View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9863_high_29 (Length: 297)
Name: NF9863_high_29
Description: NF9863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9863_high_29 |
 | |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
| [»] scaffold0003 (2 HSPs) |
| | |
|
| [»] scaffold0070 (1 HSPs) |
| | |
|
| [»] scaffold0190 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 30426516 - 30426253
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30426516 |
ccacttaaggtctcaatttttgcttggaggttggtaaaggatcggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcgg |
30426417 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30426416 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcaggtgcggtcttggcttgg |
30426317 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
30426316 |
tgtttcaggcctagaccccattactgtatcagatcatttccttcagttctctcattccgcaggt |
30426253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 5802178 - 5802356
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaa-cctgatgcatcgcggaattctcttagatgcggatgcg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||| |
|
|
| T |
5802178 |
ccacttaaggtctcaatttttgcttggaggttggtaaaaaataggttgcctacaaggtcaaaacctgatgcatcgcggtatcctcttagattcggatgcg |
5802277 |
T |
|
| Q |
119 |
agttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggt |
197 |
Q |
| |
|
|||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5802278 |
agttgtttgttaggttgcggccaaatcgagacttctcagcatttatttatttcttgtggtttttatggcactttgtggt |
5802356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 35029299 - 35029091
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||||| | ||||||||||| |||||||| ||| || |||||| |||| || |||||||||| |
|
|
| T |
35029299 |
ccacttaaggtttctatttttgcttggaggttggtaaagaatcggttgcctacaaggtcaaatctgctgggtcgcggtgttcttttgcctgcggatgcgg |
35029200 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
| ||||||||||||||||||| | ||||| |||||||| |||||||||||||||| ||| |||||||||||||||| | || |||||||||||||||| |
|
|
| T |
35029199 |
gctgtttgttagggtgcggccttgtcgagacatctcaacacttatttatttcttgtgatttctatggcactttgtggtttaaggtgcggtcttggcttgg |
35029100 |
T |
|
| Q |
220 |
tgtttcagg |
228 |
Q |
| |
|
||| ||||| |
|
|
| T |
35029099 |
tgtctcagg |
35029091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 12331933 - 12331685
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||| | | ||||||| | ||||| |||||||| || || ||||||| || | ||| |||| |
|
|
| T |
12331933 |
ccacttaaggtctcaatttttgcttggtggttggtaaaaaataagctgcctactcgatcaaatctgatgcagcgtggtattctctcagcttcgggtgcgg |
12331834 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||| || ||||| | ||||| ||||| |||||||||| |||||| |||||||||||||||| ||| ||||| || |||| |||||||| |
|
|
| T |
12331833 |
gttgtttgttaggctgtggccacatcgagacttctcagcatttatttacatcttgtcgtttttatggcactttatggagtcaggtgaggtcctggcttgg |
12331734 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttc |
268 |
Q |
| |
|
||| ||||| | |||||||||| ||| ||||| || |||||||||||| |
|
|
| T |
12331733 |
tgtctcaggccccgaccccattattgtctcagatcacttccttcagttc |
12331685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 283
Target Start/End: Complemental strand, 14023392 - 14023229
Alignment:
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||| |||||||| |||||||||| ||||||||| | ||||||| || | ||| | |||||||| |
|
|
| T |
14023392 |
gttgtttgttagggtgcggagctgtggagacttctcagcatttattcatttcttgtgatttttatggttcattgtggtctcttgttcgggcgtggcttgg |
14023293 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
|||||| || | || ||| ||| ||| || |||||||| |||||||| ||||||| |||||| |
|
|
| T |
14023292 |
tgtttctggacctgatccctttattgtttccgaccattttcttcagtttactcattcaacaggt |
14023229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 36685921 - 36685658
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36685921 |
ccacttaaggtcttaatttttgcttggatgttggtaaaggatcggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
