View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9862_low_3 (Length: 504)
Name: NF9862_low_3
Description: NF9862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9862_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 466; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 7 - 492
Target Start/End: Original strand, 34310926 - 34311411
Alignment:
| Q |
7 |
ttcataactctgcctttgaagttgcgttaagttctgttaccgaatttgaacatgtttcagtttttcatattgatctatctaagtctaatcatgcttatga |
106 |
Q |
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| T |
34310926 |
ttcataactctgcctttgaagttgcgttaagttctgttaccgaatttgaacttgtttccgtttttcatattgatctatctaagtctaatcatgcttatta |
34311025 |
T |
|
| Q |
107 |
acatagcaggattcagaaaacaaaagcacaaaagataagaagaaaggtgtaggaaaactaaagcatggagagaccaattctttcatccccctcttcagag |
206 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34311026 |
acatagcaggattcagaaaacaaaagcacaaaagagaagaagaaaggtgtaggaaaactaaagcatggagagaccaattctttcatccccctcttcagag |
34311125 |
T |
|
| Q |
207 |
aaccaagcagcattgagaaaatatttggagactttgaaagagaacagcaagtacttgcaattaggcctcccacacctcccgagcgaccaaaaacgccacc |
306 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34311126 |
aaccaagcagcattgagaaaatatttggtgactttgaaagagaacagcaagtacttgcaattaggcctcccacacctcccgagcgaccaaaaacgccacc |
34311225 |
T |
|
| Q |
307 |
tttcgtccctcctagagttgcttctcctaggcctccttctcctaagcctccttctccaagggatccatctccaagggccgcttctccgcgagttacctct |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34311226 |
tttcgtccctcctagagttgcttctcctaggcctccttctcctaagcctccttctccaagggatccatctccaagggccgcttctccgcgagttacctct |
34311325 |
T |
|
| Q |
407 |
ccaaaagcggcatcttcgcggaatgttcatcaacacaaggaggttcgctacagaccagaaccaactttacagaaccagcatgtctc |
492 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34311326 |
ccaaaagcggcatcttcgcggaatgttcatcaacacaaggaggttcgctacagaccagaaccaactttacagaaccagcatgtctc |
34311411 |
T |
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