View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9860_low_20 (Length: 251)

Name: NF9860_low_20
Description: NF9860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9860_low_20
NF9860_low_20
[»] chr6 (27 HSPs)
chr6 (21-251)||(29482597-29482827)
chr6 (24-229)||(18736009-18736214)
chr6 (28-229)||(18728934-18729135)
chr6 (24-229)||(23574403-23574608)
chr6 (21-226)||(12738501-12738706)
chr6 (24-229)||(14910614-14910820)
chr6 (24-229)||(18014443-18014648)
chr6 (24-229)||(8306073-8306274)
chr6 (21-215)||(15119720-15119912)
chr6 (24-229)||(4409205-4409410)
chr6 (25-214)||(19860052-19860241)
chr6 (24-229)||(7968480-7968685)
chr6 (24-209)||(24438567-24438751)
chr6 (42-229)||(29095003-29095190)
chr6 (24-229)||(18258580-18258785)
chr6 (24-204)||(15318989-15319168)
chr6 (43-214)||(15349628-15349800)
chr6 (78-229)||(3876381-3876532)
chr6 (44-214)||(15369624-15369795)
chr6 (79-198)||(23524128-23524247)
chr6 (24-140)||(18043349-18043465)
chr6 (137-229)||(21508624-21508716)
chr6 (92-209)||(17757023-17757140)
chr6 (24-164)||(14480004-14480143)
chr6 (74-158)||(7099283-7099367)
chr6 (74-158)||(8795263-8795347)
chr6 (41-111)||(17748627-17748697)
[»] chr2 (13 HSPs)
chr2 (25-229)||(25133919-25134123)
chr2 (24-229)||(42534108-42534313)
chr2 (14-209)||(41266201-41266396)
chr2 (24-229)||(23755804-23756009)
chr2 (27-229)||(3105216-3105418)
chr2 (24-229)||(3770269-3770474)
chr2 (24-229)||(23929806-23930011)
chr2 (24-229)||(19092730-19092935)
chr2 (24-208)||(29568324-29568507)
chr2 (66-229)||(26154968-26155131)
chr2 (24-94)||(26159154-26159224)
chr2 (25-215)||(27347181-27347369)
chr2 (42-143)||(5356529-5356630)
[»] scaffold0002 (2 HSPs)
scaffold0002 (24-229)||(391468-391673)
scaffold0002 (24-229)||(380771-380975)
[»] chr8 (17 HSPs)
chr8 (24-229)||(7454652-7454857)
chr8 (25-229)||(18040467-18040670)
chr8 (24-229)||(32008999-32009204)
chr8 (26-209)||(18574023-18574209)
chr8 (41-229)||(41280796-41280983)
chr8 (24-229)||(7999659-7999862)
chr8 (24-227)||(2085730-2085933)
chr8 (24-229)||(24060567-24060772)
chr8 (25-229)||(24033772-24033979)
chr8 (24-203)||(10532801-10532980)
chr8 (24-229)||(22609478-22609683)
chr8 (24-224)||(33273513-33273697)
chr8 (24-210)||(11709377-11709563)
chr8 (42-212)||(25820743-25820913)
chr8 (24-60)||(17775717-17775753)
chr8 (42-97)||(1788677-1788732)
chr8 (164-209)||(10532746-10532791)
[»] chr5 (18 HSPs)
chr5 (24-229)||(28068009-28068214)
chr5 (27-226)||(15620180-15620379)
chr5 (24-220)||(22922633-22922829)
chr5 (24-229)||(5931199-5931404)
chr5 (24-229)||(42792490-42792695)
chr5 (27-229)||(23495362-23495562)
chr5 (24-229)||(41037631-41037845)
chr5 (24-229)||(8244520-8244730)
chr5 (24-206)||(22922050-22922232)
chr5 (13-229)||(20899582-20899796)
chr5 (87-229)||(19329910-19330052)
chr5 (42-229)||(36712635-36712822)
chr5 (42-215)||(5590697-5590870)
chr5 (13-185)||(38608266-38608437)
chr5 (44-215)||(33622490-33622664)
chr5 (166-229)||(24095343-24095406)
chr5 (131-229)||(22510097-22510195)
chr5 (24-56)||(19330051-19330083)
[»] scaffold0034 (1 HSPs)
scaffold0034 (24-229)||(47401-47606)
[»] chr7 (17 HSPs)
chr7 (24-229)||(29164858-29165063)
chr7 (24-224)||(9548959-9549159)
chr7 (24-229)||(30770173-30770377)
chr7 (24-229)||(20093545-20093750)
chr7 (24-229)||(21802459-21802664)
chr7 (25-229)||(7595360-7595563)
chr7 (27-229)||(2249977-2250179)
chr7 (24-229)||(22705614-22705813)
chr7 (24-125)||(22703905-22704006)
chr7 (42-229)||(47295667-47295854)
chr7 (42-215)||(18153155-18153328)
chr7 (13-229)||(21592863-21593077)
chr7 (78-229)||(38612620-38612771)
chr7 (42-215)||(18185651-18185824)
chr7 (24-164)||(28794078-28794217)
chr7 (151-224)||(21801836-21801909)
chr7 (81-209)||(30764986-30765114)
[»] scaffold0280 (1 HSPs)
scaffold0280 (24-229)||(1026-1231)
[»] chr4 (21 HSPs)
chr4 (24-229)||(12885289-12885494)
chr4 (24-229)||(10985699-10985903)
chr4 (24-229)||(3268343-3268548)
chr4 (24-229)||(3270555-3270760)
chr4 (24-229)||(12217570-12217769)
chr4 (31-229)||(21332530-21332728)
chr4 (24-229)||(9901687-9901892)
chr4 (30-229)||(49402707-49402908)
chr4 (24-229)||(8082054-8082258)
chr4 (24-229)||(45313156-45313360)
chr4 (30-211)||(26780819-26781000)
chr4 (42-229)||(13861340-13861527)
chr4 (42-229)||(25239721-25239908)
chr4 (45-229)||(17282476-17282660)
chr4 (25-229)||(28891919-28892126)
chr4 (92-229)||(16396252-16396389)
chr4 (41-208)||(15455466-15455633)
chr4 (37-156)||(34845516-34845635)
chr4 (168-229)||(15427832-15427893)
chr4 (168-229)||(15434450-15434511)
chr4 (24-80)||(18284661-18284715)
[»] chr1 (13 HSPs)
chr1 (24-229)||(8990747-8990952)
chr1 (24-229)||(8995424-8995628)
chr1 (24-229)||(19967404-19967609)
chr1 (24-225)||(19442100-19442301)
chr1 (24-227)||(38621812-38622015)
chr1 (24-229)||(9858976-9859185)
chr1 (13-215)||(24973886-24974086)
chr1 (13-229)||(21817724-21817938)
chr1 (42-119)||(22186082-22186159)
chr1 (13-119)||(21815619-21815723)
chr1 (162-229)||(21815542-21815609)
chr1 (162-229)||(49472350-49472417)
chr1 (151-226)||(33028929-33029005)
[»] scaffold0989 (1 HSPs)
scaffold0989 (24-229)||(1507-1712)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-229)||(151277-151481)
[»] chr3 (10 HSPs)
chr3 (24-229)||(22915061-22915266)
chr3 (42-227)||(16852996-16853181)
chr3 (86-229)||(19790346-19790489)
chr3 (24-213)||(16914715-16914904)
chr3 (42-113)||(22006519-22006590)
chr3 (42-113)||(22014036-22014107)
chr3 (24-90)||(19773395-19773462)
chr3 (24-229)||(3559105-3559308)
chr3 (24-96)||(1998015-1998087)
chr3 (91-226)||(44635823-44635958)
[»] scaffold0083 (1 HSPs)
scaffold0083 (24-227)||(4184-4387)
[»] scaffold0058 (2 HSPs)
scaffold0058 (24-209)||(1617-1803)
scaffold0058 (24-167)||(15374-15517)
[»] scaffold0042 (2 HSPs)
scaffold0042 (29-227)||(74859-75057)
scaffold0042 (31-229)||(68689-68887)
[»] scaffold0170 (1 HSPs)
scaffold0170 (26-229)||(16301-16505)
[»] scaffold0008 (2 HSPs)
scaffold0008 (25-229)||(253323-253527)
scaffold0008 (27-229)||(242685-242887)
[»] scaffold0150 (1 HSPs)
scaffold0150 (27-229)||(30043-30245)
[»] scaffold0111 (1 HSPs)
scaffold0111 (35-229)||(2816-3009)
[»] scaffold0013 (1 HSPs)
scaffold0013 (24-229)||(37212-37416)
[»] scaffold0192 (1 HSPs)
scaffold0192 (24-229)||(12332-12535)
[»] scaffold0265 (3 HSPs)
scaffold0265 (13-229)||(14871-15085)
scaffold0265 (13-119)||(17086-17190)
scaffold0265 (162-229)||(17200-17267)
[»] scaffold0096 (1 HSPs)
scaffold0096 (42-215)||(10872-11045)
[»] scaffold0025 (1 HSPs)
scaffold0025 (26-143)||(86434-86551)
[»] scaffold0299 (1 HSPs)
scaffold0299 (27-119)||(19162-19254)
[»] scaffold0362 (1 HSPs)
scaffold0362 (42-229)||(7336-7522)
[»] scaffold0084 (1 HSPs)
scaffold0084 (48-228)||(54590-54770)
[»] scaffold0011 (1 HSPs)
scaffold0011 (44-223)||(20276-20455)
[»] scaffold0483 (1 HSPs)
scaffold0483 (102-219)||(9227-9339)
[»] scaffold0063 (2 HSPs)
scaffold0063 (24-229)||(36765-36969)
scaffold0063 (24-116)||(49325-49416)


Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 29482597 - 29482827
Alignment:
Q  21 tgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctg 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  29482597 tgggggtttagaggaagagatagattctaccttggggactactatgagtcccctatttatagaggtggagggctgtagagtcgttgtaatggcacacctg 29482696  T
Q  121 gttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcg 220  Q
    |||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29482697 gttctagcggttacgaaatcgtgggaagtataactgtgagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcg 29482796  T
Q  221 ctccgtgcagcactttttgggaaaaggggtg 251  Q
    |||||||||||||||| ||||||||||||||    
T  29482797 ctccgtgcagcactttgtgggaaaaggggtg 29482827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 18736009 - 18736214
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||| |    
T  18736009 gggtttagaggaagagataaattctagcttggggactgctatgagtcccctatttatagaggtggagggctgctgagccgttgtaatggcacacctggct 18736108  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||||||||| |||  |||| ||| || ||||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||||||    
T  18736109 ctggcggttacgaaattgtgggaagtctaatcgccagagagtttattgcgggaacgtgtagagagacgttgtggctcgtttgaaccaatctcgctcgctc 18736208  T
Q  224 cgtgca 229  Q
    ||||||    
T  18736209 cgtgca 18736214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 229
Target Start/End: Original strand, 18728934 - 18729135
Alignment:
Q  28 ttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctag 127  Q
    ||||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||| | ||||||||| |||||||| ||| |    
T  18728934 ttagaggaagagatagattctaccttgaggactgttatgagtcccctatttatagaggtggagggctgcagagacattgtaatggaacacctggctctgg 18729033  T
Q  128 cggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtg 227  Q
    ||| ||| ||||||||  |||| |||||| || |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  18729034 cgggtacaaaatcgtgggaagtgtaaccgccatagagtttattgcggaaacgtgcagagagacgttgtggctcctttgaaccggtctcgttcgctccgtg 18729133  T
Q  228 ca 229  Q
    ||    
T  18729134 ca 18729135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 23574403 - 23574608
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||| ||||||||||||| |||||||||||||||| ||| |    
T  23574403 gggtttagaggaagagatagattctaccttgtggactgctttgagtcccctatttatagaggtagagggctgcagagccgttgtaatggcacacttggct 23574502  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || || |||||||| |||||  |||| |||||  |||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||| ||||||    
T  23574503 ctggctgttacgaagtcgtggaaagtgtaaccaccagagagtttattgcgagaacatgtagagagacgttgtggttcgtttgaaccagtctcgttcgctc 23574602  T
Q  224 cgtgca 229  Q
    ||||||    
T  23574603 cgtgca 23574608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 12738501 - 12738706
Alignment:
Q  21 tgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctg 120  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||    
T  12738501 tgggggtttagaggaagagatagattctacctaggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcacatctg 12738600  T
Q  121 gttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcg 220  Q
    | | |  || |||||||||||||  |||| |||||   |||||||||||||||||||| |||||||||||||||||| ||||||||||  |||| | |||    
T  12738601 gctatgacgattacgaaatcgtgggaagtgtaacctctagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaactagtcttgttcg 12738700  T
Q  221 ctccgt 226  Q
    ||||||    
T  12738701 ctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 14910614 - 14910820
Alignment:
Q  24 gggtttagaggaagagatagatt-ctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggt 122  Q
    |||||||||||||||| |||||| |||||||||||||| |  |||||||| ||| |||||||||||||||||||| || |||||||||||||||| | |     
T  14910614 gggtttagaggaagagctagatttctaccttggggactgcagtgagtcccctatatatagaggtggagggctgcaaagccgttgtaatggcacacatcgc 14910713  T
Q  123 tctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgct 222  Q
    ||| || |||||||||| |||  |||| |||||| || |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  14910714 tctggcagttacgaaattgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccggtcttgctcgct 14910813  T
Q  223 ccgtgca 229  Q
    |||||||    
T  14910814 ccgtgca 14910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 18014648 - 18014443
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||| | |    
T  18014648 gggttaagaggaagagattgattctaccttggggactgctatgagtcccctacatatagaggtggagggctgcagagccgttgtaatggcacacctagct 18014549  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||||  ||||||| ||||||||||||| | |||  | || |||||| |||||||||| ||||| ||||||||    
T  18014548 ctggcggttacgaaatcgtgggaagtctaaccaccagagagattattgcgggaacgtacagtcaaacattgtggttcgtttgaactggtcttgctcgctc 18014449  T
Q  224 cgtgca 229  Q
    ||||||    
T  18014448 cgtgca 18014443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 8306073 - 8306274
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||    ||||||||||||||| || |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||  |    
T  8306073 gggtttagaggaagagat----tctaccttggggactgctgtgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcacacctgact 8306168  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||| |||| |||||| ||  |||| |||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||  ||||||    
T  8306169 ctagcagttatgaaatcatggaaagtgtaaccgccagagagtttattgcgggaacctacagagagacgttgtgactcgtttgaaccagtctctttcgctc 8306268  T
Q  224 cgtgca 229  Q
     |||||    
T  8306269 tgtgca 8306274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 15119912 - 15119720
Alignment:
Q  21 tgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctg 120  Q
    |||||||||||| ||||||||||||||||||||||||| |  |  ||||||| ||||||||||||||||| | ||||||| |  ||||||||||||||||    
T  15119912 tgggggtttagatgaagagatagattctaccttggggattgtt--gagtcccctatttatagaggtggagagttgcagagccagtgtaatggcacacctg 15119815  T
Q  121 gttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
    | ||| |||||||| ||||||||  |||||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  15119814 gctctggcggttacaaaatcgtgggaagtataaccgctagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaacctgtctc 15119720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 4409205 - 4409410
