View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9864_low_16 (Length: 216)

Name: NF9864_low_16
Description: NF9864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9864_low_16
NF9864_low_16
[»] chr5 (43 HSPs)
chr5 (25-216)||(7805079-7805268)
chr5 (25-216)||(14374143-14374332)
chr5 (20-216)||(24435762-24435956)
chr5 (50-216)||(13582613-13582777)
chr5 (119-216)||(17510066-17510161)
chr5 (119-216)||(26709110-26709207)
chr5 (119-216)||(26978844-26978941)
chr5 (119-216)||(24771349-24771444)
chr5 (119-216)||(36253834-36253929)
chr5 (119-216)||(42019581-42019676)
chr5 (119-213)||(41858604-41858696)
chr5 (119-216)||(17504961-17505056)
chr5 (127-216)||(37248795-37248883)
chr5 (127-213)||(1414051-1414135)
chr5 (119-216)||(24776804-24776902)
chr5 (119-216)||(41853556-41853651)
chr5 (127-216)||(12103032-12103120)
chr5 (127-216)||(26667279-26667367)
chr5 (127-216)||(26938876-26938964)
chr5 (127-216)||(29167973-29168061)
chr5 (127-216)||(36423644-36423732)
chr5 (127-216)||(556702-556790)
chr5 (127-216)||(561474-561562)
chr5 (127-216)||(36428716-36428804)
chr5 (127-216)||(36937511-36937599)
chr5 (127-216)||(36942265-36942353)
chr5 (127-201)||(28857885-28857958)
chr5 (127-216)||(7451765-7451853)
chr5 (127-216)||(12501899-12501987)
chr5 (127-216)||(32461549-32461637)
chr5 (127-216)||(39518417-39518505)
chr5 (127-216)||(39523056-39523144)
chr5 (127-216)||(42001441-42001529)
chr5 (127-213)||(35679875-35679960)
chr5 (127-216)||(6514601-6514689)
chr5 (127-216)||(10759820-10759907)
chr5 (127-216)||(12045139-12045227)
chr5 (123-216)||(13301482-13301573)
chr5 (127-216)||(41996672-41996760)
chr5 (129-213)||(40147905-40147988)
chr5 (127-212)||(3665943-3666027)
chr5 (127-212)||(12102831-12102915)
chr5 (127-212)||(31986738-31986822)
[»] chr1 (36 HSPs)
chr1 (25-216)||(10106111-10106300)
chr1 (20-216)||(13890821-13891016)
chr1 (20-216)||(38734283-38734478)
chr1 (20-216)||(26651058-26651253)
chr1 (25-216)||(5602322-5602512)
chr1 (25-213)||(14582110-14582297)
chr1 (25-209)||(19422771-19422958)
chr1 (115-216)||(39747153-39747252)
chr1 (119-216)||(11251105-11251200)
chr1 (119-216)||(37404408-37404503)
chr1 (119-216)||(36684707-36684802)
chr1 (119-216)||(37409529-37409624)
chr1 (119-216)||(3584609-3584704)
chr1 (119-216)||(5724987-5725082)
chr1 (119-216)||(27716451-27716546)
chr1 (119-202)||(48246675-48246756)
chr1 (122-216)||(34318219-34318311)
chr1 (119-216)||(5730113-5730208)
chr1 (138-216)||(11387841-11387917)
chr1 (127-216)||(10135463-10135551)
chr1 (127-216)||(23192817-23192905)
chr1 (127-216)||(33301180-33301268)
chr1 (127-216)||(40165987-40166075)
chr1 (138-209)||(27711319-27711388)
chr1 (89-216)||(41097914-41098039)
chr1 (127-209)||(19799013-19799094)
chr1 (127-216)||(51041463-51041549)
chr1 (116-215)||(33055047-33055144)
chr1 (127-213)||(18784549-18784633)
chr1 (127-216)||(12260003-12260091)
chr1 (127-216)||(47451225-47451313)
chr1 (127-213)||(10140099-10140184)
chr1 (127-213)||(25188272-25188357)
chr1 (127-216)||(16035615-16035703)
chr1 (175-216)||(25855178-25855219)
chr1 (124-212)||(12906166-12906251)
[»] chr4 (44 HSPs)
chr4 (20-216)||(653051-653246)
chr4 (20-213)||(10120701-10120893)
chr4 (62-213)||(8082962-8083112)
chr4 (119-216)||(8980277-8980372)
chr4 (119-216)||(8985397-8985492)
chr4 (119-216)||(13700518-13700613)
chr4 (119-216)||(21299825-21299920)
chr4 (119-216)||(21304945-21305040)
chr4 (62-216)||(24490039-24490192)
chr4 (119-216)||(54991494-54991589)
chr4 (119-216)||(36354184-36354279)
chr4 (119-216)||(36359302-36359397)
chr4 (119-216)||(39999077-39999172)
chr4 (119-216)||(40004035-40004130)
chr4 (119-216)||(41393253-41393348)
chr4 (119-216)||(51019365-51019460)
chr4 (119-216)||(53797637-53797732)
chr4 (119-216)||(54343211-54343306)
chr4 (119-216)||(54348365-54348460)
chr4 (119-210)||(13710682-13710771)
chr4 (119-216)||(13695167-13695262)
chr4 (119-216)||(47046299-47046394)
chr4 (119-216)||(9764013-9764108)
chr4 (127-216)||(5271419-5271507)
chr4 (127-216)||(12823895-12823983)
chr4 (127-216)||(13521992-13522080)
chr4 (127-216)||(16421036-16421124)
chr4 (127-216)||(31269041-31269129)
chr4 (127-216)||(31273528-31273616)
chr4 (127-216)||(37259877-37259965)
chr4 (127-216)||(37264564-37264652)
chr4 (112-212)||(30564399-30564498)
chr4 (127-215)||(31765894-31765981)
chr4 (127-213)||(31729387-31729472)
chr4 (127-216)||(10318779-10318867)
chr4 (116-210)||(34644571-34644664)
chr4 (127-216)||(8693718-8693806)
chr4 (116-209)||(17359546-17359638)
chr4 (127-213)||(8030476-8030561)
chr4 (127-216)||(33463356-33463444)
chr4 (149-213)||(39319642-39319705)
chr4 (128-216)||(42758756-42758843)
chr4 (127-170)||(51697969-51698012)
chr4 (127-216)||(55251727-55251814)
[»] chr8 (33 HSPs)
chr8 (20-216)||(33616618-33616814)
chr8 (20-216)||(19430022-19430217)
chr8 (20-216)||(19435524-19435719)
chr8 (20-216)||(19566171-19566366)
chr8 (20-216)||(19571673-19571868)
chr8 (20-216)||(31030536-31030732)
chr8 (80-216)||(13584358-13584500)
chr8 (121-216)||(42514368-42514461)
chr8 (119-216)||(21644073-21644168)
chr8 (119-216)||(17955781-17955876)
chr8 (119-216)||(32015708-32015803)
chr8 (119-216)||(24884720-24884816)
chr8 (119-213)||(43999222-43999314)
chr8 (127-216)||(15875668-15875756)
chr8 (127-216)||(31449866-31449954)
chr8 (127-216)||(38182237-38182325)
chr8 (127-216)||(44925923-44926011)
chr8 (127-216)||(19166641-19166729)
chr8 (127-216)||(40125885-40125973)
chr8 (127-216)||(43302718-43302807)
chr8 (127-216)||(17025942-17026030)
chr8 (127-216)||(17556434-17556522)
chr8 (127-216)||(18876367-18876454)
chr8 (127-216)||(33416554-33416642)
chr8 (127-212)||(36683590-36683674)
chr8 (129-212)||(1807483-1807565)
chr8 (178-216)||(32010546-32010584)
chr8 (127-216)||(24090634-24090722)
chr8 (127-216)||(34118473-34118561)
chr8 (127-213)||(1910969-1911054)
chr8 (127-216)||(17953873-17953961)
chr8 (129-210)||(28559656-28559736)
chr8 (175-216)||(40130733-40130774)
[»] chr3 (55 HSPs)
chr3 (20-216)||(13022035-13022230)
chr3 (20-213)||(53119538-53119731)
chr3 (20-216)||(33089235-33089430)
chr3 (20-216)||(20810380-20810575)
chr3 (68-213)||(38436932-38437075)
chr3 (62-216)||(26962067-26962218)
chr3 (119-216)||(17364071-17364168)
chr3 (119-216)||(17357844-17357941)
chr3 (119-216)||(3476938-3477033)
chr3 (119-216)||(17368727-17368822)
chr3 (126-216)||(54270652-54270740)
chr3 (119-216)||(4117592-4117687)
chr3 (119-216)||(20090654-20090749)
chr3 (119-216)||(20095779-20095874)
chr3 (119-216)||(34129161-34129256)
chr3 (119-216)||(55128798-55128893)
chr3 (119-216)||(3482415-3482510)
chr3 (119-216)||(15763022-15763117)
chr3 (119-216)||(15768183-15768278)
chr3 (112-216)||(21494287-21494390)
chr3 (125-216)||(27605133-27605223)
chr3 (126-215)||(2617255-2617343)
chr3 (119-216)||(30341836-30341931)
chr3 (127-216)||(758368-758456)
chr3 (127-216)||(23666123-23666211)
chr3 (127-216)||(24038371-24038459)
chr3 (127-216)||(39775728-39775816)
chr3 (127-216)||(3672591-3672679)
chr3 (127-216)||(3692623-3692711)
chr3 (127-216)||(14438695-14438783)
chr3 (127-216)||(18467230-18467318)
chr3 (127-216)||(20520059-20520147)
chr3 (127-216)||(8069685-8069772)
chr3 (127-216)||(7571218-7571306)
chr3 (127-216)||(8883175-8883263)
chr3 (127-216)||(49971424-49971512)
chr3 (119-216)||(10321450-10321546)
chr3 (129-204)||(26706803-26706877)
chr3 (127-216)||(32474680-32474766)
chr3 (151-216)||(1688910-1688974)
chr3 (127-216)||(3033649-3033737)
chr3 (127-216)||(3419000-3419088)
chr3 (116-168)||(795394-795446)
chr3 (116-216)||(10586172-10586270)
chr3 (127-215)||(12965873-12965960)
chr3 (176-216)||(25726841-25726881)
chr3 (20-106)||(38436850-38436938)
chr3 (127-212)||(12112641-12112725)
chr3 (127-168)||(27708988-27709029)
chr3 (127-170)||(18472057-18472100)
chr3 (127-170)||(23661464-23661507)
chr3 (127-213)||(55431323-55431408)
chr3 (127-216)||(29350245-29350333)
chr3 (172-216)||(6024127-6024171)
chr3 (149-213)||(31002707-31002770)
[»] scaffold0011 (2 HSPs)
scaffold0011 (50-216)||(1573-1738)
scaffold0011 (50-216)||(7054-7219)
[»] chr7 (36 HSPs)
chr7 (20-216)||(24528362-24528558)
chr7 (20-216)||(28292395-28292589)
chr7 (65-216)||(33226422-33226571)
chr7 (20-216)||(9973470-9973665)
chr7 (119-216)||(21081031-21081128)
chr7 (119-216)||(12934405-12934500)
chr7 (119-216)||(16539404-16539499)
chr7 (119-216)||(16626163-16626258)
chr7 (119-216)||(42571953-42572048)
chr7 (119-216)||(33238010-33238105)
chr7 (119-216)||(47998983-47999078)
chr7 (119-215)||(19309603-19309697)
chr7 (119-215)||(47993809-47993903)
chr7 (119-216)||(2234622-2234717)
chr7 (119-216)||(17495411-17495506)
chr7 (119-216)||(17557708-17557803)
chr7 (119-216)||(32212646-32212741)
chr7 (119-216)||(33243187-33243282)
chr7 (119-216)||(47177111-47177206)
chr7 (119-216)||(43892866-43892961)
chr7 (127-216)||(26341206-26341294)
chr7 (127-216)||(4579515-4579603)
chr7 (127-216)||(9650967-9651055)
chr7 (127-216)||(23246933-23247021)
chr7 (127-216)||(23866075-23866163)
chr7 (129-216)||(3357634-3357720)
chr7 (127-216)||(4930240-4930328)
chr7 (127-216)||(8076057-8076145)
chr7 (127-216)||(13314236-13314324)
chr7 (116-216)||(27256250-27256348)
chr7 (144-216)||(42627214-42627285)
chr7 (155-213)||(22857715-22857771)
chr7 (127-216)||(10388367-10388453)
chr7 (127-209)||(44423137-44423218)
chr7 (127-216)||(8268300-8268388)
chr7 (127-216)||(44510677-44510765)
[»] chr6 (38 HSPs)
chr6 (20-216)||(19478156-19478351)
chr6 (20-212)||(13604984-13605175)
chr6 (39-168)||(31495753-31495882)
chr6 (39-168)||(31501139-31501268)
chr6 (39-168)||(31515643-31515772)
chr6 (119-216)||(21396707-21396802)
chr6 (119-216)||(22698235-22698330)
chr6 (119-216)||(24192472-24192567)
chr6 (119-216)||(29491229-29491324)
chr6 (119-216)||(34142088-34142183)
chr6 (119-216)||(34154704-34154799)
chr6 (115-216)||(12182988-12183088)
chr6 (119-216)||(24191375-24191470)
chr6 (119-216)||(31981568-31981663)
chr6 (119-203)||(22703358-22703440)
chr6 (112-216)||(3901920-3902023)
chr6 (119-213)||(34375930-34376022)
chr6 (39-168)||(31475917-31476056)
chr6 (62-210)||(17281498-17281645)
chr6 (133-216)||(21401763-21401844)
chr6 (119-216)||(2818139-2818234)
chr6 (126-216)||(5600971-5601060)
chr6 (127-215)||(11570749-11570836)
chr6 (115-210)||(10642723-10642817)
chr6 (127-215)||(33687603-33687690)
chr6 (112-210)||(29325549-29325646)
chr6 (127-216)||(12688978-12689066)
chr6 (127-203)||(17964559-17964634)
chr6 (127-170)||(24589164-24589207)
chr6 (127-213)||(6407860-6407945)
chr6 (127-209)||(21309045-21309126)
chr6 (115-213)||(22713705-22713802)
chr6 (127-203)||(16836156-16836231)
chr6 (129-212)||(5740792-5740874)
chr6 (127-170)||(11614092-11614135)
chr6 (127-216)||(8747789-8747877)
chr6 (175-216)||(11428050-11428091)
chr6 (127-215)||(13736678-13736765)
[»] chr2 (34 HSPs)
chr2 (20-216)||(5089286-5089481)
chr2 (25-216)||(42914650-42914840)
chr2 (119-216)||(42723443-42723538)
chr2 (119-216)||(42728612-42728707)
chr2 (119-216)||(44096310-44096405)
chr2 (119-216)||(44754588-44754683)
chr2 (119-216)||(44759754-44759849)
chr2 (122-203)||(40392340-40392419)
chr2 (119-216)||(40518464-40518559)
chr2 (119-216)||(28751721-28751816)
chr2 (127-216)||(10160724-10160812)
chr2 (127-216)||(30658270-30658358)
chr2 (127-216)||(1934993-1935081)
chr2 (127-216)||(9180724-9180812)
chr2 (127-216)||(18344438-18344526)
chr2 (150-216)||(19538393-19538458)
chr2 (127-216)||(9189803-9189891)
chr2 (127-216)||(25497325-25497413)
chr2 (127-216)||(30650936-30651024)
chr2 (116-216)||(11658877-11658976)
chr2 (127-215)||(25478297-25478384)
chr2 (127-216)||(12796932-12797020)
chr2 (129-210)||(29677394-29677474)
chr2 (127-216)||(31326746-31326834)
chr2 (131-213)||(42926763-42926846)
chr2 (125-201)||(28945191-28945266)
chr2 (127-216)||(7737851-7737939)
chr2 (150-211)||(28855017-28855077)
chr2 (127-216)||(35601929-35602017)
chr2 (89-216)||(6297848-6297973)
chr2 (95-213)||(39542912-39543029)
chr2 (126-216)||(160048-160137)
chr2 (127-213)||(35638997-35639082)
chr2 (127-216)||(19578414-19578502)
[»] scaffold0132 (4 HSPs)
scaffold0132 (81-216)||(2726-2859)
scaffold0132 (81-216)||(10686-10819)
scaffold0132 (81-139)||(2627-2685)
scaffold0132 (81-139)||(10587-10645)
[»] scaffold0166 (2 HSPs)
scaffold0166 (119-216)||(13732-13827)
scaffold0166 (119-216)||(19187-19285)
[»] scaffold0014 (2 HSPs)
scaffold0014 (119-216)||(31553-31648)
scaffold0014 (122-210)||(26387-26473)
[»] scaffold0594 (1 HSPs)
scaffold0594 (119-216)||(9200-9295)
[»] scaffold0517 (1 HSPs)
scaffold0517 (119-216)||(3571-3666)
[»] scaffold0060 (1 HSPs)
scaffold0060 (119-216)||(37018-37113)
[»] scaffold0055 (1 HSPs)
scaffold0055 (119-216)||(3066-3161)
[»] scaffold0052 (1 HSPs)
scaffold0052 (119-216)||(81374-81469)
[»] scaffold0002 (1 HSPs)
scaffold0002 (127-216)||(4081-4169)
[»] scaffold0352 (1 HSPs)
scaffold0352 (127-216)||(7111-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (127-216)||(9887-9975)
[»] scaffold0067 (1 HSPs)
scaffold0067 (115-216)||(33956-34056)
[»] scaffold0045 (1 HSPs)
scaffold0045 (127-216)||(83073-83161)
[»] scaffold0020 (1 HSPs)
scaffold0020 (89-216)||(1188-1313)
[»] scaffold0012 (1 HSPs)
scaffold0012 (127-215)||(166086-166173)
[»] scaffold0057 (1 HSPs)
scaffold0057 (127-208)||(35649-35729)
[»] scaffold0008 (1 HSPs)
scaffold0008 (127-216)||(255824-255912)
[»] scaffold0027 (1 HSPs)
scaffold0027 (127-203)||(43124-43199)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 25 - 216
Target Start/End: Complemental strand, 7805268 - 7805079
Alignment:
Q  25 accgtattgaatagtttaatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgg 124  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805268 accgtattgaatagtttaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgg 7805169  T
Q  125 gctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  7805168 gctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtc 7805079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 216
Target Start/End: Complemental strand, 14374332 - 14374143
Alignment:
Q  25 accgtattgaatagtttaatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgg 124  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14374332 accgtattgaatagtttaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtgtataatcgtaacagtgatctgg 14374233  T
Q  125 gctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  14374232 gctgttttatcctggagacggcgtggttgttagtctaccctg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 14374143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 24435762 - 24435956
Alignment:
Q  20 tacgcaccgtattgaatagtttaatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtga 119  Q
    |||| ||||||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24435762 tacgtaccgtattgaatagtctaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtga 24435861  T
Q  120 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  24435862 tctgggctgttttatcctggagacggcgtggttgatagtctaccttg--cacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtc 24435956  T

