View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9867_low_16 (Length: 233)

Name: NF9867_low_16
Description: NF9867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9867_low_16
NF9867_low_16
[»] chr7 (45 HSPs)
chr7 (6-136)||(35961331-35961461)
chr7 (6-131)||(26557730-26557855)
chr7 (1-121)||(48645693-48645813)
chr7 (6-122)||(10345407-10345523)
chr7 (6-121)||(4595777-4595892)
chr7 (6-121)||(4695712-4695827)
chr7 (15-123)||(17731060-17731168)
chr7 (14-138)||(22232387-22232509)
chr7 (14-138)||(22254230-22254352)
chr7 (6-130)||(22611495-22611616)
chr7 (14-130)||(5826477-5826591)
chr7 (14-130)||(11825124-11825238)
chr7 (14-121)||(11397828-11397936)
chr7 (7-110)||(9864522-9864625)
chr7 (14-121)||(8398066-8398171)
chr7 (14-121)||(26153400-26153505)
chr7 (6-138)||(4543028-4543158)
chr7 (14-121)||(8258134-8258239)
chr7 (14-120)||(5796780-5796885)
chr7 (6-131)||(11919622-11919747)
chr7 (6-71)||(4547100-4547165)
chr7 (6-71)||(8277218-8277283)
chr7 (14-131)||(13449550-13449664)
chr7 (14-71)||(2441098-2441155)
chr7 (14-71)||(37415249-37415306)
chr7 (28-138)||(13907561-13907670)
chr7 (14-130)||(23224675-23224788)
chr7 (14-98)||(22257494-22257578)
chr7 (48-138)||(44363589-44363676)
chr7 (48-98)||(23467067-23467117)
chr7 (87-138)||(18560809-18560859)
chr7 (6-83)||(5241977-5242054)
chr7 (14-71)||(6603687-6603744)
chr7 (48-131)||(23776170-23776252)
chr7 (76-131)||(23467013-23467066)
chr7 (7-71)||(44017603-44017667)
chr7 (48-130)||(18559979-18560061)
chr7 (80-121)||(33844388-33844429)
chr7 (103-138)||(37415160-37415195)
chr7 (14-69)||(45286897-45286952)
chr7 (14-69)||(45290308-45290363)
chr7 (59-138)||(22083186-22083268)
chr7 (14-71)||(16165978-16166035)
chr7 (54-121)||(5747422-5747486)
chr7 (102-138)||(13842956-13842992)
[»] chr4 (58 HSPs)
chr4 (6-132)||(12786356-12786482)
chr4 (6-138)||(35510225-35510357)
chr4 (6-138)||(52006277-52006409)
chr4 (6-138)||(19820948-19821079)
chr4 (6-121)||(3720594-3720709)
chr4 (6-121)||(19827655-19827770)
chr4 (6-121)||(3797587-3797703)
chr4 (6-121)||(40795246-40795361)
chr4 (13-121)||(37102981-37103089)
chr4 (6-129)||(5681664-5681783)
chr4 (12-138)||(26060742-26060868)
chr4 (6-131)||(44165026-44165148)
chr4 (6-121)||(24043902-24044017)
chr4 (6-138)||(15445111-15445243)
chr4 (14-130)||(17670548-17670662)
chr4 (14-138)||(56195768-56195892)
chr4 (14-130)||(56199095-56199211)
chr4 (14-121)||(10386180-10386285)
chr4 (14-121)||(18860014-18860119)
chr4 (14-138)||(15404838-15404962)
chr4 (14-124)||(10248062-10248170)
chr4 (22-120)||(15811909-15812008)
chr4 (14-122)||(11702352-11702458)
chr4 (6-131)||(15429609-15429734)
chr4 (6-131)||(15436223-15436348)
chr4 (6-117)||(33408105-33408209)
chr4 (14-121)||(33927214-33927320)
chr4 (1-130)||(5673124-5673250)
chr4 (6-130)||(40902840-40902961)
chr4 (14-131)||(18911748-18911862)
chr4 (6-130)||(48415278-48415403)
chr4 (37-121)||(11649221-11649306)
chr4 (6-130)||(12238493-12238614)
chr4 (6-71)||(38283302-38283367)
chr4 (7-71)||(27014497-27014561)
chr4 (6-136)||(27676806-27676933)
chr4 (1-138)||(5670806-5670936)
chr4 (14-130)||(34319684-34319797)
chr4 (6-121)||(49270924-49271032)
chr4 (7-121)||(53094744-53094862)
chr4 (1-132)||(15432310-15432438)
chr4 (7-138)||(19864151-19864283)
chr4 (1-131)||(34017549-34017676)
chr4 (14-71)||(44808778-44808835)
chr4 (18-71)||(48637753-48637806)
chr4 (48-130)||(37739526-37739607)
chr4 (14-71)||(24150916-24150973)
chr4 (59-121)||(24605007-24605073)
chr4 (14-71)||(29325065-29325122)
chr4 (14-71)||(40616629-40616686)
chr4 (6-59)||(52005589-52005642)
chr4 (7-98)||(5677212-5677303)
chr4 (7-83)||(19859314-19859390)
chr4 (14-71)||(5706636-5706693)
chr4 (14-71)||(52530756-52530813)
chr4 (47-98)||(1388143-1388194)
chr4 (59-138)||(7394614-7394696)
chr4 (48-120)||(48013163-48013235)
[»] chr2 (47 HSPs)
chr2 (1-131)||(25820607-25820737)
chr2 (6-122)||(43723926-43724042)
chr2 (6-131)||(25138691-25138816)
chr2 (6-131)||(26366140-26366265)
chr2 (6-121)||(13971675-13971790)
chr2 (6-130)||(13137114-13137237)
chr2 (6-121)||(6826997-6827112)
chr2 (6-121)||(15470684-15470799)
chr2 (7-121)||(5666745-5666858)
chr2 (14-121)||(31427314-31427422)
chr2 (6-132)||(40781698-40781824)
chr2 (14-131)||(45457386-45457503)
chr2 (14-138)||(1506387-1506508)
chr2 (14-138)||(45454098-45454222)
chr2 (14-121)||(13518538-13518643)
chr2 (14-122)||(1503198-1503304)
chr2 (14-130)||(11060034-11060148)
chr2 (14-130)||(15719043-15719156)
chr2 (14-131)||(36808207-36808324)
chr2 (1-70)||(10601064-10601133)
chr2 (14-130)||(15703739-15703852)
chr2 (6-130)||(31585696-31585819)
chr2 (1-138)||(25870995-25871129)
chr2 (7-138)||(25959449-25959577)
chr2 (14-131)||(11347661-11347775)
chr2 (14-131)||(30274535-30274649)
chr2 (6-130)||(43207651-43207767)
chr2 (14-130)||(8888860-8888973)
chr2 (48-121)||(38460590-38460663)
chr2 (1-77)||(29440706-29440782)
chr2 (6-130)||(42368466-42368588)
chr2 (1-71)||(45499182-45499252)
chr2 (6-66)||(5105934-5105994)
chr2 (7-71)||(9185248-9185312)
chr2 (7-71)||(25874398-25874462)
chr2 (7-71)||(37279500-37279564)
chr2 (67-130)||(13137257-13137319)
chr2 (7-85)||(34682914-34682992)
chr2 (7-71)||(24235317-24235381)
chr2 (7-71)||(24238589-24238653)
chr2 (14-132)||(33310890-33311005)
chr2 (14-71)||(38015742-38015799)
chr2 (14-120)||(3252556-3252658)
chr2 (7-71)||(9188476-9188540)
chr2 (7-71)||(40677583-40677647)
chr2 (82-121)||(30720095-30720134)
chr2 (12-120)||(35521138-35521244)
[»] chr3 (69 HSPs)
chr3 (1-130)||(52200230-52200359)
chr3 (6-138)||(10881809-10881941)
chr3 (6-130)||(10902269-10902393)
chr3 (6-130)||(20728386-20728510)
chr3 (13-130)||(10885191-10885308)
chr3 (6-121)||(52309382-52309497)
chr3 (6-121)||(28007829-28007944)
chr3 (7-131)||(41977331-41977454)
chr3 (6-121)||(16244202-16244317)
chr3 (6-116)||(31549513-31549622)
chr3 (14-130)||(2784355-2784469)
chr3 (1-138)||(16184427-16184562)
chr3 (6-121)||(54461330-54461445)
chr3 (28-135)||(55034667-55034774)
chr3 (14-131)||(23298365-23298480)
chr3 (1-98)||(43809899-43809996)
chr3 (14-138)||(10960136-10960262)
chr3 (14-138)||(10963643-10963769)
chr3 (2-138)||(19304437-19304572)
chr3 (14-130)||(18883461-18883575)
chr3 (6-137)||(49742654-49742784)
chr3 (6-130)||(35412825-35412946)
chr3 (14-98)||(2279415-2279499)
chr3 (14-121)||(42354177-42354282)
chr3 (6-121)||(25585006-25585120)
chr3 (1-131)||(3306086-3306214)
chr3 (14-138)||(24125827-24125949)
chr3 (37-138)||(47051846-47051947)
chr3 (6-138)||(2775814-2775943)
chr3 (6-138)||(2779056-2779185)
chr3 (14-121)||(4250635-4250739)
chr3 (14-98)||(30157827-30157911)
chr3 (14-121)||(54735978-54736083)
chr3 (4-121)||(19301027-19301144)
chr3 (6-71)||(43927169-43927234)
chr3 (14-121)||(25888246-25888351)
chr3 (1-131)||(539141-539268)
chr3 (1-130)||(2873879-2874005)
chr3 (14-84)||(10967152-10967222)
chr3 (14-68)||(24129104-24129158)
chr3 (46-130)||(22993450-22993534)
chr3 (6-71)||(45896710-45896775)
chr3 (6-130)||(3840846-3840969)
chr3 (7-126)||(54724062-54724178)
chr3 (1-71)||(30691050-30691120)
chr3 (6-71)||(6922840-6922905)
chr3 (14-101)||(47055253-47055341)
chr3 (14-130)||(7486899-7487013)
chr3 (1-67)||(12541113-12541179)
chr3 (25-91)||(31857913-31857979)
chr3 (6-67)||(8461307-8461368)
chr3 (14-71)||(28266246-28266303)
chr3 (57-131)||(44509023-44509095)
chr3 (47-121)||(30219759-30219833)
chr3 (14-130)||(6434527-6434643)
chr3 (48-97)||(55031856-55031905)
chr3 (1-132)||(11190841-11190969)
chr3 (7-71)||(28327687-28327751)
chr3 (7-71)||(28331012-28331076)
chr3 (7-121)||(32287075-32287191)