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| |  ||| |||  |||||||||||||||||||||||| || ||||  |||||||||||| | |    
T  4409205 gggtttagaggaagagatagattctaccttggggactgcattgaatcctctatttatagaggtggagggctgcaaagccgttacaatggcacaccttgct 4409304  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||| ||||||||| |||| ||||||  || | ||||||||||||||| |||| ||||||||||||| ||||||||||| |||||  ||||||    
T  4409305 ctggcggttacaaaatcgtgagaagtgtaaccgctagggcgtttattgcgggaacgtgcatagagacgttgtggttcgtttgaaccagtctctttcgctc 4409404  T
Q  224 cgtgca 229  Q
    ||||||    
T  4409405 cgtgca 4409410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 19860241 - 19860052
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    |||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||    
T  19860241 ggtttagaggaatagataaattctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcggagccgttgtaatgggacacctggctc 19860142  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtct 214  Q
    | |||||||||||||||||  |||| |||||  ||||||| |||||| |||||||||  ||||||||||| || ||||||||||| ||||    
T  19860141 tggcggttacgaaatcgtgggaagtgtaaccaccagagagattattgtgggaacatgttgagagacgttgcggttcgtttgaaccagtct 19860052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 7968685 - 7968480
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||| ||||||| ||||||||||| ||||||||||| |  |||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||  |    
T  7968685 gggttaagaggaaaagatagattctgccttggggactgcattgagtcccctatatatagaggtggagggctgcagagctgttgtaatggcacacctgact 7968586  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||||||||| |||  |||| |||||| ||| | |||||||| |||||| |||||||||||||||||| ||||||||||| |||||  ||| ||    
T  7968585 ctggcggttacgaaattgtggaaagtgtaaccgccagggggtttattgtgggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgttc 7968486  T
Q  224 cgtgca 229  Q
    ||||||    
T  7968485 cgtgca 7968480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 24438751 - 24438567
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||| ||||  |||||||||||||||||| ||||||||| |    
T  24438751 gggtttagaggaagagatagattataccttggg-actgctgtgagtcccctatttatagaggtagaggattgcagagtcgttgtaatgacacacctggct 24438653  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaacc 209  Q
    || |||||||||||||||||  |||| |||||| || |||||| ||||| ||||| |||| ||||||| ||||| |||||||||||    
T  24438652 cttgcggttacgaaatcgtgggaagtgtaaccgccatagagttgattgcaggaacgtgcaaagagacgatgtggttcgtttgaacc 24438567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 29095190 - 29095003
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||   |||  ||||||||||||||    
T  29095190 agattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcg 29095091  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||  |||| |||||| | | ||||||||||||||||| || | |||||||||| || |||||||||||||||||  ||| ||||||||    
T  29095090 tgggaagtgtaaccgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccggtctctttcgttccgtgca 29095003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 18258785 - 18258580
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||| || | |||||||||||||||| ||||  | |||||||| ||||||||||||| |||||||| |||| ||||||| |||||||||||| |    
T  18258785 gggtttagagaaaaatatagattctaccttggagactgttgtgagtcccctatttatagaggtagagggctgtagagccgttgtagtggcacacctggct 18258686  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||   ||||||||||| |||  |||| |||| |  | |||||||||||||||||  ||| |||||||||||||| || |||||||||||||| ||||||     
T  18258685 ctgatggttacgaaattgtgggaagtgtaactgctaaagagtttattgcgggaatgtgcggagagacgttgtggttcctttgaaccggtctcactcgctt 18258586  T
Q  224 cgtgca 229  Q
    ||||||    
T  18258585 cgtgca 18258580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 15319168 - 15318989
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||| ||||| | |||||||||||||||||| ||| |||| || ||| |||||||||||||||||||||||||||||| |||| |||||| | |    
T  15319168 gggtttagagaaagag-tcgattctaccttggggactgctaagagttccctatatatagaggtggagggctgcagagtcgttgtgatggtacacctaggt 15319070  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgttt 204  Q
    || |||||||||||||||||  |||| ||||||  |||||| ||||||| ||||| |||| ||||| ||||||| ||||||    
T  15319069 ctggcggttacgaaatcgtgggaagtgtaaccgctagagagattattgcaggaacgtgcaaagagaagttgtggttcgttt 15318989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 15349800 - 15349628
Alignment:
Q  43 gattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgt 142  Q
    |||||||| ||||||||| ||| ||||||| ||| ||||||||||||||||||||||| |||||| || |||||||||| ||| ||||||||||||||||    
T  15349800 gattctacgttggggactgctaagagtcccctatatatagaggtggagggctgcagagccgttgtgatagcacacctgggtctggcggttacgaaatcgt 15349701  T
Q  143 gataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcg-tttgaaccggtct 214  Q
    |  |||| ||||||  |||||| |||||| |||||| |||| ||||| ||||||| ||| |||||||||||||    
T  15349700 gggaagtgtaaccgcgagagagattattgtgggaacgtgcaaagagatgttgtggttcgttttgaaccggtct 15349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 3876381 - 3876532
Alignment:
Q  78 tatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaa 177  Q
    ||||||||||||||||||||||| |||||| | | |||||||   ||| ||||||||||||||||   |||| ||| |||||||||| ||||||||||||    
T  3876381 tatagaggtggagggctgcagagccgttgtgaagacacacctaagtctggcggttacgaaatcgtaggaagtgtaatcgtcagagagattattgcgggaa 3876480  T
Q  178 catgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
     ||||| ||||||||||| |||| ||||||||| ||| ||| ||||||||||    
T  3876481 tatgcaaagagacgttgtagctcatttgaaccgatcttgcttgctccgtgca 3876532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 214
Target Start/End: Complemental strand, 15369795 - 15369624
Alignment:
Q  44 attctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtg 143  Q
    ||||||||||||||||| ||| ||||||  ||| |||||||||||||||||| ||||||||| | |||| |||||| | ||| ||||||||||||| ||     
T  15369795 attctaccttggggactgctaagagtcctctatatatagaggtggagggctgtagagtcgttatgatggtacacctaggtctggcggttacgaaattgta 15369696  T
Q  144 ataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcg-tttgaaccggtct 214  Q
      |||| |||||| |||| || ||||||||||||| |||| ||||| ||||||| ||| |||||||||||||    
T  15369695 ggaagtgtaaccgccagacagattattgcgggaacgtgcaaagagaagttgtggttcgttttgaaccggtct 15369624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 23524128 - 23524247
Alignment:
Q  79 atagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaac 178  Q
    ||||| |||||||||||||||| | |||||||||||||||||| ||| ||||||| |||||||||  |||| ||||| ||| ||||||||||||||||||    
T  23524128 atagacgtggagggctgcagagccattgtaatggcacacctggctctggcggttaagaaatcgtggaaagtgtaaccatcaaagagtttattgcgggaac 23524227  T
Q  179 atgcagagagacgttgtggc 198  Q
     |||||||||| ||||||||    
T  23524228 gtgcagagagaagttgtggc 23524247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 18043349 - 18043465
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||| ||||||||||||||||| |  | |||||| |||||||||||||||||||||||| || |||||||||| ||| | ||  |    
T  18043349 gggtttagaggaagagataaattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcaaagccgttgtaatgacacgcatgact 18043448  T
Q  124 ctagcggttacgaaatc 140  Q
    || |||| |||||||||    
T  18043449 ctggcgggtacgaaatc 18043465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 21508716 - 21508624
Alignment:
Q  137 aatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||||  |||| |||||| || |||||||||||| ||||| |||||||||||| ||||| ||| ||||||| |||||  ||||||||||||    
T  21508716 aatcgtgggaagtgtaaccgccatagagtttattgcaggaacgtgcagagagacgctgtggttcgattgaaccagtctctttcgctccgtgca 21508624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 17757140 - 17757023
Alignment:
Q  92 gctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacg 191  Q
    ||||| ||| ||||||||||||||||||   |||  ||||||| ||||||||  |||| |||||| | | |||||||||| |||||| || | |||||||    
T  17757140 gctgccgagccgttgtaatggcacaccttactctgacggttacaaaatcgtgggaagtgtaaccgcctgtgagtttattgtgggaacgtggaaagagacg 17757041  T
Q  192 ttgtggctcgtttgaacc 209  Q
    ||| || |||||||||||    
T  17757040 ttggggttcgtttgaacc 17757023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 14480004 - 14480143
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| | ||||||||||||||| |||||||  || ||||||| ||| ||||  |||||  |||||||||| | |||||||||||||| ||  |    
T  14480004 gggtttagaggga-agatagattctacctaggggactgttaagagtcccctatatataccggtgggtggctgcagagccattgtaatggcacacgtgtgt 14480102  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagag 164  Q
    |  || ||||||||||||||  || | |||||||| |||||    
T  14480103 ccggcagttacgaaatcgtggaaaatgtaaccgtcggagag 14480143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 7099367 - 7099283
Alignment:
Q  74 tatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtc 158  Q
    |||||||||||||||  |  ||||||| |||||||||||||||  ||| ||  ||||||||||||||| || |||| ||||||||    
T  7099367 tatttatagaggtgggtgaatgcagagccgttgtaatggcacatgtgggtcccgcggttacgaaatcgggaaaagtgtaaccgtc 7099283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 8795263 - 8795347
Alignment:
Q  74 tatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtc 158  Q
    |||||||||||||||  |  ||||||| |||||||||||||||  ||| ||  ||||||||||||||| || |||| ||||||||    
T  8795263 tatttatagaggtgggtgaatgcagagccgttgtaatggcacatgtgggtcccgcggttacgaaatcgggaaaagtgtaaccgtc 8795347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 17748697 - 17748627
Alignment:
Q  41 tagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatg 111  Q
    ||||||||||||||||||||| || || ||||  || |||||||||||  ||||| ||||| |||||||||    
T  17748697 tagattctaccttggggactattaagaatcccccatatatagaggtgggtggctgtagagttgttgtaatg 17748627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 229
Target Start/End: Complemental strand, 25134123 - 25133919
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| ||    
T  25134123 ggtttagaggaagagatagattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtagtggcacacctggctc 25134024  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctcc 224  Q
    | ||||||||||||||||| ||||| |||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||||| |||||    
T  25134023 tggcggttacgaaatcgtggtaagtgtaaccgccagagagtttattgcgggaacgtgcaaagagacgttgtggttcgtttgaaccagtctcgcttgctcc 25133924  T
Q  225 gtgca 229  Q
    |||||    
T  25133923 gtgca 25133919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 42534313 - 42534108
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||| ||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| |    
T  42534313 gggtttagcggaggagttagattctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacatctggct 42534214  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||     
T  42534213 ctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggctcgtttgaacaggtctcgctcgcta 42534114  T
Q  224 cgtgca 229  Q
    ||||||    
T  42534113 cgtgca 42534108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 209
Target Start/End: Complemental strand, 41266396 - 41266201
Alignment:
Q  14 agagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggc 113  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41266396 agagagtgagggttttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggc 41266297  T
Q  114 acacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaacc 209  Q
    |||||||| ||| |||||||||| ||||||| |||| |||||| | ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  41266296 acacctggctctggcggttacgatatcgtgagaagtgtaaccgcccgagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaacc 41266201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 23756009 - 23755804
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||| |    
T  23756009 gggtttagaggaagagatagattctaccttggggactgttgtgagtcccctatttatagaggtggaaggctgtagagccgttgtaatggcacacctggct 23755910  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||||||||||||||||||  |||| |||||| || |||||||||||||||||| |||||||||||||||||| || |||||||| ||| |  ||||||    
T  23755909 ctagcggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcttttgaaccagtcactttcgctc 23755810  T
Q  224 cgtgca 229  Q
    ||||||    
T  23755809 cgtgca 23755804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 3105216 - 3105418
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttcta 126  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||  || |||| |||||||||| |||||||   |||     
T  3105216 tttagaggaagagttagattctaccttggggactgctatgagtcccatatttatagaggtggaggattgtagagccgttgtaatgacacacctaactctc 3105315  T
Q  127 gcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
      ||||| |||||||||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  3105316 atggttatgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggctcgtttgaaccggtctcgctcgctctgt 3105415  T
Q  227 gca 229  Q
    |||    
T  3105416 gca 3105418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 3770269 - 3770474
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||| |||||||||||||||||||||||||||||  | ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  3770269 gggtttaaaggaagagatagattctaccttggggactgttgtgaatcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggct 3770368  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||| ||||||||  |||| ||||||  |||||||||||||||| ||| ||||||||||||||| || ||||||||||| ||||| |||||||    
