View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9862_low_4 (Length: 492)

Name: NF9862_low_4
Description: NF9862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9862_low_4
NF9862_low_4
[»] chr4 (19 HSPs)
chr4 (1-461)||(1326003-1326464)
chr4 (3-150)||(4875907-4876054)
chr4 (59-150)||(44185371-44185462)
chr4 (294-460)||(24539193-24539359)
chr4 (292-389)||(2527703-2527800)
chr4 (290-389)||(11653570-11653669)
chr4 (293-384)||(46420749-46420840)
chr4 (293-374)||(49748217-49748298)
chr4 (294-389)||(9061519-9061614)
chr4 (318-445)||(4875454-4875581)
chr4 (280-385)||(42351123-42351228)
chr4 (294-383)||(49357896-49357985)
chr4 (293-461)||(40682125-40682293)
chr4 (317-440)||(54243649-54243772)
chr4 (300-389)||(22455138-22455225)
chr4 (356-461)||(23633233-23633338)
chr4 (311-374)||(12758477-12758540)
chr4 (293-331)||(44783708-44783746)
chr4 (318-383)||(23633373-23633438)
[»] chr6 (5 HSPs)
chr6 (294-461)||(28078623-28078790)
chr6 (293-389)||(26898834-26898930)
chr6 (367-453)||(8674808-8674894)
chr6 (367-453)||(8685487-8685573)
chr6 (325-387)||(14365977-14366039)
[»] chr3 (11 HSPs)
chr3 (293-457)||(49453230-49453394)
chr3 (3-146)||(5387503-5387646)
chr3 (327-461)||(38362725-38362859)
chr3 (294-389)||(51657245-51657340)
chr3 (294-389)||(49067080-49067175)
chr3 (285-389)||(40823603-40823706)
chr3 (296-389)||(48314571-48314664)
chr3 (294-381)||(13495951-13496038)
chr3 (292-387)||(5557889-5557984)
chr3 (291-330)||(30761264-30761303)
chr3 (293-328)||(53926345-53926380)
[»] chr5 (7 HSPs)
chr5 (331-461)||(29379932-29380062)
chr5 (294-389)||(42691629-42691724)
chr5 (289-383)||(19121278-19121372)
chr5 (293-389)||(17413501-17413597)
chr5 (294-369)||(5399100-5399175)
chr5 (317-389)||(35392147-35392219)
chr5 (337-389)||(43622691-43622743)
[»] chr7 (13 HSPs)
chr7 (293-461)||(38029564-38029733)
chr7 (293-384)||(729013-729104)
chr7 (299-445)||(36159375-36159521)
chr7 (294-389)||(16718882-16718977)
chr7 (294-389)||(17693092-17693187)
chr7 (294-389)||(29322634-29322729)
chr7 (294-389)||(39703883-39703978)
chr7 (294-383)||(40462315-40462404)
chr7 (318-389)||(26455241-26455312)
chr7 (294-389)||(34405054-34405149)
chr7 (327-389)||(24396474-24396536)
chr7 (336-389)||(2732828-2732881)
chr7 (336-384)||(20078065-20078113)
[»] scaffold0891 (1 HSPs)
scaffold0891 (294-389)||(1259-1354)
[»] chr8 (13 HSPs)
chr8 (328-441)||(25629537-25629650)
chr8 (290-389)||(41842816-41842915)
chr8 (293-389)||(34893023-34893119)
chr8 (291-372)||(37063918-37063999)
chr8 (306-389)||(16913160-16913244)
chr8 (3-67)||(26531509-26531573)
chr8 (287-341)||(27853769-27853823)
chr8 (3-62)||(27183114-27183173)
chr8 (3-62)||(27231112-27231171)
chr8 (293-389)||(15096696-15096793)
chr8 (3-98)||(12721475-12721570)
chr8 (3-50)||(31135858-31135905)
chr8 (3-32)||(12646273-12646302)
[»] scaffold0210 (2 HSPs)
scaffold0210 (294-369)||(17760-17835)
scaffold0210 (294-369)||(25652-25727)
[»] chr2 (4 HSPs)
chr2 (294-389)||(37995369-37995464)
chr2 (293-370)||(12008478-12008555)
chr2 (324-389)||(10128587-10128652)
chr2 (297-369)||(25882661-25882733)
[»] scaffold0044 (1 HSPs)
scaffold0044 (294-389)||(87829-87924)
[»] chr1 (6 HSPs)
chr1 (294-389)||(50290335-50290430)
chr1 (296-389)||(39268247-39268340)
chr1 (293-372)||(8998819-8998898)
chr1 (299-382)||(49193134-49193217)
chr1 (293-330)||(23085899-23085936)
chr1 (332-388)||(52407913-52407969)
[»] scaffold0090 (1 HSPs)
scaffold0090 (294-389)||(12588-12683)
[»] scaffold1155 (1 HSPs)
scaffold1155 (294-382)||(68-156)
[»] scaffold0642 (1 HSPs)
scaffold0642 (294-382)||(150-238)
[»] scaffold0345 (1 HSPs)
scaffold0345 (294-382)||(10061-10149)
[»] scaffold0105 (1 HSPs)
scaffold0105 (294-382)||(28831-28919)
[»] scaffold0831 (1 HSPs)
scaffold0831 (12-94)||(2146-2228)
[»] scaffold0246 (1 HSPs)
scaffold0246 (327-389)||(8829-8891)
[»] scaffold0108 (1 HSPs)
scaffold0108 (294-384)||(13602-13691)


Alignment Details
Target: chr4 (Bit Score: 410; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 1 - 461
Target Start/End: Complemental strand, 1326464 - 1326003
Alignment:
Q  1 taagggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagatttgaggggtaatttggaaagaatagagaaggaaatgtcat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1326464 taagggttttgaaataaaagagactatggtttgcatgcacacgtaaatcgtttgagagatttgagaggtaatttggaaagaatagagaaggaaatgtcat 1326365  T
Q  101 cggcaatatagctagtgttgctaaccttgtcactttttgtagccatggatggatttctttgtcaaagctgaagccaattctctgtaagcgtgcaatccaa 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1326364 cagcaatatagctagtgttgctaaccttgtcactttttgtagccatggatggatttctttgtcaaagctgaagccaattctctgtaagcgtgcaatccaa 1326265  T
Q  201 actactttgttttgtgacaaacaaa-cggttgtgagcttatggtctactagcgtttagggtttttattataccaacgtgtataaattataaataactaga 299  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1326264 agtactttgttttgtgacaaacaaaacggttgtgagcttatggtctactagcgtttagggtttttattataccaacgtgtataaattataaataattaga 1326165  T