chr3 (6-55)||(10106431-10106480)
chr3 (14-71)||(18641580-18641637)
chr3 (14-71)||(18644576-18644633)
chr3 (38-82)||(281995-282039)
chr3 (28-135)||(50461298-50461402)
chr3 (59-119)||(50096956-50097020)
chr3 (14-69)||(53816157-53816212)
chr3 (45-120)||(18542912-18542986)
chr3 (103-132)||(28266344-28266373)
[»] chr1 (30 HSPs)
chr1 (6-130)||(2405755-2405879)
chr1 (6-134)||(21110909-21111036)
chr1 (6-122)||(49852900-49853016)
chr1 (6-121)||(42022874-42022989)
chr1 (6-121)||(21018230-21018345)
chr1 (6-124)||(45941662-45941779)
chr1 (6-121)||(41058071-41058180)
chr1 (34-121)||(29642994-29643081)
chr1 (6-130)||(6070725-6070846)
chr1 (7-131)||(28111293-28111414)
chr1 (13-71)||(1950269-1950327)
chr1 (14-130)||(23021687-23021800)
chr1 (7-130)||(2794464-2794584)
chr1 (14-130)||(27536298-27536411)
chr1 (14-71)||(49498324-49498381)
chr1 (14-72)||(37183686-37183744)
chr1 (14-71)||(20399097-20399154)
chr1 (14-71)||(45960568-45960625)
chr1 (7-71)||(3796650-3796714)
chr1 (31-130)||(20448093-20448189)
chr1 (31-130)||(20533860-20533956)
chr1 (7-71)||(23441095-23441159)
chr1 (82-121)||(8435439-8435478)
chr1 (14-81)||(34064974-34065040)
chr1 (59-138)||(22456480-22456562)
chr1 (37-71)||(31205104-31205138)
chr1 (14-75)||(50196767-50196829)
chr1 (82-121)||(23990138-23990178)
chr1 (7-83)||(34732171-34732247)
chr1 (62-138)||(49716670-49716743)
[»] chr8 (34 HSPs)
chr8 (1-130)||(5538535-5538663)
chr8 (6-130)||(14421974-14422098)
chr8 (6-138)||(12583252-12583383)
chr8 (6-136)||(23644052-23644180)
chr8 (6-115)||(5980072-5980180)
chr8 (14-130)||(30645721-30645835)
chr8 (14-131)||(14188407-14188522)
chr8 (14-138)||(31981596-31981717)
chr8 (14-121)||(31986523-31986628)
chr8 (38-121)||(33883122-33883206)
chr8 (14-130)||(20262791-20262905)
chr8 (14-130)||(21049421-21049535)
chr8 (6-138)||(22173692-22173820)
chr8 (14-130)||(18695744-18695857)
chr8 (14-98)||(5964492-5964576)
chr8 (14-130)||(14589387-14589501)
chr8 (6-71)||(23597439-23597504)
chr8 (37-121)||(41836210-41836295)
chr8 (6-121)||(43681658-43681762)
chr8 (7-131)||(45155030-45155156)
chr8 (6-121)||(20887776-20887889)
chr8 (14-98)||(4868490-4868575)
chr8 (6-71)||(18721109-18721174)
chr8 (8-120)||(25231316-25231429)
chr8 (14-131)||(10664191-10664304)
chr8 (14-83)||(36710448-36710517)
chr8 (7-70)||(5584256-5584319)
chr8 (14-71)||(18824218-18824275)
chr8 (14-71)||(18825711-18825768)
chr8 (7-71)||(16954008-16954072)
chr8 (7-121)||(37681291-37681408)
chr8 (87-137)||(14349314-14349363)
chr8 (7-131)||(25591244-25591366)
chr8 (82-121)||(13097228-13097267)
[»] chr5 (40 HSPs)
chr5 (1-121)||(21332448-21332568)
chr5 (6-121)||(7271262-7271377)
chr5 (6-121)||(28787093-28787208)
chr5 (7-135)||(21335454-21335581)
chr5 (6-121)||(4099299-4099414)
chr5 (6-121)||(30066555-30066670)
chr5 (6-121)||(33552365-33552480)
chr5 (14-138)||(19686417-19686539)
chr5 (14-138)||(26548327-26548449)
chr5 (14-138)||(28565690-28565812)
chr5 (14-131)||(3195328-3195443)
chr5 (14-131)||(30764472-30764587)
chr5 (14-138)||(30761653-30761775)
chr5 (14-130)||(34652525-34652639)
chr5 (6-130)||(34832008-34832131)
chr5 (14-130)||(26551886-26552000)
chr5 (14-130)||(28562130-28562244)
chr5 (14-121)||(7625345-7625453)
chr5 (19-130)||(19689805-19689914)
chr5 (9-131)||(32838116-32838236)
chr5 (21-138)||(2453536-2453650)
chr5 (6-112)||(39192574-39192680)
chr5 (6-130)||(22936707-22936828)
chr5 (6-131)||(41876520-41876642)
chr5 (1-98)||(10629442-10629539)
chr5 (13-130)||(42063171-42063287)
chr5 (14-71)||(31863958-31864015)
chr5 (6-71)||(43491991-43492056)
chr5 (19-71)||(41306349-41306401)
chr5 (1-121)||(18239276-18239400)
chr5 (1-66)||(40915985-40916050)
chr5 (14-77)||(14015956-14016019)
chr5 (68-121)||(17944923-17944980)
chr5 (14-133)||(37215288-37215399)
chr5 (1-32)||(28441314-28441345)
chr5 (71-121)||(40799728-40799776)
chr5 (49-98)||(18765527-18765577)
chr5 (46-138)||(31575691-31575781)
chr5 (14-71)||(26752524-26752581)
chr5 (48-131)||(21915399-21915481)
[»] scaffold1063 (1 HSPs)
scaffold1063 (6-121)||(2731-2846)
[»] scaffold0015 (1 HSPs)
scaffold0015 (6-130)||(198389-198512)
[»] scaffold0080 (1 HSPs)
scaffold0080 (6-121)||(27355-27470)
[»] chr6 (47 HSPs)
chr6 (6-121)||(17106392-17106507)
chr6 (14-130)||(10290228-10290344)
chr6 (6-116)||(23842568-23842677)
chr6 (14-130)||(34502588-34502702)
chr6 (14-138)||(14966466-14966587)
chr6 (14-123)||(3826595-3826702)
chr6 (48-130)||(20186020-20186102)
chr6 (48-130)||(22149889-22149971)
chr6 (6-116)||(23848017-23848126)
chr6 (14-138)||(23381928-23382050)
chr6 (6-131)||(30655693-30655815)
chr6 (14-121)||(14969946-14970051)
chr6 (1-121)||(23008289-23008409)
chr6 (1-121)||(23779955-23780075)
chr6 (14-121)||(5617984-5618089)
chr6 (7-130)||(9954199-9954319)
chr6 (6-71)||(11188021-11188086)
chr6 (14-121)||(23384526-23384630)
chr6 (40-122)||(24371486-24371567)
chr6 (7-121)||(5260045-5260161)
chr6 (28-121)||(13095497-13095588)
chr6 (6-63)||(11729161-11729218)
chr6 (14-64)||(3596609-3596659)
chr6 (7-121)||(6514232-6514347)
chr6 (14-130)||(1125502-1125615)
chr6 (14-71)||(26942256-26942313)
chr6 (48-130)||(11192348-11192429)
chr6 (14-121)||(11402503-11402608)
chr6 (8-130)||(13005429-13005553)
chr6 (7-121)||(14281289-14281405)
chr6 (7-121)||(28107524-28107640)
chr6 (7-121)||(28111576-28111692)
chr6 (1-66)||(5737890-5737955)
chr6 (59-121)||(9313545-9313611)
chr6 (34-98)||(9839195-9839260)
chr6 (59-121)||(16731622-16731688)
chr6 (7-71)||(2379467-2379531)
chr6 (44-115)||(7559864-7559935)
chr6 (48-135)||(13021013-13021099)
chr6 (87-121)||(2773164-2773198)
chr6 (7-64)||(2372568-2372625)
chr6 (6-79)||(2846540-2846613)
chr6 (82-119)||(11183841-11183878)
chr6 (59-121)||(20527164-20527230)
chr6 (13-98)||(22560954-22561039)
chr6 (59-121)||(28118126-28118192)
chr6 (68-121)||(12983383-12983440)
[»] scaffold0757 (1 HSPs)
scaffold0757 (6-137)||(5596-5726)
[»] scaffold0520 (2 HSPs)
scaffold0520 (6-121)||(1312-1427)
scaffold0520 (6-64)||(8039-8097)
[»] scaffold1755 (1 HSPs)
scaffold1755 (6-138)||(377-508)
[»] scaffold0007 (2 HSPs)
scaffold0007 (6-111)||(248764-248869)
scaffold0007 (1-71)||(92668-92739)
[»] scaffold0045 (1 HSPs)
scaffold0045 (14-121)||(90012-90119)
[»] scaffold0214 (3 HSPs)
scaffold0214 (14-138)||(20303-20425)
scaffold0214 (20-131)||(13859-13968)
scaffold0214 (20-131)||(27875-27984)
[»] scaffold1809 (1 HSPs)
scaffold1809 (6-121)||(309-423)
[»] scaffold0737 (1 HSPs)
scaffold0737 (14-131)||(7107-7223)
[»] scaffold0014 (2 HSPs)
scaffold0014 (14-138)||(223955-224076)
scaffold0014 (14-121)||(228881-228986)
[»] scaffold0360 (2 HSPs)
scaffold0360 (14-121)||(6521-6626)
scaffold0360 (14-121)||(2689-2794)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-138)||(293254-293382)
[»] scaffold0062 (2 HSPs)
scaffold0062 (14-130)||(67600-67713)
scaffold0062 (14-130)||(52651-52764)
[»] scaffold0002 (2 HSPs)
scaffold0002 (14-138)||(118204-118328)
scaffold0002 (34-121)||(99007-99094)
[»] scaffold0996 (1 HSPs)
scaffold0996 (7-122)||(1690-1807)
[»] scaffold0381 (1 HSPs)
scaffold0381 (7-71)||(5222-5286)
[»] scaffold1785 (1 HSPs)
scaffold1785 (13-71)||(153-211)
[»] scaffold1208 (1 HSPs)
scaffold1208 (1-71)||(413-483)
[»] scaffold0035 (1 HSPs)
scaffold0035 (13-71)||(62763-62821)
[»] scaffold2073 (1 HSPs)
scaffold2073 (7-132)||(625-752)
[»] scaffold0034 (1 HSPs)
scaffold0034 (37-130)||(48173-48264)
[»] scaffold0690 (1 HSPs)
scaffold0690 (14-67)||(7538-7591)
[»] scaffold0962 (1 HSPs)
scaffold0962 (6-131)||(3047-3175)
[»] scaffold0427 (1 HSPs)
scaffold0427 (14-129)||(3554-3666)