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Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 50 - 216
Target Start/End: Original strand, 13582613 - 13582777
Alignment:
Q  50 gattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtg 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13582613 gattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtg 13582712  T
Q  150 gttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  13582713 gttgttagtctaccttg--cacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 13582777  T

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Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17510161 - 17510066
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  17510161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 17510066  T

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Target: chr5; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 26709207 - 26709110
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||| | || ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  26709207 atctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 26709110  T

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Target: chr5; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 26978941 - 26978844
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||| | || ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  26978941 atctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 26978844  T

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Target: chr5; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 24771349 - 24771444
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||  ||||||||| ||||||||||||    
T  24771349 atctgggttgttttatcctggagacggcgcggttgttagtctaccttg--cacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtc 24771444  T

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Target: chr5; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 36253929 - 36253834
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  36253929 atctgggctgttttatcctggaggcggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 36253834  T

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Target: chr5; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 42019676 - 42019581
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  42019676 atctgggctgttttatcctggagacggcacggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 42019581  T

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Target: chr5; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 41858696 - 41858604
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| |||||||||| |||| |||||||||| |||||||||    
T  41858696 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctg 41858604  T

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Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17505056 - 17504961
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| | ||||||||||    
T  17505056 atctgggctgttttatcctggagacgacgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtc 17504961  T

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Target: chr5; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 37248795 - 37248883
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  || ||||||||| |||||||||||||||||||||||||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttaggtagtgccacgaaatgtcttaaagagagcgacctggtc 37248883  T

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Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 1414051 - 1414135
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||  |||| ||||||||||||||| |||||||||| |||||||||    
T  1414051 tgttttatcttggagacggcgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacctg 1414135  T

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Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 24776804 - 24776902
Alignment:
Q  119 atctgggctgttttatcctggagacggcgt---ggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||||||||||||||||||||||||||||    ||||| ||||||||||||||||  |||| ||||||||||||||| |||||||||| |||||| ||||    
T  24776804 atctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacatggt 24776901  T

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Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 41853651 - 41853556
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||| | ||||||||| ||||| |||||||| |||||||  |||| ||||||| ||||||| |||||||||| ||||||||||||    
T  41853651 atctgggctgttttatcgtagagacggcgcggttgctagtctactttgcaca--acttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtc 41853556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 12103120 - 12103032
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 12103032  T

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Target: chr5; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 26667367 - 26667279
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 26667279  T

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Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 26938964 - 26938876
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 26938876  T

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Target: chr5; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 29167973 - 29168061
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 29168061  T

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Target: chr5; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 36423732 - 36423644
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||| |  ||||| |||||||||||| |||||||||||||||||||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccgcgaaacgtcttaaagagagcgacctggtc 36423644  T

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Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 556790 - 556702
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| | ||| |||||||||||||||||||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacaaaacgtcttaaagagagcgacctggtc 556702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 561562 - 561474
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| | ||| |||||||||||||||||||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacaaaacgtcttaaagagagcgacctggtc 561474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 36428804 - 36428716
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| ||| |||| ||| |||||||||||||||||||||||    
T  36428804 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagttccgcaaaacgtcttaaagagagcgacctggtc 36428716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 36937511 - 36937599
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| ||||||  |||| |||||||||||||||||||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 36937599  T

