
T  1005754 tatagtgtttcttttttggatcgatatagtataacactaacaatattccttttggatatagt-------------atagcacttatggtgctctttttag 1005840  T
Q  452 tatatattgcgtatgtaattgact 475  Q
     |||||||| ||||||||||||||    
T  1005841 gatatattgtgtatgtaattgact 1005864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 3545458 - 3545374
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||| |||||||||||||||| ||| ||  ||||||||||||||||||||| ||  || ||||||||||||||    
T  3545458 agtactgatgtgttcttttttggatatagtgctt-tttattttatcgatatagtatagcactaataatatttcttttggatatagt 3545374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 24585777 - 24585845
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa--gttccttttggatatagtgtagca 419  Q
    ||||||| |||||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||    
T  24585777 tatagtgattcttttttggatcgatatagtatagcactaacaatgtttctttttggatatagtatagca 24585845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 352 - 419
Target Start/End: Complemental strand, 28746538 - 28746470
Alignment:
Q  352 atatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||| |||||||||||||||||||||||||| || |||||| ||| |||||||||||||| |||||    
T  28746538 atatagttcttcttttttggatcgatatagtataacaataacaatgtttcttttggatatagtatagca 28746470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 45159176 - 45159112
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| || |||| |||||| |||||    
T  45159176 aattgagttagtagaattgtctttggatgaaccagatttggaagttggtttgtatcttgttgatg 45159112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 8482793 - 8482726
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||| ||||||||||||||||||||||| |||| || |||||| |||||||||||||||||| |||||    
T  8482793 tataatgcttcttttttggatcgatataatataacattaacaatgttccttttggatatagtatagca 8482726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 21104741 - 21104803
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggat 408  Q
    |||| |||||||||||| |||||| |||||||||||||| |||||||||  ||||||||||||    
T  21104741 tttgaatatagtgcttcatttttgtatcgatatagtatatcactaacaatattccttttggat 21104803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 45158970 - 45158920
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  45158970 gtatagcaccgatggtgctctttttggtatatattgtgtatgtaattgact 45158920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 40431897 - 40431837
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||| |||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  40431897 tatagtgctccttttttt-atcgatatagtataacactaacaatgttccttttggatatagt 40431837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 44156840 - 44156901
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||| ||| ||||||||||    
T  44156840 tataatgcttcttttttggatcgatataatatagaactaacaatgtttcttctggatatagt 44156901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Original strand, 5588280 - 5588322
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    |||||||||| ||||||||||||||||| |||| |||||||||    
T  5588280 tatagtgcttattttttggatcgatataatataacactaacaa 5588322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 1776312 - 1776252
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||||||||||||| | ||||||  |||| ||| ||||||||||||||    
T  1776312 tatagtgcttcttttttggatcgatataat-tagcacggacaatgtttcttttggatatagt 1776252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 27479 - 27182
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27479 gttcttcctcatgttgtgagagaaattggagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 27380  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27379 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 27280  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |||||||||||| |||| || |||| ||||||||    
T  27279 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttgaaagataatttgtatcttgatgatgggaatggaggagaggagatgta 27182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 327 - 388
Target Start/End: Complemental strand, 27153 - 27092
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagca 388  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  27153 ttagtactgatgtgttcttttttggatatggtgcttcttttttggatcgatatagtatagca 27092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 11830113 - 11830410
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11830113 gttcttcctcatgttgtgagagaaattggagtactttctcatttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 11830212  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    | || |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11830213 tatgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 11830312  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| || |||| ||||||||    
T  11830313 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttgaaagctgatttgtatcttgatgatgggaatggaggagaggagatgta 11830410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 27397810 - 27397513
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  27397810 gttcttcctcatgttgtgagagaaattggagtactttctcttttatccattcttagaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 27397711  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  27397710 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattggtggagatgcgcatgaaccgctt 27397611  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||| |||| || |||| ||||||||    
T  27397610 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttgaaagctaatttgtatcttgatgatgggaatggaggagaggagatgta 27397513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 40096082 - 40096379
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40096082 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 40096181  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  40096182 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 40096281  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  40096282 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 40096379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 36660891 - 36661186
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    |||||||||||  |||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||     
T  36660891 gttcttcctcctattgtgagagaaattggagtactttctcttttatccattctttgaaaagaaagaaaatggatccaaaaatggtagaagatttggtttg 36660990  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  36660991 tgtgcatactaatcttcgactcttgtcaaggaaagaa--tgaatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgttt 36661088  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||  | |||| ||||||||    
T  36661089 gatggtgttggaattgagttagaagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatgcaggagaggagatgta 36661186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 39521195 - 39521402
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  39521195 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatctattctttgaaaagaaacaaaatagatccaaaaagggtagaagatttggttta 39521294  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39521295 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 39521394  T
Q  216 gatggtgt 223  Q
    ||| ||||    
T  39521395 gatagtgt 39521402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 36661215 - 36661363
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  36661215 ttagtactgatgtgttcttttttggatacagtgcttcttttttggatcgataaagtataacactaacaagttccttttggatatagtgtagcattgatgt 36661314  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  36661315 atagcactgatggtgctctttttggtatatattacgtatgtaattgact 36661363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 327 - 474
Target Start/End: Original strand, 11830439 - 11830585
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11830439 ttagtactgacgtgttcttttttggatataatgcttcttttttggatcgatatagtatagcactaacaagttccttttggatataatgtagcattgatgt 11830538  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgac 474  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  11830539 atagcactgatggtgctc-tttttgtatatattgcgtatgtaattgac 11830585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 327 - 471
Target Start/End: Original strand, 48163678 - 48163823
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48163678 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 48163777  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  48163778 tataacactgctggtgctctttttggtatatattgcgtatgtaatt 48163823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 27555214 - 27555069
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27555214 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatg 27555115  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  27555114 tataacactgctggtgctctttttggtatatattgcgtatgtaatt 27555069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 27397484 - 27397338
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  27397484 ttagtactgatgttttttt-tttggatataatgcttcttttttggatcgatatattatagcactaacaagttccttttgaatatagtgtagcattgatgt 27397386  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  27397385 atagcactgatggtgctct-ttttgtatatattgcgtatgtaattgact 27397338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 327 - 471
Target Start/End: Original strand, 16851053 - 16851198
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  16851053 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagtttcttttggatatagtgtagcattgatg 16851152  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    ||||  |||  ||||||||||||| |||||||||||||||||||||    
T  16851153 tataatactgctggtgctctttttggtatatattgcgtatgtaatt 16851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 327 - 471
Target Start/End: Original strand, 27354191 - 27354336
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27354191 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatataatatagcactaacaagttccttttggatatagtgtagcattgatg 27354290  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  |||||||||||||  ||||| ||||||||||||||    
T  27354291 tataacactgctggtgctctttttgatatatgttgcgtatgtaatt 27354336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 26773442 - 26773312
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  26773442 ctttggatataatgcttcttttttggatcgatatagtatagcactaacaatgttccgtttggatatagtatagcattgatgtataacactaatggtgctc 26773343  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  26773342 tttttggtatattttgcgtatgtaattgact 26773312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 40096408 - 40096560
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  40096408 ttagtactgatgtgttctttttttggatatagtgatttttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 40096507  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  40096508 tataacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 40096560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 328 - 475
Target Start/End: Complemental strand, 47238117 - 47237970
Alignment:
Q  328 tagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgt 426  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||| |||| ||||||||||||    
T  47238117 tagtactgatgtgttcttttttggatatagtgcttcttttttgaatcgatatagtatagcattaacaatgtcccttttggatgtagt-tagcattgatgt 47238019  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||  ||||||||||||| |||||| ||||||||||||||||||    
T  47238018 atagcactggtggtgctctttttggtatattttgcgtatgtaattgact 47237970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 1042929 - 1042799
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | ||||||||||||||| |||| |||||||||    
T  1042929 ctttggatatagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatataatatagcattgatgtataacactgatggtgctc 1042830  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  1042829 tttttggtatattttgcgtatgtaattgact 1042799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 16564102 - 16563974
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| |||||  |||| |||| |||||||||    
T  16564102 ctttggatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagtattga--tataacactgatggtgctc 16564005  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  16564004 tttttggtatattttgcgtatgtaattgact 16563974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 16601560 - 16601688
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| |||||  |||| |||| |||||||||    
T  16601560 ctttggatatagtgcttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagtattga--tataacactgatggtgctc 16601657  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  16601658 tttttggtatattttgcgtatgtaattgact 16601688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 38265122 - 38265220
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttt 114  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38265122 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttt 38265220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 8029066 - 8029196
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||| ||||| |||||||| ||||||||||||||| |||| |||||||||    
T  8029066 ctttggatatagtacttcttttttgaatcgatatactatagcactaacaatgtttcttttagatatagtatagcattgatgtataacactgatggtgctc 8029165  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| |||||||||||| |||||    