[»] scaffold0250 (1 HSPs)
scaffold0250 (20-133)||(19645-19755)
[»] scaffold0134 (1 HSPs)
scaffold0134 (59-138)||(7530-7612)
[»] scaffold0412 (1 HSPs)
scaffold0412 (14-71)||(374-431)
[»] scaffold0233 (1 HSPs)
scaffold0233 (38-130)||(10206-10296)
[»] scaffold1657 (1 HSPs)
scaffold1657 (82-122)||(233-273)


Alignment Details
Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 35961331 - 35961461
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35961331 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 35961430  T
Q  106 agtacacttgctaaaatatctatcaagtttt 136  Q
    ||||||||| |||||||||||||||||||||    
T  35961431 agtacactttctaaaatatctatcaagtttt 35961461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 26557730 - 26557855
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  26557730 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatatgaacttattttattacttcgatacgttttt 26557829  T
Q  106 agtacacttgctaaaatatctatcaa 131  Q
    ||||||||||||||||||||||||||    
T  26557830 agtacacttgctaaaatatctatcaa 26557855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 48645693 - 48645813
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  48645693 ggcatcaaaatattttatacatcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatgca 48645792  T
Q  101 tttttagtacacttgctaaaa 121  Q
    |||||||||||||||||||||    
T  48645793 tttttagtacacttgctaaaa 48645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 10345407 - 10345523
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  10345407 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgatacattttt 10345506  T
Q  106 agtacacttgctaaaat 122  Q
    |||||||||||||||||    
T  10345507 agtacacttgctaaaat 10345523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 4595892 - 4595777
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| ||||||||||| |||||||    
T  4595892 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgaatatgaacatattttattacttcgatgcattttt 4595793  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  4595792 agtacacttgctaaaa 4595777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 4695712 - 4695827
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  4695712 caaaataatttatacatcctaaatatttactttattgctaaatttagattaacacagtcctcgtggatacaaacttattttattacttcgatgcattttt 4695811  T
Q  106 agtacacttgctaaaa 121  Q
    | ||||||||||||||    
T  4695812 aatacacttgctaaaa 4695827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 17731060 - 17731168
Alignment:
Q  15 ttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacactt 114  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  17731060 ttatacatcctaaatattcactttattgctaaactgagattaacacagtccttgtggatacgaacttattttattacttcgatgcatttttagtacactt 17731159  T
Q  115 gctaaaata 123  Q
    |||||||||    
T  17731160 gctaaaata 17731168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 22232509 - 22232387
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| || ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  22232509 tttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 22232412  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||    
T  22232411 tgctaaaatatctatcaagtttttg 22232387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 22254230 - 22254352
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| || ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  22254230 tttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 22254327  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||    
T  22254328 tgctaaaatatctatcaagtttttg 22254352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 22611616 - 22611495
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||  ||||||||||||| ||||||||||| |||||||    
T  22611616 caaaataatttatacatcctaaatatttactatattgctaaattgagattaacaaagtcctcgtg--tacgaacttattttattacttcgatgcattttt 22611519  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    ||||||||| |||||| ||||||||    
T  22611518 agtacacttactaaaa-atctatca 22611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 5826591 - 5826477
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||  | ||||||||||||    
T  5826591 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggataagaacttattttattacttcgat--agttttagtacact 5826494  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  5826493 tgctaaaatatctatca 5826477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 11825238 - 11825124
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  11825238 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 11825141  T
Q  114 tgctaaaatatctatca 130  Q
    ||||||||||| |||||    
T  11825140 tgctaaaatatttatca 11825124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 11397936 - 11397828
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  11397936 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacac 11397837  T
Q  113 ttgctaaaa 121  Q
    |||||||||    
T  11397836 ttgctaaaa 11397828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 9864625 - 9864522
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||    
T  9864625 aaaataatttacacatcctaaatatttactttatttctaaattgagattaacacagtcctcatggatacgaacttattttattgcttcgatgcattttta 9864526  T
Q  107 gtac 110  Q
    ||||    
T  9864525 gtac 9864522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 8398066 - 8398171
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  8398066 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 8398163  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  8398164 tgctaaaa 8398171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 26153400 - 26153505
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  26153400 tttacacatcctatatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 26153497  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  26153498 tgctaaaa 26153505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 4543028 - 4543158
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||    
T  4543028 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattt 4543124  T
Q  106 agtacacttgct-aaaatatctatcaagtttttg 138  Q
    |||||||||||| |||| ||||||||||||||||    
T  4543125 agtacacttgctaaaaaaatctatcaagtttttg 4543158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 8258134 - 8258239
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||||  | ||||||||||||    
T  8258134 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtagatacgaacttattttattacttcgat--agttttagtacact 8258231  T
Q  114 tgctaaaa 121  Q
    || |||||    
T  8258232 tgttaaaa 8258239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 5796780 - 5796885
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||| ||||||||||||||||| ||| |||||||||||  | |||||||||||    
T  5796780 tttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttatttttattacttcgat--agttttagtacac 5796877  T
Q  113 ttgctaaa 120  Q
    ||||||||    
T  5796878 ttgctaaa 5796885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 11919747 - 11919622
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacga-acttatttgattacttcgatacatttt 104  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||  || | | || ||| | ||||||||||  | ||    
T  11919747 caaaataatttatacatcctaaatatttactttatttctaaattgagattaatacagtcctcgtgggaactatattttttttactacttcgata-gtatt 11919649  T
Q  105 tagtacacttgctaaaatatctatcaa 131  Q
    ||||| |||||||||||||||||||||    
T  11919648 tagtagacttgctaaaatatctatcaa 11919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 4547100 - 4547165