T  3770369 ctggcggttacaaaatcgtggaaagtgtaaccgctagagagtttattgcggaaacgtgcagagagacgttgaggttcgtttgaaccagtctctctcgctc 3770468  T
Q  224 cgtgca 229  Q
    | ||||    
T  3770469 catgca 3770474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 23929806 - 23930011
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||| |||||| ||||||||||||| |  |||||||| ||| || |||||||||||||||||||| |||||||||||||||||||| |    
T  23929806 gggtttagaggaagagttagattttaccttggggactgcagtgagtcccctatataaagaggtggagggctgcagagccgttgtaatggcacacctggct 23929905  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||||| |||||||  |||| |||||| | |||||||||||| |||||| ||||||||||| |||||| || ||||||||||||||||||||||    
T  23929906 ctggcggttacggaatcgtgggaagtgtaaccgccggagagtttattgtgggaacgtgcagagagacattgtggttcatttgaaccggtctcgctcgctc 23930005  T
Q  224 cgtgca 229  Q
    ||||||    
T  23930006 cgtgca 23930011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 19092730 - 19092935
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||| |||||||||| |||||| |  |    
T  19092730 gggtttagaggaagagataaatcctaccttggggactgctatgagtcccctatatatagaggtggggggctgcagagccgttgtaatgacacaccagact 19092829  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||| |||| | |||  |||| |||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||| | ||||||    
T  19092830 ctcgcggtttcgaacttgtgggaagtgtaaccgccagagagattattgcgggaacgtgcagagagacgttgtggttcgtttgaactagtcttgttcgctc 19092929  T
Q  224 cgtgca 229  Q
    ||||||    
T  19092930 cgtgca 19092935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 29568324 - 29568507
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||| |||||||||| ||||| |  | |||||||||||  |||||||||||||||||||| ||||| ||||||||||| |||||||| |    
T  29568324 gggtttagaggaagacatagattctaacttggcggttgctatgagtccccaatttatagaggtggagggctacagagccgttgtaatggtacacctggct 29568423  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaac 208  Q
    || |||||||||||||||||  |||| ||||||  |||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  29568424 ctggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattgc-ggaacgtgtagagagacgttgtggctcgtttgaac 29568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 229
Target Start/End: Complemental strand, 26155131 - 26154968
Alignment:
Q  66 gagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagt 165  Q
    ||||||| |||||||||||||||||||||||| || |||| ||||||||||||||| | | | |||||||||||||||  |||| |||||| ||||| ||    
T  26155131 gagtcccctatttatagaggtggagggctgcatagccgttataatggcacacctggctatggtggttacgaaatcgtgggaagtgtaaccgccagagcgt 26155032  T
Q  166 ttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||||| | || ||||| ||||||| ||||||||||   ||||  ||||||||||||    
T  26155031 ttattgcgggaacgtacaaagagatgttgtggttcgtttgaactaatctctttcgctccgtgca 26154968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 26159224 - 26159154
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggct 94  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||    
T  26159224 gggtttagaggaagagatagattctaccttgggaactgctttgagtcccctatttatagaggtggagggct 26159154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 27347181 - 27347369
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    ||||| ||||||||||  |||||||||||||||||| |  ||| |||| ||| |||||| |||||||||| || || ||||||||||||||||||    |    
T  27347181 ggttttgaggaagaga--gattctaccttggggactgcattgaatcccctatgtatagacgtggagggctacaaagccgttgtaatggcacacctaacac 27347278  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
    |  ||||||||||||| ||  |||| |||| | |   ||||||||||||||||| || | |||||||||| || ||||||||||| |||||    
T  27347279 tgacggttacgaaatcatgggaagtgtaactgcctatgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctc 27347369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 5356529 - 5356630
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||| ||||||||| | || |||| | | |||||||||||  || || ||||| ||||||||||||||| ||   | | ||||||||||||||    
T  5356529 agattctacctcggggactacgaggattcccctttatatagaggtgggtggatggagagttgttgtaatggcacacgtgtgcccaacggttacgaaatcg 5356628  T
Q  142 tg 143  Q
    ||    
T  5356629 tg 5356630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 391468 - 391673
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||| |    
T  391468 gggtttagaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcacacctggct 391567  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||  ||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||    
T  391568 ctggcggttacgaaattatgggaagtgtaaccgccagagagtttattgcgggaacctgcagagagacgttgtggttcgtttgaactagtctcgctcgctc 391667  T
Q  224 cgtgca 229  Q
    ||||||    
T  391668 cgtgca 391673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 380771 - 380975
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  380771 gggtttagaggaagagatagatt-taccatggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggct 380869  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || | ||||||||||| |||| |||| |||||| |||||| |||||||||||||| || ||||||||||||||| ||||||||||| |||||||||||||    
T  380870 ctggaggttacgaaattgtgagaagtgtaaccgccagagactttattgcgggaacgtgtagagagacgttgtggttcgtttgaaccagtctcgctcgctc 380969  T
Q  224 cgtgca 229  Q
    ||||||    
T  380970 cgtgca 380975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 7454857 - 7454652
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||| |    
T  7454857 gggtttacaggaagagatagattctaacttggggactgctatgagtcccctatttatagaggtggaaggctgcagagccgttgtaatggcacacctggct 7454758  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| ||||||||| ||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  7454757 ctggcggttacgaaatcgtgggaagtgtaaccgtcatagagtttattgtgggaacgtgcatagagacgttgtggctcgtatgaaccggtctcgctcgctc 7454658  T
Q  224 cgtgca 229  Q
    ||||||    
T  7454657 cgtgca 7454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 229
Target Start/End: Complemental strand, 18040670 - 18040467
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  18040670 ggtttagaggaagagattgattctaccttggggactgct-tgagtcccctatttatagaggtggagagctgcagagccgttgtaatggcacacctggctc 18040572  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctcc 224  Q
    |  ||||||||||||||||  |||| |||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||  |||||||    
T  18040571 tgacggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgctcc 18040472  T
Q  225 gtgca 229  Q
    |||||    
T  18040471 gtgca 18040467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 32009204 - 32008999
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||  |    
T  32009204 gggtttagaggaagagatagattttaccttggggagtactttgagtcccctatttatagaggtggagggctgtagagccgttgtaatggcacacctgact 32009105  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| ||| ||  |||||| ||||||||||||| |||||||||||| ||||| ||||||||||| |||||  ||||||    
T  32009104 ctggcggttacgaaatcgtgggaagtgtaatcgctagagagattattgcgggaacgtgcagagagacgctgtggttcgtttgaaccagtctctttcgctc 32009005  T
Q  224 cgtgca 229  Q
    ||||||    
T  32009004 cgtgca 32008999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 18574209 - 18574023
Alignment:
Q  26 gtttagaggaagagatagattctacctt---ggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggt 122  Q
    ||||||||||||||||||||||||||||   ||||| | || |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||     
T  18574209 gtttagaggaagagatagattctaccttcttggggaatgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggc 18574110  T
Q  123 tctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaacc 209  Q
    ||| |||||||||||||||||  |||| |||||| |||||||||||||| |||||| |||||||||||||||||| |||||||||||    
T  18574109 tctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgtgggaacgtgcagagagacgttgtggttcgtttgaacc 18574023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 41 - 229
Target Start/End: Complemental strand, 41280983 - 41280796
Alignment:
Q  41 tagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatc 140  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||  ||| | |||||| |||||    
T  41280983 tagattctaccttggggactgttatgagtcccctatttatagaggtggaggactgcagagccgttgtaatggcacacctgactctgggggttacaaaatc 41280884  T
Q  141 gtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||  |||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  41280883 gtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagag-cgttgtggctcgtttgaaccggtcttgctcgctccgtgca 41280796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 7999659 - 7999862
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| | | |||||||||||||||| ||||||   |||||||||| ||||||||| |    
T  7999659 gggtttagaggaagagatagattctaccttggggactgccgtgagtctcctgtttatagaggtggaggactgcagc--cgttgtaatgacacacctggct 7999756  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||  ||||||    
T  7999757 ctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacatgcagagagacgttgtggttcgttggaaccagtctctgtcgctc 7999856  T
Q  224 cgtgca 229  Q
    ||||||    
T  7999857 cgtgca 7999862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 227
Target Start/End: Complemental strand, 2085933 - 2085730
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |    
T  2085933 gggtttagaggaagagatagattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagaaccgttgtaatggcacacctggct 2085834  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||  | |||   ||||||||||||||||||||||||||| |||||| ||||||||||  |||||  ||||||    
T  2085833 ctggcggttacgaaatcgtgggaagtgtaattgccaggtcgtttattgcgggaacatgcagagagacattgtggttcgtttgaactagtctctttcgctc 2085734  T
Q  224 cgtg 227  Q
    ||||    
T  2085733 cgtg 2085730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 24060567 - 24060772
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||| ||||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||| || |    
T  24060567 gggtttagaggaagcgatagattctaccttggagactgctaagagtcccttatatatagaggtggagggctgcagagccgttgtgatggcacaccaggct 24060666  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||| |||||||   |||| |||| | ||||||| ||||||| |||||||||||||||| ||||||| ||||| |||||||||| ||| ||||    
T  24060667 ctggcggttacaaaatcgtaggaagtgtaactgccagagagattattgcaggaacatgcagagagatgttgtggttcgttagaaccggtcttgcttgctc 24060766  T
Q  224 cgtgca 229  Q
    ||||||    
T  24060767 cgtgca 24060772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 24033772 - 24033979
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatag---aggtggagggctgcagagtcgttgtaatggcacacctgg 121  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||    |||||||||| ||||||| |||||||||||||||| ||     
T  24033772 ggtttagaggaagagatagattctacattggggactgctatgagtcccctagttataatataggtggagggttgcagagccgttgtaatggcacacttga 24033871  T
Q  122 ttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgc 221  Q
     | | |||||||||||||||||  |||| |||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||| |  |    
T  24033872 ctttggcggttacgaaatcgtggaaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacattgtggttcgtttgaaccagtctcgttttc 24033971  T
Q  222 tccgtgca 229  Q
    ||||||||    
T  24033972 tccgtgca 24033979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 10532980 - 10532801
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||| ||||||||| ||||||||||||||||| |  | |||||| ||||||||||||||||||||||||||| |||||||||||||||||||  |    
T  10532980 gggtttagatgaagagataaattctaccttggggactccattaagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctgact 10532881  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtt 203  Q
    || |||||||||||||||||  |||| |||||| ||| | ||||||||| ||||| || ||||||||||||||| |||||    
T  10532880 ctggcggttacgaaatcgtggaaagtgtaaccgccagggtgtttattgcaggaacgtggagagagacgttgtggttcgtt 10532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 22609683 - 22609478
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg--cacacctgg 121  Q
    |||||| ||||||||||| ||||||| ||| |||| |  || ||||||| |||  |||||||||||||| |||||||||||||| ||||  |||||||||    
T  22609683 gggttttgaggaagagattgattctatctttgggattgttaagagtcccatat--atagaggtggagggttgcagagtcgttgtgatggtacacacctgg 22609586  T
Q  122 ttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgc 221  Q
     ||| |||||||||||||||||| | || |||||| |||||||||||||||| |||||||||||||||  | |||| |||||||||||  ||||||||||    
T  22609585 ctctggcggttacgaaatcgtgagatgtgtaaccgacagagagtttattgcgtgaacatgcagagagatatcgtggttcgtttgaaccaatctcgctcgc 22609486  T
Q  222 tccgtgca 229  Q
    ||||||||    
T  22609485 tccgtgca 22609478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 33273697 - 33273513
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||     
T  33273697 gggtttagagaaagagatagattctaccttggggactcctatgagtcccctatttatagaggtggagggttgcagagccgttgtaatggcacacttggt- 33273599  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
                   |||||  |||| |||||| || |||  ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  33273598 ---------------tcgtgggaagtgtaaccgccatagaacttattgcgggaacgtgcagagagacgttgtggctcgtttgaaccggtcttgctcgctc 33273514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 210
Target Start/End: Original strand, 11709377 - 11709563