T  8029166 tttttggtatattttgcgtatgtaagtgact 8029196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 11058542 - 11058632
Alignment:
Q  206 tgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaat 296  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||    
T  11058542 tgaatcgcttgatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaat 11058632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 23078987 - 23078890
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  23078987 agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttcctttttgatatagtatagcactgatg 23078890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 4291928 - 4292055
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||| |||||||||||||| |||||||||||||||| || |||||| |||||||||||||||||| ||||||||||  ||| |||| ||| |||||    
T  4291928 ctttggatgtagtgcttcttttt-ggatcgatatagtataacattaacaatgttccttttggatatagtatagcattgat--ataacactgatgatgctc 4292024  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  4292025 tttttggtatattttgcgtatgtaattgact 4292055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 19510882 - 19511003
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||| ||| |||||||||||||||||| || |||||||||         |||||||||    
T  19510882 ctttggatatagtgcttctttcttggatcgatataatataacactagcaatgttccttttggatatagtataacattgatgt---------atggtgctc 19510972  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||| ||| ||||||||||||||    
T  19510973 ttttttgtatattttgagtatgtaattgact 19511003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 33454307 - 33454404
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| | ||||| |||||    
T  33454307 agtacttatgtgttcttttatggatatagtgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatg 33454404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 23970002 - 23969935
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23970002 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagca 23969935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 48153784 - 48153851
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  48153784 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagca 48153851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 1400146 - 1400049
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||| ||||||||| || |||| |||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  1400146 agtattgatgtgttattttttgaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagtataacattgatg 1400049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 25557636 - 25557721
Alignment:
Q  32 tgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatg 117  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||   ||||||||||||||||    
T  25557636 tgagagaaattggagtacttactcttttattcattctttgaaaagaaataaaatggatccaaaaagggctgaagatttggtttatg 25557721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 19820858 - 19820791
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  19820858 tttggatatagtgcttctttttcgaatcgatatagtatagcactaacaatgttccttttggatatagt 19820791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 26973296 - 26973357
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  26973296 tatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagt 26973357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 409 - 473
Target Start/End: Original strand, 39521396 - 39521460
Alignment:
Q  409 atagtgtagcattgatgtatagcactaatggtgctcttttttgtatatattgcgtatgtaattga 473  Q
    ||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||    
T  39521396 atagtgtagcattgatgtataacagtgatgatgctcttttttgtatatattgcgtatgtaattga 39521460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 475
Target Start/End: Original strand, 35160101 - 35160237
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaa----caa-gttccttttggatatagtgtagcattga 423  Q
    ||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||    ||| ||||||||||||||||||              
T  35160101 agtactgatgtgttcttttttagata--gtgcttcttttttggatcgatatagtatagcactaattaacaatgttccttttggatatagt---------- 35160188  T
Q  424 tgtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
       ||||||||||||||||| ||||| | |||||||| ||||||||||||||    
T  35160189 ---atagcactaatggtgctttttttgggatatattgtgtatgtaattgact 35160237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 15878302 - 15878217
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| |||||||||||| |||  |||||||| ||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||    
T  15878302 agtattgatgtgttctttttttaatatagtgtttcttttttagatcgatatagtataacactaacaatgttcattttggatatagt 15878217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 36763674 - 36763572
Alignment:
Q  329 agtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaa----caa-gttccttttggatatagtgtagcattg 422  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||| ||||||    ||| |||||||||||||||||| ||||| ||    
T  36763674 agtactgatgtgtcctttttttggatatagtgcctcttttttggatcgatatagtataacactaattaacaatgttccttttggatatagtatagcactg 36763575  T
Q  423 atg 425  Q
    |||    
T  36763574 atg 36763572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 36757894 - 36757793
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcac----taacaa-gttccttttggatatagtgtagcattga 423  Q
    |||||||||||||  || |||| ||||||||||| |||||||||||||||||||||| |||    |||||| |||||||||||||||||| ||||| |||    
T  36757894 agtactgatgtgtcattttttgtatatagtgcttattttttggatcgatatagtataacactgattaacaatgttccttttggatatagtatagcactga 36757795  T
Q  424 tg 425  Q
    ||    
T  36757794 tg 36757793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 36767418 - 36767317
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcac----taacaa-gttccttttggatatagtgtagcattga 423  Q
    |||||||||||||  || |||| ||||||||||| |||||||||||||||||||||| |||    |||||| |||||||||||||||||| ||||| |||    
T  36767418 agtactgatgtgtcattttttgtatatagtgcttattttttggatcgatatagtataacactgattaacaatgttccttttggatatagtatagcactga 36767319  T
Q  424 tg 425  Q
    ||    
T  36767318 tg 36767317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 475
Target Start/End: Original strand, 38064927 - 38065041
Alignment:
Q  349 tggatatagtgcttctttttt-ggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||             ||||||||| ||||||||||    
T  38064927 tggatatagtgcttctttttttggatcgatataatataacactaacaatgttccttttggatatagt-------------atagcacta-tggtgctctt 38065012  T
Q  447 ttttgtatatattgcgtatgtaattgact 475  Q
    ||| | |||||||||||||||||||||||    
T  38065013 tttgggatatattgcgtatgtaattgact 38065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 9283856 - 9283797
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  9283856 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatg 9283797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 21409629 - 21409696
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||||    
T  21409629 tataatgcttcttttttggatcgatatagtatagcactaacaatatttcttttggatatagtatagca 21409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 25969627 - 25969686
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  25969627 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatg 25969686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 9283732 - 9283654
Alignment:
Q  336 atgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||| |||| ||||| |||||||    
T  9283732 atgtgttctttttttgatatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagt 9283654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 413
Target Start/End: Original strand, 25969751 - 25969829
Alignment:
Q  336 atgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||| |||| ||||| |||||||    
T  25969751 atgtgttctttttttgatatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagt 25969829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 21180073 - 21180122
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgata 378  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  21180073 agtactgatgtgttcttttttggatatagtgcttattttttggatcgata 21180122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 25557719 - 25557788
Alignment:
Q  199 atgcgcatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaaccagatttgga 268  Q
    |||||||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||    
T  25557719 atgcgcatgacccacttgatggtgttggaattgaattagctgagttatctttagatgaaccagagttgga 25557788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 36413609 - 36413669
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  36413609 tatagtgcttcttttttg-atcgatatagtataacactaacaatgttccttttggatatagt 36413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 44269979 - 44270042
Alignment:
Q  351 gatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||| |||||||||||||  |||||||||||||| ||||||||| ||||||||||||||||||    
T  44269979 gatatggtgcttcttttttttatcgatatagtataacactaacaatgttccttttggatatagt 44270042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 47720083 - 47720024
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||| |||||| |||||    
T  47720083 agttagtagagttgtctttggatgagccagatttggaagctggtttgtatcttgttgatg 47720024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 554766 - 554724
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  554766 tatagtgcttcttttttggatcgatatagtataacactaacaa 554724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 413
Target Start/End: Complemental strand, 9250176 - 9250104
Alignment:
Q  342 tcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||| |||| ||||| |||||||    
T  9250176 tctttttttgatatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagt 9250104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 9250304 - 9250246
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| ||||||| ||||||||||||||||||||||||||| |||| |||||| |||||    
T  9250304 agttagtagagttg-ctttggatgaaccagatttggaagctggtttgtatcttgttgatg 9250246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 388
Target Start/End: Original strand, 40041615 - 40041675
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttc-ttttttggatcgatatagtatagca 388  Q
    ||||||||||||||||| ||| |||||| |||||| ||||||||||||||| | |||||||    
T  40041615 agtactgatgtgttcttttttagatataatgcttctttttttggatcgataaattatagca 40041675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 11058686 - 11058734
Alignment:
Q  330 gtactgatgtgttcttctttggatatagtgcttcttttttggatcgatata 380  Q
    |||||||||||||||| |||||||||||| ||  |||||||||||||||||    
T  11058686 gtactgatgtgttcttttttggatatagttct--ttttttggatcgatata 11058734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 23969942 - 23969892
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||| |||||||||||||| | ||| |||| ||||||||||||||    
T  23969942 gtatagcacttatggtgctctttttgggataaattgtgtatgtaattgact 23969892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 407
Target Start/End: Original strand, 24956501 - 24956543
Alignment:
Q  366 ttttggatcgatatagtatagcactaacaa-gttccttttgga 407  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  24956501 ttttggatcgatatagtatagcactaacaatgtttcttttgga 24956543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 25969828 - 25969878
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||| ||| |||||||||| |||||||||| ||||||||||||||    
T  25969828 gtatatcactgatgatgctctttttggtatatattgtgtatgtaattgact 25969878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 36763585 - 36763536
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||| |||||||| ||||||| |||||||| ||||||||||||||    
T  36763585 gtatagcactgatggtgct-ttttttggatatattgtgtatgtaattgact 36763536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 475
Target Start/End: Complemental strand, 9250099 - 9250055
Alignment:
Q  431 cactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| ||| |||||||||| |||||||||| ||||||||||||||    
T  9250099 cactgatgatgctctttttggtatatattgtgtatgtaattgact 9250055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 475
Target Start/End: Complemental strand, 9283649 - 9283605
Alignment:
Q  431 cactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| ||| |||||||||| |||||||||| ||||||||||||||    
T  9283649 cactgatgatgctctttttggtatatattgtgtatgtaattgact 9283605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 31226763 - 31227060
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31226763 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatcaattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 31226862  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31226863 tgtgcatattaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 31226962  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  31226963 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 31227060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 53322765 - 53323062
