View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9864_low_9 (Length: 250)
Name: NF9864_low_9
Description: NF9864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9864_low_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 33 - 250
Target Start/End: Complemental strand, 22702266 - 22702055
Alignment:
| Q |
33 |
atcaatgtaccaattacatataaaagggtagctgattcattttgctgttagaatttggtatgataactttgcaaaggaaaatttattaagatgacaatgg |
132 |
Q |
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| T |
22702266 |
atcaatgtaccaatta----taaaagggtagctgattcattttgctgttagaatttggtatgataactatgcaaaggaaaatttattaagatgacaatgg |
22702171 |
T |
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| Q |
133 |
tttgtaatttcctctcttggatgttgttgtcttgctgtgtcttttcttacttttcatggtctcccattcatggtaacaatgtctctttttggtaatccat |
232 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
22702170 |
tttgtaatttcctctcttggatgttgttgtcttgctgtgtcttttcttacttttcatggtctcccattcatggtaacaatgtctc--tttggtaatccat |
22702073 |
T |
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| Q |
233 |
tattagttactgaacatc |
250 |
Q |
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|||||||||||||||||| |
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| T |
22702072 |
tattagttactgaacatc |
22702055 |
T |
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