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Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 36942265 - 36942353
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| ||||||  |||| |||||||||||||||||||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 36942353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 28857958 - 28857885
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaa 201  Q
    |||||||||||| || ||||||||||||| |||||||||||||| ||||  ||||||||||||||| ||||||||    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcaca-aactcaggtagtgccgcgaaacgtcttaaa 28857885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 7451853 - 7451765
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| | ||||||||| |||||| ||||||||| |  ||||  |||||| ||||| |||||||||||||||||||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcaca-attttggacagtgccacgaaacgtcttaaagagagcgacctggtc 7451765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 12501899 - 12501987
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||   ||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 12501987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 32461549 - 32461637
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| | ||| |||||||||||||||||||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacaaaacgtcttaaagagagcgacctggtc 32461637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 39518505 - 39518417
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| || |||||| |  |||||  ||||| ||||| |||||||||||||||||||||||    
T  39518505 tgttttatcctggaggcggcgtggttgatagtctgccatgcaca-attttgggcggtgccacgaaacgtcttaaagagagcgacctggtc 39518417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 39523144 - 39523056
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  |||||  ||||| ||||| |||||||||||||||||||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcggtgccacgaaacgtcttaaagagagcgacctggtc 39523056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 42001529 - 42001441
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  ||| |||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 42001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 35679875 - 35679960
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  || |  |||||| ||||| ||||||||||||||||||||    
T  35679875 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-atttttgacagtgccacgaaacgtcttaaagagagcgacctg 35679960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 6514601 - 6514689
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| | |  ||||| |||||| ||||| ||||||||||||| ||| |||||    
T  6514601 tgttttatcctggaggcggcgtggttgatagtctgccttgca-aaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtc 6514689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 10759820 - 10759907
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| | ||| |||||||| ||||||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacaaaacgtcttaaa-agagcgacctggtc 10759907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 12045139 - 12045227
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||| | ||||||  |||||||| |  ||||| |||||| ||||| ||||||||||| |||||||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagggcgacctggtc 12045227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 13301482 - 13301573
Alignment:
Q  123 gggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| |  |  |||||||||||||||||||||| |  ||||||||||||| ||  ||||||||||| ||||||||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcaca-attttgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 13301573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 41996760 - 41996672
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  ||| |||| |  ||||| |||||| ||||| |||||||||||||| ||||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacaca-attttgggcagtgccacgaaacgtcttaaagagagcaacctggtc 41996672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 40147988 - 40147905
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| |||||  |||||||||||||||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacatcttaaagagagcgacctg 40147905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 3666027 - 3665943
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||||||||||| |||  |||||||||| |||||| ||||||||| |  ||||| |||||| ||||| ||||| |||||||||||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttgaagagagcgacct 3665943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 12102831 - 12102915
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||||||||||||| ||||| ||||||| |||||| ||||||||| |  ||||  |||||| | ||| |||||||||||||||||||    
T  12102831 tgttttatcctggtgacggtgtggttgatagtcttccttgcaca-attttggccagtgccacaaaaagtcttaaagagagcgacct 12102915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 31986822 - 31986738
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    |||||||||||| || |||||   |||||| ||||||||||| | |||| |||||||| ||||||| |||||||||| ||||||||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcata-aactcgggtagtgtcgcgaaacgtcttaaagaaagcgacct 31986738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 25 - 216
Target Start/End: Complemental strand, 10106300 - 10106111
Alignment:
Q  25 accgtattgaatagtttaatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgg 124  Q
    |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10106300 accgtattgaatagtttaatcaaacgattaaactatatttgaggtgtatatctacgagcggttgtatattgtgcagtatataatcgtaacagtgatctgg 10106201  T
Q  125 gctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  10106200 gttgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 10106111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 13891016 - 13890821
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  13891016 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtgtattgtgcagtatataatcgtaacagtg 13890917  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  13890916 atctgggctgttttatcctggagacggtgtggttgttagtctaccttg--cacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtc 13890821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 38734478 - 38734283
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  38734478 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttgaggtgtaaatctacgagcgattgtgtactgtgcagtatataatcgtaacagtg 38734379  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  38734378 atctggactgttttatcctggagacggcgtggttgttagtctaccttg--cacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtc 38734283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 26651058 - 26651253
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26651058 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagt 26651157  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||  |||||||||||| |||||||||    
T  26651158 ga-ctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtc 26651253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 5602322 - 5602512
Alignment:
Q  25 accgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatct 122  Q
    ||||||||||||||||| ||||    ||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||    
T  5602322 accgtattgaatagttttaatcaaacgattaaactatattttgaggtgtatatct-cgagcgattgtatactgtgcagtgtataatcgtaatagtgatct 5602420  T
Q  123 gggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    || |||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||| |||||||||||||||| ||||||    
T  5602421 ggactgttttatcttggagacggcgtggttgttagtctaccttg--cacaactagggtagtgcagcgaaacgtcttaaagagagcgatctggtc 5602512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 213
Target Start/End: Complemental strand, 14582297 - 14582110
Alignment:
Q  25 accgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatct 122  Q
    ||||||||||||||||| |||||   |||||  |||||||| ||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||||    
T  14582297 accgtattgaatagttttaatcgaacgattaggctatatttagaggtgtatatct-cgagcgattgtatattgtgcagtgtataatcgtaacagtgatct 14582199  T
Q  123 gggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    || |||||||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||  |||||||||||||||||||    
T  14582198 ggactgttttatcctggagacggtgtggttgttagtctaccttg--cacaactagggtagtgccgcgaaacttcttaaagagagcgacctg 14582110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 19422771 - 19422958
Alignment:
Q  25 accgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatct 122  Q
    ||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||| |||||| |||||||| ||||||| ||||||||||| ||||||||    
T  19422771 accgtattgaatagttttaatcgatcgattaaactatattttgaggtgtatatct-cgagcgattgtataccgtgcagtgtataatcgtaatagtgatct 19422869  T
Q  123 gggctgttttatcctggagacggcgtggttgttagtctaccttgca--cacaacttgggtagtgccgcgaaatgtcttaaagagagcga 209  Q
    ||||| |||||||||||||| ||||| |||||||||||||||  |   ||||||||||||||||| |||||| ||||||||||||||||    
T  19422870 gggctattttatcctggagatggcgtagttgttagtctacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcga 19422958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 39747153 - 39747252
Alignment:
Q  115 agtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctgg 214  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||    
T  39747153 agtgatctgggctgttttatcctggagacgacgtggttgctagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctgg 39747250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 11251105 - 11251200
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  11251105 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 11251200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 37404408 - 37404503
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  37404408 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 37404503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 36684707 - 36684802
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  36684707 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 36684802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 37409529 - 37409624
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  37409529 atctgggctgttttatcctggaaacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 37409624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3584704 - 3584609
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || |||||| |||||||| |||||||||| ||||||||||||    
T  3584704 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtc 3584609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 5725082 - 5724987
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  5725082 atctgtgctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 5724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 27716546 - 27716451
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||||| ||  |||| ||||||||||||||||  |||| ||||||||||||||| |||||||||| ||||||||||||    
T  27716546 atctgggctgttttatcctggagacgacgctgttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 27716451  T

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Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 48246675 - 48246756
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaag 202  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||    
T  48246675 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaag 48246756  T

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Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 34318219 - 34318311
Alignment:
Q  122 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| ||||||||||||||||| |||||    
T  34318219 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacttggtc 34318311  T

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Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 5730208 - 5730113
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||||||  ||||| || |||||| |||||||| |||||||||| ||||||||||||    
T  5730208 atctgtgctgttttatcctggagacggtgcggttgctagtctaccttg--cacaatttaggtagttccgcgaaacgtcttaaagaaagcgacctggtc 5730113  T

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Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 11387841 - 11387917
Alignment:
Q  138 ggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||| ||||| ||||||||||||||||  |||| ||||||||||||||| |||||||| | ||||||||||||    
T  11387841 ggagacggcgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 11387917  T

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Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 10135551 - 10135463
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||| ||| ||||||||||| | |||| ||||||||| |  || ||||||||| ||||| |||||||||||||||||||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcaca-attttaggtagtgccacgaaacgtcttaaagagagcgacctggtc 10135463  T

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Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 23192817 - 23192905
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||  |||||||||| |||||| ||||| ||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 23192905  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 33301180 - 33301268
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||| ||||||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagaacgacctggtc 33301268  T

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Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 40166075 - 40165987
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||| ||| |||||| ||||||||||| ||||||||| |  ||||| |||||| ||||| ||||||||||||||||| |||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacatggtc 40165987  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 27711388 - 27711319
Alignment:
Q  138 ggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcga 209  Q
    |||||||||| ||||| ||||||||||||||||  |||| ||||||||||||||| |||||||||| |||||    
T  27711388 ggagacggcgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcga 27711319  T

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Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 41097914 - 41098039
Alignment:
Q  89 tatactgtgcagtatataatcgtaacag-tgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccg 187  Q
    ||||| ||||||||| |||||| ||||| ||| ||||||||||||||||||||| |  |  |||||||||||||||||||||| |  | |||||||||||    
T  41097914 tatacggtgcagtatttaatcg-aacaggtgaactgggctgttttatcctggaggca-cacggttgttagtctaccttgcaca-atttcgggtagtgccg 41098010  T
Q  188 cgaaatgtcttaaagagagcgacctggtc 216  Q
     ||  ||||||||||| ||||||||||||    
T  41098011 tgatttgtcttaaagaaagcgacctggtc 41098039  T

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Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 19799013 - 19799094
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcga 209  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  |||| ||||||| ||||| ||||||||||||||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttggatagtgccacgaaacgtcttaaagagagcga 19799094  T

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Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 51041463 - 51041549
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| |||||| |||||  ||||| ||||| |||||| ||||| |||||||| ||||||||||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttg--cacaatttgggcagtgccacgaaacgtcttaaa-agagcgacctggtc 51041549  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 215
Target Start/End: Complemental strand, 33055144 - 33055047
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||| ||||||||||||||||||||| | ||  ||||| |||||||||||||||| |||| ||||||||||| ||   |||||||||| |||||| ||||    
T  33055144 gtgaactgggctgttttatcctggaggc-gcacggttgatagtctaccttgcaca-aactcgggtagtgccgtgattagtcttaaagaaagcgacatggt 33055047  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 18784549 - 18784633
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||| |  || || |||||| |||||||||||||| |||||||||||    
T  18784549 tgttttattctggaggcggcgtggttgatagtctgccttgcaca-attttaggcagtgccacgaaatgtcttaaa-agagcgacctg 18784633  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 12260091 - 12260003
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||  |||||||||||||| ||||||  |||||||| |  ||||| |||| | ||||| ||||||||||||||||| |||||    
T  12260091 tgttttatcctaaagacggcgtggttgatagtctgtcttgcaca-attttgggcagtgtcacgaaacgtcttaaagagagcgacatggtc 12260003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 47451225 - 47451313
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| ||||||  |||||||| |  || || ||||||  |||| |||||||||||||||||||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcaca-atttttggcagtgccatgaaacgtcttaaagagagcgacctggtc 47451313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 10140184 - 10140099
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||| |||  |||||||||| | |||| ||||||||| |  ||| |||||||| ||||| || |||||||||||||||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcaca-attttgagtagtgccacgaaacgtgttaaagagagcgacctg 10140099  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 25188272 - 25188357
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||| |||||||| |  |||||||||||||||||||||| ||||   ||||||||||||||  |||| |||| ||| |||||    
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcaca-aactcaagtagtgccgcgaaacttcttcaagaaagcaacctg 25188357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 16035703 - 16035615
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| || |||  |||||||| |  ||||  |||||| ||||| || |||||||| |||||||||||    
T  16035703 tgttttatcctggaggcggcgtggttgataatctgtcttgcaca-actttggacagtgccacgaaacgtgttaaagagggcgacctggtc 16035615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 25855219 - 25855178
Alignment:
Q  175 ttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| |||||| ||||| |||||||||||||||||||||||    
T  25855219 ttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 25855178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 12906251 - 12906166
Alignment:
Q  124 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    |||||||||||||||| | || |||||||| |||||| | ||||||| |  ||||| |||||| ||||| |||||||||||||||||||    
T  12906251 ggctgttttatcctgggg-cgtcgtggttgatagtctgc-ttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 5e-80; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 653246 - 653051
Alignment:
Q  20 tacgcaccgtattgaa-tagtttaatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||| |||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  653246 tacgtaccgtattgaaatagtataatcgaacgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 653147  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  653146 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 10120701 - 10120893
Alignment:
Q  20 tacgcaccgtattgaatagtt-taatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| |||||||||||||||| |||||    ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  10120701 tacgtaccgtattgaatagttctaatctaacgattagactatatttagaggtgtatatct-cgagcgattgtatactgtgcagtgtataatcgtaacagt 10120799  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  10120800 gatctgggctattttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctg 10120893  T