36685822 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
36685821 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcaggtgcggtcttgacttgg |
36685722 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
36685721 |
tgtttcaggcccagaccccattactgtatcagatcatttccttcagttctctcattccgcaggt |
36685658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 13889448 - 13889526
Alignment:
| Q |
147 |
agacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttc |
225 |
Q |
| |
|
|||| ||||||||||||||| | |||||||||||||||||| |||| ||| | |||||||||||||||| ||||| |
|
|
| T |
13889448 |
agacttctcaacatttatttttatcttgtggtttttatggctctttatggcaggcggtgcggtcttggcttggggtttc |
13889526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 24 - 283
Target Start/End: Complemental strand, 48117441 - 48117182
Alignment:
| Q |
24 |
ttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcgagttg |
123 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
48117441 |
ttaaggtctcaatttttgcttggaggttgacaaaggatcggttgcctaccaggtccaatctgatgcatcgcggtattctcttagatgcggatgcgggttg |
48117342 |
T |
|
| Q |
124 |
tttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtt |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
48117341 |
tttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcaggtgcggtcttggcttggtgtt |
48117242 |
T |
|
| Q |
224 |
tcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
||||| | ||||||||||||||||||||| ||||| ||||||||| |||||||| ||||| |
|
|
| T |
48117241 |
tcaggcccagaccccattactgtatcagatcattttcttcagttctctcattccgcaggt |
48117182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 30821800 - 30822063
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||||| | | ||||||| | ||||| |||||||| | || ||||| | || | |||||||| |
|
|
| T |
30821800 |
ccacttaaggtctcaatatttgcttggcggttggtaaaaaataagctgcctactcgatcaaatctgatgcagcatggtattctttcagcttcggatgcgg |
30821899 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
| |||||||| | ||||| || | ||||| ||||| |||||||||| |||||| |||||||||||||||||||| ||||| | |||||||||||||| |
|
|
| T |
30821900 |
ggtgtttgttgagatgcggacacatcgagacttctcagcatttatttacctcttgtagtttttatggcactttgtggagtcaggtacggtcttggcttgg |
30821999 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
||| ||||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |||||| |
|
|
| T |
30822000 |
tgtctcaggccccgaccccattattgtctcagatcacttccttcagttctctcattcaacaggt |
30822063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 276
Target Start/End: Complemental strand, 38295700 - 38295569
Alignment:
| Q |
144 |
ttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattac |
243 |
Q |
| |
|
||||||| |||||||||||||| || ||| ||| ||||||||||||| | ||| | || |||||||||||||||| || ||||| | |||||| || |
|
|
| T |
38295700 |
ttgagacttctcaacatttattcatatct-gtgatttttatggcactctttggcataaggtgcggtcttggcttggagtctcaggcccagacccttttca |
38295602 |
T |
|
| Q |
244 |
tgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| ||||| |||||| |||||||| ||||||| |
|
|
| T |
38295601 |
tgtctcagatcatttctttcagttcactcattc |
38295569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 26146292 - 26146035
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| | |
|
|
| T |
26146292 |
ccacttaaggtctcaatttttgcttggaggttggtaaaggatcggttgcctaccaggtcaaacttgatgcatcgcggtattctcttagatgcg------a |
26146199 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| |
|
|
| T |
26146198 |
gttgtttgttagggtgtggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcaggtacggtcctggcttgg |
26146099 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
26146098 |
tgtttcaggcccagacctcattactgtatcagatcatttccttcagttctctcattccgcaggt |
26146035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 43310336 - 43310075
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| | |||||||||| |||||||||| |||||||||||| |||||||||||| |||||||| |
|
|
| T |
