View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9863_high_42 (Length: 249)
Name: NF9863_high_42
Description: NF9863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9863_high_42 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26984333 - 26984092
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26984333 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
26984234 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26984233 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
26984134 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26984133 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
26984092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14315959 - 14315725
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14315959 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
14315860 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14315859 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
14315760 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcct |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
14315759 |
gcattaaccatttctaccaaagttctattcttcct |
14315725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 12854536 - 12854777
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
12854536 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
12854635 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12854636 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
12854735 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12854736 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
12854777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26053881 - 26054122
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26053881 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
26053980 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26053981 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgatgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
26054080 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26054081 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
26054122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 26063240 - 26063481
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26063240 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
26063339 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26063340 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgatgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
26063439 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26063440 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
26063481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 14613177 - 14613418
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14613177 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
14613276 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14613277 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcttttagataatccagaataggacaacatg |
14613376 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
14613377 |
acattaaccatttttaccaaagttctattcttcctttctgct |
14613418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 35093775 - 35094016
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
35093775 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
35093874 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35093875 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
35093974 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35093975 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
35094016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9874884 - 9874643
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9874884 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
9874785 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9874784 |
tgttttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
9874685 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9874684 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
9874643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 39906705 - 39906946
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
39906705 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgttttcaaagttcatatggggt |
39906804 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39906805 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
39906904 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39906905 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
39906946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 5478863 - 5478622
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5478863 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
5478764 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5478763 |
tattttgttccttttgtttggaaccctattaaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
5478664 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5478663 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
5478622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 6855399 - 6855158
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6855399 |
tctttctttttggttcagacactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
6855300 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6855299 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
6855200 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6855199 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
6855158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 10588639 - 10588398
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10588639 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
10588540 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10588539 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
10588440 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
10588439 |
gcattaaccatttttaccaaagttctattcttcctttctgct |
10588398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4052667 - 4052908
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
4052667 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaaactttctttgtttccaaagttcatatggggt |
4052766 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4052767 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgttgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
4052866 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4052867 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
4052908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 10675395 - 10675154
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10675395 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaacttttaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
10675296 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10675295 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgttgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
10675196 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10675195 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
10675154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 31078851 - 31078610
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
31078851 |
tctttcttttaggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagttttctttgtttccaaagttcatatggggt |
31078752 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31078751 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
31078652 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31078651 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
31078610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 71 - 242
Target Start/End: Original strand, 8462559 - 8462730
Alignment:
| Q |
71 |
ctttctttgtttccaaagttcatatggggttattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatat |
170 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8462559 |
ctttctttgttttcaaagttcatatggggttattttattccttttgtttggaaccctatttaggatgtaacatgctgttagcattgcttcaccccaatat |
8462658 |
T |
|
| Q |
171 |
cctttagataatccagaataggacaacatggcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8462659 |
cctttagataatccagaataggacaacatggcattaaccatttctaccaaagttctattcttcctttctgct |
8462730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 8461173 - 8461246
Alignment:
| Q |
3 |
tttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttct |
76 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8461173 |
tttctttttggttcagtcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttct |
8461246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 28577157 - 28577398
Alignment:
| Q |
1 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagactaagctttctttgtttccaaagttcatatggggt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28577157 |
tctttctttttggttcaggcactttcacaattgctctacaaccccaaactttcaaataattaagagtaagctttctttgtttccaaagttcatatggggt |
28577256 |
T |
|
| Q |
101 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccagaataggacaacatg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28577257 |
tattttgttccttttgtttggaaccctattgaggatgtaacatgctgttagcattgcttcaccccaatatcctttagataatccataataggacaacatg |
28577356 |
T |
|
| Q |
201 |
gcattaaccatttctaccaaagttctattcttcctctctgct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28577357 |
gcattaaccatttctaccaaagttctattcttcctttctgct |
28577398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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