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Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 8082962 - 8083112
Alignment:
Q  62 tttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtcta 161  Q
    ||||||||||||||   |||||| ||  ||| |||||||||  ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  8082962 tttgaggtgtatattctcgagcgattacatattgtgcagtacgtaatcgtaacagtgatctgggctgttttatcttggaggcggcgcggttgttagtcta 8083061  T
Q  162 ccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||  ||||||| |||||||| |||| ||||||||||||||||||||    
T  8083062 ccttgcac-taacttggatagtgccgtgaaacgtcttaaagagagcgacctg 8083112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 8980277 - 8980372
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  8980277 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 8980372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 8985397 - 8985492
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  8985397 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 8985492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 13700613 - 13700518
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  13700613 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 13700518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 21299825 - 21299920
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  21299825 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21299920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 21304945 - 21305040
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  21304945 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtc 21305040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 24490192 - 24490039
Alignment:
Q  62 tttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtcta 161  Q
    ||||||||||||||   |||||  || ||||  ||||||||  ||||||||| |||||| ||||||||||||||||||||  |||| |||||||||||||    
T  24490192 tttgaggtgtatattctcgagcaattatataacgtgcagtacgtaatcgtaatagtgatatgggctgttttatcctggaggtggcgcggttgttagtcta 24490093  T
Q  162 ccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||||  ||||| ||||||| |||||||||||||||| ||||||    
T  24490092 ccttgcaca-aacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtc 24490039  T

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Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 54991589 - 54991494
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  54991589 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 54991494  T

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Target: chr4; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 36354279 - 36354184
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  36354279 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 36354184  T

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Target: chr4; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 36359397 - 36359302
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  36359397 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 36359302  T

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Target: chr4; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 39999172 - 39999077
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  39999172 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 39999077  T

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Target: chr4; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 40004130 - 40004035
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  40004130 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 40004035  T

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Target: chr4; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 41393348 - 41393253
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  41393348 atctgtgctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 41393253  T

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Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 51019365 - 51019460
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  51019365 atctgggatgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 51019460  T

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Target: chr4; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 53797732 - 53797637
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  53797732 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 53797637  T

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Target: chr4; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 54343306 - 54343211
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||  ||||| | |||||||||||||||| |||||||||||||||||||||||    
T  54343306 atctgggctgttttatcctgtagacggcgcggttgctagtctaccttg--cacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 54343211  T

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Target: chr4; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 54348460 - 54348365
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  54348460 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 54348365  T

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Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 13710771 - 13710682
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||    
T  13710771 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgac 13710682  T

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Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 13695262 - 13695167
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||  |||||||| |||||||||||||||  ||||||||| ||||||||||||    
T  13695262 atctaggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacatcttaaagaaagcgacctggtc 13695167  T

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Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 47046299 - 47046394
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| | ||||||||||    
T  47046299 atctgagctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtc 47046394  T

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Target: chr4; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9764013 - 9764108
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||  |||||||| ||||||||| |||||  ||||||||   |||||||||||    
T  9764013 atctgggctgttttatcctagagacggtgcggttgttagtctaccttg--cacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtc 9764108  T

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Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 5271419 - 5271507
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 5271507  T

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Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 12823895 - 12823983
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||| |  |||||||| |  ||||| |||||| |||||||||||||||||||||||||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcaca-attttgggcagtgccacgaaatgtcttaaagagagcgacctggtc 12823983  T

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Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 13521992 - 13522080
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 13522080  T

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Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 16421124 - 16421036
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||| || ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||||||||||| |||||||||||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaatgtcttaatgagagcgacctggtc 16421036  T

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Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 31269129 - 31269041
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  || || |||||| ||||| |||||||||||||||||||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttaggcagtgccacgaaacgtcttaaagagagcgacctggtc 31269041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 31273616 - 31273528
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 31273528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 37259877 - 37259965
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||| |||||||| ||||| |||||||||| ||||||||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgagtagtgccacgaaacgtcttaaagaaagcgacctggtc 37259965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 37264564 - 37264652
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| | |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcata-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 37264652  T

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Target: chr4; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 30564399 - 30564498
Alignment:
Q  112 aacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacc 211  Q
    |||| ||| ||| ||||||||||||| ||| ||||    |||||||||||||||||||| || |||||||||||||||||| |||||| |||||||||||    
T  30564399 aacactgaactgagctgttttatcctcgaggcggcacaattgttagtctaccttgcaca-aatttgggtagtgccgcgaaacgtcttacagagagcgacc 30564497  T

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Target: chr4; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 31765981 - 31765894
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| ||||||||||||| ||||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagtgacctggt 31765894  T

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Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 31729387 - 31729472
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||| ||||||| ||| | |||| ||||||||| |  |||||||||||| ||||| ||||||||||||||||||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcaca-attttgggtagtgccacgaaacgtcttaaagagagcgacctg 31729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 10318779 - 10318867
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||| |||||| ||| ||||| |||||||||||||||||||||| ||||||| ||    ||||||||||||||||||||||||| |||||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcaca-aacttggatacgatcgcgaaatgtcttaaagagagcgacatggtc 10318867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 34644664 - 34644571
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    |||| ||| |||||||||||||| || ||||| |||||||||| |||||| |||| |||| || ||||| ||||||| |||||||||| ||||||    
T  34644664 gtgagctgagctgttttatcctgtaggcggcgcggttgttagtttaccttacaca-aactcggatagtgtcgcgaaacgtcttaaagaaagcgac 34644571  T

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Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 8693806 - 8693718
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||| ||| ||||||||||| |||| |  |||||||| |  |||||||| ||| ||||| |||||||||||||||||||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcaca-attttgggtagcgccacgaaacgtcttaaagagagcgacctggtc 8693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 17359638 - 17359546
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcga 209  Q
    |||| ||||| ||||| |||||||||  ||||  ||||||||||||||||| ||| |||| ||||||||||| |||| |||||||||| |||||    
T  17359638 gtgaactgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaaca-aactcgggtagtgccgggaaacgtcttaaagaaagcga 17359546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 8030476 - 8030561
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||| | |||| |||| ||||||| |||||||| |  ||||| |||||| | ||| ||||||||||||||||||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcaca-attttgggcagtgccacaaaacgtcttaaagagagcgacctg 8030561  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 33463356 - 33463444
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||| |||||  | ||| ||||||||| |  ||||  |||||| ||||| |||||||||||||||||||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcaca-actttggacagtgccacgaaacgtcttaaagagagcgacctggtc 33463444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 39319705 - 39319642
Alignment:
Q  149 ggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    |||||||||||||||||||||| |||| | |||||| || |||| |||||||||| |||||||||    
T  39319705 ggttgttagtctaccttgcaca-aactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctg 39319642  T

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Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 42758756 - 42758843
Alignment:
Q  128 gttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||| |||||| || |||||||| ||||||  |||||||| |  ||||| |||||| |||||  ||||||||||||||||||||||    
T  42758756 gttttattctggaggcgacgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacatcttaaagagagcgacctggtc 42758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 51698012 - 51697969
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcaca 170  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca 51697969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 55251814 - 55251727
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||  |||||||||| ||||||  |||||||| |  ||||  |||||| ||||| |||||||| ||||||||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcaca-attttggacagtgccacgaaacgtcttaaa-agagcgacctggtc 55251727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 33616618 - 33616814
Alignment:
Q  20 tacgcaccgtattgaatag-tttaatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| |||||||||||||| |||||||    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33616618 tacgtaccgtattgaatagatttaatcaaacgattaaactatatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagt 33616717  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  33616718 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33616814  T

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Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 19430217 - 19430022
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19430217 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtg 19430118  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  19430117 atctgggctgttttatcctagagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19430022  T

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Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 19435719 - 19435524
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19435719 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtg 19435620  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  19435619 atctgggctgttttatcctagagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19435524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 19566366 - 19566171
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19566366 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtg 19566267  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  19566266 atctgggctgttttatcctagagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19566171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 19571868 - 19571673
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19571868 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagtg 19571769  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  19571768 atctgggctgttttatcctagagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19571673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 31030732 - 31030536
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| |||||   ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31030732 tacgtaccgtattgaatagtttcaatcgaacgattaaactatatttcgaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagt 31030633  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||| ||||||| |||||||||||||||||||||||    
T  31030632 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtc 31030536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 80 - 216
Target Start/End: Complemental strand, 13584500 - 13584358
Alignment:
Q  80 gagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcaca------caa 173  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||       ||    
T  13584500 gagcgattgtatactgtgcagtatataatcgtaacagtgatctgaactgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaa 13584401  T
Q  174 cttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  13584400 cttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 13584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 42514368 - 42514461
Alignment:
Q  121 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  42514368 ctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 42514461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 21644073 - 21644168
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  21644073 atctgggctgttttatcctggagtcggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21644168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17955781 - 17955876
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||| | ||||||||||||    
T  17955781 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 17955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 32015803 - 32015708
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||| ||||| |||||||||||||||||||||||    
T  32015803 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccacgaaacgtcttaaagagagcgacctggtc 32015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 24884816 - 24884720
Alignment:
Q  119 atctgggctgtttt-atcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||| ||| |||||||||| ||| ||||||||    
T  24884816 atctgggctgtttttatcctggagacggcgtggttgctagtctaccttg--cacaacttaggtagtgccgcaaaacgtcttaaagaaagctacctggtc 24884720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 43999222 - 43999314
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||  ||||| || ||||||||||||||| || ||||||| | |||||||    
T  43999222 atctgggctgttttatcctggagacggcgcagttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgttttaaagaaaacgacctg 43999314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 15875668 - 15875756
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| ||| |||||||||||||||||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcctaaagagagcgacctggtc 15875756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 31449866 - 31449954
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 31449954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 38182237 - 38182325
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| || ||| ||||||||| | |||||| |||||| ||||| || ||||||||||||||||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcaca-atcttgggaagtgccacgaaacgttttaaagagagcgacctggtc 38182325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 44925923 - 44926011
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| || ||||||||||||||||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgttttaaagagagcgacctggtc 44926011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 19166729 - 19166641
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| || |||||| |  ||||| |||||| ||||| ||||||||||||||||| |||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacatggtc 19166641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 40125885 - 40125973
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||| ||||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgatctggtc 40125973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 43302718 - 43302807
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||    ||||  |||||| ||||| |||||||||||| ||||| ||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtc 43302807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 17026030 - 17025942
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| || |||| ||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcaca-atgttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 17025942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 17556522 - 17556434
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| || |||| ||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcaca-atgttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 17556434  T