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||| ||||| |||||| |||||||||||  ||||| ||  ||||||| ||| ||||||||||||||| ||||||| ||||||||||||||||| || |    
T  11709377 gggttaagagggagagatcgattctacctttcggactgctgagagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacaccaggct 11709476  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccg 210  Q
    || ||  |||||||||||||  |||| |||||| ||||||| |||||| |||||| |||||||||||||||||| ||||||||||||    
T  11709477 ctggcatttacgaaatcgtgggaagtgtaaccgccagagagattattgtgggaacgtgcagagagacgttgtggttcgtttgaaccg 11709563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 42 - 212
Target Start/End: Original strand, 25820743 - 25820913
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    |||||||||| |||||||| |  |||||||| ||||| |||||||||||||||||| || ||||||||||||||||||   |||  ||||||||||||||    
T  25820743 agattctaccatggggactgcattgagtcccctatttttagaggtggagggctgcaaagccgttgtaatggcacaccttactctgacggttacgaaatcg 25820842  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggt 212  Q
    ||  |||| |||||| | | ||||||||||| ||||| || | |||||||||| || ||||||||| ||||    
T  25820843 tgggaagtgtaaccgcctgtgagtttattgctggaacgtggaaagagacgttggggttcgtttgaatcggt 25820913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 17775717 - 17775753
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggact 60  Q
    |||||||||||||||||||||||||||||||||||||    
T  17775717 gggtttagaggaagagatagattctaccttggggact 17775753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 1788677 - 1788732
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgca 97  Q
    |||||||||||||| |||| |  |||||| | ||||||||||||||||||||||||    
T  1788677 agattctaccttggtgactgcattgagtctcctatttatagaggtggagggctgca 1788732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 10532791 - 10532746
Alignment:
Q  164 gtttattgcgggaacatgcagagagacgttgtggctcgtttgaacc 209  Q
    ||||||||| ||||| || ||||||||||||||| |||||||||||    
T  10532791 gtttattgcaggaacgtggagagagacgttgtggttcgtttgaacc 10532746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 28068214 - 28068009
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  28068214 gggtttagaggaagagagagattctaccttagggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggct 28068115  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||||| | ||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  28068114 ctggcggttacgaaatcgtgggaagtgtaaccgccggagagtttattgcaggaacgtgcagagagacgttgaggctcgtttgaaccagtctcgctcgctc 28068015  T
Q  224 cgtgca 229  Q
    ||||||    
T  28068014 cgtgca 28068009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 15620379 - 15620180
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttcta 126  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||  ||||||||||||||| ||| |||     
T  15620379 tttataggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtgaagggctgtagagctgttgtaatggcacacttggctctg 15620280  T
Q  127 gcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
     |||||||||||| |||  |||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  15620279 acggttacgaaattgtgggaagtgtaaccgccagagagtttattgtgggaacgtgcagagagacgttgtggctcgtttgaacccgtctcgctcgctccgt 15620180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 22922829 - 22922633
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||| ||||| ||||||| || ||||||||| |    
T  22922829 gggtttagaggaagagatagattctaccttggggattgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtgacacacctggct 22922730  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcg 220  Q
    ||||||||||||||||||||  |||| |||||| ||||||||||||||| | ||||| |||||||| ||||||| |||||||||| |||||||||||    
T  22922729 ctagcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgctgaaacatacagagagaggttgtggttcgtttgaacaggtctcgctcg 22922633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 5931199 - 5931404
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| |||||||||||||| ||||||||||    |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  5931199 gggtttagagggagagatagattctatcttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatgacacacctggtt 5931298  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||| |||||||||  ||||  ||||| ||||||||||||||||||||  || ||||||||||||||| ||||||||||| |||||  ||||||    
T  5931299 ctggcggttatgaaatcgtgggaagtgcaaccgccagagagtttattgcgggaatgtgtagagagacgttgtggttcgtttgaaccagtctctatcgctc 5931398  T
Q  224 cgtgca 229  Q
    ||||||    
T  5931399 cgtgca 5931404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 42792490 - 42792695
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||   |||||||||||||||||||||| |  |||||||||| || ||||||||||||||||||||||||  |||||| |||||||||||| |    
T  42792490 gggtttagagagggagatagattctaccttggggattgttatgagtcccctagttatagaggtggagggctgcagagcagttgtagtggcacacctggct 42792589  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| ||||||  |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||    
T  42792590 ctggcggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcgggaacgtgcagagatacgttgtgactcgtttgaaccggtctcgcttgctc 42792689  T
Q  224 cgtgca 229  Q
     |||||    
T  42792690 tgtgca 42792695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 23495362 - 23495562
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttcta 126  Q
    ||||||||||||||  |||||||| ||||||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||   |||     
T  23495362 tttagaggaagaga--gattctacattggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctg 23495459  T
Q  127 gcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
     ||||||||||||||||  |||| |||||||| | ||||||||||||||||| || | |||||||||| || |||||||||||||||||  ||| |||||    
T  23495460 acggttacgaaatcgtgggaagtgtaaccgtctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccggtctctttcgttccgt 23495559  T
Q  227 gca 229  Q
    |||    
T  23495560 gca 23495562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 41037845 - 41037631
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttataga---------ggtggagggctgcagagtcgttgtaatggca 114  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||         ||||||||||||| ||| |||||||||||||    
T  41037845 gggtttagaggaagagatatattctaccttggggactgctatgagtcccctatttatagaatttatagaggtggagggctgcggagccgttgtaatggca 41037746  T
Q  115 cacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtct 214  Q
    ||||||| ||| |||||||||||||||||  |||| |||||| |||||||||||||||| |||| |||||| ||| ||| | | || |||||||| ||||    
T  41037745 cacctggctctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgtgaacgtgcagacagatgttatcgttcatttgaaccagtct 41037646  T
Q  215 cgctcgctccgtgca 229  Q
    |||| ||| ||||||    
T  41037645 cgcttgcttcgtgca 41037631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 8244520 - 8244730
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcac------ac 117  Q
    |||||| |||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||||||| ||| |||||||      ||    
T  8244520 gggttttgaggaagagatagattctaccttgaggactgatgtgagtcccttatttatagaggtggagggctgcagagtcg-tgtgatggcacatcattac 8244618  T
Q  118 ctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgc 217  Q
     ||| ||| |||||||||||||||||  |||| ||| ||  ||||||||||||| |||||| |||| ||||||||||||| ||||||||||| |||||      
T  8244619 atggctctggcggttacgaaatcgtggaaagtgtaatcgctagagagtttattgggggaacgtgcaaagagacgttgtggttcgtttgaaccagtctctt 8244718  T
Q  218 tcgctccgtgca 229  Q
    ||||||||||||    
T  8244719 tcgctccgtgca 8244730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 206
Target Start/End: Complemental strand, 22922232 - 22922050
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||| ||||| ||||||| || ||||||||| |    
T  22922232 gggtttagaggaagagatagattctaccttgggaactgttatgagtcccctatttatagaggtggagggctacagagccgttgtagtgacacacctggct 22922133  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttga 206  Q
    || | |||||| ||||||||  |||| |||||| |||| |||||||| | | ||| | |||||||||||||||| ||||||||    
T  22922132 ctggtggttacaaaatcgtgggaagtgtaaccgccagaaagtttattcctgaaacgtacagagagacgttgtggttcgtttga 22922050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 20899796 - 20899582
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||||||| |  ||||| |||||||||||| |  |||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  20899796 cagagagtgagggttttagaggaagaaa--gattcaaccttggggactgcattgagtcccctatttataaaggtggagggctgcagattcgttgtaatgg 20899699  T
Q  113 cacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggt 212  Q
    |||||||   |||  ||||||||||||||||  |||| |||||| | | ||||||||||||||||| || | |||||||||| || ||||||||||| ||    
T  20899698 cacacctaactctgacggttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagt 20899599  T
Q  213 ctcgctcgctccgtgca 229  Q
    |||  ||| ||||||||    
T  20899598 ctctttcgttccgtgca 20899582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 19330052 - 19329910
Alignment:
Q  87 ggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagag 186  Q
    |||||||| ||||| | |||||||||||||||  | ||| |||||||||||||||||  |||| |||||| ||||||| |||||||||||||||||||||    
T  19330052 ggagggctacagagccattgtaatggcacaccaagctctggcggttacgaaatcgtgggaagtgtaaccgccagagagattattgcgggaacatgcagag 19329953  T
Q  187 agacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
      |||||||||||||||||||||||||| |||  |||||||||    
T  19329952 taacgttgtggctcgtttgaaccggtcttgctttctccgtgca 19329910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 36712822 - 36712635
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||   |||  ||||||||||||||    
T  36712822 agattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctaactctgacggttacgaaatcg 36712723  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||  |||| |||||  | | || ||||||||| |||| || | |||||||||| || ||||||||||  |||||  ||| ||||||||    
T  36712722 tggaaagtgtaaccacctgcgattttattgcgagaacgtggaaagagacgttggggttcgtttgaactagtctctttcgttccgtgca 36712635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 215
Target Start/End: Complemental strand, 5590870 - 5590697
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||||| |  ||| |||| |||||||||||||||||||| |||||| ||||||||||||||||||   |||  |||||||||||| |    
T  5590870 agattctaccttggggactgcattgaatcccctatttatagaggtggagggcagcagagccgttgtaatggcacaccttactctgacggttacgaaattg 5590771  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
    ||  |||| |||||| | | ||||||||||||||||  || | |||||||||| || ||||||||||| |||||    
T  5590770 tgggaagtgtaaccgcctgcgagtttattgcgggaatgtggaaagagacgttggggttcgtttgaaccagtctc 5590697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 38608266 - 38608437
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||| ||| | |||||||||||| |||||| |  |||||||| |||||||||||||||||| || ||||| ||||||   ||    
T  38608266 cagagagtgagggttttagagggagaaa-agattctaccttagggactgcattgagtcccctatttatagaggtggaggtctacagagccgttgtggagg 38608364  T
Q  113 cacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcaga 185  Q
    ||||||||| ||| |||||||||||||||||  |||| |||||| || |||||||||||||||||| ||||||    
T  38608365 cacacctggctctggcggttacgaaatcgtgggaagtgtaaccgccaaagagtttattgcgggaacgtgcaga 38608437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 215
Target Start/End: Complemental strand, 33622664 - 33622490
Alignment:
Q  44 attctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttct---agcggttacgaaatc 140  Q
    |||||| ||| |||||| |  |||||||| ||||||||||||||||||||||||||| |||||||||  |||||||   |||    | ||||||||||||    
T  33622664 attctatcttagggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaattacacaccttactctgacggtggttacgaaatc 33622565  T
Q  141 gtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
     ||  |||| |||||| | | ||||||||||| ||||| |  | |||||||||| || |||||| |||| |||||    
T  33622564 ctgggaagtgtaaccgcctgtgagtttattgctggaacgtagaaagagacgttggggttcgtttaaaccagtctc 33622490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 24095343 - 24095406
Alignment:
Q  166 ttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||||| |||| |||||||||| || | |||||||||||||||||| ||||||||||    
T  24095343 ttattgcgggaacgtgcaaagagacgttggggtttgtttgaaccggtctcgcttgctccgtgca 24095406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 22510097 - 22510195
Alignment:
Q  131 ttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||||||||||  |||| |||||| | | |||||||||||||||||||| | ||||||||||  | |||||| |||| |||||  ||| ||||||||    
T  22510097 ttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgcgggaacatggaaagagacgttggagttcgttttaaccagtctctttcgttccgtgca 22510195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 19330083 - 19330051
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggg 56  Q
    |||||||||||||||||||||||||||||||||    
T  19330083 gggtttagaggaagagatagattctaccttggg 19330051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 47606 - 47401
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |    
T  47606 gggtttagaggaagagatagattctaccttggggactgctttgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacttggct 47507  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||| |||| |||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||  ||||||    
