View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9865_6 (Length: 395)
Name: NF9865_6
Description: NF9865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9865_6 |
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Alignment Details
Target: chr8 (Bit Score: 385; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 393
Target Start/End: Complemental strand, 7065541 - 7065149
Alignment:
| Q |
1 |
gctgacttgaaatcctactagctgcacctgctcataataattgcccaacgtgagtatagctgacagcaccagctactttattgatttcatgagcattcca |
100 |
Q |
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| T |
7065541 |
gctgacttgaaatcctactagctgcacctgctcataataattgcccaacgtgagtatagctgacagcaccagctactttattgatttcatgagcattcca |
7065442 |
T |
|
| Q |
101 |
cacctattagcaacgccaattgaagatccagttttttgtccattactgtatgactaccaatgctggtcccagctccctgctgctacgatgaacttgtgcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7065441 |
cacctattagcaacgccaattgaagatccagttttttgtccattactgtatgactaccaatgctggtcccagctccctgctgctacgatgaacttgtgcc |
7065342 |
T |
|
| Q |
201 |
attcaactcaaaaatgactcattgtcactgatattgcaaaaaattgcagcgataggattcaaatctagactcatttgccaaaatttcctgcaattaatga |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7065341 |
attcaactcaaaaatgactcattgtcactgatattgcaaaaaattgcagtgataggattcaaatctagactcatttgccaaaatttcctgcaattaatga |
7065242 |
T |
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| Q |
301 |
ttacagaatattagattgaaaaccttcactgaatgtaggttgagatagatgactagagaatttcccttacctaacatgtccttaaaagaactc |
393 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
7065241 |
ttacagaatattagattgaaaaccttcactgaatgtaggttgagatagatgactagagaacttcccttacctaacatgtccttaaaagaactc |
7065149 |
T |
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