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Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 18876367 - 18876454
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||| ||||||||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaa-agagcgacctggtc 18876454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 33416642 - 33416554
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||| ||||||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagaccgacctggtc 33416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 36683674 - 36683590
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||||||||||||||| | ||||||||| |||||| |||| |||| |  ||||| |||||| ||||| |||||||||||||||||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacaca-attttgggcagtgccacgaaacgtcttaaagagagcgacct 36683590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 1807565 - 1807483
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||||||||| ||| ||||||||||| |||||| ||||||||| |  ||||| |||| | ||||| |||||||||||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgtcacgaaacgtcttaaagagagcgacct 1807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 32010584 - 32010546
Alignment:
Q  178 ggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32010584 ggtagtgccgcgaaatgtcttaaaaagagcgacctggtc 32010546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 24090722 - 24090634
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| || |||| ||| || ||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcaca-actttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 24090634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 34118561 - 34118473
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||  || || |||||||| |||||| ||||||||| |  ||||| ||||||  |||| |||||||||||||||||||||||    
T  34118561 tgttttatcctaaaggcgacgtggttgatagtctgccttgcaca-attttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 34118473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 1910969 - 1911054
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    |||||||| |||||| | ||||||||| |||||| | ||||||| |  |||  ||||||| ||||| ||||||||||||||||||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcaca-attttgactagtgccacgaaacgtcttaaagagagcgacctg 1911054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 17953873 - 17953961
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| || |||  |||||||| |  ||||| |||||| ||||| |||||||||| |||||| |||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagaaagcgacatggtc 17953961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 28559656 - 28559736
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    |||||||||| |||||||||||||| |||| | ||||||||| |  ||||  |||||| ||||| |||||| ||||||||||    
T  28559656 ttttatcctgcagacggcgtggttgatagtttgccttgcaca-attttggacagtgccacgaaacgtcttatagagagcgac 28559736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 40130733 - 40130774
Alignment:
Q  175 ttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| |||||| ||||| |||||||||||||||||||||||    
T  40130733 ttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 40130774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 13022230 - 13022035
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatatttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtg 118  Q
    |||| ||||||||||||||||| ||||    |||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  13022230 tacgtaccgtattgaatagttttaatcaaacgattaaacaatatttgaggtgtatatctacgagcgattgtgtactgtgcagtatataatcgtaacagtg 13022131  T
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || ||||| ||||||||||||||    
T  13022130 atctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtc 13022035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 53119731 - 53119538
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  53119731 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttcgaggtgcatatctacgagcgattgtatactgtgcagtatataatcgtaacagt 53119632  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||    
T  53119631 gatctggcctgttttatcctagagacggcgtggttgttagtctaccttg--cacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctg 53119538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 33089235 - 33089430
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| |||||   |||||  |||||||| ||||||||||||| |||||| |||||||||||||| | |||||||||||||||    
T  33089235 tacgtaccgtattgaatagttttaatcgaacgattaggctatatttagaggtgtatatct-cgagcgattgtatactgtgcaatgtataatcgtaacagt 33089333  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33089334 gatctgagctgttttatcctagagacggcgtggttgttagtctaccttg--cacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33089430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 20810575 - 20810380
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| |||||||| |||||||| |||||   ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||||| |    
T  20810575 tacgtaccgtattcaatagttttaatcgaacgattagactatatttagaggtgtatatct-cgagcgattgtatactgtgcagtgtataatcgtaacaat 20810477  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||| |||||||||||| ||||||||||    
T  20810476 gatctgagctgttttatcctggagacggcgtggttgttagtctaccttg--cacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtc 20810380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 38436932 - 38437075
Alignment:
Q  68 gtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgc 167  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||      
T  38436932 gtgtatatctacgaccgattgtatactgtgcagtatataatcgtaacaatgatctgggctgttttatcctggagacggcgtggttgttagtctacctt-- 38437029  T
Q  168 acacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
     |||||||||| ||||||| ||||| |||||||||| || ||||||    
T  38437030 tcacaacttggatagtgccacgaaacgtcttaaagaaagtgacctg 38437075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 26962218 - 26962067
Alignment:
Q  62 tttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtcta 161  Q
    |||||||||||||||| |||||| || |||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  26962218 tttgaggtgtatatct-cgagcgattatatattgtgcagtgtataatcgtaacagtgatctgtgctgttttatcctggagacggcgtgtttgttagtcta 26962120  T
Q  162 ccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||  ||||||||| |||||||| ||||| |||||||||||||||| ||||||    
T  26962119 ccttg--cacaacttgtgtagtgccacgaaacgtcttaaagagagcgatctggtc 26962067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17364168 - 17364071
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  17364168 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 17364071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17357941 - 17357844
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||| | ||||||||||    
T  17357941 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaatcgacctggtc 17357844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 3476938 - 3477033
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  3476938 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 3477033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17368822 - 17368727
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  17368822 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 17368727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 54270740 - 54270652
Alignment:
Q  126 ctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||    
T  54270740 ctgttttatcctggagacggcgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaatgtcttaaagaaagcgacctggtc 54270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 4117592 - 4117687
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||  |||||||| ||||||||||||||||||||||| || ||||||||||||    
T  4117592 atctgggctgttttatcctggagacagcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtc 4117687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 20090654 - 20090749
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  20090654 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 20090749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 20095779 - 20095874
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  20095779 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 20095874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 34129161 - 34129256
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  34129161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 34129256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 55128893 - 55128798
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||| ||||||||||||||| |||||||||| | ||||||||||    
T  55128893 atctgggctgttttatcctggagacggcgcggttgctagtctacctt--acacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtc 55128798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 3482415 - 3482510
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || |||| |||||||||| |||||||||| ||||||||||||    
T  3482415 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtc 3482510  T

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Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 15763022 - 15763117
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||  |  ||||||||||||||| |||||||||||||||||||||||    
T  15763022 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 15763117  T

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Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 15768183 - 15768278
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||  |  ||||||||||||||| |||||||||||||||||||||||    
T  15768183 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 15768278  T

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Target: chr3; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 21494287 - 21494390
Alignment:
Q  112 aacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacc 211  Q
    |||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| || || || |  |||||||||||||||||    
T  21494287 aacagtgaactgagctgttttatcccggagacggcgcggttgttagtctaccttgcaca-aacttgggtactgtcgtgatacatcttaaagagagcgacc 21494385  T
Q  212 tggtc 216  Q
    |||||    
T  21494386 tggtc 21494390  T

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Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 27605133 - 27605223
Alignment:
Q  125 gctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||| ||| ||| || ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||||    
T  27605133 gctgttttatcctagaggcggtgtagttgttagtctaccttgcaca-aactcgggtagtgctgcgaaatgtcttaaagagagcgacttggtc 27605223  T

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Target: chr3; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 2617255 - 2617343
Alignment:
Q  126 ctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| |||| | |||||||||||||| |||||||||| |||||| ||||    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcaca-aactcgagtagtgccgcgaaacgtcttaaagaaagcgacatggt 2617343  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 30341836 - 30341931
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||| || | ||||| |||||||||||  |||||| || ||||||||||||||| |||||||||| || |||||||||    
T  30341836 atctgggctgttttatcctggagatggtgcggttgctagtctacctt--acacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtc 30341931  T

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Target: chr3; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 758368 - 758456
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  |||||||||||| ||||| |||||||||||||||| ||||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggtagtgccacgaaacgtcttaaagagagcgatctggtc 758456  T

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Target: chr3; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 23666123 - 23666211
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 23666211  T

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Target: chr3; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 24038371 - 24038459
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 24038459  T

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Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 39775728 - 39775816
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 39775816  T

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Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 3672679 - 3672591
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| ||||||  |||| |||||||||||||||||||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 3672591  T

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Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 3692711 - 3692623
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| ||||||  |||| |||||||||||||||||||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 3692623  T