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53322765 gttcttcctcctgctgtgagagaaattggagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 53322864  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| || ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53322865 tgtgcatcctaatcttcgacttttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 53322964  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||| |||| || |||| ||||||||    
T  53322965 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagctaatttgtatcttgatgatgggaatggaggagaggagatgta 53323062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 52572615 - 52572912
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| | ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52572615 gttcttcctcctgatgtaagagaaattagagaactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 52572714  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| |||    
T  52572715 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggaaaatcaagaatgtgggacattagtggagatgcgcatgaacctctt 52572814  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| || ||||  |||||||    
T  52572815 gatggtgttagaattgagttagcagagttgtctttggatgaaccatatttggaagctgatttgtatcttgatgatgggaatggaggagagtagatgta 52572912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 8063790 - 8063493
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8063790 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 8063691  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  8063690 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 8063591  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  8063590 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 8063493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 313
Target Start/End: Complemental strand, 3403263 - 3402970
Alignment:
Q  20 ttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatgtg 119  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3403263 ttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggtttatgtg 3403164  T
Q  120 gatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatg 219  Q
     ||| |||||||||||| | |||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403163 catattaatcttcgactatagtcaaggaaagaaggtggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatg 3403064  T
Q  220 gtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  3403063 gtgttggaattgagttagcaaagttgtccttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 3402970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 28 - 313
Target Start/End: Original strand, 41146043 - 41146327
Alignment:
Q  28 gttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatgtggatactaa 127  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  41146043 gttgtgagagaaattggagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaggg-tagaagatttggtttatgtgcatactaa 41146141  T
Q  128 tcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttgga 227  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41146142 tcttcgactcttgtcaaggaaagacgatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaacgcttgatggtgttgga 41146241  T
Q  228 attgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||| |||| || |||| ||||||||    
T  41146242 attgagttagcagagttgtctttggatgatccggatttggaagctgatttgtatcttgattatgggaatggaggagaggagatgta 41146327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 52122632 - 52122363
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52122632 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 52122533  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  52122532 tgtgcatattaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcgagaatgtgggacattggtggagatgcgcatgaaccgctt 52122433  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttg 285  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||| ||||||    
T  52122432 gatggtgttggaattgagttagcatagttgtctttgaatgaaccggattaggaagctgatttgtatcttg 52122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 296
Target Start/End: Original strand, 14795432 - 14795712
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  14795432 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccagtctttaaaaagaaacaaaatggatccaaaaagggtagaaaatttggttta 14795531  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  14795532 tgtgcatattaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggatattagtggagatgcgcatgaaccgctt 14795631  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaat 296  Q
    |||| | ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||    
T  14795632 gatgatattggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaat 14795712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 41146356 - 41146503
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41146356 ttagtactgatgtgttcttttttggatatagtgcttcttttttgaatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatgt 41146455  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  41146456 atagcactgatggtgctc-tttttgtatatattgcgtatgtaattgact 41146503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 53323091 - 53323239
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53323091 ttagtactgatgtgttcttttttggatacagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 53323190  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| ||| |||||||||| |||||||||| ||||||||||||||    
T  53323191 atagcactgatgatgctctttttggtatatattgtgtatgtaattgact 53323239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 52572941 - 52573085
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52572941 ttagtactgatgtgttcttttttggatatagtgctt----tttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 52573036  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  52573037 atagcactgatggtgctctttttggtatatactgcgtatgtaattgact 52573085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 3402941 - 3402792
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3402941 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttccttttggatatagtgtagcattgatg 3402842  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| || ||||||||||| |||||||||||||||||||||||||    
T  3402841 tataacacttattgtgctctttttggtatatattgcgtatgtaattgact 3402792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 14795758 - 14795907
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    |||||| |||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14795758 ttagtattgatgtgttctttttttggatatagtgattctttttcggatcgatatagtatagcactaacaagttccttttggatacagtgtagcattgatg 14795857  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  14795858 tatagcactgatggtgctctttttgatatatattgcgtatgtaattgact 14795907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 8063464 - 8063312
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8063464 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 8063365  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  8063364 tataacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 8063312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 352 - 475
Target Start/End: Original strand, 31227117 - 31227240
Alignment:
Q  352 atatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctcttttttg 451  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |    
T  31227117 atatagtaattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactcatgatgctctttttgg 31227216  T
Q  452 tatatattgcgtatgtaattgact 475  Q
    ||| ||||||| ||||||||||||    
T  31227217 tatgtattgcgcatgtaattgact 31227240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 28377267 - 28377397
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||| |||| |||||||||    
T  28377267 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttctttttggatataatatagcattgatgtataacactgatggtgctc 28377366  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    |||||  ||||| ||||||||||||||||||    
T  28377367 tttttgttatattttgcgtatgtaattgact 28377397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 38492129 - 38491991
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    |||||| |||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38492129 ttagtaatgatgtgttctttttttggatatagggattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 38492030  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||        ||||||||||||| |||||||||||||||||||||    
T  38492029 tat-------ctggtgctctttttggtatatattgcgtatgtaatt 38491991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 372 - 475
Target Start/End: Complemental strand, 5325340 - 5325237
Alignment:
Q  372 atcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  5325340 atcgatatagcataacactaacaagttccttttggatataatgtagcattgatgtatagcacttatggtgctctttttggtatatattgcgtatgtaatt 5325241  T
Q  472 gact 475  Q
    ||||    
T  5325240 gact 5325237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 5835200 - 5835328
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||| || ||||||  |||| || | |||||||||    
T  5835200 ctttggatatagtgcttctttttttgatcgatatagtatagcattaacaatgttccttttggatatagtataacattga--tataacattgatggtgctc 5835297  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    |||||  ||||| ||||||||||||||||||    
T  5835298 tttttgatatattttgcgtatgtaattgact 5835328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 52721594 - 52721691
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||| || ||||||||    
T  52721594 agtactgatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtataacactaacaatgttctttttgaatatagtatatcattgatg 52721691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 55901026 - 55900929
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| | ||||| |||||    
T  55901026 agtactgatgtgttcttttatggatataatgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatg 55900929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 24784612 - 24784703
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||| ||| |||| ||||||||||||| |||||    
T  24784612 agtactgatgtgttcttttttcgatatagtgcttcttttttagattgatatagtatagcactatcaatgttctttttggatatagtatagca 24784703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 24823654 - 24823563
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||| ||| |||| ||||||||||||| |||||    
T  24823654 agtactgatgtgttcttttttcgatatagtgcttcttttttagattgatatagtatagcactatcaatgttctttttggatatagtatagca 24823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 413
Target Start/End: Original strand, 39957930 - 39958013
Alignment:
Q  331 tactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||||||    
T  39957930 tactgatgtgttcttttttcgatatagtgcttcttttttagatcgatatagtatagcactaacaatgttctttttagatatagt 39958013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 44521924 - 44521833
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||| |||||||||| |||| ||||| |||||||||||||||||||||||||||| || |||||| |||||||||||||||||| |||||    
T  44521924 agtactaatgtgttcttttttgaatataatgcttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtatagca 44521833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 43509780 - 43509656
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||| ||||||||||||||||    ||||||||||| |||||| ||||||||| |||||| | ||||||||||  |||  ||| |||||||||    
T  43509780 ctttggatataatgcttcttttttggat----atagtatagcattaacaatgttccttttagatataatatagcattgat--ataatactgatggtgctc 43509687  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  43509686 tttttggtatattttgcgtatgtaattgact 43509656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 3109183 - 3109098
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||| || |||| |||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  3109183 agtactgatgtgttattttttgaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagt 3109098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 329 - 413
Target Start/End: Complemental strand, 24793609 - 24793524
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||| |||  |||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  24793609 agtactgatgtgttcttttttaaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatatagt 24793524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 17892488 - 17892573
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||| ||||||||||| ||||||||| |||||||||| |||||||    
T  17892488 agtactgatgtgttcttttttgaatatagtgtttcttttttagattgatatagtataacactaacaatgttccttttgaatatagt 17892573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 36943909 - 36943994
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| |||||||||||| |||| |||||||| ||||||||| |||||||||||||||  |||||||| ||||||||||||||||||    
T  36943909 agtagtgatgtgttcttttttgaatatagtgtttcttttttagatcgatatagtataatactaacaatgttccttttggatatagt 36943994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 54433562 - 54433647
Alignment:
Q  32 tgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatg 117  Q
    ||||| ||||| | |||||| |||||||||  |||||||||||||||| |||||||||||||||||| | |||||| |||||||||    
T  54433562 tgagaaaaattggagtacttactcttttatttattctttgaaaagaaataaaatggatccaaaaagggttgaagatgtggtttatg 54433647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 24784490 - 24784554