T  47506 ctggcggttacaaaattgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgctc 47407  T
Q  224 cgtgca 229  Q
    ||||||    
T  47406 cgtgca 47401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 29164858 - 29165063
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||  |    
T  29164858 gggtttagaggaagagatagattctaccttggggactgctatgagtcccctatttatagaggtggacggctgcagagccgttgtaatgacacacctgact 29164957  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||  ||||||||||||||  |||| |||| |  |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||    
T  29164958 ctagaagttacgaaatcgtgggaagtgtaactgctagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtctcgttcgctc 29165057  T
Q  224 cgtgca 229  Q
    ||||||    
T  29165058 cgtgca 29165063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 9549159 - 9548959
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||| | |||||| |||||||||||||||||| |||||||  ||||||||||| |    
T  9549159 gggtttagaggaagagatagattttaccttggggactactttgagtcccctttttataaaggtggagggctgcagagccgttgtagaggcacacctggct 9549060  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||||||||||||||||||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||| ||||    
T  9549059 ctagcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtgtttcgtttgaaccagtctcgcttgctc 9548960  T
Q  224 c 224  Q
    |    
T  9548959 c 9548959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 30770377 - 30770173
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| |    
T  30770377 gggtttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcagagccgttgtaatggcacacctggct 30770278  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||| | || |||||||||||||||||| || ||||||||||||| | ||||||||||| ||| |  ||||||    
T  30770277 ctggcggttacgaaatcgtggaaagtgtaactgccaaagagtttattgcgggaacgtgtagagagacgttgt-gttcgtttgaaccagtccctttcgctc 30770179  T
Q  224 cgtgca 229  Q
    ||||||    
T  30770178 cgtgca 30770173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 20093545 - 20093750
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||| |||| |||||||| |||||||||||||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||      
T  20093545 gggtttggagggagagatagtttctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggcc 20093644  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||||||||||||||||||  |||| |||||  || |||| ||||||||||||  |||||||||||||||||| ||||||||||| |||||  ||||||    
T  20093645 ctagcggttacgaaatcgtgggaagtgtaaccaccaaagagcttattgcgggaatgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctc 20093744  T
Q  224 cgtgca 229  Q
    ||||||    
T  20093745 cgtgca 20093750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 21802459 - 21802664
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| |    
T  21802459 gggtttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggttgagggctacagagccgttgtaatggcacacctggct 21802558  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || | ||||||||||||||   |||| |||| |  ||||||||||||||| |||| |||||||||||||||||| |||| |||||| |||||  ||||||    
T  21802559 ctggtggttacgaaatcgtaggaagtgtaacagcgagagagtttattgcgagaacctgcagagagacgttgtggttcgtctgaaccagtctccttcgctc 21802658  T
Q  224 cgtgca 229  Q
    ||||||    
T  21802659 cgtgca 21802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 7595360 - 7595563
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    |||||| |||||||||||||||||||||||||  ||   |||| |||| |||||||||||||||||||||||| || ||||||||| ||||||||||  |    
T  7595360 ggtttaaaggaagagatagattctaccttgggt-ctgtcatgattcccctatttatagaggtggagggctgcaaagccgttgtaatagcacacctggcgc 7595458  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctcc 224  Q
    | |  ||||||||||||||  |||| |||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  7595459 tggatgttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacattgtggttcgtttgaaccggtctcgctcgctcc 7595558  T
Q  225 gtgca 229  Q
    |||||    
T  7595559 gtgca 7595563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 229
Target Start/End: Complemental strand, 2250179 - 2249977
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttcta 126  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||||||| || | |     
T  2250179 tttagaggaagagatagattctacattggggtttgctatgagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacaccaggctttg 2250080  T
Q  127 gcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
    |||||||| ||||||||  || | ||||||  |||||  ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  2250079 gcggttacaaaatcgtgggaattgtaaccgctagagatattattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtcttgcttgctccgt 2249980  T
Q  227 gca 229  Q
    |||    
T  2249979 gca 2249977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 22705614 - 22705813
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||       | |||||||| |||||||||||||||||| |||||||| | |||||||||||||||||| |    
T  22705614 gggtttagaggaagagatagattctaccttggt------tgtgagtcccgtatttatagaggtggaggactgcagagccattgtaatggcacacctggct 22705707  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||| ||  |||| ||||||  ||||| |||||||| ||||| |||||||| ||||||||| ||||||||||  |||||  ||||||    
T  22705708 ctggcggttacgaaatcatgggaagtgtaaccggtagagaatttattgcaggaacgtgcagagaaacgttgtggttcgtttgaactagtctctttcgctc 22705807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 22703905 - 22704006
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22703905 gggtttagaggacgagatagattctaccttggggactgctgtgagtcccatatttatagaggtggagggctgcagagccgttgtaatggcacacctggtt 22704004  T
Q  124 ct 125  Q
    ||    
T  22704005 ct 22704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 47295854 - 47295667
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||   |||  ||||||||||||||    
T  47295854 agattctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaaatcg 47295755  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||  |||| ||| ||   | ||||||||||||||||  || |||||||||||| || ||||||||||| |||||  ||| ||||||||    
T  47295754 tgggaagtgtaaacgcttgtgagtttattgcgggaaggtggagagagacgttggggttcgtttgaaccagtctccttcgttccgtgca 47295667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 18153155 - 18153328
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||| | |  |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||   |||  |||||||||||| |    
T  18153155 agattctaccttggggaatgcattgagtcccctatttatagaggtggagggctgccgagtcgttgtaatggcacagcttactctgacggttacgaaatgg 18153254  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
    ||  |||| |||||| | | |||||||||| |||||| || | |||||||||| || ||||||||||| |||||    
T  18153255 tgggaagtgtaaccgcctgcgagtttattgtgggaacgtggaaagagacgttggggttcgtttgaaccagtctc 18153328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 21593077 - 21592863
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||||||| |  | |||||||||||||||| |  |||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  21593077 cagagagtgagggttttagaggaagaaa--gcttctaccttggggactgcattgagtcccctatttatagaggtggagggctgctgagccgttgtaatgg 21592980  T
Q  113 cacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggt 212  Q
    |||||||   |||  ||||||| ||||||||  |||| |||||||| |  || ||||| ||||||| || | |||||||||| || ||||||||||| ||    
T  21592979 cacaccttactctgacggttacaaaatcgtgggaagtgtaaccgtctgttagcttattacgggaacgtggaaagagacgttggggttcgtttgaaccagt 21592880  T
Q  213 ctcgctcgctccgtgca 229  Q
    |||  ||| ||||||||    
T  21592879 ctctttcgttccgtgca 21592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 229
Target Start/End: Original strand, 38612620 - 38612771
Alignment:
Q  78 tatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaa 177  Q
    |||||||||||||  |||||||| ||||||||||| ||||| || ||| |||||||| ||||||||  |||| |||| | ||||||| |||||| |||||    
T  38612620 tatagaggtggagatctgcagagccgttgtaatggtacaccaggctctggcggttacaaaatcgtgggaagtgtaactgccagagagattattgtgggaa 38612719  T
Q  178 catgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    | ||||||| |||||||||| ||||||||||||| |  ||| ||||||||||    
T  38612720 cgtgcagagggacgttgtggttcgtttgaaccggccctgcttgctccgtgca 38612771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 18185651 - 18185824
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    |||||||||  |||||||| |  |||||||| |||| ||| | |||||||||||||||| |||| ||| |||||||||   |||  ||||||||||||||    
T  18185651 agattctacgctggggactgcattgagtcccctattaataaatgtggagggctgcagagccgttttaacggcacaccttactctgacggttacgaaatcg 18185750  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
     |  |||| ||||||   | |||||||||||||||||||| | |||||||||| || ||||||||||| |||||    
T  18185751 cgggaagtgtaaccgcttgcgagtttattgcgggaacatggaaagagacgttggggttcgtttgaaccagtctc 18185824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 28794217 - 28794078
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| ||| |||||||||||||||||||||  || ||||||| ||| |||| |||||   ||||||| || |||||||||||||||| ||  |    
T  28794217 gggtttagagggaga-atagattctaccttggggactgttaagagtcccctatatataaaggtgagtggctgcatagccgttgtaatggcacacgtgtgt 28794119  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagag 164  Q
    ||  ||||||||||||||||  |||| |||||| |||||||    
T  28794118 ctgacggttacgaaatcgtgggaagtgtaaccgccagagag 28794078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 21801909 - 21801836
Alignment:
Q  151 taaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctcc 224  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||    
T  21801909 taaccgccagagaacttattgcgggaacgtgcagagagacgttgtggttcgtttgaatcggtcttgctcgctcc 21801836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 30765114 - 30764986
Alignment:
Q  81 agaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacat 180  Q
    ||||||||||||||||||||  |||||| |||||||||| | ||   ||| ||||||||||||  |||| |||||| ||||||  | ||||||||||  |    
T  30765114 agaggtggagggctgcagagctgttgtagtggcacacctaggtccgacgggtacgaaatcgtgggaagtgtaaccgccagagaaataattgcgggaatgt 30765015  T
Q  181 gcagagagacgttgtggctcgtttgaacc 209  Q
    ||| |||||| |||||| ||| |||||||    
T  30765014 gcaaagagacattgtggttcgcttgaacc 30764986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 1231 - 1026
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||| |||| |||| || |||||||| ||||||||||||||||||||| || || ||||||||||| |||||||| |    
T  1231 gggtttagaggaagagatagattctacgttggagactgctgtgagtcccctatttatagaggtggagggctacatagccgttgtaatggaacacctggct 1132  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    |||||| |||||||||||||  |||| |||||| || |||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  1131 ctagcgattacgaaatcgtgggaagtgtaaccgccatagagtttattgcaggaacatgcagagaaacgttgtggttcgtttgaaccagtctcgctcgctc 1032  T
Q  224 cgtgca 229  Q
    ||||||    
T  1031 cgtgca 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 12885289 - 12885494
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||| |||||||| |||||||||||||||||| | |||||||||||||||||| |    
T  12885289 gggtttagaggaagagatagattctaccttggggactgttgtgagtcccctatttataaaggtggagggctgcagagccattgtaatggcacacctggct 12885388  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||||  ||||||    
T  12885389 ctggcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcaaagagacgttgtggttcgtttgaaccagtctctttcgctc 12885488  T
Q  224 cgtgca 229  Q
    | ||||    
T  12885489 catgca 12885494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 10985903 - 10985699
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||| ||||||||| |||||||||||||||| ||| |  |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||| |    
T  10985903 gggtttggaggaagaggtagattctaccttggg-actgccgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggcacacctggct 10985805  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||  |||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||    
T  10985804 ctcgcggttacgaaatcgtgggaagtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtctcgttcgctc 10985705  T
Q  224 cgtgca 229  Q
     |||||    
T  10985704 tgtgca 10985699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 3268343 - 3268548
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| |||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||||||||| | |||||||| ||||||||| |    
T  3268343 gggtttagagggagagatagattctaccttggagacttccgtgagtcccctatttatagaggtggagggctgcagagccattgtaatgacacacctggct 3268442  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||||| |||||||  |||| |||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||  ||||||    
T  3268443 ctggcggttacgtaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctc 3268542  T
Q  224 cgtgca 229  Q
    ||||||    
T  3268543 cgtgca 3268548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 3270555 - 3270760
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| |||||||||| |||||||||||||| |  |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  3270555 gggtttagagggagagatagatcctaccttggggactgccgtgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacacctggct 3270654  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || | |||||||||||||||  |||| ||||||  |||||||||||||||||||| || || |||||||||||| ||||||||||| |||||  | ||||    
T  3270655 ctggtggttacgaaatcgtgggaagtgtaaccgctagagagtttattgcgggaacgtgtagtgagacgttgtggttcgtttgaaccagtctctgttgctc 3270754  T