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  4547100 caaaataatttatacatcctaaatatttactttattgctaaactgagattaacacagtcctcgtgg 4547165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 8277218 - 8277283
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  8277218 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 8277283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 13449664 - 13449550
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||  ||||  |  ||| | ||||||||||  | ||| |||||||    
T  13449664 tttatacatcctaaatatttactttactgctaaattgagattaacatagtcctcgtgggaacga--tatttttactacttcgata-gtatttggtacact 13449568  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||||||||||    
T  13449567 tgctaaaatatctatcaa 13449550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 2441155 - 2441098
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  2441155 tttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtgg 2441098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 37415306 - 37415249
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  37415306 tttatacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgg 37415249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 13907670 - 13907561
Alignment:
Q  28 atatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaatatct 126  Q
    ||||| || ||||||| |||||||||||||||||||||| ||| ||| ||||||| ||| || ||||| |||  ||||||||||||||||| ||||||||    
T  13907670 atattaaccttattgctaaattgagattaacacagtccttgtgcatatgaacttatttttatcacttctata-gtttttagtacacttgct-aaatatct 13907573  T
Q  127 atcaagtttttg 138  Q
    ||||||||||||    
T  13907572 atcaagtttttg 13907561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 23224788 - 23224675
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||   |||  |  ||| | ||||||||||  | |||||||||||    
T  23224788 tttatacatcctaattatttaccttattgctaaattgaaattaacacagtcctcgtgggagcga--tatttttactacttcgata-gtatttagtacact 23224692  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  23224691 tgctaaaatatctatca 23224675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 22257494 - 22257578
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    |||| ||||| || ||||| || ||||||  || |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  22257494 tttacacatcttagatattaaccttattgttaagttgagattaacacagtcctcgtggatacgatcttattttattacttcgata 22257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 44363676 - 44363589
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||| |||| ||||||||||||| || |||||||||||  |||||| |||||||||||||||  | |||||||||||||    
T  44363676 ttgagattaacacagttctcgaggatacgaacttactttattacttcgat--atttttggtacacttgctaaaa-gtttatcaagtttttg 44363589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 23467117 - 23467067
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  23467117 ttgagattaacacagtcctcgtgtatacgaacttattttattacttcgata 23467067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 18560859 - 18560809
Alignment:
Q  87 attacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18560859 attacttcgatag-tttttagtacacttgctaaaatatctatcaagtttttg 18560809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 5242054 - 5241977
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat 83  Q
    ||||||| |||| |||||||| ||| | || ||||||| |||||||||||||||||||||  |||||||| |||||||    
T  5242054 caaaataatttacacatcctagatagtaaccttattgctaaattgagattaacacagtccctgtggatacaaacttat 5241977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 6603687 - 6603744
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  6603687 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 6603744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 23776170 - 23776252
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaatatctatcaa 131  Q
    |||||||||||||||||||||| || ||||||||| ||| |||||||||||  | |||||||| ||||||||||| || ||||||    
T  23776170 ttgagattaacacagtcctcgtagaaacgaacttatttttattacttcgat--agttttagtatacttgctaaaagatttatcaa 23776252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 23467066 - 23467013
Alignment:
Q  76 gaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatcaa 131  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||||||||||||    
T  23467066 gaacttattttattacttcgatag--ttttagtacacttgctaaaatatctatcaa 23467013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 44017667 - 44017603
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| |  ||||||| ||||||| |||||||||||||||||||    
T  44017667 aaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 44017603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 18560061 - 18559979
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||| |||||||||||  ||||||| |||  || |||||||||  ||||||||||| ||||||||||||||||||    
T  18560061 ttgagattaacacggtcctcgtggaatcgaactttattatatgacttcgatag-tttttagtacatttgctaaaatatctatca 18559979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 33844429 - 33844388
Alignment:
Q  80 ttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  33844429 ttattttattacttcgatacatttttagcacacttgctaaaa 33844388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 37415195 - 37415160
Alignment:
Q  103 tttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||| |||||||||||||||||||    
T  37415195 tttagtacacttgctagaatatctatcaagtttttg 37415160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 45286952 - 45286897
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgt 69  Q
    |||| |||||||||||||| || ||||||  ||||||||||||||| |||||||||    
T  45286952 tttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgt 45286897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 45290363 - 45290308
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgt 69  Q
    |||| |||||||||||||| || ||||||  ||||||||||||||| |||||||||    
T  45290363 tttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgt 45290308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 22083268 - 22083186
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||  ||||||||||||||||    || ||| |||||||| | ||||||||||||||||||||  |||||||||||||||    
T  22083268 acagtccctgtggatacgaacttataaattttattgcttcgatataattttagtacacttgctaaaa-gtctatcaagtttttg 22083186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 16165978 - 16166035
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||  |||||||||||||||||||||| ||||    
T  16165978 tttacacatcctagatattaacgttattgataaattgagattaacacagtccttgtgg 16166035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 5747486 - 5747422
Alignment:
Q  54 ttaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||| ||||||||||||||||||||  |||| |||||||| |||  ||||||||||| |||||||||    
T  5747486 ttaacgcagtcctcgtggatacgaac--attttattacttcaata-gtttttagtacatttgctaaaa 5747422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 13842956 - 13842992
Alignment:
Q  102 ttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  13842956 ttttggtacacttgctaaaatatctatctagtttttg 13842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 4e-56; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 12786356 - 12786482
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12786356 caaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 12786455  T
Q  106 agtacacttgctaaaatatctatcaag 132  Q
    |||||||||||||||||||||||||||    
T  12786456 agtacacttgctaaaatatctatcaag 12786482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 35510225 - 35510357