43310336 |
ccacttaaggtctcaatttttacttggaggttggtaaagaataggttgcctacaaggtcaaacccgatgcatcgcggtattctcttagattcggatgcgg |
43310237 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||| |||||||| | ||||||||||| |||||||| | |||| ||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
43310236 |
gttgtttgttaggatgcggccatatcgagacgtctcagcatttatt--tgtcttatggtttttatggcactttgtggtgtaaggtgcggtcttggcttgg |
43310139 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattccacaggt |
283 |
Q |
| |
|
||| ||||| | |||| |||||||||||||||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
43310138 |
tgtctcaggcccagacaccattactgtatcagatcatttccttcagttctctcattccgcaggt |
43310075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 10688638 - 10688384
Alignment:
| Q |
22 |
acttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcgagt |
121 |
Q |
| |
|
||||||||||||||| ||||||||| | ||||||||| | |||||||||| | ||||| |||||||||||| | || ||||||| | |||| ||| || |
|
|
| T |
10688638 |
acttaaggtctcaatatttgcttggcggttggtaaagaataggttgcctacacgatcaaatctgatgcatcgctgtatcctcttagcttcggacgcgggt |
10688539 |
T |
|
| Q |
122 |
tgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtg |
221 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||||| |
|
|
| T |
10688538 |
tgtttgttagggtgcggccaaatcgagacttctcagcatttatttatttcttgtggtttttatggctctttgtggtttaaggtgcggtcttggcttggtg |
10688439 |
T |
|
| Q |
222 |
tttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
| ||||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |
|
|
| T |
10688438 |
tctcaggcccagaccccattgttgtctcagatcacttccttcagttctctcattc |
10688384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 276
Target Start/End: Original strand, 43724335 - 43724459
Alignment:
| Q |
152 |
tctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattactgtatcag |
251 |
Q |
| |
|
||||| |||||||| |||||||||| || ||||||||| ||||||| || | | | |||||| |||||| | ||||||| ||| ||||||| ||| |||| |
|
|
| T |
43724335 |
tctcagcatttattcatttcttgtgattattatggcacgttgtggtctcgggttcagtcttgacttggtatctcaggtccagatcccattattgtttcag |
43724434 |
T |
|
| Q |
252 |
accatttccttcagttccctcattc |
276 |
Q |
| |
|
| || ||||||||||| ||||||| |
|
|
| T |
43724435 |
agcacttccttcagtttactcattc |
43724459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 6995043 - 6995299
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||| || |||||||||| ||||||||||||||||||||||| || ||||||||| ||| ||| |
|
|
| T |
6995043 |
ccacttaaggtctcaatttttgcttagaggttggtaaaagataggttgcctacaaggtcaaacctgatgcatcgcggtatcctcttagattcggctgcag |
6995142 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||||| | | ||||| ||||| ||||||||||||||||||| ||||| |||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
6995143 |
gttgtttgttagggtgcggcccaatcgagacttctcagcatttatttatttcttgtgatttttgtggcactttgtggtttaagatgcggtattggcttgg |
6995242 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| |||| | ||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
6995243 |
tgtctcagacccagaccccattactgtatcagatcatttccttcagttctctcattc |
6995299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 141; Significance: 6e-74; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 19548547 - 19548803
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||||| ||||||||| || ||||||||| ||||| || |
|
|
| T |
19548547 |
ccacttaaggtctcaatttttgcttggaggttggtaataaataggttgcctacaaggtcaaacctttcgcatcgcggtatcctcttagattcggattcgg |
19548646 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| |
|
|
| T |
19548647 |
gttgtttgttagggtgcggccaattcgagacttctcagcatttatttatttcttgtggtttttatggcactttgtggtttcaggtgcggtcttgacttgg |
19548746 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| ||||| | | ||||||||||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
19548747 |
tgtctcaggcccaaaccccattactgtctcagatcatttccttcagttctctcattc |
19548803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 52251187 - 52251443