Q  300 ccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgattaaa 399  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1326164 ccatcgacccgtgctatcgcacgcgtcatatcgaaggtaatatttgacagtaacatgtaacaaaatagtttagttgaatgtcataattgttctgattaaa 1326065  T
Q  400 ttcataatattaattatcatagacattggtactgtatcatatcatattatgtccatgacatc 461  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1326064 ttcataatattaattatcatagacattggtactatatcatatcatattatgaccatgacatc 1326003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 4876054 - 4875907
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagatttgaggggtaatttggaaagaatagagaaggaaatgtcatcg 102  Q
    |||||||||||||||||||||| ||| |||| | ||||| |||||||  |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  4876054 agggttttgaaataaaagagacgatgatttggaggcacatgtaaatcaattgagagattggaggggtaatttggaaagaatagaaaaggaaatgtcatcg 4875955  T
Q  103 gcaatatagctagtgttgctaaccttgtcactttttgtagccatggat 150  Q
    | ||||||||||  ||| ||||||||||||||||||||||||||||||    
T  4875954 ggaatatagctacggttactaaccttgtcactttttgtagccatggat 4875907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 44185462 - 44185371
Alignment:
Q  59 atttgaggggtaatttggaaagaatagagaaggaaatgtcatcggcaatatagctagtgttgctaaccttgtcactttttgtagccatggat 150  Q
    |||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||  ||| ||||||||||||||||||||||||||||||    
T  44185462 atttgaggggtaatttggaaagaatagaaaacgaaatttcatcaggaatatagctacggttactaaccttgtcactttttgtagccatggat 44185371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 460
Target Start/End: Complemental strand, 24539359 - 24539193
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctg 393  Q
    ||||||||||||||| |||||| |||||| ||||||| |||||||||||||||  |||| | |||||||||||||||| || |||||||| || ||  |     
T  24539359 actagaccatcgaccagtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttacatgaatgtcatgatcgtcata 24539260  T
Q  394 attaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtccatgacat 460  Q
        | |||||||||||||  | ||||||| ||||||||||| |||| |||| ||| ||||||||||    
T  24539259 tagtatttcataatattaagaagcatagactttggtactgtaccataacataatatttccatgacat 24539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 2527800 - 2527703
Alignment:
Q  292 taactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||| |||||||| |||||  ||||||| |||||||||||||||  |||| |  |||||||||||||||||| ||||||||||||||    
T  2527800 taactagaccatcgatccgtgctaacgcacatgtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtcataattgt 2527703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 11653570 - 11653669
Alignment:
Q  290 aataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||| |||||||||||||||  ||||| ||||||| |||||||||||||||  |||| | |||| |||||||||||||| |||||||| |||||    
T  11653570 aataactagatcatcgacccgtgctaatgcacgggtcatatggaaggtaatatttgacggtaataggtaataaaatagtttagatgaatgtcatgattgt 11653669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 384
Target Start/End: Complemental strand, 46420840 - 46420749
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcata 384  Q
    |||||||||||||| ||||||||  |||| |||||||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||||    
T  46420840 aactagaccatcgatccgtgctaatgcacaagtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcata 46420749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 49748217 - 49748298
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagat 374  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||  |||| | ||| |||||||||||||||    
T  49748217 aactagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtagcaaaatagtttagat 49748298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 9061614 - 9061519
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||| ||||   ||||||| ||| ||||||||| |  |||| | ||||||||||||||||||| |||||||| |||||    
T  9061614 actagaccatcgacccgtgctaacgcataggtcatatggaatgtaatatttaacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 9061519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 4875454 - 4875581
Alignment:
Q  318 gcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgattaaattcataatattaattatc 417  Q
    ||||| ||||||| |||||||||||||||   ||| | ||||||||||||||||||| |||||||| |||||  ||    | |||||||||||||  | |    
T  4875454 gcacgggtcatatggaaggtaatatttgacgttaataggtaacaaaatagtttagatgaatgtcatgattgtcatgtaatatttcataatattaagaagc 4875553  T
Q  418 atagacattggtactgtatcatatcata 445  Q
    |||||| ||||||||||| |||| ||||    
T  4875554 atagacgttggtactgtaccataacata 4875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 42351228 - 42351123
Alignment:
Q  280 ataaattataaataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatg 379  Q
    |||||| ||| || ||||||||||| |   |||||| || || |||||||| |||||||||||||||  |||| |  |||||||||||||||||| ||||    
T  42351228 ataaataatacatcactagaccatcaatttgtgctaacgtacaagtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatg 42351129  T
Q  380 tcataa 385  Q
    ||||||    