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Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 14438695 - 14438783
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| | |||| ||||||||| |  |||||||||||| ||||| ||||||||||| |||||||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcaca-attttgggtagtgccacgaaacgtcttaaagagggcgacctggtc 14438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 18467318 - 18467230
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||  |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 18467230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 20520147 - 20520059
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| |||||| ||||||||| | |||||| |||||| ||||| ||||||||||||| |||||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcaca-atcttgggcagtgccacgaaacgtcttaaagagagtgacctggtc 20520059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 8069772 - 8069685
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  ||||||||  | ||||  |||||| ||||| |||||||||||||||||||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca--atttggacagtgccacgaaacgtcttaaagagagcgacctggtc 8069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 7571218 - 7571306
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||| ||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 7571306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 8883263 - 8883175
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| | ||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 8883175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 49971424 - 49971512
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||| ||| |||||| ||||||||| |  |||| ||||||| ||||| |||||||||||| ||||||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcaca-attttggatagtgccacgaaacgtcttaaagagatcgacctggtc 49971512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 10321546 - 10321450
Alignment:
Q  119 atctgggctgtttt-atcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||| || ||||||||  || ||||| ||||||||||||||||  | ||  |||||||||||||| |||||||||| ||||||||||||    
T  10321546 atctgggctgtttttattctggagacaacgcggttgctagtctaccttgcaca--atttaagtagtgccgcgaaacgtcttaaagaaagcgacctggtc 10321450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 26706877 - 26706803
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagag 204  Q
    ||||||||||||| |||||  ||||||||||||||||||||| ||||||| |||||| |||||| |||||| ||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcaca-aacttggatagtgctgcgaaacgtcttagagag 26706803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 32474680 - 32474766
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||  ||||||||||||||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtctt--agagagcgacctggtc 32474766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 1688910 - 1688974
Alignment:
Q  151 ttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||| ||||||||||||| |||| |||||||||||| ||| |||||||||| ||||||||||||    
T  1688910 ttgttaatctaccttgcaca-aactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtc 1688974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 3033737 - 3033649
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||| ||| ||| ||||||| |||||| ||||||||| |  ||||| ||||||  |||| |||||||||||||||||||||||    
T  3033737 tgttttatccttgaggcggtgtggttgatagtctgccttgcaca-attttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 3033649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 3419088 - 3419000
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||| ||  |||||||||| |||||| ||||||||| |  ||||| |||||| ||||| ||||||||||||||||| |||||    
T  3419088 tgttttatcctgaaggtggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacttggtc 3419000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 795394 - 795446
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgca 168  Q
    |||| ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  795394 gtgaactgggctgttttatcctggaggcggcacggttgttagtctaccttgca 795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 10586172 - 10586270
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||| ||||||||||||||||||||| |  |  |||||||||||||||||||||| |  | ||||||||||| ||  ||||||||||| |||||||||||    
T  10586172 gtgaactgggctgttttatcctggaggca-cacggttgttagtctaccttgcaca-atttcgggtagtgccgtgatttgtcttaaagaaagcgacctggt 10586269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 12965873 - 12965960
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| ||||||   ||| ||||||||||||||||||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccataaaacgtcttaaagagagcgacctggt 12965960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 25726841 - 25726881
Alignment:
Q  176 tgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25726841 tgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 25726881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 38436850 - 38436938
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatata 106  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||| |||||||||||||| || || |||||||||||||||| ||||    
T  38436850 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttcgaggtgtatatctatgaccgattgtatactgtgcagtgtata 38436938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 12112641 - 12112725
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||||||||||||||| ||| ||||||| ||||||  |||||||| |  ||||  |||||| ||||| |||||||||||||||||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcaca-actttggacagtgccacgaaacgtcttaaagagagcgacct 12112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 27709029 - 27708988
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgca 168  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgca 27708988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 18472100 - 18472057
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcaca 170  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca 18472057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 23661464 - 23661507
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcaca 170  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||    
T  23661464 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca 23661507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 55431408 - 55431323
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| | |  || |  |||| | ||||| ||||||||||||||||||||    
T  55431408 tgttttatcctggaggcggcgtggttgatagtctgccttgcata-atttttgacagtgtcacgaaacgtcttaaagagagcgacctg 55431323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 29350333 - 29350245
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| |||| |||| | | |||| ||||||||| |  ||||| |||||| ||||| |||||||||| |||||| |||||    
T  29350333 tgttttatcctggaggcggcatggtagatggtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagaaagcgacatggtc 29350245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 6024171 - 6024127
Alignment:
Q  172 aacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||| |||||||| |||| |||||||||    
T  6024171 aacttaggtagtgccgcgaaacgtcttaaaaagagagacctggtc 6024127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 31002770 - 31002707
Alignment:
Q  149 ggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    |||||||||||||||||||||| |  | ||||||||||| ||  ||||||||||| |||||||||    
T  31002770 ggttgttagtctaccttgcaca-atttcgggtagtgccgtgatttgtcttaaagaaagcgacctg 31002707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 133; Significance: 2e-69; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 50 - 216
Target Start/End: Complemental strand, 1738 - 1573
Alignment:
Q  50 gattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgt 148  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738 gattaaactatatttcgaggtgtatatctatgagcgattgtatactgtgaagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgt 1639  T
Q  149 ggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  1638 ggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 1573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 50 - 216
Target Start/End: Complemental strand, 7219 - 7054
Alignment:
Q  50 gattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgt 148  Q
    ||||||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7219 gattaaactatatttcgaggtgtatatctacgaacgattgtatactgtgtagtatataatcgtaacagtgatctgagctgttttatcctggagacggcgt 7120  T
Q  149 ggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  7119 ggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtc 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 24528558 - 24528362
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  24528558 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttcgaggtgtatatctacgagcgattgtatattgtgcagtatataatcgtaacagt 24528459  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  24528458 gatctgagctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtc 24528362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 28292395 - 28292589
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| ||||    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  28292395 tacgtaccgtattgaatagttttaatcaaacgattaaactatatttcgaggtgtatatctacgagtgattgtatactgtgcagtatataatcgtaacagt 28292494  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  28292495 gatctgggctg-tttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccgcgaaacgtcttaaa-agagcgacctggtc 28292589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 33226571 - 33226422
Alignment:
Q  65 gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctacct 164  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  33226571 gaggtgtatatctacgagcgattgtatactgtgcagtatataatcgtaacagtgatctgagctgttttatcctggtgacggcgtggttgttagtctacct 33226472  T
Q  165 tgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||  || ||||| ||||||||||||||| |||||||||||||||||||||||    
T  33226471 tg--cataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33226422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 9973665 - 9973470
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| |||||   ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  9973665 tacgtaccgtattgaatagtttcaatcgaacgattagactatatttagaggtgtatatct-cgagcgattgtatactgtgcagtgtataatcgtaacagt 9973567  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  9973566 gatctgggttgttttatcctggagacggcgtggttgttcgtctaccttg--cacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtc 9973470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 21081031 - 21081128
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  21081031 atctgggctgttttatcctggagacggtgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21081128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 12934500 - 12934405
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||  |||||||||||||||||||||||||| ||||||||||||    
T  12934500 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaactcaggtagtgccgcgaaatgtcttaaagaaagcgacctggtc 12934405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 16539404 - 16539499
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  16539404 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 16539499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 16626258 - 16626163
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  16626258 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 16626163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 42572048 - 42571953
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  42572048 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 42571953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 33238105 - 33238010
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  33238105 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 47999078 - 47998983
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  47999078 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 47998983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 19309603 - 19309697
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||| ||||||||||| |||||||||| |||||||||||    
T  19309603 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtggtgccgcgaaacgtcttaaagacagcgacctggt 19309697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 47993903 - 47993809
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| ||||||||||||||||||||||    
T  47993903 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggt 47993809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 2234622 - 2234717
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||| ||||||||    
T  2234622 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcaacctggtc 2234717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17495506 - 17495411
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||| | ||||||||||||    
T  17495506 atctgggctgttttatcttggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 17495411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17557708 - 17557803
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||| | ||||||||||||    
T  17557708 atctgggctgttttatcttggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 17557803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 32212646 - 32212741
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  32212646 atctgggctgttttatcctggagacagcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 32212741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 33243282 - 33243187
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| ||||||||||||| |||||||||    
T  33243282 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagtgacctggtc 33243187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 47177111 - 47177206
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| |||||||||||||| |||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  47177111 atctgagctgttttatcctgaagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 47177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 43892961 - 43892866
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||||||||||| ||||| |||| |||||||  |||||||| |||||||||| |||| |||||||||| ||||||||||||    
T  43892961 atctgagctgttttatcctggagacggcgcggttgctagtttaccttg--cacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtc 43892866  T

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Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 26341294 - 26341206
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| |||||||||||||||||||||||||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaatgtcttaaagagagcgacctggtc 26341206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 4579603 - 4579515
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 4579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 9650967 - 9651055
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 9651055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 23246933 - 23247021
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| |||||  ||||||||||||||||||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacatcttaaagagagcgacctggtc 23247021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 23866163 - 23866075
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 23866075  T

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Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 3357634 - 3357720
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||| ||||||||||||||||| |||||| ||||||||| |  |||||  || |||||||| |||||||||||||||||||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcaca-actttgggctgtaccgcgaaacgtcttaaagagagcgacctggtc 3357720  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 4930328 - 4930240
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||| |  ||| |||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 4930240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 8076145 - 8076057
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| | ||||||||| ||||||  |||||||| |  || || |||||| ||||| |||||||||||||||||||||||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcaca-attttaggcagtgccacgaaacgtcttaaagagagcgacctggtc 8076057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 13314236 - 13314324
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| || ||||| || |||||||||||||||| |  ||||| ||| || ||||| |||||||||||||||| ||||||    
T  13314236 tgttttatcctggaggcgacgtggctgatagtctaccttgcaca-attttgggcagtaccacgaaacgtcttaaagagagcgatctggtc 13314324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 27256348 - 27256250
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||| ||||||||||||||||||||| |  |  |||||||||||||||||||||| |  | ||||||||||| ||  ||||||||||| |||||||||||    
T  27256348 gtgaactgggctgttttatcctggaggca-cacggttgttagtctaccttgcaca-atttcgggtagtgccgtgatttgtcttaaagaaagcgacctggt 27256251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 42627214 - 42627285
Alignment:
Q  144 ggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||| |||||| | ||||||| |  |||||| ||||| ||||| |||||||||||||||||||||||    
T  42627214 ggcgtggttgatagtctgctttgcaca-attttgggttgtgccacgaaacgtcttaaagagagcgacctggtc 42627285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 22857715 - 22857771
Alignment:
Q  155 tagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||||  |||| | ||||||||||||| |||||||||| |||||||||    
T  22857715 tagtctaccttgcaca--acttagatagtgccgcgaaacgtcttaaagaaagcgacctg 22857771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 10388367 - 10388453
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| |||||| |||| | ||||| | ||  ||||||||||| | |||| | ||| |||||||||||||||||||||||    
T  10388367 tgttttatcctggaggcggcgttgttgat-gtctatcatg--cacaacttgggcaatgccacaaaacgtcttaaagagagcgacctggtc 10388453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 44423137 - 44423218
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcga 209  Q
    ||||||||||||||| |||||| |||| |||||| ||||| ||| |  ||||  |||||| ||||| ||||||||||||||||    
T  44423137 tgttttatcctggaggcggcgtagttgatagtctgccttgaaca-attttggtcagtgccacgaaacgtcttaaagagagcga 44423218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 8268388 - 8268300
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| |||||  |||||||||| ||||||  |||||||| |  ||||  |||||| | ||| |||||||||||||||||||||||    
T  8268388 tgttttatcatggaggtggcgtggttgatagtctgtcttgcaca-attttggacagtgccacaaaacgtcttaaagagagcgacctggtc 8268300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 44510677 - 44510765
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||  |||||| | ||| |||||||||||||| | ||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttggacagtgccacaaaacgtcttaaagagagcaatctggtc 44510765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 19478351 - 19478156
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| |||||   ||| | ||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  19478351 tacgtaccgtattgaatagttttaatcgaacgatcagactatattttgaggtgtatatct-cgagcgattgtatactgtgcagtgtataatcgtaacagt 19478253  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  19478252 gatctgggctgttttatcgtggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19478156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 13604984 - 13605175
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||||||| |||||   ||||| ||||||||| ||||||||||||| |||| | ||||||| |||||||| |||||||||||||||    
T  13604984 tacgtaccgtattgaatagttttaatcgaacgattagactatatttagaggtgtatatct-cgagtgattgtatattgtgcagtgtataatcgtaacagt 13605082  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||    
T  13605083 gatttgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggtagtgccgcgaaacgtcttaaagagagcaacct 13605175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 31495753 - 31495882
Alignment:
Q  39 tttaatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcct 137  Q
    ||||||||||  ||||||| |||||| ||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31495753 tttaatcgttcaattaaaccatattttgaggtgtatatct-cgagcgattatatactgtgcagtatgtaatcgtaacagtgatctgggctgttttatcct 31495851  T
Q  138 ggagacggcgtggttgttagtctaccttgca 168  Q
    ||||||||||||||||||||| ||| |||||    
T  31495852 ggagacggcgtggttgttagtttactttgca 31495882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 31501139 - 31501268
Alignment:
Q  39 tttaatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcct 137  Q
    ||||||||||  ||||||| |||||| ||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31501139 tttaatcgttcaattaaaccatattttgaggtgtatatct-cgagcgattatatactgtgcagtatgtaatcgtaacagtgatctgggctgttttatcct 31501237  T
Q  138 ggagacggcgtggttgttagtctaccttgca 168  Q
    ||||||||||||||||||||| ||| |||||    
T  31501238 ggagacggcgtggttgttagtttactttgca 31501268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 31515643 - 31515772
Alignment:
Q  39 tttaatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcct 137  Q
    ||||||||||  ||||||| |||||| ||||||||||||| |||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  31515643 tttaatcgttcaattaaaccatattttgaggtgtatatct-cgagcgattatatactgtgcagtatgtaatcgtaacagtgatctaggctgttttatcct 31515741  T
Q  138 ggagacggcgtggttgttagtctaccttgca 168  Q
    ||||||||||||||||||||| ||| |||||    
T  31515742 ggagacggcgtggttgttagtttactttgca 31515772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 21396802 - 21396707
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  21396802 atctgggctgttttatcctggagatggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 22698235 - 22698330
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  22698235 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 22698330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 24192472 - 24192567
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||  ||||||||||||||| |||||||||| ||||||||||||    
T  24192472 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 24192567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 29491229 - 29491324
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| |||||| |||||    
T  29491229 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacttggtc 29491324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 34142183 - 34142088
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| ||||| |||||||||| ||||||||||||    
T  34142183 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtc 34142088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 34154799 - 34154704
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| ||||| |||||||||| ||||||||||||    
T  34154799 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtc 34154704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 12182988 - 12183088
Alignment:
Q  115 agtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctgg 214  Q
    |||||| || |||||||||| |||||| || || |||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12182988 agtgatatgagctgttttattctggaggcgacgcggttgttagtctacattgcaca-aacttgggtagtgccgcgaaacgtcttaaagagagcgacctgg 12183086  T
Q  215 tc 216  Q
    ||    
T  12183087 tc 12183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 24191375 - 24191470
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||  |||||||  ||||||||||||||| |||||||||| ||||||||||||    
T  24191375 atctgggctgttttatcctggagacggcgcggttactagtctaccttg--cacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 24191470  T

