View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9864_low_14 (Length: 230)
Name: NF9864_low_14
Description: NF9864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9864_low_14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 21434090 - 21434313
Alignment:
| Q |
7 |
agagcacaaataaacttgggaaaaaactactttattnnnnnnnnttaaacaaccaaatgatacgatcctacaaaatcggctagtaagttataaatacaac |
106 |
Q |
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| T |
21434090 |
agagcacaaataaacttgggaaaaaactactttattaaaaaaaattaaacaaccaaatgatatgatcctacaaaatcggctagtaagttataaatacaac |
21434189 |
T |
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| Q |
107 |
tcattaatagcatccttcaaatatctcattctaaaatcgctcttttggtctaacatgagtttgtgcccaagggactataaaaatcataattgatctattt |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21434190 |
tcattaatagcatccttcaaatatctcattctaaaatcgctcttttggtctaaaatgagtttgtgcccaagggactataaaaatcataattgatctattt |
21434289 |
T |
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| Q |
207 |
attaaagcttataaaagactacca |
230 |
Q |
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|||||||||||||||||||||||| |
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| T |
21434290 |
attaaagcttataaaagactacca |
21434313 |
T |
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