T  42351128 tcataa 42351123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 383
Target Start/End: Complemental strand, 49357985 - 49357896
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcat 383  Q
    |||||||||||||||||||||| |||||  ||||||| |||||||||||||||  |||| | |||| | | || ||||||| ||||||||    
T  49357985 actagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttgacggtaataggtaaaatagtattttagatgaatgtcat 49357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 40682125 - 40682293
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttct 392  Q
    ||||||| ||| ||||| ||||| |||||| | ||||||||||||||||||| |  | || | ||||||||||||||||||| ||||  || |||||| |    
T  40682125 aactagatcattgacccatgctaacgcacgggacatatcgaaggtaatatttaacggcaataggtaacaaaatagtttagatgaatgctatgattgttat 40682224  T
Q  393 gattaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtccatgacatc 461  Q
         | |||||||||||||  | ||||||  ||||||||||| || | |||| ||| |||||||||||    
T  40682225 atagtatttcataatattaagaagcatagatgttggtactgtaccacaacataatatttccatgacatc 40682293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 440
Target Start/End: Complemental strand, 54243772 - 54243649
Alignment:
Q  317 cgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgattaaattcataatattaattat 416  Q
    |||||| ||||||| |||| ||||||||||   ||| | |||||||||||||||| ||||||||||| |||||| |     | |||||||||||||  |     
T  54243772 cgcacgggtcatatggaagttaatatttgacgataataggtaacaaaatagtttaaataaatgtcatgattgttatatagtatttcataatattaagaag 54243673  T
Q  417 catagacattggtactgtatcata 440  Q
    ||||||| ||||||||||| ||||    
T  54243672 catagacgttggtactgtaccata 54243649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 22455225 - 22455138
Alignment:
Q  300 ccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||  || |||| | ||||||| |||||||||||||||  |||| | |||| ||||||||||| || ||||||||||||||    
T  22455225 ccatcgacccgt--taacgcatgggtcatatggaaggtaatatttgacggtaataagtaataaaatagtttaaatgaatgtcataattgt 22455138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 461
Target Start/End: Complemental strand, 23633338 - 23633233
Alignment:
Q  356 gtaacaaaatagtttagataaatgtcataattgttctgattaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtccat 455  Q
    |||||||||||||||| ||||||||||| |||||  |     | |||||||||||||  | ||||||| ||||||||||| |||| |||| ||| |||||    
T  23633338 gtaacaaaatagtttaaataaatgtcatgattgtcatatagtatttcataatattaagaaccatagacgttggtactgtaccataacataatatttccat 23633239  T
Q  456 gacatc 461  Q
    ||||||    
T  23633238 gacatc 23633233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 12758477 - 12758540
Alignment:
Q  311 tgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagat 374  Q
    ||||| || ||| ||||||| |||||||||||||||  |||| | |||||||||||||||||||    
T  12758477 tgctaacgtacgggtcatatggaaggtaatatttgacggtaataagtaacaaaatagtttagat 12758540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 44783708 - 44783746
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatc 331  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  44783708 aactagaccatcgacccgtgctatcgcacgggtcttatc 44783746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 23633373 - 23633438
Alignment:
Q  318 gcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcat 383  Q
    ||||| |||||| ||||||||||||||||  |||| |  ||||||||||||||| || ||||||||    
T  23633373 gcacgggtcataccgaaggtaatatttgacggtaatagataacaaaatagtttaaatgaatgtcat 23633438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 294 - 461
Target Start/End: Original strand, 28078623 - 28078790
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctg 393  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||   ||| ||||||||||||| ||||||  | |||||||||||||||||     
T  28078623 actagaccatcgacccgtgatatcgcacgggtcatatcgaaggtaatatttagcagtgacatgtaacaaaagagtttaattgaatgtcataattgttcta 28078722  T
Q  394 attaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtccatgacatc 461  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28078723 attaaattcataatattaattatcatagacattggtactgtaccatatcatattatgtccatgacatc 28078790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 26898834 - 26898930
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||||||||||| | |||| ||||||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  26898834 aactagaccatcgacccgtgctaccacacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 26898930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 453
Target Start/End: Complemental strand, 8674894 - 8674808
Alignment:
Q  367 gtttagataaatgtcataattgttctgattaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtcc 453  Q
    |||||| | ||||||||||||||| | ||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||    
T  8674894 gtttagttgaatgtcataattgttttaattaaattcataatattaattatcatatatattggtattgtaccatatcatattatgtcc 8674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 453
Target Start/End: Complemental strand, 8685573 - 8685487