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||||||| | ||||||||||| |||||||| ||| ||| |||||| |||| || | ||| ||||| |
|
|
| T |
52251187 |
ccacttaaggtttccatttttgcttggaggttggtaaagaatcggttgcctacaaggtcaaatctgctgcgtcgcggtgttcttttggttgcagatgcag |
52251286 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| || |||||||||||||||| ||| |||||||||||||||| | || |||||||||||||||| |
|
|
| T |
52251287 |
actgtttgttagggtgcggccacgtcgagacatctcagcacttatttatttcttgtgatttctatggcactttgtggtttaaggtgcggtcttggcttgg |
52251386 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| ||||| | | |||||||| ||| ||||| |||||| |||||||| ||||||| |
|
|
| T |
52251387 |
tgtctcaggcccataccccattcatgtttcagatcatttctttcagttctctcattc |
52251443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 17700313 - 17700057
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||||| | | ||||||| | ||||| |||||||| || || ||||| | || | |||||||| |
|
|
| T |
17700313 |
ccacttaaggtctcaatatttgcttggcggttggtaaaaaataagctgcctactcgatcaaatctgatgcagcgtggtattctttcagcttcggatgcgg |
17700214 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
| |||||||| || |||| || | ||||| ||||| |||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
17700213 |
ggtgtttgttgggacgcggacacatcgagacttctcagcatttatttacctcttgtagtttttatggcactttgtggagtcaggtgcggtcttggcttgg |
17700114 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| ||||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |
|
|
| T |
17700113 |
tgtctcaggccccgaccccattattgtctcagatcacttccttcagttctctcattc |
17700057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 9109419 - 9109540
Alignment:
| Q |
146 |
gagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattactg |
245 |
Q |
| |
|
||||| ||||| |||||||| |||||||||| ||||||||| | ||||||| |||| | ||| ||||||||||||||||||| | |||||| ||| || |
|
|
| T |
9109419 |
gagacttctcagcatttattcatttcttgtgatttttatggatcgttgtggtctcaggttcgggcttggcttggtgtttcaggacccgacccctttattg |
9109518 |
T |
|
| Q |
246 |
tatcagaccatttccttcagtt |
267 |
Q |
| |
|
| ||||| ||||| |||||||| |
|
|
| T |
9109519 |
tttcagatcattttcttcagtt |
9109540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 228
Target Start/End: Original strand, 30616794 - 30616876
Alignment:
| Q |
146 |
gagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcagg |
228 |
Q |
| |
|
||||| ||||| |||||||||||||||| || |||||||||| || ||||| | || || |||||||||||||||| ||||| |
|
|
| T |
30616794 |
gagacttctcagcatttatttatttcttatgatttttatggctctctgtggcataaggtgaggtcttggcttggtgtctcagg |
30616876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 20 - 275
Target Start/End: Original strand, 64702 - 64957
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||||| | |||||||||| |||||||| ||||||| ||||| ||||||| ||| ||||||||| |
|
|
| T |
64702 |
ccacttaaggtctcaattttcgtttggaggttggtaaagaataggttgcctacaaggtcaaatctgatgcgtcgcgatgttctcttggattcggatgcga |
64801 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| ||||| |
|
|
| T |
64802 |
gttgtttgttaggatgcggccacgtcgagacatctcaacatttatttatttcttgtggtttttatggcactttgtggtttaaggtgcggtcttgtcttgg |
64901 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcatt |
275 |
Q |
| |
|
||| ||||||| ||||||||||||||| ||||| ||| || |||||||| |||||| |
|
|
| T |
64902 |
tgtctcaggtccagaccccattactgtttcagatcatctctttcagttctctcatt |
64957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 20 - 275
Target Start/End: Complemental strand, 133930 - 133675
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||||| | |||||||||| |||||||| ||||||| ||||| ||||||| ||| ||||||||| |
|
|
| T |
133930 |
ccacttaaggtctcaattttcgtttggaggttggtaaagaataggttgcctacaaggtcaaatctgatgcgtcgcgatgttctcttggattcggatgcga |
133831 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| ||||| |
|
|
| T |
133830 |
gttgtttgttaggatgcggccacgtcgagacatctcaacatttatttatttcttgtggtttttatggcactttgtggtttaaggtgcggtcttgtcttgg |