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Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 31981663 - 31981568
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  31981663 atctggcctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 31981568  T

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Target: chr6; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 22703358 - 22703440
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaaga 203  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  22703358 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaaga 22703440  T

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Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 3902023 - 3901920
Alignment:
Q  112 aacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacc 211  Q
    ||||||||||| | || ||||||||||||| ||||| ||||| || ||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  3902023 aacagtgatctagactattttatcctggaggcggcgcggttggtattctaccttgcaca-aacttggatagtgccgcaaaacgtcttaaagagagcgacc 3901925  T
Q  212 tggtc 216  Q
    |||||    
T  3901924 tggtc 3901920  T

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Target: chr6; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 34376022 - 34375930
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||||||||||||||||| ||||| || ||||| |||  |||||||| ||||||||||||||| |||||||||| |||||||||    
T  34376022 atctgggctgttttatcctggagacggcgcggttgctaatctacgttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctg 34375930  T

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Target: chr6; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 39 - 168
Target Start/End: Original strand, 31475917 - 31476056
Alignment:
Q  39 tttaatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataat----------cgtaacagtgatctgggct 127  Q
    ||||||||||  ||||||| |||||| ||||||||||||| |||||| || ||||||||||||||| ||||          ||||||||||||||| |||    
T  31475917 tttaatcgttcaattaaaccatattttgaggtgtatatct-cgagcgattatatactgtgcagtatgtaattgtatgtaatcgtaacagtgatctgagct 31476015  T
Q  128 gttttatcctggagacggcgtggttgttagtctaccttgca 168  Q
    |||||||||||||||||||||||||||||||  ||||||||    
T  31476016 gttttatcctggagacggcgtggttgttagttgaccttgca 31476056  T

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Target: chr6; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 17281498 - 17281645
Alignment:
Q  62 tttgaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtcta 161  Q
    ||||||||||||||   |||||| ||  ||| ||||||||| ||| | ||||||||||| ||||||||||||||||  || ||  | |||||||||||||    
T  17281498 tttgaggtgtatattctcgagcgattacatattgtgcagtacatagttgtaacagtgatttgggctgttttatcctaaaggcgatgcggttgttagtcta 17281597  T
Q  162 ccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    |||| |||| ||   |||||||||||||||| |||||||||| ||||||    
T  17281598 ccttacaca-aatacgggtagtgccgcgaaacgtcttaaagaaagcgac 17281645  T

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Target: chr6; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 21401844 - 21401763
Alignment:
Q  133 atcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||| ||||||||||| ||||  |||| ||||||||||||||| |||||||||| ||||||||||||    
T  21401844 atcctggagacggcgcggttgctagtctaccttccaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21401763  T

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Target: chr6; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 2818139 - 2818234
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| ||||||||||||||||||||||| ||||  ||||||||||||  |||||||| ||||||  ||| ||| |||||||||| ||||||||||||    
T  2818139 atctgagctgttttatcctggagacggcgcggtttctagtctaccttg--cacaacttaggtagtaacgcaaaacgtcttaaagaaagcgacctggtc 2818234  T

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Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 216
Target Start/End: Original strand, 5600971 - 5601060
Alignment:
Q  126 ctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||| ||||| ||||| |||||||| |||||||| |||| |||| |||||||| ||||||| |||||||||| ||||||||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacaca-aactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtc 5601060  T

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Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 11570749 - 11570836
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||| ||||||||||| | |||| ||||||||| |  ||||| |||||| ||||| ||||||||||||||||||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggt 11570836  T

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Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 10642817 - 10642723
Alignment:
Q  115 agtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    ||||| ||||| |||||||||| |||| ||||| |||||||||||||||||||||| | || || ||||||| ||||| |||||||||| ||||||    
T  10642817 agtgaactgggatgttttatccgggaggcggcgcggttgttagtctaccttgcaca-acctcggatagtgccacgaaacgtcttaaagaaagcgac 10642723  T

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Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 33687603 - 33687690
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||||||||||||||||||| |||||| ||||||  |||||||| |  ||||  |||||| ||||| ||||||||||||||||||||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcaca-attttggccagtgccacgaaacgtcttaaagagagcgacctggt 33687690  T

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Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 29325646 - 29325549
Alignment:
Q  112 aacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    |||||||||||||||| ||||||| ||||| || |   ||||||||||||||||||||| ||||| ||||||| ||  ||| |||||||| ||||||||    
T  29325646 aacagtgatctgggctattttatcttggaggcgtcacagttgttagtctaccttgcaca-aacttaggtagtgtcgtaaaacgtcttaaaaagagcgac 29325549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 12689066 - 12688978
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |  ||||| |||  | | ||| ||||||||||||| |||||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcaca-attttgggcagtatcacaaaacgtcttaaagagagtgacctggtc 12688978  T

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Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 17964559 - 17964634
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaaga 203  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  |||| ||||||| ||||| ||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 24589164 - 24589207
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcaca 170  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcaca 24589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 6407860 - 6407945
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||| ||||||||||| |||||| | ||| ||| |  ||||| |||||| ||||| ||||| ||||||||||||||    
T  6407860 tgttttatcctggaggcggcgtggttgatagtctgctttgtaca-attttgggcagtgccacgaaacgtcttcaagagagcgacctg 6407945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 21309126 - 21309045
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcga 209  Q
    ||||||||||||||| ||||||||||| |||||| | ||||||| |  ||||| ||||||  |||| ||||||||||||||||    
T  21309126 tgttttatcctggaggcggcgtggttgatagtctgcattgcaca-attttgggcagtgccatgaaacgtcttaaagagagcga 21309045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 22713802 - 22713705
Alignment:
Q  115 agtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||| ||| ||| |||||||||| ||  |||| ||||||||||||| |||||||| |||| | ||||||| || ||| ||||||||||||| ||||||    
T  22713802 agtgaactgagctattttatcctgaaggtggcgcggttgttagtctatcttgcaca-aactcgagtagtgctgcaaaacgtcttaaagagagtgacctg 22713705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 16836156 - 16836231
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaaga 203  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||| |  ||||| |||||| ||||| ||||||||||    
T  16836156 tgttttatcctggaggcggcgtggttgatagtctgccttgtaca-attttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 5740792 - 5740874
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacct 212  Q
    ||||||||| | | ||||| ||||| ||||| |||||||||| |||||| |||||| || |||| ||||||||||||| |||||    
T  5740792 ttttatcctagtggcggcgcggttgatagtccaccttgcaca-aacttgagtagtgtcgtgaaacgtcttaaagagagtgacct 5740874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 11614092 - 11614135
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcaca 170  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca 11614135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 8747877 - 8747789
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| |||||| |||| ||| ||  |||||||| |  ||||| |||| | || || |||||||||||||||||||||||    
T  8747877 tgttttatcctggaggcggcgttgttgatagcctgtcttgcaca-attttgggcagtgtcacggaacgtcttaaagagagcgacctggtc 8747789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 11428091 - 11428050
Alignment:
Q  175 ttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||| |||||| ||||| |||||||||||||||||||||||    
T  11428091 ttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 11428050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 13736678 - 13736765
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||| | | ||||||| |||||| ||||||||| |  || || |||||| ||||| ||| ||||||||| ||||||||    
T  13736678 tgttttatcctggaggcagtgtggttggtagtcttccttgcaca-attttaggcagtgccacgaaacgtcgtaaagagagggacctggt 13736765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 3e-59; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 5089481 - 5089286
Alignment:
Q  20 tacgcaccgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagt 117  Q
    |||| ||||||||||||| ||| |||||   ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  5089481 tacgtaccgtattgaatatttttaatcgaacgattagactatatttagaggtgtatatct-cgagcgattgtatactgtgcagtgtataatcgtaacagt 5089383  T
Q  118 gatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  5089382 gatttaggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtc 5089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 25 - 216
Target Start/End: Complemental strand, 42914840 - 42914650
Alignment:
Q  25 accgtattgaatagttt-aatcgtttgattaaactatattt-gaggtgtatatctacgagcggttgtatactgtgcagtatataatcgtaacagtgatct 122  Q
    |||||||| |||||||| |||||   ||||||||||||||  ||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||| |    
T  42914840 accgtattaaatagttttaatcgaacgattaaactatattcagaggtgtatatct-cgagcgattgtatactatgcagtgtataatcgtaacagtgattt 42914742  T
Q  123 gggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  42914741 gggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtc 42914650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 42723443 - 42723538
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  42723443 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 42723538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 42728612 - 42728707
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  42728612 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 42728707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 44096405 - 44096310
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  44096405 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 44096310  T

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Target: chr2; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 44754588 - 44754683
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  44754588 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 44754683  T

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Target: chr2; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 44759754 - 44759849
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  44759754 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 44759849  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 40392419 - 40392340
Alignment:
Q  122 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaaga 203  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  40392419 tgggctgttttatcctggagacggcgtggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaaga 40392340  T

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Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 40518464 - 40518559
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||| | || ||||||||||||||| |||||||||| ||||||||||||    
T  40518464 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 40518559  T

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Target: chr2; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 28751721 - 28751816
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| | ||||| | ||||||||||  |||||||| ||||||||||||||| |||| ||||| ||||||||||||    
T  28751721 atctgggctgttttatcctggagacggtgcggttgcttgtctaccttg--cacaacttaggtagtgccgcgaaacgtctaaaagaaagcgacctggtc 28751816  T

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Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 10160724 - 10160812
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 10160812  T

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Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 30658358 - 30658270
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||| |||||||| ||||| |||||||||||||||||||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgagtagtgccacgaaacgtcttaaagagagcgacctggtc 30658270  T

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Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 1934993 - 1935081
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 1935081  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 9180724 - 9180812
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||  |||||| ||||| |||||||||||||||||||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttggacagtgccacgaaacgtcttaaagagagcgacctggtc 9180812  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 18344526 - 18344438
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||  |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 18344438  T

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Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 19538458 - 19538393
Alignment:
Q  150 gttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||| |||| || |||||||| ||||||||||||||| ||||||||||||    
T  19538458 gttgttagtctaccttgcaca-aactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtc 19538393  T

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Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 9189803 - 9189891
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||  |||||| ||||| |||||||||||||| ||||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttggacagtgccacgaaacgtcttaaagagagcaacctggtc 9189891  T