Alignment:
Q  367 gtttagataaatgtcataattgttctgattaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtcc 453  Q
    |||||| | ||||||||||||||| | ||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||    
T  8685573 gtttagttgaatgtcataattgttttaattaaattcataatattaattatcatatatattggtattgtaccatatcatattatgtcc 8685487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 14365977 - 14366039
Alignment:
Q  325 tcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataatt 387  Q
    |||||||||||| |||||||||  |||| |   ||||||||||||||||||||||||||||||    
T  14365977 tcatatcgaaggcaatatttgatggtaatagaaaacaaaatagtttagataaatgtcataatt 14366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 293 - 457
Target Start/End: Original strand, 49453230 - 49453394
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttct 392  Q
    |||||||||||||||| |||||||||| || | ||||| ||||||||||||| | ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  49453230 aactagaccatcgacctgtgctatcgcgcgggacatattgaaggtaatattttatagtaatatgtagcaaaatagtttagttaaatgtcataattgttct 49453329  T
Q  393 gattaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtccatga 457  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49453330 aattaaattcataatattaattatcatagacattggtattgtatcatatcatattatgtccatga 49453394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 5387646 - 5387503
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagatttgaggggtaatttggaaagaatagagaaggaaatgtcatcg 102  Q
    |||||||||||||||||||||||| | |||| | ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5387646 agggttttgaaataaaagagaccaagatttggaggcacaggtaaatcgattgagagatttgaggggtaatttggaaagaatagaaaaggaaatgtcatcg 5387547  T
Q  103 gcaatatagctagtgttgctaaccttgtcactttttgtagccat 146  Q
    | ||||||| || |||| ||||||||||||||||||||||||||    
T  5387546 gaaatatagttactgttactaaccttgtcactttttgtagccat 5387503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 327 - 461
Target Start/End: Complemental strand, 38362859 - 38362725
Alignment:
Q  327 atatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgattaaattcataatattaattatcatagacatt 426  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38362859 atatcgaaggtaatatttgacggtaatatgtaataaaatagtttagttgaatgtcataattgttctaattaaattcataatattaattatcatagacatt 38362760  T
Q  427 ggtactgtatcatatcatattatgtccatgacatc 461  Q
    ||||||||| ||||||||| |||||||||||||||    
T  38362759 ggtactgtaccatatcatagtatgtccatgacatc 38362725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 51657340 - 51657245
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||| |||||  ||||||| |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  51657340 actagaccatcgacccgtgctaacgcacatgtcatatggaaggtaatatttgagggtaacaagtaacaaaatagtttagatgaatgtcataattgt 51657245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 49067080 - 49067175
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  49067080 actagaccatcgacccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 49067175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 389
Target Start/End: Complemental strand, 40823706 - 40823603
Alignment:
Q  285 ttataaataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcata 384  Q
    ||||||||| |||||||||||||||||||||  ||||| ||||||| |||||||||||||||  |||| | |||| |||||||||||||| ||||||||     
T  40823706 ttataaata-ctagaccatcgacccgtgctaaggcacgggtcatatggaaggtaatatttgaccgtaataggtaaaaaaatagtttagatgaatgtcatg 40823608  T
Q  385 attgt 389  Q
    |||||    
T  40823607 attgt 40823603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 48314664 - 48314571
Alignment:
Q  296 tagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||| ||||||||||||||| || ||| ||||||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  48314664 tagatcatcgacccgtgctaacgtacgggtcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 48314571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 13496038 - 13495951
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtc 381  Q
    |||||||||||||||||||||| || | | |||||||||||||||||||||||  |||| | |||| |||||||||||||| ||||||    
T  13496038 actagaccatcgacccgtgctaacgtaagggtcatatcgaaggtaatatttgacggtaataggtaataaaatagtttagatgaatgtc 13495951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 5557984 - 5557889
Alignment:
Q  292 taactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataatt 387  Q
    |||| ||||||| | ||||||||| |||||  ||||||| ||| |||||||||||   ||| | ||||||||||| ||||||| ||||||||||||    
T  5557984 taacaagaccattggcccgtgctaacgcacaggtcatatggaatgtaatatttgatgataataggtaacaaaataatttagatgaatgtcataatt 5557889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 30761264 - 30761303
Alignment:
Q  291 ataactagaccatcgacccgtgctatcgcacgagtcatat 330  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  30761264 ataactagaccatccacccgtgctatcgcacgggtcatat 30761303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 328
Target Start/End: Original strand, 53926345 - 53926380