Q  224 cgtgca 229  Q
    ||||||    
T  3270755 cgtgca 3270760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 12217570 - 12217769
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| |||||||||||||||||||||||||    |||||||| ||||||||||||||||||||||||||| ||||||||      |||||| |    
T  12217570 gggtttagagggagagatagattctaccttggggactgtcgtgagtcccctatttatagaggtggagggctgcagagccgttgtaa------acctggct 12217663  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||||||||||||   |||| |||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||  ||||||    
T  12217664 ctggcggttacgaaatcgtaggaagtgtaaccgccagagagtttattgcaggaacgtgcagagagacgttgtggttcgtttgaaccagtctctgtcgctc 12217763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 229
Target Start/End: Complemental strand, 21332728 - 21332530
Alignment:
Q  31 gaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcgg 130  Q
    |||||||||||||||||||||||||  ||| || |||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| |||     
T  21332728 gaggaagagatagattctaccttggaaactgctttgagtcccctatttacagaggtggagggctgcagagccgttgtagtggcacacctggctctggcgc 21332629  T
Q  131 ttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||||||| ||  ||||||||||| |||| ||||||||| |||||| || ||||||||||||||| ||||||||||| |||||  |||||| |||||    
T  21332628 ttacgaaatcatgggaagtataaccgccagaaagtttattgtgggaacgtgtagagagacgttgtggttcgtttgaaccagtctctttcgctctgtgca 21332530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 9901892 - 9901687
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||| ||||| ||| || | |||||||||| ||||| ||| ||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||| |    
T  9901892 gggttaagagggagatatcggttctaccttgaggactgctaagagtcccctatatatagaggtggagggttgcagagccgttgtaatggcacacctggct 9901793  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||  ||||||||||||||||  | || ||||||  |||||| ||||||||||||  | |||||||||||||||| || ||||||||| ||| ||||||||    
T  9901792 ctgacggttacgaaatcgtgggacgtgtaaccgctagagagattattgcgggaatgtccagagagacgttgtggttcatttgaaccgatctagctcgctc 9901693  T
Q  224 cgtgca 229  Q
    ||||||    
T  9901692 cgtgca 9901687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 229
Target Start/End: Original strand, 49402707 - 49402908
Alignment:
Q  30 agaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcg 129  Q
    ||||| ||| ||| ||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || ||| |||    
T  49402707 agagggagatatatattctactttggggactgctatgagtcccctatatatagaggtggagggctgcagagccgttgtaatggcacaccaggctctggcg 49402806  T
Q  130 gttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgc--agagagacgttgtggctcgtttgaaccggtctcgctcgctccgtg 227  Q
    ||||||| ||||||  |||| |||||| || |||| ||||||||| ||| |||  ||||||||||||| |  ||||||||||||||| ||| |||| |||    
T  49402807 gttacgagatcgtggaaagtgtaaccgccatagagattattgcggaaacgtgcagagagagacgttgtagtccgtttgaaccggtcttgcttgctctgtg 49402906  T
Q  228 ca 229  Q
    ||    
T  49402907 ca 49402908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 8082054 - 8082258
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||| ||||| |||||||||| ||||||||| ||| ||||||| ||| |||||||||||||| |||||||| | |||||||||||||||||| |    
T  8082054 gggtttagagaaagag-tagattctacattggggactgctaagagtcccctatatatagaggtggaggactgcagagccattgtaatggcacacctgggt 8082152  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    | | | ||||||||||||||  |||| |||||| ||||||  | ||||||||||| |||| | ||| ||| |||||||||||||||||||  ||| ||||    
T  8082153 ccaacagttacgaaatcgtggaaagtgtaaccgccagagaaataattgcgggaacgtgcaaatagatgttatggctcgtttgaaccggtcctgcttgctc 8082252  T
Q  224 cgtgca 229  Q
    ||||||    
T  8082253 cgtgca 8082258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 45313156 - 45313360
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagt-cccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggt 122  Q
    |||||||| | ||||| ||||||||||||||||||||  ||||||| |||||||  |||||||| ||||| |||| |  ||||||||||||||||| ||     
T  45313156 gggtttagtgaaagagttagattctaccttggggactgttatgagttcccttat--atagaggtagagggttgcaaatccgttgtaatggcacaccaggc 45313253  T
Q  123 tctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtc-tcgctcgc 221  Q
    ||| |||||||||||||||||  |||| |||||| ||||||| |||||| |||||| |||||||||||||||| | ||||||||||| ||| | ||||||    
T  45313254 tctggcggttacgaaatcgtgggaagtgtaaccgccagagagattattg-gggaacgtgcagagagacgttgtagttcgtttgaaccagtctttgctcgc 45313352  T
Q  222 tccgtgca 229  Q
    ||||||||    
T  45313353 tccgtgca 45313360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 211
Target Start/End: Complemental strand, 26781000 - 26780819
Alignment:
Q  30 agaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcg 129  Q
    |||| ||||| ||||||||||||||||||||  ||||| |||| |||  | |||||||||||||||||||| |||||||||| |||||| |  ||| | |    
T  26781000 agagaaagagttagattctaccttggggactgttatgactcccctatacagagaggtggagggctgcagagccgttgtaatgacacaccagactctggtg 26780901  T
Q  130 gttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccgg 211  Q
    ||||||||| ||||  |||| |||||| ||||||| ||||||||||||| |||||||| ||||||||| |||||||| ||||    
T  26780900 gttacgaaaacgtgggaagtgtaaccgccagagagattattgcgggaacgtgcagagaaacgttgtggttcgtttgagccgg 26780819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 13861340 - 13861527
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||||| |  ||||| || |||||||||||||||||||||||| || ||||||||||||||||||   |||| | ||||||||||||    
T  13861340 agattctaccttggggactgcattgagttccctatttatagaggtggagggctgcaaagccgttgtaatggcacaccttactctaacagttacgaaatcg 13861439  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||  |||| |||| | | | ||||||||||||||||| || | |||||||||| || |||||||||||||| ||  ||| ||||||||    
T  13861440 tgggaagtgtaactgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccggtatctttcgttccgtgca 13861527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 25239721 - 25239908
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||||| |  | |||||| ||||||||||||||||||||||||||| ||||||||||||||||||   |||  |||||||||||| |    
T  25239721 agattctaccttggggactgcatttagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaaattg 25239820  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||  |||| |||||| | | ||||||||||||||||| || | |||||| ||| || ||||||||||| |||||  ||| ||||||||    
T  25239821 tgggaagtgtaaccgcctgtgagtttattgcgggaacgtggaaagagactttggggttcgtttgaaccagtctctttcgttccgtgca 25239908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 17282660 - 17282476
Alignment:
Q  45 ttctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtga 144  Q
    |||||||||||||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||   |||  |||||||||| |||||     
T  17282660 ttctaccttggggactgcattgagtcccctatttatagaggtggagggctgcagagccgttgtaatggcacaccttactctgacggttacgaattcgtgg 17282561  T
Q  145 taagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
     |||| ||||||   | | ||||||||||||||| || | |||||||||| || ||||| ||||| |||||  ||| ||||||||    
T  17282560 gaagtgtaaccgcttgtgggtttattgcgggaacgtggaaagagacgttggggttcgttagaaccagtctctttcgttccgtgca 17282476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 28891919 - 28892126
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    |||||||||||||| |||||||||||||||||||||  || ||||||| ||| ||||||||||||| |||||| || ||||||||||||||| |||| ||    
T  28891919 ggtttagaggaaga-atagattctaccttggggactcttaagagtcccctatatatagaggtggagagctgcatagccgttgtaatggcacatctgggtc 28892017  T
Q  125 ----tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcg 220  Q
        | || ||| ||||||||||  |||| |||||  ||||||  | |||| || ||| |||| ||||||||||||| |||||||||| ||||| ||| |    
T  28892018 cggttggcagttgcgaaatcgtgggaagtgtaaccaccagagaaataattgtggaaacgtgcaaagagacgttgtggttcgtttgaacaggtcttgcttg 28892117  T
Q  221 ctccgtgca 229  Q
    |||||||||    
T  28892118 ctccgtgca 28892126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 16396389 - 16396252
Alignment:
Q  92 gctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacg 191  Q
    ||||||||| ||||||| |||||||||||  ||| ||| ||| |||||| ||  |||| |||||| ||||| ||||||||||||||| || |||||||||    
T  16396389 gctgcagagccgttgtagtggcacacctgactctggcgattaggaaatcatgggaagtgtaaccgccagagtgtttattgcgggaacgtgtagagagacg 16396290  T
Q  192 ttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||| ||| ||||||| |||||||| ||||||||||    
T  16396289 ttgtggttcgcttgaaccagtctcgcttgctccgtgca 16396252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 208
Target Start/End: Original strand, 15455466 - 15455633
Alignment:
Q  41 tagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatc 140  Q
    |||||||||||||||||||| ||| |||||   ||| ||||||||||||||| |||| ||||||||| | ||||||||||  | | ||||||| |||||     
T  15455466 tagattctaccttggggactgctaagagtcttatatatatagaggtggagggatgcaaagtcgttgtgaaggcacacctgtgtttggcggttatgaaata 15455565  T
Q  141 gtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaac 208  Q
     ||  |||| ||| ||  |||||  | ||||| | ||| |||| ||||||||||||||||||||||||    
T  15455566 atgggaagtgtaaacgcaagagaaataattgcagaaacgtgcaaagagacgttgtggctcgtttgaac 15455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 34845635 - 34845516
Alignment:
Q  37 gagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacga 136  Q
    |||| ||||||||||||||||||| | | ||| ||| | | |||||||||||  |  |||||||||||||||||||||||| ||  |||  |||||||||    
T  34845635 gagagagattctaccttggggactgcgaggagccccctttatatagaggtgggtgaatgcagagtcgttgtaatggcacacatgtgtctgacggttacga 34845536  T
Q  137 aatcgtgataagtataaccg 156  Q
    |||||||  |||| ||||||    
T  34845535 aatcgtgggaagtgtaaccg 34845516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 15427832 - 15427893
Alignment:
Q  168 attgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||| |||| ||| ||||||||||||||  |||| ||||||||| ||||||||||    
T  15427832 attgcgggaacgtgcaaagaaacgttgtggctcgtaggaactggtctcgcttgctccgtgca 15427893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 15434450 - 15434511
Alignment:
Q  168 attgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||| |||| ||| ||||||||||||||  |||| ||||||||| ||||||||||    
T  15434450 attgcgggaacgtgcaaagaaacgttgtggctcgtaggaactggtctcgcttgctccgtgca 15434511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 18284715 - 18284661
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttat 80  Q
    |||||||||||||||||  |||||||||||||||||| |  |||||||| |||||||    
T  18284715 gggtttagaggaagaga--gattctaccttggggactgcattgagtcccctatttat 18284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 8990952 - 8990747
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||| ||||||||||| |||||||| |  |||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||| |    
T  8990952 gggtttagaggaagagttagattctaccgtggggactgcagtgagtcccctatttacagaggtggagggctgtagagccgttgtaatggcacacctggct 8990853  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||||||||||||||||||  |||| |||| |||||||||||||||| | |||| |||||||||||||||||||| | ||||||||||||||||| |||    
T  8990852 ctagcggttacgaaatcgtgggaagtgtaactgtcagagagtttattgtgagaacgtgcagagagacgttgtggcttgcttgaaccggtctcgctcactc 8990753  T
Q  224 cgtgca 229  Q
    ||||||    
T  8990752 cgtgca 8990747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 8995628 - 8995424
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||| |||||||||||||||||| | |  |||||||| ||||||||||||||||||||||||||| ||||| | || ||||||| | |    
T  8995628 gggtttagaggaagagttagattctaccttggggaatgcagtgagtcccctatttatagaggtggagggctgcagagccgttg-attgacacacctagct 8995530  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||||||||||||||||||  |||| |||||| || |||||||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||    
T  8995529 ctagcggttacgaaatcgtgggaagtgtaaccgccatagagtttattgcgggaacgtgctgagagacgttgtggcttgcttgaaccggtctcgctcgctc 8995430  T
Q  224 cgtgca 229  Q
    ||||||    
T  8995429 cgtgca 8995424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 19967609 - 19967404
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||||| ||||||||||| |||||| || |||||||| ||||||||||||||||||| |||| |  |||||||||| ||||||||| |    
T  19967609 gggtttagaggaagagatggattctaccttagggactgctttgagtcccctatttatagaggtggagggttgcataaccgttgtaatgacacacctggct 19967510  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||||||||||||    || |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||  ||||||    
T  19967509 ctggcggttacgaaatcgtgggtggtgtaaccgccagagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaaccagtctctttcgctc 19967410  T
Q  224 cgtgca 229  Q
    ||||||    
T  19967409 cgtgca 19967404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 225
Target Start/End: Complemental strand, 19442301 - 19442100
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||||| || |||||||||| |||| |||  |    
T  19442301 gggtttagaggaagagatagattctaccttggggactgctgtgagtcccctatttatagaggtggagtgctgcaaagccgttgtaatgacacatctgact 19442202  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||||||||||| |  ||||||||||| |||||||||||||| |||||| || ||||||||||||||| ||| ||||||| |||||  ||||||    
T  19442201 ctggcggttacgaaatcgggggaagtataaccgccagagagtttattgtgggaacgtgtagagagacgttgtggttcgattgaaccagtctctttcgctc 19442102  T
Q  224 cg 225  Q
    ||    