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  35510225 caaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaatttattttattacttggatacattttt 35510324  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||||||||||    
T  35510325 agtacacttgctaaaatatctatcaagtttttg 35510357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 52006409 - 52006277
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  52006409 caaaataatttatatatcctaaatatttactttatcgctaaattgagattaacacagtcctcgtggatacaaacttattttattacttcgattcattttt 52006310  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||||||||||    
T  52006309 agtacacttgctaaaatatctatcaagtttttg 52006277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 19820948 - 19821079
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  19820948 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgatacattttt 19821047  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||||  | |||||||||||||    
T  19821048 agtacacttgctaaaa-gtatatcaagtttttg 19821079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 3720594 - 3720709
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3720594 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 3720693  T
Q  106 agtacacttgctaaaa 121  Q
    |||||| |||||||||    
T  3720694 agtacatttgctaaaa 3720709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 19827655 - 19827770
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  19827655 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaacttattttattacttcgagacattttt 19827754  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  19827755 agtacacttgctaaaa 19827770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 3797703 - 3797587
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttt 104  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  3797703 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttt 3797604  T
Q  105 tagtacacttgctaaaa 121  Q
    |||||||||||||||||    
T  3797603 tagtacacttgctaaaa 3797587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 40795246 - 40795361
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| |||| |||||||||||||||||||    
T  40795246 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcttcgtggatacaaactaattttattacttcgatacattttt 40795345  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  40795346 agtacacttgctaaaa 40795361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 37103089 - 37102981
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacac 112  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||    
T  37103089 ttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattactttgatgcatttttagtacac 37102990  T
Q  113 ttgctaaaa 121  Q
    |||||||||    
T  37102989 ttgctaaaa 37102981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 5681664 - 5681783
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  5681664 caaaataatttatacatcctaaatatttactttattgc----ttgagattaatacagtcctcgtggatacaaacttattttattacttcgatgcattttt 5681759  T
Q  106 agtacacttgctaaaatatctatc 129  Q
    |||||||||||||||| |||||||    
T  5681760 agtacacttgctaaaaaatctatc 5681783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 26060742 - 26060868
Alignment:
Q  12 attttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtac 110  Q
    ||||||||||| ||||||||| || ||||||| || |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  26060742 attttatacattctaaatattaaccttattgctaacttgagattaacatagtcctcgtggatacgaacttatttttattacttcgatacatttttagtac 26060841  T
Q  111 acttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||  |||||||||||||||    
T  26060842 acttgctaaaa-gtctatcaagtttttg 26060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 44165026 - 44165148
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||| ||||||||||||||||| | |||||||||||||  ||||||||    |||||||||||||| |||||||||||||||||||    
T  44165026 caaaataatttatacatcataaatatttactttattactaaattgagattaaatcagtcctca---atacgaacttattttattacttcgatacattttt 44165122  T
Q  106 agtacacttgctaaaatatctatcaa 131  Q
    ||||||||||||||||||||||||||    
T  44165123 agtacacttgctaaaatatctatcaa 44165148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 24044017 - 24043902
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |||| ||||||||| |||||| | ||||||||||    
T  24044017 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtccttatgaatacaaacttattttattactgcaatacattttt 24043918  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||| ||||||    
T  24043917 agtacacttactaaaa 24043902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 15445243 - 15445111
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttt 104  Q
    ||||||| ||| ||||| |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||| | ||||||||||  | ||    
T  15445243 caaaataatttgtacattctaaatatttactttattgctaaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgata-gtatt 15445145  T
Q  105 tagtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||||||||||||| ||||||||    
T  15445144 tagtacacttgctaaaatatctatcgagtttttg 15445111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 17670548 - 17670662
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  17670548 tttacacatcctagatattaactttattgctaagttgagattaacatagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 17670645  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  17670646 tgctaaaatatctatca 17670662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 56195768 - 56195892
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||| |||||||| |||||||||| |||| ||||||||||| ||||||||||||||    
T  56195768 tttacacatcctagatattaacgttattgctaaattgagattaacacaatcctcgtgaatacgaacttaattttattacttcgatgcatttttagtacac 56195867  T
Q  113 ttgctaaaatatctatcaagtttttg 138  Q
    ||||||||| ||||||||||||||||    
T  56195868 ttgctaaaa-atctatcaagtttttg 56195892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 56199095 - 56199211
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  56199095 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacac 56199194  T
Q  113 ttgctaaaatatctatca 130  Q
    ||||||||| ||||||||    
T  56199195 ttgctaaaa-atctatca 56199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 10386180 - 10386285
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  10386180 tttacacatcctaaatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 10386277  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  10386278 tgctaaaa 10386285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 18860014 - 18860119
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  18860014 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--atttttagtacact 18860111  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  18860112 tgctaaaa 18860119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 15404962 - 15404838
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||| |||||||||||||||| |||| ||||||||||| ||| ||||||||||    
T  15404962 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcgtcgtggatacgaacttaattttattacttcgatgcatatttagtacac 15404863  T
Q  113 ttgctaaaatatctatcaagtttttg 138  Q
    |||||||||  |||||||||||||||    
T  15404862 ttgctaaaa-gtctatcaagtttttg 15404838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 10248062 - 10248170
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| |  |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  10248062 tttacacatcctagatattaactttattgctagtttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 10248159  T
Q  114 tgctaaaatat 124  Q
    |||||||||||    