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  24784490 aattgagttagtaaagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatg 24784554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 1177219 - 1177286
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||    
T  1177219 tataatgcttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagtatagca 1177286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 31946102 - 31946036
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||| |||||    
T  31946102 tatagtgcttcttttttggatcgatat-gtatagcactaacaatgttccttttagatatagtatagca 31946036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 36511809 - 36511742
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||| |||||||||||||| |||||    
T  36511809 tatagtgcttcttttttggatcgatataatatagcactaagaatgtttcttttggatatagtatagca 36511742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 51859042 - 51859104
Alignment:
Q  358 tgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||||    
T  51859042 tgcttcttttttggatcgatatagtataacactaacaatgtttcttttggatatagtatagca 51859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 46431811 - 46431748
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaac 393  Q
    ||||||||||||||||| |||||||||| | |||| |||||||||||||| ||||||||||||||    
T  46431811 agtactgatgtgttcttttttggatatactacttc-tttttggatcgataaagtatagcactaac 46431748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 409
Target Start/End: Complemental strand, 42630338 - 42630275
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggata 409  Q
    |||||||||| ||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||    
T  42630338 tttggatataatgcttcttttttgaatcgatgtagtataacactaacaatgttccttttggata 42630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 52721477 - 52721536
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||| |||||| |||||    
T  52721477 agttagtagagttgtctttggatgaaccagatttgaaagctggtttgtatcttgttgatg 52721536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 5325396 - 5325343
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctt 69  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||||    
T  5325396 gttcttcctcatgttgtgagagaaatttgagtactttctcttttatccattctt 5325343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 39957818 - 39957870
Alignment:
Q  239 agagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||| |||||    
T  39957818 agagttgtctttggatgaaccagatttggaagctagtttgtatcttgttgatg 39957870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 411
Target Start/End: Original strand, 40694312 - 40694371
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    |||| ||||||||||||| ||||||||||||||| |||||||| ||| ||||||||||||    
T  40694312 tataatgcttcttttttgaatcgatatagtatagtactaacaatgtttcttttggatata 40694371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 475
Target Start/End: Original strand, 47607343 - 47607453
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctcttttttg 451  Q
    |||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||||||||||||||             |||||||| |||||||||||||| |    
T  47607343 tataatgctttttttttggatcgatataatatagcaccaacaatgtttcttttggatatagt-------------atagcacttatggtgctctttttgg 47607429  T
Q  452 tatatattgcgtatgtaattgact 475  Q
     |||||||| ||||||||||||||    
T  47607430 gatatattgtgtatgtaattgact 47607453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 31946043 - 31945993
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||| |||||||||||||| | |||||||| ||||||||||||||    
T  31946043 gtatagcacttatggtgctctttttgggatatattgtgtatgtaattgact 31945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 49470559 - 49470613
Alignment:
Q  372 atcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||||  ||||||||| |||||||||||||||||| |||||||||||    
T  49470559 atcgatatagtatgtcactaacaatgttccttttggatatagtatagcattgatg 49470613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 395
Target Start/End: Original strand, 51675031 - 51675073
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  51675031 tatagtgcttcttttttggatagatatagtatatcactaacaa 51675073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 258941 - 258884
Alignment:
Q  358 tgcttcttttttggatcgatatagtatagcactaacaa-gttcc-ttttggatatagt 413  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||    
T  258941 tgcttcttttttggatcaatatagtatagcagtaacaatgttccgttttggatatagt 258884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 722503 - 722442
Alignment:
Q  334 tgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||||||| || |||| |||||||| ||||||||||||| ||||||||||  |||||||||    
T  722503 tgatgtgttattttttgaatatagtgtttcttttttggatagatatagtatgacactaacaa 722442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 475
Target Start/End: Complemental strand, 37992349 - 37992300
Alignment:
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||||||||||||||| | |||||||| ||||||||| ||||    
T  37992349 tatagcactaatggtgctctttttgggatatattgggtatgtaatcgact 37992300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 475
Target Start/End: Complemental strand, 55900941 - 55900892
Alignment:
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||| ||| |||||||||| |||||||||| ||||||||||||||    
T  55900941 tatagcactgatgatgctctttttggtatatattgtgtatgtaattgact 55900892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 2586588 - 2586639
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    ||||||||| ||||||||||||||| || |||||| ||||||||||||||||    
T  2586588 ttcttttttagatcgatatagtataacattaacaatgttccttttggatata 2586639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 754415 - 754465
Alignment:
Q  334 tgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtat 384  Q
    ||||||||| || |||| |||||||| ||||||||||||| ||||||||||    
T  754415 tgatgtgttattttttgaatatagtgtttcttttttggatagatatagtat 754465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 24823570 - 24823520
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||  ||| |||||||||| |||||||||| ||||||||||||||    
T  24823570 gtatagcaccgatgatgctctttttggtatatattgtgtatgtaattgact 24823520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 54433645 - 54433703
Alignment:
Q  199 atgcgcatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaa 257  Q
    |||||||||| | ||||||| ||||||||||||| ||||| ||||| ||||| ||||||    
T  54433645 atgcgcatgacctgcttgattgtgttggaattgaattagctgagttatctttagatgaa 54433703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 7188473 - 7188176
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  7188473 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttaaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 7188374  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7188373 tgtgcatattaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattaatggagatgcgcatgaaccgctt 7188274  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  7188273 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 7188176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 1036509 - 1036212
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1036509 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 1036410  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  1036409 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 1036310  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  1036309 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 1036212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 8357306 - 8357580
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  8357306 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaataaaatagatccaaaaggg-tagaagatttggttta 8357404  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  8357405 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattggtggagatgcgcatgaaccgctt 8357504  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  8357505 gatggtgttggaattgagttagcagagttgtctttggatgaacctgatttggaagcttatttgtatcttgatgatg 8357580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 132 - 296
Target Start/End: Complemental strand, 22989204 - 22989040
Alignment:
Q  132 cgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattg 231  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||| |||| ||||||| |||||||||||||||| ||||||||| |||||||||||    
T  22989204 cgactcttatcaaggaaagaagatggatataagaaaggacaatcaagattgtgtgacattaatggagatgcgcatgaatcgcttgatgatgttggaattg 22989105  T
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaat 296  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||    
T  22989104 agttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgtgaat 22989040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 132 - 296
Target Start/End: Original strand, 23799192 - 23799356
Alignment:
Q  132 cgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattg 231  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||| |||| ||||||| |||||||||||||||| ||||||||| |||||||||||    
T  23799192 cgactcttatcaaggaaagaagatggatataagaaaggacaatcaagattgtgtgacattaatggagatgcgcatgaatcgcttgatgatgttggaattg 23799291  T
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaat 296  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||    
T  23799292 agttagcagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgtgaat 23799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 7188147 - 7188001
Alignment:
Q  327 ttagtactgatgtgttcttcttt--ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgat 424  Q
    ||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7188147 ttagtactgatgtgttcttttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgat 7188048  T
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||    
T  7188047 gtatagcactgatggtgctctttttggtatatattgtgtatgtaatt 7188001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 31195718 - 31195573
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31195718 ttagtactgttgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 31195619  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  31195618 tataacactgctggtgctctttttggtatatattgcgtatgtaatt 31195573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 1036183 - 1036031
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  1036183 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 1036084  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  1036083 tataacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 1036031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 8357631 - 8357779
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttgga-tatagtgtagcattgatg 425  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||| | ||||||||    
T  8357631 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcaatataatatagtactaacaagttccttttggattatagtgcaacattgatg 8357730  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  8357731 tatagtactgatggtgctc-tttttgtatatattgcgtatgtaattgact 8357779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 31740563 - 31740433
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||| |||| || |||||     
T  31740563 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatataatataacattgatgtataacactgattgtgcta 31740464  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||| || |||||    
T  31740463 tttttggtatattttgcgtatgcaaatgact 31740433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 32130406 - 32130278
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| ||| || ||||  | |||| |||| |||||||||    
T  32130406 ctttggatatagtgcttcttttttggatcaatatagtatagcattaacaatgttccttttggataaagtataacatt--tatataacactgatggtgctc 32130309  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  32130308 tttttggtatattttgcgtatgtaattgact 32130278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 10894397 - 10894300
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  10894397 agtattgatgtgttctttgttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcactgatg 10894300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 424
Target Start/End: Original strand, 7255161 - 7255258
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa--gttccttttggatatagtgtagcattgat 424  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||||||||||||| || ||||||  |||||||||||||||||| ||||| ||||    
T  7255161 agtactgatgtgttatttttttgatatagtgcttcttttttggatcgatatagtataacattaacaaatgttccttttggatatagtatagcactgat 7255258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 6707919 - 6707821
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttctt-ttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||| |||||||||||| | |||||||| |||||||| ||||||||| |||||||||| ||||||||| |||| ||||||||||||| |||||||||||    
T  6707919 agtattgatgtgttcttttatggatataatgcttctttttttggatcaatatagtataacactaacaatgttcattttggatatagtatagcattgatg 6707821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 3212809 - 3212894
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||| |||| ||||| |||||||    
T  3212809 agtactgatgtgttctttttttgatatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagt 3212894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 19128395 - 19128456