133731 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcatt |
275 |
Q |
| |
|
||| ||||||| ||||||||||||||| ||||| ||| || |||||||| |||||| |
|
|
| T |
133730 |
tgtctcaggtccagaccccattactgtttcagatcatctctttcagttctctcatt |
133675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 25019379 - 25019635
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||| | |||||||||| | ||||| |||||||||||||| || ||||||| | || | ||| |
|
|
| T |
25019379 |
ccacttaaggtctcaatatttgcttgacggttggtaaaaaattggttgcctacacgatcaaatctgatgcatcgcggtatcctcttagcttcgaacgcgg |
25019478 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| |
|
|
| T |
25019479 |
gttgtttgttagggtgcggccaaatcgagacttctcagcatttatttatttcttgtggtttttatggcactttgtggtttaaggtgcggtcttggcttgg |
25019578 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| ||| | | ||||||||||| ||| ||| | || |||||||||||| ||||||| |
|
|
| T |
25019579 |
tgtctcatgcccagaccccattattgtctcaaatcacttccttcagttctctcattc |
25019635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 77 - 276
Target Start/End: Original strand, 30573462 - 30573661
Alignment:
| Q |
77 |
tcaaacctgatgcatcgcggaattctcttagatgcggatgcgagttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtg |
176 |
Q |
| |
|
||||| |||||||| ||||| || |||| || | |||| || |||||||| |||||||||||||| | ||||| ||||| |||||||||||||| ||| |
|
|
| T |
30573462 |
tcaaatctgatgcagcgcggtatcctctcagcttcggacgcaggttgtttgctagggtgcggccaaatcgagacttctcagcatttatttatttcgtgta |
30573561 |
T |
|
| Q |
177 |
gtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||| | ||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |
|
|
| T |
30573562 |
gtttttatggcactttgtggagtcaggtgcggtcttggcttggtgtcttaggccctgaccccattattgtctcagatcacttccttcagttctctcattc |
30573661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 41805820 - 41806073
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||| ||||||||||| ||||||||| | |||||||| | ||||||||| | ||||| |||||||| || || ||||||| || | |||||||| |
|
|
| T |
41805820 |
ccactcaaggtctcaatatttgcttggcggttggtaaaaaataagttgcctacacgatcaaatctgatgcagcgtggtattctctcagcttcggatgcgg |
41805919 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||| | ||| ||| | ||||| ||||||||||||||||| |||||| |||||||||||||||||||| || || |||||||| ||||||| |
|
|
| T |
41805920 |
gttgtttgttacg---cggacaaatcgagacttctcaacatttatttatctcttgtagtttttatggcactttgtggagttaggtgcggtctgggcttgg |
41806016 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| |||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |
|
|
| T |
41806017 |
tgtctcagtccccgaccccattattgtctcagatcacttccttcagttctctcattc |
41806073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 9724744 - 9725000
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||| | | ||||||| | ||||| |||||||| | || ||||||| || | |||||||| |
|
|
| T |
9724744 |
ccacttaaggtctcaatttttgcttggcggttggtaaaaaataagctgcctactcgatcaaatctgatgcagtgtggtattctctcagcttcggatgcgg |
9724843 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||| |||||||| | ||||| |||||||||||||||| |||||| |||||||||||||||||||| ||||| || |||| |||||||| |
|
|
| T |
9724844 |
gttgtttgttaggatgcggccacatcgagacttctcaacatttatttacctcttgtagtttttatggcactttgtggagtcaggtgaggtcctggcttgg |
9724943 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
||| ||||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |
|
|
| T |
9724944 |
tgtctcaggccccgaccccattattgtctcagatcacttccttcagttctctcattc |
9725000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 26413176 - 26413285
Alignment:
| Q |
146 |
gagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattactg |
245 |
Q |
| |
|
||||| |||||||||||||| ||| | |||| |||||||||| |||||||| | || ||||||||||||||||||| ||||| | |||||| ||| || |
|
|
| T |
26413176 |
gagacttctcaacatttattcattacgtgtgatttttatggctctttgtggcataaggtgcggtcttggcttggtgtctcaggaccagaccctcttaatg |
26413275 |
T |
|
| Q |
246 |
tatcagacca |
255 |
Q |
| |
|
| |||||||| |
|
|