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcat 328  Q
    ||||||||||||||||||||||| ||||||||||||    
T  53926345 aactagaccatcgacccgtgctaacgcacgagtcat 53926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 331 - 461
Target Start/End: Complemental strand, 29380062 - 29379932
Alignment:
Q  331 cgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgattaaattcataatattaattatcatagacattggta 430  Q
    |||| ||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29380062 cgaaagtaatatttggcagtaacatgtaacaaaatagtttagttgaatgtcataattgttctaattaaattcataatattaattatcatagacattggta 29379963  T
Q  431 ctgtatcatatcatattatgtccatgacatc 461  Q
    ||||| |||||||||||||||||||||||||    
T  29379962 ctgtaccatatcatattatgtccatgacatc 29379932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 42691629 - 42691724
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||||||||||  || | || |||||||||||||||||| |||||||| |||||    
T  42691629 actagaccatcgacctgtgctaacgcacgagtcatatggaaggtaatatttgatggtgatatctaacaaaatagtttagatgaatgtcatgattgt 42691724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 383
Target Start/End: Original strand, 19121278 - 19121372
Alignment:
Q  289 aaataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcat 383  Q
    ||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||| |  |||| | ||||||||||||||||||| ||||||||    
T  19121278 aaataactagaccatcgacccgtgctaacgcactggtcatatggaaggtaatatttcacggtaataggtaacaaaatagtttagatgaatgtcat 19121372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 17413501 - 17413597
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||||||||   | |||||  |||||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  17413501 aactagaccatcgacccgtgtgttagcacggatcatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 17413597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 5399175 - 5399100
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtt 369  Q
    ||||||||||||| || | ||| |||||  |||||||||||||||||||||||  |||| | ||||||||||||||    
T  5399175 actagaccatcgatccatactaacgcacacgtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 5399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 389
Target Start/End: Original strand, 35392147 - 35392219
Alignment:
Q  317 cgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||| || |||| ||| |||||||||||  |||| | ||||||||||||||||||| ||| |||| |||||    
T  35392147 cgcacgggtgatatggaaagtaatatttgacggtaataggtaacaaaatagtttagatgaatatcatgattgt 35392219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 43622743 - 43622691
Alignment:
Q  337 taatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  43622743 taatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 43622691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 38029733 - 38029564
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttct 392  Q
    ||||||||||||||||||||||| | ||||  |||||| |||||||||||||||  |||| | ||||||||||||||||||| ||||| || |||||  |    
T  38029733 aactagaccatcgacccgtgctaacacacggatcatattgaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgttatgattgtcat 38029634  T
Q  393 -gattaaattcataatattaattatcatagacattggtactgtatcatatcatattatgtccatgacatc 461  Q
      | ||| |||||||||||||  | ||||||| ||||||||||| |||| |||| ||| |||||||||||    
T  38029633 atagtaatttcataatattaagaagcatagacgttggtactgtaccataacataatatttccatgacatc 38029564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 293 - 384
Target Start/End: Complemental strand, 729104 - 729013
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcata 384  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||  |||| | ||||| ||||||||||||| |||||||||    
T  729104 aactagaccatcgacccgtgctaacgtacgggtcatatcgaaggtaatatttgacggtaataggtaaccaaatagtttagatgaatgtcata 729013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 36159521 - 36159375
Alignment:
Q  299 accatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgatta- 397  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||| ||  || |     
T  36159521 accatcgacccgtgctaacgcacgagtcatatgaaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattg-tcatataat 36159423  T
Q  398 aattcataatattaattatcatagacattggtactgtatcatatcata 445  Q
    | |||||||||||||  | ||||||| ||||||||||| |||| ||||    
T  36159422 atttcataatattaagaagcatagacgttggtactgtaccataacata 36159375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 16718977 - 16718882
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||||||||  | ||||| || |||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  16718977 actagaccatcgacccgtgcattagcacgggttatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 16718882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 17693187 - 17693092
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||||||||  | ||||| || |||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  17693187 actagaccatcgacccgtgcattagcacgggttatatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 17693092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 29322729 - 29322634