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  19128395 tatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagt 19128456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 13061252 - 13061189
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaa 392  Q
    |||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13061252 agtattgatgtgttattttttggatatagcgcttcttttttggatcgatatagtatagcactaa 13061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 395
Target Start/End: Original strand, 26327535 - 26327601
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||| |||||||||| |||||||||    
T  26327535 agtaccgatgtgttcttttatggatatagtgcttcttttttggatcaatatagtataacactaacaa 26327601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 234551 - 234612
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  234551 tatagtgcttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagt 234612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 475
Target Start/End: Original strand, 32018343 - 32018470
Alignment:
Q  336 atgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcact 434  Q
    |||||||||| ||| ||||||||| ||||||||| ||| ||||||||||| ||||||||| |||| |||||||||||||             |||||||     
T  32018343 atgtgttcttttttcgatatagtgtttcttttttagattgatatagtataacactaacaatgttctttttggatatagt-------------atagcacc 32018429  T
Q  435 aatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
     |||||||||||||| |||||||||| ||||||||||||||    
T  32018430 gatggtgctctttttggtatatattgtgtatgtaattgact 32018470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 3212692 - 3212751
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  3212692 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatg 3212751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 22988972 - 22988923
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggata 409  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22988972 ttcttttttggatcgatatagtatagcactaacaatgttccttttggata 22988923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 23799424 - 23799473
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggata 409  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23799424 ttcttttttggatcgatatagtatagcactaacaatgttccttttggata 23799473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 27084216 - 27084277
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||| ||||||||||||||| |||||||| |||||||| |||||||||    
T  27084216 tatagtgcttcttttttgaatcgatatagtatagaactaacaatgttcctttcggatatagt 27084277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 32018222 - 32018279
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatctt 284  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||    
T  32018222 aattgagttagtagagttgtctttggatgaaccaaatttggaagctggtttgtatctt 32018279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 31079841 - 31079889
Alignment:
Q  331 tactgatgtgttcttctttggatatagtgcttcttttttggatcgatat 379  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  31079841 tactgatgtgttcttttttggatatagtgtttcttttttggattgatat 31079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 426 - 475
Target Start/End: Original strand, 3299362 - 3299411
Alignment:
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||| |||||||||||||| | |||||||| ||||||||||||||    
T  3299362 tatagcactgatggtgctctttttgggatatattgtgtatgtaattgact 3299411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 11105554 - 11105610
Alignment:
Q  356 agtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    ||||||||| |||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  11105554 agtgcttctcttttggattgatatagtataacactaacaatgttcattttggatata 11105610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 13045241 - 13045174
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 413  Q
    |||||||||||   ||||||||||||| ||||||||||| ||||||| |  |||||||||||||||||    
T  13045241 tttggatatagcatttcttttttggattgatatagtataacactaacgatcttccttttggatatagt 13045174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 3212893 - 3212943
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||| ||| |||||||||| |||||||||| ||||||||||||||    
T  3212893 gtatatcactgatgatgctctttttggtatatattgtgtatgtaattgact 3212943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 395
Target Start/End: Complemental strand, 13607632 - 13607590
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||||||||||||||||||||||| ||||||| |||| ||||    
T  13607632 tatagtgcttcttttttggatcgatttagtataacacttacaa 13607590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 26794686 - 26794389
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||| ||||||||| | | |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  26794686 gttcttcctcctgttgtaagagaaatttgagcactttctcttttatccattctttgaaaagaaataaaatggatccaaaaagggtagaagatttggttta 26794587  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26794586 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatatatgaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 26794487  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  26794486 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagttgatttgtatcttgatgatgggaatggaggagaagagatgta 26794389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 9792721 - 9793018
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9792721 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 9792820  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  9792821 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 9792920  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||| || |||| ||||||||    
T  9792921 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgagaatggaggagaggagatgta 9793018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 12852535 - 12852832
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12852535 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 12852634  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12852635 tgtgcatattaatcttcgactattgtcaaggaaagaagatggatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgatccgctt 12852734  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| ||||||||||||  ||| || |||| ||||||||    
T  12852735 gatggtgttggaattgagttagcatagttgtctttggatgaactggatttggaagttgatttgtatcttgatgatggaaatggaggagaggagatgta 12852832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 17 - 313
Target Start/End: Original strand, 33830187 - 33830483
Alignment:
Q  17 ttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttat 116  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  33830187 ttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtaaaagctttggtttat 33830286  T
Q  117 gtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttg 216  Q
    ||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  33830287 gtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggactatcaagaatgtgggacattagtggagatgtgcatgaaccgcttg 33830386  T
Q  217 atggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  33830387 atggtgttggaattgagttagcagagctgtctttggatgaaccggatttgaaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 33830483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 1639482 - 1639185
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1639482 gttcttcctcatgttgtgagagaaattggagtactttctattttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 1639383  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    ||||  |||||||||||||||||||| |||||||||| ||| |||||||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  1639382 tgtgcgtactaatcttcgactcttgtgaaggaaagaatatggatataagaaaggacaatctagaatgtggaacattagtggagatgcgcatgaacagctt 1639283  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||| || |||| ||||||||    
T  1639282 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttgcaagctgatttgtatcttgatgatgggaatggaggagaggagatgta 1639185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 32707594 - 32707325
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32707594 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 32707495  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32707494 tgtgcatattaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcgagaatgtgggacattggtggagatgcgcatgaaccgctt 32707395  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttg 285  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||| ||||||    
T  32707394 gatggtgttggaattgagttagcatagttgtctttgaatgaaccggattaggaagctgatttgtatcttg 32707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 30918777 - 30918984
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30918777 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 30918876  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30918877 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 30918976  T
Q  216 gatggtgt 223  Q
    ||| ||||    
T  30918977 gatagtgt 30918984  T

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Target: chr5; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 9793047 - 9793196
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  9793047 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 9793146  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  9793147 tataacactgatggtgctctttttggtatatattgcgtatgtaattgact 9793196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 39690098 - 39689949
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39690098 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatg 39689999  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||  | |||||||||||||| |||||||||| ||||||||||||||    
T  39689998 tatagctatgatggtgctctttttggtatatattgtgtatgtaattgact 39689949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 39690264 - 39690127
Alignment:
Q  176 aagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgat 275  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  39690264 aagaatgtgggacattagtggagatgcacatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaatcggatttggaagttgat 39690165  T
Q  276 ttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||| ||||||||||||||||| ||||||| ||||||||    
T  39690164 ttgtatcttgatgatgagaatggatgagaggagatgta 39690127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 1639156 - 1639009
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  1639156 ttagtactgatgtgttctttttaggatatagtgcttcttttttggatcgatataatatagcactaacaagttcattttggatataatgtagcattgatgt 1639057  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||| | |||||||| |||||||||||||||||||||||||||||    
T  1639056 atatcactgacggtgctct-ttttgtatatattgcgtatgtaattgact 1639009  T

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Target: chr5; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 10657215 - 10657345
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  10657215 ctttggatataatgcttcttttttggatcgatatagtatagcactaacaatgttccgtttggatatagtatagcattgatgtataacactaatggtgctc 10657314  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  10657315 tttttggtatattttgcgtatgtaattgact 10657345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 347 - 475
Target Start/End: Complemental strand, 26794348 - 26794220
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||   || ||| |||||||    
T  26794348 tttggatatagtgattcttttttggatcgatttagtataacactaacaagttccttttggatataatgtagcattgatgtttattcctgatgatgctctt 26794249  T
Q  447 ttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||||||||||||||||||||||||    
T  26794248 tttggtatatattgcgtatgtaattgact 26794220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 5985825 - 5985696
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||| || ||||||  |||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||| |||| ||| |||||    
T  5985825 ctttggatatagtgttttttttttt-atcgatatagtatagcactagcaatgttccttttggataaagtatagcattgatgtataacactgatgatgctc 5985727  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  5985726 tttttggtatattttgcgtatgtaattgact 5985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 9729680 - 9729570
Alignment:
Q  177 agaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatt 276  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||  | || ||||||||||||||  ||||||||| |||||    
T  9729680 agaatgtggaacattagtggagatgcgcatgaaccgtttgatggtattggaattgagttagc--acttatctttggatgaaccgtatttggaagttgatt 9729583  T
Q  277 tgaatcttgatga 289  Q
    || ||||||||||    
T  9729582 tgtatcttgatga 9729570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 329 - 419
Target Start/End: Original strand, 27085589 - 27085680
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| |||||    
T  27085589 agtactgatgtgttcttttttggatatagtgcttcttttttggatcgatataatatagcactaacaatgttcattttgaatatagtatagca 27085680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 22738081 - 22738162
Alignment:
Q  332 actgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  22738081 actgatgtgttctt-tttggatatagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatatagt 22738162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 17138132 - 17138035