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Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 25497325 - 25497413
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| || ||||| ||||   ||||| |||||||||||||||||||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcaca-aatttgggcagtgttacgaaacgtcttaaagagagcgacctggtc 25497413  T

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Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 30651024 - 30650936
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||| ||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||| ||||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgatctggtc 30650936  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 11658877 - 11658976
Alignment:
Q  116 gtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||| |||| |||||||||| ||||| ||| |  ||||||||||||||||||||| || | | ||||||||| ||||||||||||||| |||||| ||||    
T  11658877 gtgaactggactgttttatcatggaggcggtgcagttgttagtctaccttgcaca-aattcgagtagtgccgtgaaatgtcttaaagaaagcgacttggt 11658975  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 25478297 - 25478384
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||| |  ||||| |||| | ||||| ||||||||||||||||||||||    
T  25478297 tgttttattctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgtcacgaaacgtcttaaagagagcgacctggt 25478384  T

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Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 12797020 - 12796932
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||| ||||||  |||| ||| |  ||||| |||||| | ||| |||||||||||||||| ||||||    
T  12797020 tgttttatcctggagacggcgtggttgatagtctgtcttgaaca-attttgggcagtgccacaaaacgtcttaaagagagcgatctggtc 12796932  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 29677474 - 29677394
Alignment:
Q  129 ttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    ||||||||||||| ||||||||||| |||||| | ||||||| |  ||||| |||||| ||||| |||||||||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgac 29677394  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 31326834 - 31326746
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||  |||||||||| |||||| ||||||||| |  ||||| |||| |  |||| |||||||||||||||||||||||    
T  31326834 tgttttatcctggaggtggcgtggttgatagtctgccttgcaca-attttgggcagtggcatgaaacgtcttaaagagagcgacctggtc 31326746  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 42926763 - 42926846
Alignment:
Q  131 ttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaa--tgtcttaaagagagcgacctg 213  Q
    ||||||||||| ||||||||||| |||||||||||||||| |  ||||| |||||| |||||  |||||||||||||||| ||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcaca-attttgggcagtgccacgaaacgtgtcttaaagagagcggcctg 42926846  T

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Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 28945266 - 28945191
Alignment:
Q  125 gctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaa 201  Q
    ||||||||||||||||| |  || |||||||||| ||||||||||| |||| | |||||||||||||| ||||||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcaca-aactcgtgtagtgccgcgaaacgtcttaaa 28945191  T

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Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 7737851 - 7737939
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| ||||||  |||||||| |  ||||| |||||| | |||  |||||||||||||||| |||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcaca-attttgggcagtgccacaaaacttcttaaagagagcgacatggtc 7737939  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 28855077 - 28855017
Alignment:
Q  150 gttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacc 211  Q
    ||||||||||||||||| ||| ||||||| |||||||| |||| |||||||||| |||||||    
T  28855077 gttgttagtctaccttgtaca-aacttggatagtgccgtgaaacgtcttaaagaaagcgacc 28855017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 35602017 - 35601929
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| || |||  |||||||| |  ||||  |||||| ||||| |||||||| ||||||||||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcaca-attttggacagtgccacgaaacgtcttaaaaagagcgacctggtc 35601929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 6297848 - 6297973
Alignment:
Q  89 tatactgtgcagtatataatcgtaacag-tgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccg 187  Q
    ||||| ||||||||| |||||| ||||| ||| || || ||||||||||||||| |  |  |||||||||||||||||||||| |  | |||||||||||    
T  6297848 tatacggtgcagtatttaatcg-aacaggtgaactaggatgttttatcctggaggca-cacggttgttagtctaccttgcaca-atttcgggtagtgccg 6297944  T
Q  188 cgaaatgtcttaaagagagcgacctggtc 216  Q
     ||  ||||||||||| ||||||||||||    
T  6297945 tgatttgtcttaaagaaagcgacctggtc 6297973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 39543029 - 39542912
Alignment:
Q  95 gtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtct-accttgcacacaacttgggtagtgccgcgaaat 193  Q
    ||||||||  |||||| |||||| | ||||||| ||||||||||||| |   | |||||||||||| ||||| |||| ||||   ||||||||| ||||     
T  39543029 gtgcagtacgtaatcg-aacagtaaactgggctattttatcctggaggcaatgcggttgttagtcttaccttacaca-aactcatgtagtgccgtgaaac 39542932  T
Q  194 gtcttaaagagagcgacctg 213  Q
    ||||||||||||||||||||    
T  39542931 gtcttaaagagagcgacctg 39542912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 160137 - 160048
Alignment:
Q  126 ctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||  |||| || || ||||| ||| |||||||||||| |  |||||||||| || |||| || ||||||||||||||||||||    
T  160137 ctgttttatctcggaggcgacgcggttgatagcctaccttgcaca-attttgggtagtgtcgtgaaacgtattaaagagagcgacctggtc 160048  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 35638997 - 35639082
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctg 213  Q
    ||||||||||||||| ||||||||||| ||  ||  |||||||| |  ||||| |||||| ||||| |||||||| |||||||||||    
T  35638997 tgttttatcctggaggcggcgtggttgatacgctgtcttgcaca-attttgggcagtgccacgaaacgtcttaaaaagagcgacctg 35639082  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 19578414 - 19578502
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||| ||||||| | || |||||| |||||| ||||||||| |  || ||||||||| | ||| |||||||||||||||| ||||||    
T  19578414 tgttttaccctggaggcagcatggttgatagtcttccttgcaca-attttaggtagtgccacaaaacgtcttaaagagagcgatctggtc 19578502  T

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Target: scaffold0132 (Bit Score: 97; Significance: 8e-48; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 2726 - 2859
Alignment:
Q  81 agcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggt 180  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  2726 agcgattgtatactgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggt 2823  T
Q  181 agtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||| | ||||| ||||||||||| |||||||||||    
T  2824 agtgtcacgaaacgtcttaaagagcgcgacctggtc 2859  T

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Target: scaffold0132; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 10686 - 10819
Alignment:
Q  81 agcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggt 180  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  10686 agcgattgtatactgtgcagtgtataatcgtaacagtggtctgggctgttttatcctggagacggcgtggttgttagtctaccttg--cacaacttgggt 10783  T
Q  181 agtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||| | ||||| ||||||||||| |||||||||||    
T  10784 agtgtcacgaaacgtcttaaagagcgcgacctggtc 10819  T

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Target: scaffold0132; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 2627 - 2685
Alignment:
Q  81 agcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctgg 139  Q
    |||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  2627 agcgattgtatactgtgcagtgtataatcgtcacagtggtctgggctgttttatcctgg 2685  T

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Target: scaffold0132; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 10587 - 10645
Alignment:
Q  81 agcggttgtatactgtgcagtatataatcgtaacagtgatctgggctgttttatcctgg 139  Q
    |||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  10587 agcgattgtatactgtgcagtgtataatcgtcacagtggtctgggctgttttatcctgg 10645  T

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Target: scaffold0166 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 13732 - 13827
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  13732 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 13827  T

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Target: scaffold0166; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 19187 - 19285
Alignment:
Q  119 atctgggctgttttatcctggagacggcgt---ggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    |||||||||||||||||||||||||||||    ||||| ||||||||||||||||  |||| ||||||||||||||| |||||||||| |||||| ||||    
T  19187 atctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcaca--acttaggtagtgccgcgaaacgtcttaaagaaagcgacatggt 19284  T

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Target: scaffold0014 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 31648 - 31553
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  31648 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 31553  T

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Target: scaffold0014; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 26473 - 26387
Alignment:
Q  122 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgac 210  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||    
T  26473 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgac 26387  T

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Target: scaffold0594 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9200 - 9295
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| |||||| |||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  9200 atctgggctgttttatcctggagacggcgcggttgctagtcttccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 9295  T

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Target: scaffold0517 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3666 - 3571
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||  |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  3666 atctgggctgttttatcctggaaacggcgcggttgctagtctaccttg--cacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 3571  T

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Target: scaffold0060 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 37113 - 37018
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||  ||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  37113 atctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 37018  T

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Target: scaffold0055 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3161 - 3066
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  3161 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 3066  T

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Target: scaffold0052 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 81374 - 81469
Alignment:
Q  119 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||  | |  ||||||||||||||| |||||||||||||||||||||||    
T  81374 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca--attcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 81469  T

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Target: scaffold0002 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 4169 - 4081
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| |||||||||||||||||||||||||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaatgtcttaaagagagcgacctggtc 4081  T

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Target: scaffold0352 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 7199 - 7111
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 7111  T

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Target: scaffold0182 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 9887 - 9975
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||| |||||| ||||| |||||||||||||||||||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 9975  T

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Target: scaffold0067 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 33956 - 34056
Alignment:
Q  115 agtgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctgg 214  Q
    |||||||| || |||||||||||| ||  || | |||||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  33956 agtgatctaggttgttttatcctgaaggaggagcggttgttattctaccttgtaca-aactttggtagtgccgcgaaacgtcttaaagagagcgacctgg 34054  T
Q  215 tc 216  Q
    ||    
T  34055 tc 34056  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 83161 - 83073
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| |||| |||||| |||||| ||||||| | |  |||||| ||| | ||||| |||||||||||||||||||||||    
T  83161 tgttttatcctggaggcggcatggttgatagtctgccttgcata-attttgggtggtgtcacgaaacgtcttaaagagagcgacctggtc 83073  T

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Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 1188 - 1313
Alignment:
Q  89 tatactgtgcagtatataatcgtaacag-tgatctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccg 187  Q
    ||||| ||||||||| |||||| ||||| ||| ||||||||||||||| ||||| |  |  |||||||||||||||||||||| |  | |||||||||||    
T  1188 tatacggtgcagtatttaatcg-aacaggtgaactgggctgttttatcttggaggca-cacggttgttagtctaccttgcaca-atttcgggtagtgccg 1284  T
Q  188 cgaaatgtcttaaagagagcgacctggtc 216  Q
     ||  ||||||||||| ||||||||||||    
T  1285 tgatttgtcttaaagaaagcgacctggtc 1313  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 166086 - 166173
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggt 215  Q
    ||||||||||||||| ||||||||||| |||| |  |||||||| |  || || |||||| ||||| ||||||||||||||||||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcaca-atttttggcagtgccacgaaacgtcttaaagagagcgacctggt 166173  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 35729 - 35649
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcg 208  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||| |  ||||  |||| | ||||| |||||||||||||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcaca-attttggccagtgtcacgaaacgtcttaaagagagcg 35649  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 255912 - 255824
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaagagagcgacctggtc 216  Q
    ||||||||||||||| |||| | |||| |||| |  |||||||| |  |||||||||||| |||||  |||||||||||| |||||||||    
T  255912 tgttttatcctggaggcggcatagttgatagtatgtcttgcaca-attttgggtagtgccacgaaacctcttaaagagagtgacctggtc 255824  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 43199 - 43124
Alignment:
Q  127 tgttttatcctggagacggcgtggttgttagtctaccttgcacacaacttgggtagtgccgcgaaatgtcttaaaga 203  Q
    ||||||||||| ||||||||  |||||||| | ||| ||||||| ||||||||||||||  |||||  |||||||||    
T  43199 tgttttatcctagagacggcacggttgttaatttacattgcaca-aacttgggtagtgctacgaaaattcttaaaga 43124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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