T  10248160 tgctaaaatat 10248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 15812008 - 15811909
Alignment:
Q  22 tcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaa 120  Q
    ||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  15812008 tcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaa 15811909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 11702458 - 11702352
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||  | ||||||||||||    
T  11702458 tttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttattttattacttcgat--agttttagtacact 11702361  T
Q  114 tgctaaaat 122  Q
    |||||||||    
T  11702360 tgctaaaat 11702352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 15429734 - 15429609
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttt 104  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||| ||| | ||||||||||  | ||    
T  15429734 caaaataatttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgata-gtatt 15429636  T
Q  105 tagtacacttgctaaaatatctatcaa 131  Q
    || ||| ||||||||||| ||||||||    
T  15429635 taatacgcttgctaaaatgtctatcaa 15429609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 15436348 - 15436223
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttt 104  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||| ||| | ||||||||||  | ||    
T  15436348 caaaataatttatacatcctaaatatttactttattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgata-gtatt 15436250  T
Q  105 tagtacacttgctaaaatatctatcaa 131  Q
    || ||| ||||||||||| ||||||||    
T  15436249 taatacgcttgctaaaatgtctatcaa 15436223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 33408209 - 33408105
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |       ||||| ||||||||| |||||||||||||||||||    
T  33408209 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaat-------gatacaaacttattttattacttcgatacattttt 33408117  T
Q  106 agtacacttgct 117  Q
    |||||| |||||    
T  33408116 agtacatttgct 33408105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 33927214 - 33927320
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||  | |||||||||||    
T  33927214 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgat--agttttagtacac 33927311  T
Q  113 ttgctaaaa 121  Q
    |||||||||    
T  33927312 ttgctaaaa 33927320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 5673124 - 5673250
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | |||||||||| |    
T  5673124 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-a 5673220  T
Q  101 tttttagtacacttgctaaaatatctatca 130  Q
    | ||||||||||||||||||||||||||||    
T  5673221 tatttagtacacttgctaaaatatctatca 5673250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 40902961 - 40902840
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||    
T  40902961 caaaataatttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattt 40902865  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    ||||||||||||||||||| |||||    
T  40902864 agtacacttgctaaaatatttatca 40902840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 18911748 - 18911862
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||  |  ||| | ||||||||||  | |||||||||||    
T  18911748 tttattcatcctaaatattttttttattgctaaattgagattaacacagtcctcgtggaaacga--tatttttactacttcgata-gtatttagtacact 18911844  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||||||||||    
T  18911845 tgctaaaatatctatcaa 18911862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 48415403 - 48415278
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacga-acttatttgattacttcgatacatttt 104  Q
    ||||||| |||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||   |||| | || ||| ||||||||||||  ||||    
T  48415403 caaaataatttatacatcctaaatatttac-ttatttctaaattgagattaacacagtccttgtgagaacgatattttttttattacttcgatatgtttt 48415305  T
Q  105 tagtacacttgct-aaaatatctatca 130  Q
    ||||||||||||| |||||||||||||    
T  48415304 tagtacacttgctaaaaatatctatca 48415278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 11649306 - 11649221
Alignment:
Q  37 ttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||  ||||||||||    
T  11649306 ttattgctaaattgagattaacacagtcctcatggatacgaacttatttttattatttcgatacatttttagtattcttgctaaaa 11649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 12238493 - 12238614
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||  ||||  |  ||| | |||||||||   | |||    
T  12238493 caaaataatttatacatcctaaatatttactttattgctaaattgagattaatacagtcatcgtgggaacga--tatttttactacttcgat-ggtattt 12238589  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||    
T  12238590 agtacacttgctaaaatatctatca 12238614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 38283367 - 38283302
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  38283367 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 38283302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 27014497 - 27014561
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  27014497 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 27014561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 27676933 - 27676806
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||  |||| |  ||||  |  ||| | |||||||||| || |||    
T  27676933 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagttttcgtaggaacga--tatttttactacttcgata-atattt 27676837  T
Q  106 agtacacttgctaaaatatctatcaagtttt 136  Q
    ||||||||||||| |||||||||||| ||||    
T  27676836 agtacacttgctagaatatctatcaactttt 27676806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 5670806 - 5670936
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | |||||||||| |    
T  5670806 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-a 5670902  T
Q  101 tttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    | |||||||||    |||||||||||||||||||||||    
T  5670903 tatttagtaca----ctaaaatatctatcaagtttttg 5670936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 34319797 - 34319684
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  34319797 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttagtacact 34319701  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  34319700 tgctaaaatatctatca 34319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 49270924 - 49271032
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||| |||||||| |||||||||| ||||||||||||||| |||       ||||| ||||||||| |||||||| ||| ||||||    
T  49270924 caaaataatttatacatcataaatattcactttattgctaaattgagattaacagagt-------gatacaaacttattttattacttcaatatattttt 49271016  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||| ||||||    
T  49271017 agtacacttactaaaa 49271032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 53094744 - 53094862
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat----ttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| ||  |||||| |||||||||||||||||||||  ||||||||||||||||    || ||||||||||| ||||    
T  53094744 aaaataatttacacatcctatatattaaccatattgctaaattgagattaacacagtccctgtggatacgaacttataaagtttattacttcgattcatt 53094843  T
Q  103 tttagtacacttgctaaaa 121  Q
    | || ||||||||||||||    
T  53094844 tataatacacttgctaaaa 53094862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15432310 - 15432438
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| |  ||||||||| |    
T  15432310 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttacaacttcgata-a 15432406  T
Q  101 tttttagtacacttgctaaaatatctatcaag 132  Q
    | ||| ||||||||||||||| ||||||||||    