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||| | |||||||||||    
T  17138132 agtattgatgtgttcttttttggatatagtgcttcttttttggattgatataatatagcactaacaatgttccttttgcatataatatagcattgatg 17138035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 26691856 - 26691954
Alignment:
Q  329 agtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| || ||||||||    
T  26691856 agtactgatgtgttatttttttggatatagtgcttcttttttggatcgatagagtataacactaacaatgttccttttggatatagtataacattgatg 26691954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 26961588 - 26961686
Alignment:
Q  329 agtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| || ||||||||    
T  26961588 agtactgatgtgttatttttttggatatagtgcttcttttttggatcgatagagtataacactaacaatgttccttttggatatagtataacattgatg 26961686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 33830512 - 33830611
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||    
T  33830512 ttagtactgatgtgttctttttttggatatagtgatt-ttttttggatcgatatagtataacactaacaagttccttttggatcga-tgtagcattgatg 33830609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 425
Target Start/End: Original strand, 3701322 - 3701401
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||    
T  3701322 tttggatacagtgcttcttttttggatcgatatagtataacactaacaatgttccttttggatatagtatagcactgatg 3701401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 475
Target Start/End: Original strand, 11907531 - 11907665
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgta 427  Q
    ||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||| ||| ||||| || |||||||||||||             |||    
T  11907531 agtactgatgtattctttttttgatatagtgcttcttttttggatcgatatattataacaccaacaatgtaccttttggatata-------------gta 11907617  T
Q  428 tagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    || |||| |||||||||||||| |||||||||| ||||||||||||||    
T  11907618 taacactgatggtgctctttttggtatatattgtgtatgtaattgact 11907665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 18001844 - 18001781
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaa 392  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  18001844 agtactgatgtgttcttttttgaatatagtgcttcttttttggatcgataaagtatagcactaa 18001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 409 - 475
Target Start/End: Original strand, 30918978 - 30919044
Alignment:
Q  409 atagtgtagcattgatgtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||    
T  30918978 atagtgtagcattgatgtataacactgatgatgctctttttggtatatattgcgtatgtaattgact 30919044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 1795635 - 1795696
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  1795635 tatagtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagt 1795696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 26716515 - 26716576
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  26716515 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttcattttggatatagt 26716576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 26986255 - 26986316
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  26986255 tatagtgcttcttttttggatcgatatagtatagcactaacaatgttcattttggatatagt 26986316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 419
Target Start/End: Complemental strand, 30284483 - 30284394
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||| |||||||||||| |||| |||||||||||  ||||||||||||||||||||| ||||||||| |||| ||||||||||||| |||||    
T  30284483 agtagtgatgtgttcttttttgaatatagtgctt--tttttggatcgatatagtataacactaacaatgttcattttggatatagtatagca 30284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 425
Target Start/End: Original strand, 15066449 - 15066528
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||| ||||| |||||    
T  15066449 tttggatataatgcttcttttttggatcaatatagtataacactaacaatgttcctttcggatatagtatagcactgatg 15066528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 25749848 - 25749915
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||    
T  25749848 tatagtgcttcttttttggatcgatgtaatatagcactaacaatgttcattttggatatagtgtagca 25749915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 27938401 - 27938468
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaaca-agttccttttggatatagtgtagca 419  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||| |||||    
T  27938401 tatagtgcttcttttttggatcgatatagtgtagcactaacagtgttccttttggatatagtatagca 27938468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 5722217 - 5722314
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||| |||||||||| | |||||||||||||||||||||| |||||||||| ||| ||||||||| |||  ||||||||||| | ||||| |||||    
T  5722217 agtacttatgtgttcttttatggatatagtgcttcttttttgaatcgatataggataacactaacaatgtttattttggatataatatagcactgatg 5722314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 14836574 - 14836635
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  14836574 tatagtgcttcttttttggatcgatatagtatatcactaacaaagtttcttttggatatagt 14836635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 425
Target Start/End: Original strand, 21251734 - 21251799
Alignment:
Q  361 ttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||||    
T  21251734 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagcactgatg 21251799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 43357635 - 43357574
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  43357635 tatagtgcttcttttttgaatcgatatagtatagcactaacaatgtttcttttggatatagt 43357574  T

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Target: chr5; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 395
Target Start/End: Complemental strand, 5612320 - 5612253
Alignment:
Q  329 agtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    |||| |||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  5612320 agtattgatgtgttctttttttggatatagtgcttctttttttgattgatatagtatagcactaacaa 5612253  T

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Target: chr5; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 30777405 - 30777346
Alignment:
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  30777405 agttagtagagttgtctttggatgaaccagatttggaagctggtttgtatcttgttgatg 30777346  T

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Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 7629293 - 7629355
Alignment:
Q  358 tgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||    
T  7629293 tgcttcttttttggatcgatatagtatagcactaacaatgtatcttttggatatagtatagca 7629355  T

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Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 396
Target Start/End: Original strand, 12852861 - 12852931
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaag 396  Q
    |||||||| ||||||| || ||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  12852861 ttagtacttatgtgttttttttttggatataatgattcttttttggatcgatatagtatagcactaacaag 12852931  T

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Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 30777281 - 30777203
Alignment:
Q  336 atgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||| ||| |||||||||||| |||||| ||||||||||||||| ||||||||| |||| ||||| |||||||    
T  30777281 atgtgttctttttttgatatagtgcttattttttagatcgatatagtataacactaacaatgttctttttgaatatagt 30777203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 6243043 - 6242979
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| | || |||||| |||||    
T  6243043 aattgagttagtagagttgtctttggatgaaccagattttgaagctggtgtgtatcttgttgatg 6242979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 34032602 - 34032666
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaac 393  Q
    |||||| |||||||||| |||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  34032602 agtactaatgtgttctttttttaatatagtgcttattttttggatcgataaagtatagcactaac 34032666  T

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Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 11907409 - 11907492
Alignment:
Q  227 aattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagat 310  Q
    ||||||||||  |||||| ||||||||||||||| ||||| ||||||||||| |||||||||| | |||| || |||| |||||    
T  11907409 aattgagttactagagttttctttggatgaaccacatttgaaagctgatttgtatcttgatgacgggaatggaggagaggagat 11907492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 3934663 - 3934602
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||    
T  3934663 tataatgcttcttttttggatcgatataatataacactaacaatgtttcttttggatatagt 3934602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 41233546 - 41233611
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttc-ttttttggatcgatatagtatagcactaac 393  Q
    |||||| |||||||||| |||||||||||| |||| |||||||||| |||| ||||||||||||||    
T  41233546 agtactaatgtgttcttttttggatatagtccttctttttttggattgataaagtatagcactaac 41233611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 1921023 - 1921086
Alignment:
Q  352 atatagtgcttcttttttggatcgatatagta-tagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||| || || ||||||||| | ||||||||||||||||    
T  1921023 atatagtgcttcttttttggatcgatataatattaacactaacaatgatccttttggatatagt 1921086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 419
Target Start/End: Complemental strand, 6242887 - 6242817
Alignment:
Q  352 atatagtgcttcttttttggatcg--atatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||||||||||||||||| |||||  |||||||||| ||||||||| |||| ||||||||||||| |||||    
T  6242887 atatagtgcttcttttttagatcgatatatagtataacactaacaatgttctttttggatatagtatagca 6242817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 473
Target Start/End: Original strand, 34032674 - 34032722
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattga 473  Q
    |||||||||| |||||||||||||| | |||||||| ||||||||||||    
T  34032674 gtatagcactgatggtgctctttttgggatatattgtgtatgtaattga 34032722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 6242824 - 6242774
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||  |||||||| ||||| |||||||||| ||||||||||||||    
T  6242824 gtatagcaccgatggtgctttttttggtatatattgtgtatgtaattgact 6242774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 7629348 - 7629398
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||||| |||||||||| | |||||||| |||||| |||||||    
T  7629348 gtatagcactaatgatgctctttttgggatatattgtgtatgtcattgact 7629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 411
Target Start/End: Complemental strand, 9729471 - 9729431
Alignment:
Q  372 atcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  9729471 atcgatatagtatagcattaacaatgttccttttggatata 9729431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 475
Target Start/End: Complemental strand, 30777198 - 30777154
Alignment:
Q  431 cactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||| ||| |||||||||| |||||||||| ||||||||||||||    
T  30777198 cactgatgatgctctttttggtatatattgtgtatgtaattgact 30777154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 223; Significance: 1e-122; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 16 - 310
Target Start/End: Original strand, 30324134 - 30324427
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  30324134 gttcttcctcatgttgtgagagaaattggagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaatatttggttta 30324233  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30324234 tgtggatactaatctccgactcttgtcaaggaaagaagatgaatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 30324333  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagat 310  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||||||| || |||| |||||    
T  30324334 gatgatgtt-gaattgagttagcagagttgtctttggatgaaccggatttggaaggtgatttgtatctcgatgatgagaatggaggagaggagat 30324427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 6916557 - 6916260
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6916557 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 6916458  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  6916457 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 6916358  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  6916357 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 6916260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 38330862 - 38331159
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38330862 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 38330961  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  38330962 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 38331061  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  38331062 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 38331159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 8132595 - 8132892
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  8132595 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaataaaatggatccaaaaagggtagaagatttggttta 8132694  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  8132695 tgtgcatattaatcttcgactgttgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgggacattagaggagatgcgcatgaaccgctt 8132794  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  8132795 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 8132892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 52895396 - 52895099
