View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9863_low_55 (Length: 240)
Name: NF9863_low_55
Description: NF9863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9863_low_55 |
 | |
|
| [»] chr8 (2 HSPs) |
| |
|
| [»] chr7 (4 HSPs) |
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| [»] chr5 (2 HSPs) |
| |
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| [»] chr4 (1 HSPs) |
| |
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| [»] chr3 (8 HSPs) |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 26984597 - 26984375
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26984597 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
26984498 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26984497 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
26984398 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
26984397 |
ctgtatgctttgctattttctgc |
26984375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 14316223 - 14316001
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14316223 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
14316124 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
14316123 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaaaagaatatgagtcattcgattcaatagtcaagaat |
14316024 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
14316023 |
ctgtatgctttgctattttctgc |
14316001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 12854272 - 12854494
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12854272 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
12854371 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
12854372 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
12854471 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
12854472 |
ctgtatgctttgctattttctgc |
12854494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 14612913 - 14613135
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14612913 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
14613012 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
14613013 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcatttgattcaatagtcaagaat |
14613112 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
14613113 |
ctgtatgctttgctattttctgc |
14613135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 26053617 - 26053839
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
26053617 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatattcttggg |
26053716 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26053717 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
26053816 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
26053817 |
ctgtatgctttgctattttctgc |
26053839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 26062976 - 26063198
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
26062976 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatattcttggg |
26063075 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26063076 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
26063175 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
26063176 |
ctgtatgctttgctattttctgc |
26063198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 9875148 - 9874926
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9875148 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
9875049 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9875048 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
9874949 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
9874948 |
ctgtatgctttgctattttctgc |
9874926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 39906441 - 39906659
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
39906441 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
39906540 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
39906541 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
39906640 |
T |
|
| Q |
218 |
ctgtatgctttgctatttt |
236 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
39906641 |
ctgtatgctttgctatttt |
39906659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 35093511 - 35093733
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
35093511 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
35093610 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
35093611 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
35093710 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
35093711 |
ctgtatgctttgctattttctgc |
35093733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 4052403 - 4052625
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4052403 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
4052502 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4052503 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
4052602 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
4052603 |
ctgtatgctttgctattttctgc |
4052625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 6855663 - 6855441
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6855663 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
6855564 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6855563 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
6855464 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
6855463 |
ctgtatgctttgctattttctgc |
6855441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 31079114 - 31078893
Alignment:
| Q |
19 |
gatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
31079114 |
gatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggga |
31079015 |
T |
|
| Q |
119 |
taagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaatc |
218 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31079014 |
taagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaatc |
31078915 |
T |
|
| Q |
219 |
tgtatgctttgctattttctgc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
31078914 |
tgtatgctttgctattttctgc |
31078893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 10588903 - 10588681
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10588903 |
ggatcctcttacttcttctaagttctaaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
10588804 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10588803 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
10588704 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
10588703 |
ctgtatgctttgctattttctgc |
10588681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 8460907 - 8461129
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
8460907 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatattcttggg |
8461006 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8461007 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
8461106 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
8461107 |
ctttatgctttgctattttctgc |
8461129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 10675659 - 10675437
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10675659 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
10675560 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10675559 |
ataagaaattgagttaaatccatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
10675460 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
10675459 |
ctgtatgttttgctattttctgc |
10675437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 5479096 - 5478982
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5479096 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
5478997 |
T |
|
| Q |
118 |
ataagaaatttagtt |
132 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
5478996 |
ataagaaattgagtt |
5478982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 5478983 - 5478905
Alignment:
| Q |
162 |
ttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaatctgtatgctttgctattttctgc |
240 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5478983 |
ttgactcaattactctattaacagaatatgagtcattcgattcaatagtcaagaatctgtatgctttgctattttctgc |
5478905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 28576893 - 28577115
Alignment:
| Q |
18 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaagttttgaacattagaatgaacaatatccttggg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
28576893 |
ggatcctcttacttcttctaagttctgaaccatccaatgtatctatatcagattcattgttttctaaattttgaacattagaatgaacaatatccttggg |
28576992 |
T |
|
| Q |
118 |
ataagaaatttagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtaattcgattcaatagtcaagaat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28576993 |
ataagaaattgagttaaatctatcttcttgaaaaattgcatctcttgactcaattactgtattaacagaatatgagtcattcgattcaatagtcaagaat |
28577092 |
T |
|
| Q |
218 |
ctgtatgctttgctattttctgc |
240 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
28577093 |
ctgtatgctttgctattttctgc |
28577115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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