T  19442101 cg 19442100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 38621812 - 38622015
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||  ||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||| |||||||||||||||  ||| |    
T  38621812 gggtttagaggaagagtgagattctaccttggggactgcagtgagtcccttatatatagaggtggagggctgcagagccgttgtaatggcacatttggct 38621911  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || | |||||||||||||||  |||| |||| | || | | |||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||    
T  38621912 ctggtggttacgaaatcgtggaaagtgtaactgccaaacaatttattgcgggaacgtgcagagagacgttgtggttcgttttaaccgatctcgctcgctc 38622011  T
Q  224 cgtg 227  Q
    ||||    
T  38622012 cgtg 38622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 9858976 - 9859185
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg----cacacct 119  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||  | |    ||||| |    
T  9858976 gggtttagatgaagagatatattctaccttggggactgctatgagtcccctatttatagaggtggagggctgcagagccgttgtggttgcacacacactt 9859075  T
Q  120 ggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctc 219  Q
    || |||  ||||||||||||||||  |||| |||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||  ||||| |||    
T  9859076 ggctctgacggttacgaaatcgtgggaagtgtaaccgccaaagagtttattgcgggaacgtgcagagagacgttgtggttcgtttgaacgagtctcactc 9859175  T
Q  220 gctccgtgca 229  Q
    |||| |||||    
T  9859176 gctctgtgca 9859185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 24974086 - 24973886
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| ||||||||||||||  ||||||||||||| |||| |  |||||||| ||||||||||| | ||||||||||||| |||||||||||    
T  24974086 cagagagtgagggttttagaggaagaga--gattctaccttggtgactgcattgagtcccctatttatagagttagagggctgcagagccgttgtaatgg 24973989  T
Q  113 cacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggt 212  Q
    |||||||   |||  ||||||||||||||||  |||| |||||| | | |||||||||| |||||  |  | |||||||||| || ||||||||||||||    
T  24973988 cacacctaactctgacggttacgaaatcgtgggaagtgtaaccgcctgtgagtttattgtgggaatgttgaaagagacgttgaggttcgtttgaaccggt 24973889  T
Q  213 ctc 215  Q
    |||    
T  24973888 ctc 24973886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 21817938 - 21817724
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||||||| |  |||||||||||||||||| |  |||||||| |||||||| ||||||| ||| |||||| |||||||||||    
T  21817938 cagagagtgagggttttagaggaagaaa--gattctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatgg 21817841  T
Q  113 cacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggt 212  Q
    |||||||   |||  ||||||||||||||||  |||| |||| | | | ||||||||||||||||| || | ||||||| || || |||||||||||| |    
T  21817840 cacacctaactctgacggttacgaaatcgtgggaagtgtaacagcctgtgagtttattgcgggaacgtggaaagagacgctggggttcgtttgaaccgat 21817741  T
Q  213 ctcgctcgctccgtgca 229  Q
    |||  ||| ||||||||    
T  21817740 ctctttcgttccgtgca 21817724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 22186159 - 22186082
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacct 119  Q
    ||||||||||||||||||| || | |||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  22186159 agattctaccttggggactgctttaagtcccctatttatagaggtggatggctgcagagccgttgtaatggcacacct 22186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 21815723 - 21815619
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||||||| |  ||||||||||||| |||| |  |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  21815723 cagagagtaagggttttagaggaagaaa--gattctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatgg 21815626  T
Q  113 cacacct 119  Q
    |||||||    
T  21815625 cacacct 21815619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 21815609 - 21815542
Alignment:
Q  162 gagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||||||||| || | |||||||||| || ||||||||||| |||||  ||| ||||||||    
T  21815609 gagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgca 21815542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 49472350 - 49472417
Alignment:
Q  162 gagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||||||||| || | |||||||||| || || ||||||||||||||  ||| ||||||||    
T  49472350 gagtttattgcgggaacgtggaaagagacgttggggttcatttgaaccggtctctttcgttccgtgca 49472417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 33028929 - 33029005
Alignment:
Q  151 taaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcg-tttgaaccggtctcgctcgctccgt 226  Q
    ||||||| |||||| |||||||| |||| | || ||||||||||||| | | |||||||||||| |||| |||||||    
T  33028929 taaccgttagagagattattgcgagaacgtacatagagacgttgtggtttgttttgaaccggtcccgcttgctccgt 33029005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 1712 - 1507
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| || |||||||||||||||| ||||| ||||  ||||||||||||||||||| |    
T  1712 gggtttagaggaagagatagattctaccttggggactgctttgagtgccctatttatagaggtggacggctgtagagctgttgtaatggcacacctggct 1613  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||| ||||  ||||||||| |||| |||||| ||||||||||||||||||||| || ||||||| ||||||| ||||||||||| |||||  ||||||    
T  1612 ctagcagttataaaatcgtgagaagtgtaaccgccagagagtttattgcgggaacgtgtagagagatgttgtggttcgtttgaaccagtctctttcgctc 1513  T
Q  224 cgtgca 229  Q
    ||||||    
T  1512 cgtgca 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 151481 - 151277
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||| |||||||||||||||||||||| |||| | || |||||||| ||||||||||||||||||||||||||| ||||||| ||| | |||||| |    
T  151481 gggtttaaaggaagagatagattctaccttagggaatgctgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtggaagacctggct 151382  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    ||||||||||||||||||||  ||||  || || ||||||||||||||| ||||| | |||||||||||||||| ||||||||| |||||||||||||||    
T  151381 ctagcggttacgaaatcgtgggaagt-gaaacgccagagagtttattgcaggaacgtacagagagacgttgtggttcgtttgaatcggtctcgctcgctc 151283  T
Q  224 cgtgca 229  Q
    ||||||    
T  151282 cgtgca 151277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 22915061 - 22915266
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| ||||||||||| |||| ||| |    
T  22915061 gggtttagaggaagagatagattctaccttggggactgctatgagtcccctatttataaaggtggagagctgcagagccgttgtaatggtacacttggct 22915160  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    |  ||||||| |||||||||  |||| |||| |  |||||||||||||||||||| || ||||||||||||||  ||||||||||  |||||||||||||    
T  22915161 ccggcggttatgaaatcgtgggaagtgtaacagctagagagtttattgcgggaacgtgaagagagacgttgtgattcgtttgaactagtctcgctcgctc 22915260  T
Q  224 cgtgca 229  Q
    ||||||    
T  22915261 cgtgca 22915266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 16853181 - 16852996
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||| ||||||||||| |  |||||||| |||||||||||||||||||||||| |   ||||||||||||||||||| ||| |||||||||||||||    
T  16853181 agattctcccttggggactgcattgagtcccctatttatagaggtggagggctgcaaatatgttgtaatggcacacctggctctggcggttacgaaatcg 16853082  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtg 227  Q
    ||  |||| |||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| || |||||||||||    
T  16853081 tgggaagtgtaaccgccagagagtttattgcggtaacgtgcagagagacgttgtggcttgtttgaaccggtgtcactcgctccgtg 16852996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 19790346 - 19790489
Alignment:
Q  86 tggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcaga 185  Q
    ||||||||||||||| |||||||||||||||||||  |||  ||||||||||||||||  |||| ||||||||||||||||||||| |||||| ||||||    
T  19790346 tggagggctgcagagccgttgtaatggcacacctgactctgacggttacgaaatcgtgggaagtgtaaccgtcagagagtttattgtgggaacgtgcaga 19790445  T
Q  186 gagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||||||||| ||||||||||| |||||  |||||| |||||    
T  19790446 gagacgttgtggttcgtttgaaccagtctctttcgctctgtgca 19790489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 16914715 - 16914904
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||| |||||||||||||||||| | |||||||||  || ||| ||  ||| ||||||||||||||||||||||| | |||||||||||||  | | |    
T  16914715 gggttttgaggaagagatagattctgctttggggactgttaagagccctctatatatagaggtggagggctgcagagccattgtaatggcacagatcggt 16914814  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtc 213  Q
    || |||||||||||||||||  | || |||||   |||||  | ||||||||||| |||| |||||||||| ||||||||||||||||||    
T  16914815 ctggcggttacgaaatcgtgggaggtgtaaccagtagagaaataattgcgggaacgtgcaaagagacgttgcggctcgtttgaaccggtc 16914904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 22006519 - 22006590
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggc 113  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22006519 agattctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaatggc 22006590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 22014036 - 22014107
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggc 113  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22014036 agattctaccttggggactgctacgagtcccttatatatagaggtggagggctgcagagtcgttgtaatggc 22014107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 19773395 - 19773462
Alignment:
Q  24 gggtttaga-ggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggag 90  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||| | |||||||||||||||||    
T  19773395 gggtttagaaggaagagatagattctaccttggggactgctgtgagtctcctatttatagaggtggag 19773462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 3559308 - 3559105
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| |||| |||||||||||||||| |||  || ||||||| ||| ||||||| |||  |||||||||| |||||||||||  ||  | |||    
T  3559308 gggtttagagggagag-tagattctaccttgggaactgttaagagtcccctatatatagagatgggtggctgcagagccgttgtaatggttcatgt-gtt 3559211  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    |  || ||||||||||||||  |||| |||||  || ||||    ||||||||||||||  ||||| ||||  | |||||||||||||||||| | ||||    
T  3559210 cctgcagttacgaaatcgtggaaagtgtaacctccaaagagagatttgcgggaacatgcgaagagatgttgcagttcgtttgaaccggtctcgtttgctc 3559111  T
Q  224 cgtgca 229  Q
     |||||    
T  3559110 tgtgca 3559105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 1998015 - 1998087
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgc 96  Q
    ||||||||||  ||||| ||||||||||||||||||| || ||||| || ||||||||||||||||| |||||    
T  1998015 gggtttagagacagagacagattctaccttggggactgctttgagtaccctatttatagaggtggagagctgc 1998087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 44635823 - 44635958
Alignment:
Q  91 ggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagac 190  Q
    |||||||||| |||||||||||||||| ||  ||   ||||||||||||||||  |||| |||||| |||||||    | |||||||| |||  ||||||    
T  44635823 ggctgcagagccgttgtaatggcacacgtgagtccgtcggttacgaaatcgtgggaagtgtaaccgccagagagagattcgcgggaacgtgcgaagagac 44635922  T
Q  191 gttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
    ||||| | ||||||||||  |||||||| |||||||    
T  44635923 gttgtagttcgtttgaactagtctcgcttgctccgt 44635958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 227
Target Start/End: Complemental strand, 4387 - 4184
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    |||||||||||||||||||||||||  ||||||||||  | |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  4387 gggtttagaggaagagatagattctctcttggggactgatgtgagtcccctatttatagaggtggagggctgcagagccgttgtagtggcacacctggct 4288  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || | |||||||||||||||  | || |||| |  ||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||| |||||||||    
T  4287 ctggtggttacgaaatcgtgggatgtgtaactgcgagagagtttattgcgagaacgtgcagatagacgttgtggttcgtttgaaccggtcccgctcgctc 4188  T
Q  224 cgtg 227  Q
    ||||    
T  4187 cgtg 4184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 1617 - 1803
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||| |||||||||  | |||||||| |||||||||||||||| |||||||||| ||||||||||||| || ||| |    
T  1617 gggtttagaggaagagatagattctacattggggactgttgtgagtcccctatttatagaggtggatggctgcagagccgttgtaatggcatacttggct 1716  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagag-tttattgcgggaacatgcagagagacgttgtggctcgtttgaacc 209  Q
    || |||||||||||||||||  |||| |||||| ||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  1717 ctggcggttacgaaatcgtgggaagtgtaaccgccagagagttttattgcgggaacgtgcagagagacgttgtggttcgtttgaacc 1803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 167
Target Start/End: Original strand, 15374 - 15517
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||||||||||||||||||  |||||||  |||||||||| ||||||||||||||||||||||||||| ||||| |||||||  ||||  |    
T  15374 gggtttagaggaagagatagattctaccgcggggactgttatgagtcccctatttatagaggtggagggctgcagagccgttgcaatggcatgcctgact 15473  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagttt 167  Q
    || |||||||| ||||||||  |||| |||||| ||||||||||    
T  15474 ctggcggttactaaatcgtgggaagtgtaaccgccagagagttt 15517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 74859 - 75057
Alignment:
Q  29 tagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagc 128  Q
    |||||||||||||||||||||||||||||| | |  |||||||| |||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||    
T  74859 tagaggaagagatagattctaccttggggaatgcggtgagtcccctatttatagaggtggagggctgtagagccgttgtaatggcacacctggctctggc 74958  T