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52895396 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 52895297  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| |||||||||||||||  || |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  52895296 tgtgcatattaatcttcgactattgtcaaggaaagaatgtggatataagaaaggacaatcaagaatgtgagacattagaggagatgcgcatgaaccgctt 52895197  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || |||||||||||| |||| || |||| ||||||||    
T  52895196 gatggtgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatctgtatcttgatgatgggaatggaggagaggagatgta 52895099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 32 - 313
Target Start/End: Original strand, 5984616 - 5984897
Alignment:
Q  32 tgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatgtggatactaatctt 131  Q
    ||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||    
T  5984616 tgagagaaatttgagtactttctcttttatccattctttaaaaagaaacaaaatggatctaaaaagggtataagatttggtttatgtgcatactaatctt 5984715  T
Q  132 cgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattg 231  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5984716 cgactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattattggagatgcgcatgaaccgcttgatggtgttggaattg 5984815  T
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||| |||||| |||| || |||| ||||||||    
T  5984816 agttagcagagttgtctttggatgaactgaatttggaagctgatttgtatcttaatgatgggaatggaggagaggagatgta 5984897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 28659001 - 28658775
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28659001 gttcttcctcctgttgtgagagaaattagagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 28658902  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28658901 tgtgcatactaatcttcgactcttgtcaatgaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 28658802  T
Q  216 gatggtgttggaattgagttagcagag 242  Q
    |||||||||||||||||||||||||||    
T  28658801 gatggtgttggaattgagttagcagag 28658775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 28 - 313
Target Start/End: Original strand, 25257043 - 25257327
Alignment:
Q  28 gttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatgtggatactaa 127  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  25257043 gttgtgagagaaattgcagtactttctcttttatccattctttgaaaagaaataaaatggatccaaaaagggtagaagatttggtttatgtgcatactaa 25257142  T
Q  128 tcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttgga 227  Q
    ||||||| ||||||||||||||||| ||| |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25257143 tcttcgattcttgtcaaggaaagaaaatggatataagaaaggacagtcaggaatgtgggacattagtggagatgcgcatgaaccgcttgatgatgttgga 25257242  T
Q  228 attgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| || |||| ||||||||    
T  25257243 attgagttagaagagttgtctttggatgaaccggatttggaagctgatttgtatcttgatgatgggaatggaagaga-gagatgta 25257327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 16 - 285
Target Start/End: Original strand, 1043587 - 1043855
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  1043587 gttcttcctcatgttgtgagagaaatttggatactttctcttttatccattctttgaaaagaaacaaaatagatccaaaaagggtagaagatttggttta 1043686  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  1043687 tgtgcatactaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcgagaatgtgggagattggtggagatgcgcatgaaccgctt 1043786  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttg 285  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||||| ||||||    
T  1043787 gatggtgttggaattgagttagcagagttgt-tttgaatgaaccggattaggaagctgatttgtatcttg 1043855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 3427285 - 3427560
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  3427285 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaaaatttgg-tta 3427383  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||                     |||||| |||    
T  3427384 tgtgcatactaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtg---------------------tgaaccactt 3427462  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||| || |||| ||||||||    
T  3427463 gatgatgttggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaatggaggagaggagatgta 3427560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 25257356 - 25257503
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25257356 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 25257455  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  25257456 atagcactgatggtgctc-tttttgtatatattgcgtatgtaattgact 25257503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 327 - 471
Target Start/End: Original strand, 5984926 - 5985069
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5984926 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactgacaagttccttttggatatagtgtagcattgatgt 5985025  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    ||| |||| ||||||||| ||||||||||||||||||||||||||    
T  5985026 ataacactgatggtgctc-tttttgtatatattgcgtatgtaatt 5985069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 327 - 471
Target Start/End: Complemental strand, 36367547 - 36367402
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36367547 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 36367448  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  36367447 tataacactgctggtgctctttttggtatatattgcgtatgtaatt 36367402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 28948576 - 28948427
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28948576 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtataacactaacaagttccttttggatatagtgtagcattgatg 28948477  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||  | |||||||||||||| |||||||||| ||||||||||||||    
T  28948476 tatagctatgatggtgctctttttggtatatattgtgtatgtaattgact 28948427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 28948742 - 28948605
Alignment:
Q  176 aagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgat 275  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  28948742 aagaatgtgggacattagtggagatgcacatgaaccgcttgatggtgttggaattgagttagcagagttgtctttggatgaatcggatttggaagttgat 28948643  T
Q  276 ttgaatcttgatgatgagaatagatgagatgagatgta 313  Q
    ||| ||||||||||||||||| ||||||| ||||||||    
T  28948642 ttgtatcttgatgatgagaatggatgagaggagatgta 28948605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 30324459 - 30324606
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  30324459 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtatagcactaacaaattccttttggatatagtgtagcattgatgc 30324558  T
Q  427 atagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||| || ||| || ||||||||||||||||||| ||||||||||    
T  30324559 ataacactgatagtgatc-tttttgtatatattgcgtacgtaattgact 30324606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 28658770 - 28658621
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28658770 ttagtactgatgtgttctttttttgatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagca-tgatgt 28658672  T
Q  427 atagcact--aatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||   |||||| ||||||| ||||||||||| |||||||||||||    
T  28658671 atagcactgatatggtgttctttttggtatatattgcatatgtaattgact 28658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 327 - 471
Target Start/End: Original strand, 37104389 - 37104534
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37104389 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatagcactaacaagtttcttttggatatagtgtagcattgatg 37104488  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaatt 471  Q
    |||| ||||  ||||||| ||||| |||||||||||||||||||||    
T  37104489 tataacactgttggtgctatttttggtatatattgcgtatgtaatt 37104534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 347 - 471
Target Start/End: Complemental strand, 36363402 - 36363278
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  36363402 tttggatatagtgattcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtataacactgctggtgctctt 36363303  T
Q  447 ttttgtatatattgcgtatgtaatt 471  Q
    ||| |||||||||||||||||||||    
T  36363302 tttggtatatattgcgtatgtaatt 36363278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 6916231 - 6916079
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  6916231 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 6916132  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  6916131 tataacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 6916079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 327 - 475
Target Start/End: Original strand, 38331188 - 38331340
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  38331188 ttagtactgatgtgttctttttttggatatagtgattcttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 38331287  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||| |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  38331288 tataacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 38331340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 347 - 475
Target Start/End: Original strand, 3427616 - 3427744
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgtatagcactaatggtgctctt 446  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||  |||||||||||    
T  3427616 tttggatatagtgattcttttttggatcgatatagtataacactaacaagttcattttatatatagtgtagcattgatgtatagcacagatggtgctctt 3427715  T
Q  447 ttttgtatatattgcgtatgtaattgact 475  Q
    ||| |||||||||||||||||||||||||    
T  3427716 tttggtatatattgcgtatgtaattgact 3427744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 327 - 472
Target Start/End: Original strand, 8132921 - 8133067
Alignment:
Q  327 ttagtactgatgtgttcttctttgga-tatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  8132921 ttagtactgatgtgttctttttttgaatatagtgattcttttttggatcgatatagaatatcactaacaagttcattttggatatagtgtagcattgatg 8133020  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattg 472  Q
    |||| || | |||||||||||||| ||||||||||| ||||||||||    
T  8133021 tataacagtgatggtgctctttttggtatatattgcatatgtaattg 8133067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 43190014 - 43190144
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||  | ||||||    
T  43190014 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcattgatgtataacactgctcgtgctc 43190113  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||| ||||||||||| ||||||    
T  43190114 ttttttgtatattttgcgtatgtatttgact 43190144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 52895070 - 52894918
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  52895070 ttagtactgatgtgttctttttttggatatagtgatttttttttggatcgatatagtatatcactaacaagttcattttggatatagtgtagcattgatg 52894971  T
Q  426 tatagcactaatggtgctct---tttttgtatatattgcgtatgtaattgact 475  Q
    |||  |||| ||||||||||   |||| |||||||||||||||||||||||||    
T  52894970 tattacactgatggtgctcttaattttggtatatattgcgtatgtaattgact 52894918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 31653163 - 31653035
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||||  |||| |||| |||||||||    
T  31653163 ctttggatatagtgcttcttttttggatcgatatagtatagcattaacaattttccttttggatatagtatagcattga--tataacacttatggtgctc 31653066  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  31653065 tttttggtatattttgcgtatgtaattgact 31653035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 14334528 - 14334656
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||  |||| |||| |||||||||    
T  14334528 ctttggatatggtgcttcttttttggatcgatatagtatagcactaacaatgtttcttttggatatagtatagcattga--tataacactgatggtgctc 14334625  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| || |||||||||||||||    
T  14334626 tttttggtatattttacgtatgtaattgact 14334656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 13012737 - 13012616
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||| || |||||||||         |||||||||    
T  13012737 ctttggatatagtgcttcttttttggatcgatataatatagcactagcaatgttccttttagatatagtataacattgatgt---------atggtgctc 13012647  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||||| ||||||||||||||||||    
T  13012646 tttttggtatattttgcgtatgtaattgact 13012616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 329 - 475
Target Start/End: Original strand, 24851710 - 24851844
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgta 427  Q
    |||| |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||             |    
T  24851710 agtaatgatgtgttctttttttgatatagtgattcttttttggatcgatatagtatagcactaacaatgttcgttttggatatagt-------------a 24851796  T
Q  428 tagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  24851797 tagcacaaatggtgctctttttgggatatattgtgtatgtaattgact 24851844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 425
Target Start/End: Original strand, 47654904 - 47655001
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| | ||||| |||||    
T  47654904 agtactgatgtgttcttttacggatatagtgcttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatg 47655001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 346 - 475