T  15432407 tattttgtacacttgctaaaaaatctatcaag 15432438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 19864283 - 19864151
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| |||||||||||||||| ||||   || ||||||||||    |||| |||||||||||  | |    
T  19864283 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctctgaatacgaacttataaattttattacttcgat--agt 19864186  T
Q  103 tttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||| ||||| |||||||||||||||    
T  19864185 tttagtacacttgcaaaaat-tctatcaagtttttg 19864151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 34017676 - 34017549
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| ||||||||||||||||||| |||| ||  ||||  |  ||| | ||||||||||      
T  34017676 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtgctcgcgggaacga--tatttttactacttcgata-g 34017580  T
Q  101 tttttagtacacttgctaaaatatctatcaa 131  Q
    | |||| ||||||||||||||||||||||||    
T  34017579 tatttaatacacttgctaaaatatctatcaa 34017549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 44808835 - 44808778
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  44808835 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 44808778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 48637753 - 48637806
Alignment:
Q  18 tacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  48637753 tacatcctaaatatttaccttattgctaaattgggattaacacagtcctcgtgg 48637806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 37739607 - 37739526
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttg-attacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||| ||||||||||| ||||||||| ||| ||||||||||||  |||||| |||||||||| ||||||||||||    
T  37739607 ttgagattaacacggtcctcgtggaaacgaacttaattgtattacttcgata-gtttttaatacacttgct-aaatatctatca 37739526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 24150916 - 24150973
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  24150916 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 24150973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 24605073 - 24605007
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||| ||||||||||||||||    || |||||||||||| ||||||||||||||||||||||    
T  24605073 acagtccttgtggatacgaacttatagattttattacttcgatatatttttagtacacttgctaaaa 24605007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 29325065 - 29325122
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  29325065 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 29325122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 40616686 - 40616629
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||||||||  || ||||||| |||||||||||||||||||||||||||    
T  40616686 tttacacatcctaaatatcaacgttattgctaaattgagattaacacagtcctcgtgg 40616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 52005642 - 52005589
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaaca 59  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  52005642 caaaataatttatacatcttaaatatttactttattgctaaattgaaattaaca 52005589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 5677303 - 5677212
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgata 98  Q
    |||||| ||||| |||| || ||||| || ||||||| ||||||||||| ||||| ||||||||||||||||| || ||| ||||||||||||    
T  5677303 aaaataatttattcatcatagatattaaccttattgctaaattgagatt-acacaatcctcgtggatacgaacatatttttattacttcgata 5677212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 19859390 - 19859314
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat 83  Q
    |||||| |||| |||||||| ||||| || ||||||| |||||||||||||| ||||||   |||||||||||||||    
T  19859390 aaaataatttacacatcctagatattaaccttattgctaaattgagattaactcagtccctttggatacgaacttat 19859314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 5706636 - 5706693
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||| || ||||| || ||||||| |||||||||||||||||||||||||||    
T  5706636 tttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgg 5706693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 52530813 - 52530756
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||| || ||||| || ||||||| |||||||||||||||||||||||||||    
T  52530813 tttacacatcttagatattaacgttattgctaaattgagattaacacagtcctcgtgg 52530756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 1388143 - 1388194
Alignment:
Q  47 attgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    |||||||||||||||||||| || || |||| ||||||| ||||||||||||    
T  1388143 attgagattaacacagtccttgttgaaacgatcttattttattacttcgata 1388194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 7394696 - 7394614
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||  ||||||||||||||||    || |||||||||||| | ||||||||||||||||||||  | |||||||||||||    
T  7394696 acagtccatgtggatacgaacttataaattttattacttcgatatacttttagtacacttgctaaaa-gtttatcaagtttttg 7394614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 48013235 - 48013163
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaa 120  Q
    |||| |||||||| ||||||||||| || ||||| |||  ||||||||||||  ||||||||||||||||||||    
T  48013235 ttgaaattaacacggtcctcgtggaaacaaactttattatattacttcgatag-tttttagtacacttgctaaa 48013163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25820737 - 25820607
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  25820737 ggcataaaaatattttatacatcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatgca 25820638  T
Q  101 tttttagtacacttgctaaaatatctatcaa 131  Q
    |||||||||||||||||||||||||||||||    
T  25820637 tttttagtacacttgctaaaatatctatcaa 25820607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 43723926 - 43724042
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  43723926 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatatattttt 43724025  T
Q  106 agtacacttgctaaaat 122  Q
    |||||||||||||||||    
T  43724026 agtacacttgctaaaat 43724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 25138816 - 25138691
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||||||    
T  25138816 caaaataatttatacatcctaagtatttactttattgctaaattgagattaacacatttctcgtggatacgaacttattttattacttcgatatattttt 25138717  T
Q  106 agtacacttgctaaaatatctatcaa 131  Q
    ||||||||||||||||||||||||||    
T  25138716 agtacacttgctaaaatatctatcaa 25138691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 26366140 - 26366265
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  26366140 caaaataatttatacatcctaaatatttactttattgccgaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcattttt 26366239  T
Q  106 agtacacttgctaaaatatctatcaa 131  Q
    ||||||||| ||||| ||||||||||    
T  26366240 agtacacttactaaagtatctatcaa 26366265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 13971790 - 13971675
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||    
T  13971790 caaaataatttatacatcctaaatattcactttattgctaaattgagattaacaaagtcctcgtggataccaacttattttattacttcgatgcattttt 13971691  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  13971690 agtacacttgctaaaa 13971675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 13137114 - 13137237
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| |||||| |||||||    
T  13137114 caaaataatttatatattctaaatatttactttattgctaaattgagattaagacagtcctcgtggatacgaacttattttattatttcgatgcattttt 13137213  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||| ||||||||    
T  13137214 agtacacttgctaaaa-atctatca 13137237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 6826997 - 6827112
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| ||| || ||||    
