View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9867_low_13 (Length: 241)
Name: NF9867_low_13
Description: NF9867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9867_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 3 - 225
Target Start/End: Complemental strand, 8931249 - 8931027
Alignment:
| Q |
3 |
ccgtatatgaatccatggatgaaactcattaaaacccatgttagttttacaagcaatatatattactagttactacgattcagattacaataaaaccact |
102 |
Q |
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| T |
8931249 |
ccgtatatgaatccatggatgtaactcattaaaacccatgttagttttacaagcaatatatattactagttactacgattcagattacaataaaaccact |
8931150 |
T |
|
| Q |
103 |
aaaccgtactgcgagggctatcgcctccctcaccctagtcgccccctagctataacaaacggttgggcctaagacacgtccctgcgaggatgggtttaga |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
8931149 |
gaaccgtactgcgagggctatcgcctccctcaccctagtcgccccctagctataacaaacggttgggcctaagacacgtccctgcgaggaagggtttaga |
8931050 |
T |
|
| Q |
203 |
atcttgccatggggtgtacagac |
225 |
Q |
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||||||||||||||||||||||| |
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| T |
8931049 |
atcttgccatggggtgtacagac |
8931027 |
T |
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