Target Start/End: Complemental strand, 37346703 - 37346576
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gtt-ccttttggatatagtgtagcattgatgtatagcactaatggtgct 443  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||| ||| |||||| |||||||| |||||||||  |||| ||| |||||||||    
T  37346703 ctttggatatagtgcttctttttttgattgatatagtatagcattaacaatgttccctttttgatatagtatagcattga--tataacaccaatggtgct 37346606  T
Q  444 cttttttgtatatattgcgtatgtaattgact 475  Q
    |||||| |  ||| ||| ||||||||||||||    
T  37346605 ctttttgg--tattttgtgtatgtaattgact 37346576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 411
Target Start/End: Original strand, 36551624 - 36551707
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    |||| |||||||||||| |||| |||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  36551624 agtagtgatgtgttcttttttgaatatagtgtttcttttttagatcgatatagtataacactaacaatgttccttttggatata 36551707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 9528720 - 9528653
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaac-aagttccttttggatatagtgtagca 419  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |||||    
T  9528720 tatagtgcttcttttttggatcgatatagtatagcactaacgatgtttcttttggatatagtatagca 9528653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 3708164 - 3708100
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaac 393  Q
    ||||| ||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  3708164 agtaccgatgtgttcttttttagatataatgcttcttttttggatcgataaagtatagcactaac 3708100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 9781887 - 9781951
Alignment:
Q  356 agtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||    
T  9781887 agtgcttcttttttggatcgatacagtatagcactaacaatgtttcttttggatatagtatagca 9781951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 24590002 - 24589918
Alignment:
Q  329 agtactgatgtg-ttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatata 411  Q
    |||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||| |||||    
T  24590002 agtactgatgtgcttcttttttgaatatagtgtttcttttttggatcgatatagtataacactaacaatgttctttttgaatata 24589918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 419
Target Start/End: Complemental strand, 34096429 - 34096362
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| |||||||| |||||    
T  34096429 tatagtgcttcttttttagatcgatatagtatagcactaacaatgtttcttttagatatagtatagca 34096362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 34432291 - 34432230
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||    
T  34432291 tatagtgcttcttttttggatcgatatagtataacactaacaatgtttctttgggatatagt 34432230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 1036886 - 1036949
Alignment:
Q  221 tgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttg 285  Q
    |||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||||| ||||||    
T  1036886 tgttggaattgagttagcagagttgt-tttgaatgaaccggattaggaagctgatttgtatcttg 1036949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 10822636 - 10822703
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagca 419  Q
    |||| ||||||||||||||||||||||| |||| ||||||||| ||| |||||||||||||| |||||    
T  10822636 tataatgcttcttttttggatcgatataatatatcactaacaatgtttcttttggatatagtatagca 10822703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 2472794 - 2472736
Alignment:
Q  336 atgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaaca 394  Q
    ||||||| || ||||||||||||||||||||||  |||||||| |||||||||||||||    
T  2472794 atgtgttattttttggatatagtgcttctttttctgatcgataaagtatagcactaaca 2472736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 29168189 - 29168250
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||    
T  29168189 tataatgcttcttttttggatcaatatagtatagtactaacaatgtttcttttggatatagt 29168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 29862039 - 29862100
Alignment:
Q  353 tatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    ||||||||||||||||||||| |||| |||||| ||||||||| ||| ||||||||||||||    
T  29862039 tatagtgcttcttttttggattgataaagtataccactaacaatgtttcttttggatatagt 29862100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 10763899 - 10763955
Alignment:
Q  357 gtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatag 412  Q
    ||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||    
T  10763899 gtgcttcttttttagatcgatatagtatagcactaaaaatgtttcttttggatatag 10763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 37922465 - 37922529
Alignment:
Q  362 tcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatg 425  Q
    ||||| || ||| ||||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  37922465 tctttcttagatagatatagtatagcactaacaatgtttcttttggatatagtatagcattgatg 37922529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 32380940 - 32380873
Alignment:
Q  347 tttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagt 413  Q
    |||||||||| ||||||||||||| ||  |||||||||| ||||||||| |||||||||| |||||||    
T  32380940 tttggatataatgcttcttttttgaataaatatagtataacactaacaatgttccttttgaatatagt 32380873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 14167315 - 14167377
Alignment:
Q  357 gtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagc 418  Q
    |||||||||| |||||||||||||||||| ||||||||| ||  |||||||||||||| ||||    
T  14167315 gtgcttctttcttggatcgatatagtataacactaacaatgtatcttttggatatagtatagc 14167377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 472
Target Start/End: Complemental strand, 2472729 - 2472682
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattg 472  Q
    |||||||||| |||||||||||||| | |||||||| |||||||||||    
T  2472729 gtatagcactgatggtgctctttttaggatatattgtgtatgtaattg 2472682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 29168249 - 29168299
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |||| ||| |||||||||||| |||||||| ||||||||||||||    
T  29168249 gtatatcacttatgatgctcttttttggatatattgtgtatgtaattgact 29168299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 478
Target Start/End: Original strand, 37922516 - 37922569
Alignment:
Q  425 gtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgactgat 478  Q
    |||||||| | |||||||||||||| | |||||||| |||||||||||| ||||    
T  37922516 gtatagcattgatggtgctctttttgggatatattgtgtatgtaattgattgat 37922569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 7850 - 7581
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7850 gttcttcctcatgttgtgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 7751  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  7750 tgtgcatattaatcttcgactcttgtcaaggaaagaagatggatataagaaaggacaatcgagaatgtaggacattggtggagatgcgcatgaaccgctt 7651  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttg 285  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||    
T  7650 gatggtgttggaattgagttagcagagttgtctttgaatgaaccggattaggaagctgatttgtatcttg 7581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 32 - 285
Target Start/End: Complemental strand, 25297 - 25043
Alignment:
Q  32 tgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatgtggatactaatctt 131  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  25297 tgagagaaattggggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggtttatgtgcatactaatctt 25198  T
Q  132 cgactcttgtcaaggaaagaagat-gaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaatt 230  Q
    |||||||||||||||||||||||| | |||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25197 cgactcttgtcaaggaaagaagatgggatataagaaaggacaatagagaatgtgggacattggtggagatgcgcatgaaccgcttgatggtgttggaatt 25098  T
Q  231 gagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttg 285  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  25097 gagttagcagagttgtctttggatgaaccagattaggaagctgatttgtatcttg 25043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 296
Target Start/End: Complemental strand, 44299 - 44019
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  44299 gttcttcctcctgttgtgagagaaatttgagtactttctcttttatccagtctttaaaaagaaacaaaatggatccaaaaagggtagaaaatttggttta 44200  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| ||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  44199 tgtgcatattaatcttcgactattgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggatattagtggagatgcgcatgaaccgctt 44100  T
Q  216 gatggtgttggaattgagttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatgagaat 296  Q
    |||| | ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||    
T  44099 gatgatattggaattgagttagcagagttgtctttggatgaaccggatttggaagttgatttgtatcttgatgatgggaat 44019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 327 - 475
Target Start/End: Complemental strand, 43973 - 43824
Alignment:
Q  327 ttagtactgatgtgttcttcttt-ggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatg 425  Q
    |||||| |||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43973 ttagtattgatgtgttctttttttggatatagtgattctttttcggatcgatatagtatagcactaacaagttccttttggatacagtgtagcattgatg 43874  T
Q  426 tatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  43873 tatagcactgatggtgctctttttgatatatattgcgtatgtaattgact 43824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 32 - 291
Target Start/End: Complemental strand, 41761 - 41502
Alignment:
Q  32 tgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggtttatgtggatactaatctt 131  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  41761 tgagagaaattggagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggtttatgtgcatactaatctt 41662  T
Q  132 cgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgcttgatggtgttggaattg 231  Q
      ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  41661 ttactcttgtcaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattactggagatgcgcatgaacctcttgatggtgttggaattg 41562  T
Q  232 agttagcagagttgtctttggatgaaccagatttggaagctgatttgaatcttgatgatg 291  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||| |||||| |||||    
T  41561 agttagcagagttgtctttggatgaaccgaatttgcaagctgatttgtatcttgctgatg 41502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 327 - 449
Target Start/End: Complemental strand, 41451 - 41331
Alignment:
Q  327 ttagtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaagttccttttggatatagtgtagcattgatgt 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||   |||||    
T  41451 ttagtactgatgtgttcttttttggatatagtgcttcttttttggatcgatatagtataacactaacaagttccttttggatataatgtagc--cgatgt 41354  T
Q  427 atagcactaatggtgctcttttt 449  Q
    |||||| | |||||| |||||||    
T  41353 atagcattgatggtgatcttttt 41331  T

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Target: scaffold0060 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 30130 - 29923
Alignment:
Q  16 gttcttcctccggttgtgagagaaattagggtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaaggatagaagatttggttta 115  Q
    |||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30130 gttctttctcctgttgtgagagaaatttgagtactttctcttttatccattctttgaaaagaaacaaaatggatccaaaaagggtagaagatttggttta 30031  T
Q  116 tgtggatactaatcttcgactcttgtcaaggaaagaagatgaatataagaaaagacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 215  Q
    |||| |||||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30030 tgtgcatactaatcttcgactattgttaaggaaagaagatggatataagaaaggacaatcaagaatgtgggacattagtggagatgcgcatgaaccgctt 29931  T
Q  216 gatggtgt 223  Q
    ||| ||||    
T  29930 gatagtgt 29923  T

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Target: scaffold0060; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 475
Target Start/End: Complemental strand, 29929 - 29863
Alignment:
Q  409 atagtgtagcattgatgtatagcactaatggtgctcttttttgtatatattgcgtatgtaattgact 475  Q
    |||||||||||||||||||||  ||| ||| |||||||||| |||||||||||||||||||||||||    
T  29929 atagtgtagcattgatgtataaaactgatgatgctctttttggtatatattgcgtatgtaattgact 29863  T

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Target: scaffold0250 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 475
Target Start/End: Original strand, 5901 - 6027
Alignment:
Q  346 ctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa-gttccttttggatatagtgtagcattgatgtatagcactaatggtgctc 444  Q
    |||||||||||||||||||||||| ||| ||||||||||| || |||||| ||||||||| |||||||| |||||||||  |||| |||  |||||||||    
T  5901 ctttggatatagtgcttctttttttgattgatatagtataacattaacaatgttcctttttgatatagtatagcattga--tataacaccgatggtgctc 5998  T
Q  445 ttttttgtatatattgcgtatgtaattgact 475  Q
    ||||| |  ||| ||| ||||||||||||||    
T  5999 tttttgg--tattttgtgtatgtaattgact 6027  T

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Target: scaffold0285 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 395
Target Start/End: Original strand, 13618 - 13683
Alignment:
Q  329 agtactgatgtgttcttctttggatatagtgcttcttttttggatcgatatagtatagcactaacaa 395  Q
    ||||| ||||||||||| | ||||||||||||||| |||||||||| |||||||||| || ||||||    
T  13618 agtaccgatgtgttcttttatggatatagtgcttc-tttttggatcaatatagtataacagtaacaa 13683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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