View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9864_low_7 (Length: 268)
Name: NF9864_low_7
Description: NF9864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9864_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 5818940 - 5819177
Alignment:
| Q |
14 |
ttaaagcaacaagaaagatgaaataaattcattataatgtgtgtggaccttttgaagtgaaatcattggaag--gtaacttattttgtgtcattcataga |
111 |
Q |
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| T |
5818940 |
ttaaagcaacaagaaagatgaaataaattcattctaatgtgtgtggatattttgaagtgaaatcattgggagaggtaacttattttgtgtcattcataga |
5819039 |
T |
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| Q |
112 |
tgaattcgtcgtaactattgatatatttgatatcaaataaaagtgatgtctttaaagttttcaagaaaattaaatcgttaacgcaaaatgaatctggtga |
211 |
Q |
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| T |
5819040 |
tgaattcatcagaactatggatatatttgatatcaaataaaagtgacgtctttgaagttttcaagaaaattagatcattaacgcaaaatgaatcgggtga |
5819139 |
T |
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| Q |
212 |
agtgattagcagattaagaacatatggtggaggtgaat |
249 |
Q |
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| T |
5819140 |
agtgattagcagattaagaacagatggtggaggtgaat |
5819177 |
T |
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