View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9867_low_10 (Length: 286)
Name: NF9867_low_10
Description: NF9867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9867_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 45089008 - 45089291
Alignment:
| Q |
1 |
aaaccacctgacgcacctactaaaagccgaaaataataaccatgtggcatgcttccccaaatggaagaacataaataatcataaaatacaaagaactttg |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45089008 |
aaaccacctgacgcacctactaaaagccaaaaataataaccatgtggcatgcttccccaaatggaagaacataaataatcataaaatacaaagaactttg |
45089107 |
T |
|
| Q |
101 |
tttcttgaatacataaaatagatatannnnnnnncaactaccaacttatgcacctccttccgcttctaaaaaccatctaaccctcaaaacttcgtgaaat |
200 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45089108 |
tttcttgaatacataaaatagatatattttttttcaactaccaacttatgcacctccttccgcttctaaaaaccatctaaccctcaaaacttcgtgaaat |
45089207 |
T |
|
| Q |
201 |
aatcttcatatcactccctccacaccctaacccacaacaccaaaacacactaacaaacaccctcactctttgaaccctgtccct |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45089208 |
aatcttcatatcactccctccacaccctaacccacaacaccaaaacacactaacaaacaccctcactctttgaaccctgtccct |
45089291 |
T |
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