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||| |||||| |||||||||| |||||  ||||||| |||||||||||||||  |||| |  |||||||||||||||||| ||||||||||||||    
T  29322729 actaaaccatctacccgtgctaacgcaccggtcatatggaaggtaatatttgacggtaatagataacaaaatagtttagatgaatgtcataattgt 29322634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 39703883 - 39703978
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||| || |||  |||| | ||| ||||||||||||||| |||||||| |||||    
T  39703883 actagaccatcgacccgtgctaacgcacgggtcatttcgaaggtaaaatatgacggtaataggtagcaaaatagtttagatgaatgtcatgattgt 39703978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 383
Target Start/End: Original strand, 40462315 - 40462404
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcat 383  Q
    |||||||||||||||||||||| |||||| |||||||  ||||||||||||||  ||||   |||| |||||||||||||| ||||||||    
T  40462315 actagaccatcgacccgtgctaacgcacgggtcatatgaaaggtaatatttgatggtaattggtaataaaatagtttagatgaatgtcat 40462404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 26455312 - 26455241
Alignment:
Q  318 gcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||| |||||||||||||||||||||||  |||| |  ||||||||||||||||||||||||||| |||||    
T  26455312 gcacgggtcatatcgaaggtaatatttgacggtaatagataacaaaatagtttagataaatgtcatgattgt 26455241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 34405054 - 34405149
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||  ||||||| || ||| || |||| |||||||||||||||  |||| | |||||||||||||||| || |||||||| |||||    
T  34405054 actagaccatcgattcgtgctaacgtacgggtaatatggaaggtaatatttgacggtaataagtaacaaaatagtttaaatgaatgtcatgattgt 34405149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 24396474 - 24396536
Alignment:
Q  327 atatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||| |||||||||||||||  |||| | ||||||||||| ||||||| |||||||| |||||    
T  24396474 atatggaaggtaatatttgacggtaataggtaacaaaataatttagatgaatgtcatgattgt 24396536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 2732828 - 2732881
Alignment:
Q  336 gtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  2732828 gtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 2732881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 20078113 - 20078065
Alignment:
Q  336 gtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcata 384  Q
    |||||||||||  |||| | ||||||||||||||||||| |||||||||    
T  20078113 gtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcata 20078065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 1259 - 1354
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||| |||||||| |||||| ||||||| ||||||||||||||| ||||| |  |||||||||||||||||| |||||||| |||||    
T  1259 actagaccatcgatccgtgctaacgcacgggtcatatggaaggtaatatttgacagtaatagataacaaaatagtttagatgaatgtcatgattgt 1354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 441
Target Start/End: Original strand, 25629537 - 25629650
Alignment:
Q  328 tatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgttctgattaaattcataatattaattatcatagacattg 427  Q
    ||||||||||||||||||    ||||||||||||||||||||||| | |||||||||||||| || ||| || ||||||||||||||| ||||||| |||    
T  25629537 tatcgaaggtaatatttggcgctaacatgtaacaaaatagtttagttgaatgtcataattgtcctaattcaaatcataatattaattaccatagacgttg 25629636  T
Q  428 gtactgtatcatat 441  Q
     |||| || |||||    
T  25629637 ttactttaccatat 25629650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 41842816 - 41842915
Alignment:
Q  290 aataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||||||||||||||  ||||  ||||||| ||| ||||||| |||  |||| | ||||||||||||||||||| |||||||| |||||    
T  41842816 aataactagaccatcgacccgtgctaatgcacaggtcatatggaaagtaatatctgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 41842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 34893023 - 34893119
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||| ||||||||||| ||||| |||||||  || ||||||||||||  |||| | ||||||||| |||||| || ||||||||||||||    
T  34893023 aactagaccattgacccgtgctaacgcacaagtcataaggagggtaatatttgacggtaataggtaacaaaacagtttaaatgaatgtcataattgt 34893119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 372
Target Start/End: Complemental strand, 37063999 - 37063918
Alignment:
Q  291 ataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttag 372  Q
    ||||||||||||| |||||||||  | ||||| ||||||||||| ||||||||||| | ||| | |||||||||||||||||    
T  37063999 ataactagaccattgacccgtgcgttagcacgggtcatatcgaaagtaatatttgacaataataagtaacaaaatagtttag 37063918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 16913160 - 16913244
Alignment:
Q  306 acccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgt-aacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||| |||||| ||||||| |||||||||||||||  |||| |||| ||||||||||||||||| || ||||| |||||    
T  16913160 acccgtgctaacgcacgggtcatatggaaggtaatatttgacggtaatatgtaaacaaaatagtttagatgaaagtcatgattgt 16913244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 26531573 - 26531509