| T |
26413276 |
tctcagacca |
26413285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 21077063 - 21076954
Alignment:
| Q |
158 |
catttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattactgtatcagaccatt |
257 |
Q |
| |
|
|||||||| |||||||| | ||||||||||| | ||||| || | ||||||||||||||||| ||||||| | |||| ||||||| ||||| || | |
|
|
| T |
21077063 |
catttattcatttcttgcgatttttatggcattctgtggcagaaggtacggtcttggcttggtgtctcaggtccaaacccttttactgtttcagatcact |
21076964 |
T |
|
| Q |
258 |
tccttcagtt |
267 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21076963 |
tctttcagtt |
21076954 |
T |
|
Back To:
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Target: scaffold0003 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 113 - 276
Target Start/End: Complemental strand, 366882 - 366719
Alignment:
| Q |
113 |
gatgcgagttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtctt |
212 |
Q |
| |
|
|||||| ||||||||||||||||| | ||| | ||||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
366882 |
gatgcgggttgtttgttagggtgcagacaaatcgagacttctcagcatttatttatttcttgtagtttttatggcactttgtggagtcaggtgcggtctt |
366783 |
T |
|
| Q |
213 |
ggcttggtgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
|||||||||| | ||| | |||||||||| ||| ||||| || |||||||||||| ||||||| |
|
|
| T |
366782 |
ggcttggtgtcttaggccccgaccccattattgtctcagatcacttccttcagttctctcattc |
366719 |
T |
|
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Target: scaffold0003; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 367082 - 366891
Alignment:
| Q |
20 |
ccacttaaggtctcaatttttgcttggagattggtaaaggaccggttgcctaccaggtcaaacctgatgcatcgcggaattctcttagatgcggatgcga |
119 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||| | ||||||||| | ||||| |||||||| || || ||||||| || | | |||||| |
|
|
| T |
367082 |
ccacttaaggtctcaatatttgcttggcgattggtaaaaaataagttgcctacacgatcaaatctgatgcaacgtggtattctctcagcttcagatgcgg |
366983 |
T |
|
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtct |
211 |
Q |
| |
|
||||||||| ||||||| | ||| | ||||| ||||| |||||||||||||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
366982 |
gttgtttgtcagggtgcagacaaatcgagacttctcagcatttatttatttcttgtagtttttatggcactttgtggagtcaagtgcggtct |
366891 |
T |
|
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Target: scaffold0070 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 26626 - 26470
Alignment:
| Q |
120 |
gttgtttgttagggtgcggccaacttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttgg |
219 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||| |||||||| |||||||||| |||||||||| | ||||||| |||| | ||| |||||||||| |
|
|
| T |
26626 |
gttgtttgttagggtgcggagctgtagagacttctcagcatttattcatttcttgtgatttttatggctcgttgtggtctcaggttcgggcttggcttgg |
26527 |
T |
|
| Q |
220 |
tgtttcaggtctagaccccattactgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
|||||||||| |||||| ||| ||| ||||| |||||||||||||| ||||||| |
|
|
| T |
26526 |
agtttcaggtcccgacccctttattgtttcagatcatttccttcagtttactcattc |
26470 |
T |
|
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Target: scaffold0190 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0190
Description:
Target: scaffold0190; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 276
Target Start/End: Original strand, 3788 - 3920
Alignment:
| Q |
144 |
ttgagacgtctcaacatttatttatttcttgtggtttttatggcactttgtggtgtcagatgcggtcttggcttggtgtttcaggtctagaccccattac |
243 |
Q |
| |
|
||||||| |||||||||||||| || ||||||| ||||||||| ||| | ||| |||| |||| ||||||||||| || ||||| | |||||| || |
|
|
| T |
3788 |
ttgagacttctcaacatttattcatctcttgtgatttttatggaactctttggcatcaggtgcgctcttggcttggagtctcaggcccagacccttttca |
3887 |
T |
|
| Q |
244 |
tgtatcagaccatttccttcagttccctcattc |
276 |
Q |
| |
|
| | ||||| |||||| |||||||| ||||||| |
|
|
| T |
3888 |
tttttcagatcatttctttcagttcactcattc |
3920 |
T |
|
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