Q  129 ggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtg 227  Q
     |||| ||||||||   |||| |||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||||||| |||||| | ||||||||    
T  74959 agttatgaaatcgtcggaagtgtaaccgccagagagtttattgcgggaacgtgcggagacacgttgtggctcgtttgaaccagtctcggttgctccgtg 75057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 31 - 229
Target Start/End: Original strand, 68689 - 68887
Alignment:
Q  31 gaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcgg 130  Q
    |||||||| ||||||||||||||||| ||| |  |||||||| |||||||||||||||||||||||| || |||||||||| ||||||| | | | ||||    
T  68689 gaggaagatatagattctaccttgggcactgcggtgagtcccctatttatagaggtggagggctgcaaagccgttgtaatgacacaccttgctttggcgg 68788  T
Q  131 ttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||||||||||  |||| ||||||  |||||||||||||||||||| ||   ||||||||||||||||||||||||  |||||| | ||||||||||    
T  68789 ttacgaaatcgtgggaagtgtaaccgctagagagtttattgcgggaacgtgggaagagacgttgtggctcgtttgaactagtctcggttgctccgtgca 68887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 229
Target Start/End: Complemental strand, 16505 - 16301
Alignment:
Q  26 gtttagaggaagagatagattctaccttgggg-actactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    ||||| ||||||||||| |||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||| | ||||||||| |||||||| ||    
T  16505 gtttaaaggaagagataaattctaccttgggggactgctttgagtcccctatttatagaggtggagggctgcagagccattgtaatggtacacctggctc 16406  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctcc 224  Q
    | |||||||| ||||||||  |||| |||||  ||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||  |||||||    
T  16405 tggcggttacaaaatcgtgggaagtgtaaccaccagagagtttattgcgggaacgtgcagagagatgttgtggttcgtttgaaccagtctcattcgctcc 16306  T
Q  225 gtgca 229  Q
    |||||    
T  16305 gtgca 16301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 253323 - 253527
Alignment:
Q  25 ggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttc 124  Q
    ||||||||||||||| ||||||||||||||||||||    |||||||| ||| |||| ||||||| ||||||| ||||||||||||||||||||||| ||    
T  253323 ggtttagaggaagagttagattctaccttggggactgtagtgagtcccctatatataaaggtggacggctgcaaagtcgttgtaatggcacacctggctc 253422  T
Q  125 tagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctcc 224  Q
    | |||||||||||||||||  |||| |||| | ||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||| || | ||||    
T  253423 tggcggttacgaaatcgtgggaagtgtaactgccagagagtttattgcgggaacgtgcagagagatgttgtggttcatttgaaccggtcttgcactctcc 253522  T
Q  225 gtgca 229  Q
    |||||    
T  253523 gtgca 253527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 242685 - 242887
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttcta 126  Q
    ||||||||||||| ||||||||| | ||||||||    ||||| |  ||| |||||||||||||||| |||||| |||||||||||||||||||| |||     
T  242685 tttagaggaagagttagattctatcctggggactgaagtgagtactctatatatagaggtggagggcggcagagccgttgtaatggcacacctggctctt 242784  T
Q  127 gcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
    ||||||||| |||||||  |||| |||| | || |||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||    
T  242785 gcggttacgtaatcgtgggaagtgtaactgccaaagagtttattgcgggaacgtgcaaagagacgttgtggttcgtttgaaccggtcttgctcgctccgt 242884  T
Q  227 gca 229  Q
    |||    
T  242885 gca 242887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 229
Target Start/End: Complemental strand, 30245 - 30043
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttcta 126  Q
    ||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||| | |||||| || |||||||| |||     
T  30245 tttagaggaagagatagattctaccttagggactgctgtgagtcccgtatttatagaggtggagggctgcagagccattgtaacggaacacctggctctg 30146  T
Q  127 gcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgt 226  Q
    | ||||||||||| |||  |||| |||||  |||||| |||||||||||||| || ||||||||||||||| ||||||||||| |||||  |||||||||    
T  30145 gtggttacgaaattgtgggaagtgtaacctccagagattttattgcgggaacgtgtagagagacgttgtggttcgtttgaaccagtctctttcgctccgt 30046  T
Q  227 gca 229  Q
    |||    
T  30045 gca 30043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 229
Target Start/End: Complemental strand, 3009 - 2816
Alignment:
Q  35 aagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttac 134  Q
    ||||| ||||||||||||| ||||||  ||||||||||| || ||||||||||||| |||||||||  |||||||||||||||| || ||| ||||||||    
T  3009 aagagttagattctaccttcgggactgttatgagtccct-atatatagaggtggagagctgcagagctgttgtaatggcacaccaggctctggcggttac 2911  T
Q  135 gaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |||||||||  |||| ||||||  |||||| ||||| | ||||| ||||||||||| |||||  |||||||||||||||| | ||||||||||||    
T  2910 gaaatcgtgggaagtgtaaccgctagagagattattactggaacgtgcagagagacattgtgtttcgtttgaaccggtcttgttcgctccgtgca 2816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 37416 - 37212
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||| ||||| |||||| ||||||| |||| ||||| | | ||||||| ||| ||||||||||||||||||||||| |||||| ||||||| || || |    
T  37416 gggttaagagggagagattgattctatcttgcggactgccacgagtcccctatatatagaggtggagggctgcagagccgttgtgatggcacgccaggct 37317  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || ||||||| |||||||||  |||| |||||| ||||||| ||||||| ||||||||||||||||||||| || | ||||||| |||||| ||| ||||    
T  37316 ctggcggttatgaaatcgtgggaagtgtaaccg-cagagagattattgcaggaacatgcagagagacgttgcggtttgtttgaatcggtcttgcttgctc 37218  T
Q  224 cgtgca 229  Q
     |||||    
T  37217 tgtgca 37212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 12332 - 12535
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||||| || |||||| ||||||||||  |  |||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||| || |    
T  12332 gggtttagaggaatagttagattataccttggggtttgttatgagtcccctatatatagaggtgaagggctgcagagccgttgtaatggcacaccaggct 12431  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    || |||||||| ||||| ||  |||| ||||||  |||||| ||||||||||||| |||  | |||||||||||||| ||| ||||||||| | ||||||    
T  12432 ctggcggttacaaaatcatgggaagtgtaaccgctagagagattattgcgggaacgtgc--acagacgttgtggctcatttaaaccggtcttgttcgctc 12529  T
Q  224 cgtgca 229  Q
     |||||    
T  12530 tgtgca 12535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 14871 - 15085
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||||||| |  |||||||||||||||||| |  |||||||| |||||||| ||||||| ||| |||||| |||||||||||    
T  14871 cagagagtgagggttttagaggaagaaa--gattctaccttggggactgcattgagtcccctatttataaaggtggatggccgcagagccgttgtaatgg 14968  T
Q  113 cacacctggttctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggt 212  Q
    |||||||   |||  ||||||||||||||||  |||| |||| | | | ||||||||||||||||| || | ||||||| || || |||||||||||| |    
T  14969 cacacctaactctgacggttacgaaatcgtgggaagtgtaacagcctgtgagtttattgcgggaacgtggaaagagacgctggggttcgtttgaaccgat 15068  T
Q  213 ctcgctcgctccgtgca 229  Q
    |||  ||| ||||||||    
T  15069 ctctttcgttccgtgca 15085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 17086 - 17190
Alignment:
Q  13 cagagagttgggggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatgg 112  Q
    ||||||||  ||| |||||||||||| |  ||||||||||||| |||| |  |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  17086 cagagagtaagggttttagaggaagaaa--gattctaccttggagactgcattgagtcccatatttatagaggtggagggctgcagagctgttgtaatgg 17183  T
Q  113 cacacct 119  Q
    |||||||    
T  17184 cacacct 17190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 17200 - 17267
Alignment:
Q  162 gagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    ||||||||||||||||| || | |||||||||| || ||||||||||| |||||  ||| ||||||||    
T  17200 gagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgca 17267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 215
Target Start/End: Complemental strand, 11045 - 10872
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||| ||||||||||| |  |||||||  |||||||| ||||||||||||| |||| ||||||||||||||||||   |||  |||||||||||||     
T  11045 agattctcccttggggactccattgagtccactatttataaaggtggagggctgtagagccgttgtaatggcacacctaactctgacggttacgaaatca 10946  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctc 215  Q
    ||  |||| |||||| | | |||||||||||||||||||| | |||||||||| |  || ||||||||||||||    
T  10945 tgggaagtgtaaccgcctgtgagtttattgcgggaacatggaaagagacgttgggtttcttttgaaccggtctc 10872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 86551 - 86434
Alignment:
Q  26 gtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttct 125  Q
    ||||||||||||| |||||||||| ||| |||||| ||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||||  || |||    
T  86551 gtttagaggaagaaatagattctatcttcgggactgctatgagtcccctatatatagaggtggagggttgcaaagtcgttgtaatggcacactaggctct 86452  T
Q  126 agcggttacgaaatcgtg 143  Q
     ||| |||||||||||||    
T  86451 ggcgattacgaaatcgtg 86434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 19162 - 19254
Alignment:
Q  27 tttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacct 119  Q
    |||||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||| | |||||| |||||||||    
T  19162 tttagaggaagagatagattctaccttggggactgcagtgagtcccctatttatagaggtggagggctgcagagccattgtaacggcacacct 19254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 229
Target Start/End: Complemental strand, 7522 - 7336
Alignment:
Q  42 agattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcg 141  Q
    ||||||||||||||||| | |  |||||||| |||||||||||||||||||||||| || ||||||||||||||||||   ||| |  ||||||||||||    
T  7522 agattctaccttggggattgcattgagtcccctatttatagaggtggagggctgcaaagccgttgtaatggcacaccttactct-gacgttacgaaatcg 7424  T
Q  142 tgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgca 229  Q
    |   |||| |||| | | | ||||||||||||||||| || | |||||||||| || ||||||||||| |||||  ||| ||||||||    
T  7423 ttggaagtgtaactgcctgtgagtttattgcgggaacgtggaaagagacgttggggttcgtttgaaccagtctctttcgttccgtgca 7336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 54770 - 54590
Alignment:
Q  48 taccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtgataa 147  Q
    |||||| |||||| |  |||||||| |||||||||||||||||||||||| || ||||||||||| ||||||   |||  ||||||||||||| ||  ||    
T  54770 tacctttgggactgcattgagtcccctatttatagaggtggagggctgcatagccgttgtaatggtacaccttactctgacggttacgaaatcatgggaa 54671  T
Q  148 gtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctccgtgc 228  Q
    || |||||  | | ||||||||||||||||| || |||||||||||| |  ||||||||||| |||||  ||| |||||||    
T  54670 gtgtaaccacctgtgagtttattgcgggaacgtggagagagacgttgggtttcgtttgaaccagtctccttcgttccgtgc 54590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 223
Target Start/End: Complemental strand, 20455 - 20276
Alignment:
Q  44 attctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggttctagcggttacgaaatcgtg 143  Q
    |||||||||||||||||  || ||||||| ||||| ||||||||||||||||||||| ||||||||||| |||| ||| || ||||||||| |||| |||    
T  20455 attctaccttggggactgttaagagtcccctatttttagaggtggagggctgcagagccgttgtaatggtacacttgggtcaagcggttacaaaattgtg 20356  T
Q  144 ataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
      |||| ||||||  |||||  | |||| |||| ||||  ||||||| || || ||||||| ||| ||||||||| ||||    
T  20355 ggaagtgtaaccgctagagaaataattgtgggagcatgttgagagacattatgactcgtttaaactggtctcgcttgctc 20276  T

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Target: scaffold0483 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 9227 - 9339
Alignment:
Q  102 cgttgtaatggcacacctggttctagcggttacgaaatcgtgataagtataa-ccgtcagagagtttattgcgggaacatgcagagagacgttgtggctc 200  Q
    ||||||||||||||||||||      |||||||||||| |||  |||| ||| |||  |||||||||||||| ||||| |||||||||||||||||| ||    
T  9227 cgttgtaatggcacacctgg------cggttacgaaattgtgggaagtgtaaaccgctagagagtttattgcaggaacgtgcagagagacgttgtggttc 9320  T
Q  201 gtttgaaccggtctcgctc 219  Q
    ||||||||| |||||||||    
T  9321 gtttgaaccagtctcgctc 9339  T

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Target: scaffold0063 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 36969 - 36765
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcacacctggtt 123  Q
    ||||||||||| |||| ||||||||||||| | ||||  || ||||||| ||| |||||||||||  ||||| |||| |||||||||||||||| ||  |    
T  36969 gggtttagagggagag-tagattctaccttagagactgttaagagtcccctatatatagaggtgggtggctgtagagccgttgtaatggcacacgtgtgt 36871  T
Q  124 ctagcggttacgaaatcgtgataagtataaccgtcagagagtttattgcgggaacatgcagagagacgttgtggctcgtttgaaccggtctcgctcgctc 223  Q
    |   |||||||||||| |||  |||| |||||  || ||||    |||||||||| |||  ||||||||||  | |||||||||| | ||||||| ||||    
T  36870 ccgacggttacgaaattgtgggaagtgtaacctccaaagagagatttgcgggaacttgcgaagagacgttgcagttcgtttgaactgttctcgcttgctc 36771  T
Q  224 cgtgca 229  Q
     |||||    
T  36770 tgtgca 36765  T

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Target: scaffold0063; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 49416 - 49325
Alignment:
Q  24 gggtttagaggaagagatagattctaccttggggactactatgagtcccttatttatagaggtggagggctgcagagtcgttgtaatggcaca 116  Q
    ||||||||||| |||| ||||||||||||| |||||   || ||||||| ||| |||||||||||  || ||||||| |||||||||||||||    
T  49416 gggtttagagggagag-tagattctaccttagggacagttaagagtcccctatatatagaggtgggtggatgcagagccgttgtaatggcaca 49325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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