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagatttgaggg 67  Q
    |||||||| ||||||||||||||||| |||||| ||||| ||||| || ||||||||||||||||    
T  26531573 agggttttcaaataaaagagaccatgatttgcacgcacaagtaaaccgcttgagagatttgaggg 26531509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 27853769 - 27853823
Alignment:
Q  287 ataaataactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaata 341  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  27853769 ataaacaactagaccatcgacccgtgctaacgcacgggtcatattgaaggtaata 27853823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 27183173 - 27183114
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagattt 62  Q
    |||||||||||||||||||||||||| |||| |  |||| |||||||| |||||||||||    
T  27183173 agggttttgaaataaaagagaccatgatttggaaacacaagtaaatcgcttgagagattt 27183114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 27231112 - 27231171
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagattt 62  Q
    |||||||||||||||||||||||||| |||| |  |||| |||||||| |||||||||||    
T  27231112 agggttttgaaataaaagagaccatgatttggaaacacaagtaaatcgcttgagagattt 27231171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 15096696 - 15096793
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgt-aacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||| ||||| ||  |||| || ||| || ||||||||||||||||||||  |||| | || || |||||||||||||| ||||||||||||||    
T  15096696 aactagactatcgaaccaagctaacgtacgggttatatcgaaggtaatatttgatggtaataggttaaaaaaatagtttagatgaatgtcataattgt 15096793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 12721570 - 12721475
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagatttgaggggtaatttggaaagaatagagaaggaaatgtc 98  Q
    ||||||||| ||||||||| |||||| |||     |||| || ||||||||||||||||| || || |||||||| ||||||||||| | ||||||    
T  12721570 agggttttggaataaaagaaaccatgattttttaacacaagtgaatcgtttgagagatttaagcggcaatttggagagaatagagaaagcaatgtc 12721475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 31135858 - 31135905
Alignment:
Q  3 agggttttgaaataaaagagaccatggtttgcatgcacacgtaaatcg 50  Q
    |||||||| ||||||||||||||||||||||||| |||| | ||||||    
T  31135858 agggttttcaaataaaagagaccatggtttgcatacacatgcaaatcg 31135905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 12646302 - 12646273
Alignment:
Q  3 agggttttgaaataaaagagaccatggttt 32  Q
    ||||||||||||||||||||||||||||||    
T  12646302 agggttttgaaataaaagagaccatggttt 12646273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 17835 - 17760
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtt 369  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||| ||||||||||||||||    
T  17835 actagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagtt 17760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 25727 - 25652
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtt 369  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||| ||||||||||||||||    
T  25727 actagaccatcgacccgtgctaatgcacgagtcatttcgaaggtaatatttgacggtaatatgtaacaaaatagtt 25652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 37995464 - 37995369
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||| | ||||  |||||| |||||||||||||||  |||  | |||||||||||||||||||||||||||| |||||    
T  37995464 actagaccatcgacccgtgctaacacacggatcatatggaaggtaatatttgacggtagtaggtaacaaaatagtttagataaatgtcatgattgt 37995369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 12008478 - 12008555
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagttt 370  Q
    ||||||||||| ||||||||||| | |||| ||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  12008478 aactagaccattgacccgtgctaacacacgggtcatatcgaaggtaatatttgacagtaatagataacaaaatagttt 12008555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 10128587 - 10128652
Alignment:
Q  324 gtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  10128587 gtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 10128652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 25882661 - 25882733
Alignment:
Q  297 agaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtt 369  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||||||  |||| | ||||||||||||||    
T  25882661 agaccatcaacccgtgctaacgcacatgtcatatcgaaggtaatatttgacggtaataggtaacaaaatagtt 25882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 87924 - 87829
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||| ||||| || ||||| ||||||||||||||  ||| ||||||||||  |||| ||||||||||||||||||||| |||||||| |||||    
T  87924 actagactatcgatccttgctaacgcacgagtcatatgaaagataatatttgacggtaatatgtaacaaaatagtttagatgaatgtcatgattgt 87829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 50290430 - 50290335
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||||||||||||||||||||| |||||| ||||||| ||| |||||||||||  |||| | |||  |||||||||||||| |||||||| |||||    
T  50290430 actagaccatcgacccgtgctaacgcacgggtcatatggaacgtaatatttgacggtaataggtagaaaaatagtttagatgaatgtcatgattgt 50290335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 39268247 - 39268340
Alignment:
Q  296 tagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||| |||| |||||| ||||||||||| |||||||||||   ||| | |||||||| || ||||||| ||||||||||||||    
T  39268247 tagaccatcgacccgcgctaacgcacgggtcatatcgaatgtaatatttgacgataataggtaacaaagtactttagatgaatgtcataattgt 39268340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 8998898 - 8998819
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttag 372  Q
    ||||||||||| ||||||||||| |||||  ||||||||||| |||||||||||  |||| | |||||||||||||||||    
T  8998898 aactagaccattgacccgtgctaacgcacaggtcatatcgaatgtaatatttgacggtaataggtaacaaaatagtttag 8998819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 382
Target Start/End: Original strand, 49193134 - 49193217
Alignment:
Q  299 accatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtca 382  Q
    ||||| || |||||||| |||||| ||||||| ||| |||||||||||  |||| | ||||||||||| ||||| | |||||||    
T  49193134 accattgatccgtgctaacgcacgtgtcatattgaatgtaatatttgacggtaataggtaacaaaataatttagttgaatgtca 49193217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 23085899 - 23085936
Alignment:
Q  293 aactagaccatcgacccgtgctatcgcacgagtcatat 330  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  23085899 aactagaccatcgacccgtgctaacgcacgggtcatat 23085936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 52407913 - 52407969
Alignment:
Q  332 gaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattg 388  Q
    |||||||| ||||||  |||| | ||||||||||||||||||| |||||||| ||||    
T  52407913 gaaggtaacatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattg 52407969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 12588 - 12683
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    ||||||||||||||||||||||  ||||| ||||||| ||| |||||||||||  |||| | |||||||||||||||| || |||| ||| |||||    
T  12588 actagaccatcgacccgtgctaatgcacgggtcatatggaatgtaatatttgacggtaataggtaacaaaatagtttaaatgaatgacatgattgt 12683  T

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Target: scaffold1155 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 68 - 156
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtca 382  Q
    |||||||||||||||  ||||| |||||| || ||||||||||||||||| ||  |||| | ||||| ||||||||||||| |||||||    
T  68 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 156  T

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Target: scaffold0642 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 238 - 150
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtca 382  Q
    |||||||||||||||  ||||| |||||| || ||||||||||||||||| ||  |||| | ||||| ||||||||||||| |||||||    
T  238 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 150  T

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Target: scaffold0345 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 10149 - 10061
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtca 382  Q
    |||||||||||||||  ||||| |||||| || ||||||||||||||||| ||  |||| | ||||| ||||||||||||| |||||||    
T  10149 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 10061  T

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Target: scaffold0105 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 28831 - 28919
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtca 382  Q
    |||||||||||||||  ||||| |||||| || ||||||||||||||||| ||  |||| | ||||| ||||||||||||| |||||||    
T  28831 actagaccatcgaccgctgctaacgcacgggttatatcgaaggtaatattagacggtaataggtaactaaatagtttagatgaatgtca 28919  T

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Target: scaffold0831 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 2146 - 2228
Alignment:
Q  12 aaataaaagagaccatggtttgcatgcacacgtaaatcgtttgagagatttgaggggtaatttggaaagaatagagaaggaaa 94  Q
    |||||||||||||||||  ||||||||||| |||||||| ||||||||||| || |||| |||||| | ||||  ||||||||    
T  2146 aaataaaagagaccatgacttgcatgcacaagtaaatcgcttgagagatttaagaggtagtttggagaaaataacgaaggaaa 2228  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 8829 - 8891
Alignment:
Q  327 atatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcataattgt 389  Q
    |||| |||||||||||||||  |||| | ||||||||||||||||||| |||||||| |||||    
T  8829 atatggaaggtaatatttgacggtaataggtaacaaaatagtttagatgaatgtcatgattgt 8891  T

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Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 384
Target Start/End: Original strand, 13602 - 13691
Alignment:
Q  294 actagaccatcgacccgtgctatcgcacgagtcatatcgaaggtaatatttgagagtaacatgtaacaaaatagtttagataaatgtcata 384  Q
    |||||||||||||||||||||| |||||  || ||||||||| | ||||||||  |||| |  |||||||||||||||||| | |||||||    
T  13602 actagaccatcgacccgtgctaacgcacaggttatatcgaagat-atatttgatggtaatagataacaaaatagtttagatgattgtcata 13691  T

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