T  6826997 caaaataatttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatatgaacttattttattactttgatgcaatttt 6827096  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  6827097 agtacacttgctaaaa 6827112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15470684 - 15470799
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||| |||||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15470684 caaaataatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 15470783  T
Q  106 agtacacttgctaaaa 121  Q
    ||||| ||||||||||    
T  15470784 agtacccttgctaaaa 15470799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 5666745 - 5666858
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||| ||| |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  5666745 aaaataatttatacatcctaaatatt-actttattgctaaattgagatcaacgcagtcctcgtagatacgaacttattttattacttcgatatattttta 5666843  T
Q  107 gtacacttgctaaaa 121  Q
     ||||||||||||||    
T  5666844 atacacttgctaaaa 5666858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 31427422 - 31427314
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  31427422 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcttcgtggatacgaacttaattttattacttcgatgcatttttagtacac 31427323  T
Q  113 ttgctaaaa 121  Q
    |||||||||    
T  31427322 ttgctaaaa 31427314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 40781698 - 40781824
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||  || ||| ||||||||||||| |||||    
T  40781698 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacgttttt 40781796  T
Q  106 agtacacttgct-aaaatatctatcaag 132  Q
    |||||||||||| |||||||||||||||    
T  40781797 agtacacttgctaaaaatatctatcaag 40781824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 45457386 - 45457503
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||    
T  45457386 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatatttagtacac 45457485  T
Q  113 ttgctaaaatatctatcaa 131  Q
    ||||||||| |||||||||    
T  45457486 ttgctaaaa-atctatcaa 45457503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 1506508 - 1506387
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||    
T  1506508 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttattttattacttcgat--agttttagtacact 1506411  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    ||||||||| | |||||||||||||    
T  1506410 tgctaaaat-tttatcaagtttttg 1506387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 45454098 - 45454222
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| ||||||||||    
T  45454098 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaacttaattttattacttcgatgcatatttagtacac 45454197  T
Q  113 ttgctaaaatatctatcaagtttttg 138  Q
    |||||||||  |||||||||||||||    
T  45454198 ttgctaaaa-gtctatcaagtttttg 45454222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 13518538 - 13518643
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  13518538 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 13518635  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  13518636 tgctaaaa 13518643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 1503304 - 1503198
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||    
T  1503304 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttattttattacttcgat--agttttagtacact 1503207  T
Q  114 tgctaaaat 122  Q
    |||||||||    
T  1503206 tgctaaaat 1503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 11060034 - 11060148
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||||  | |||||||||| |    
T  11060034 tttacacatcctagatattaactttattgctaagttgagattaacacagttctcgtggatacgaacttattttattacttcgat--agttttagtacatt 11060131  T
Q  114 tgctaaaatatctatca 130  Q
    ||||||||||| |||||    
T  11060132 tgctaaaatatttatca 11060148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 15719156 - 15719043
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||| ||  | ||||||||||||    
T  15719156 tttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaacttattttattacttccat--agttttagtacact 15719059  T
Q  114 tgctaaaatatctatca 130  Q
    || ||||| ||||||||    
T  15719058 tggtaaaa-atctatca 15719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 36808324 - 36808207
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| | ||| | |||||    
T  36808324 tttacacatcctagatattaaccttattgctaaattgagattaatacagtcctcgtggatacgaacttaattttattacttcgatatagtttaaatacac 36808225  T
Q  113 ttgctaaaatatctatcaa 131  Q
    ||||||||| |||||||||    
T  36808224 ttgctaaaa-atctatcaa 36808207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10601064 - 10601133
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtg 70  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  10601064 ggcatcaaaatattttatacatcttaaatatttactttattgctaaattgaaattaacacagtcctcgtg 10601133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 15703852 - 15703739
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||| ||||||| ||||||||||||||||||||||||| |||||||||||  | ||||||| ||||    
T  15703852 tttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaacttattttattacttcgat--agttttagtgcact 15703755  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||| ||||||||    
T  15703754 tgctaaaa-atctatca 15703739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 31585819 - 31585696
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta--tttgattacttcgatacattt 103  Q
    ||||||| ||||||||||||| |||||||||||||| | ||||||||||||||||||| || ||||    |||| ||  ||| ||||||||||||| |||    
T  31585819 caaaataatttatacatcctagatatttactttatttctaaattgagattaacacagttcttgtgg----gaacatattttttattacttcgatacgttt 31585724  T
Q  104 ttagtacacttgct-aaaatatctatca 130  Q
    |||||||||||||| |||||||||||||    
T  31585723 ttagtacacttgctaaaaatatctatca 31585696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25870995 - 25871129
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| ||||||||||||||||||||||||| |  ||||  |  ||| | ||||||||||      
T  25870995 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtaggaacga--tatttttactacttcgata-g 25871091  T
Q  101 tttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    | |||||||||||||||||| |||||||||||||||||    
T  25871092 tatttagtacacttgctaaattatctatcaagtttttg 25871129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 25959577 - 25959449
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| ||||||||||| || || ||||||| |||||||||||||||||||| ||||||  ||||  |  ||| | ||||||||||  | ||||    
T  25959577 aaaataatttacacatcctaaatgttaaccttattgctaaattgagattaacacagtcatcgtgggaacga--tatttttactacttcgata-gtattta 25959481  T
Q  107 gtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||||||||||||||||||||    
T  25959480 gtacacttgctaaaatatctatcaagtttttg 25959449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 11347775 - 11347661
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||| ||||  | |||||||||||    
T  11347775 tttatacatcctaattatttaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactactttgata-gtatttagtacact 11347679  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||||||||||    
T  11347678 tgctaaaatatctatcaa 11347661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 30274649 - 30274535
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| |||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  30274649 tttatacatcctatatatttacgttattgctaaattgagattaacacagtcctcatgggaacga--tatttttactacttcgata-gtatttagtacact 30274553  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||||||||||    
T  30274552 tgctaaaatatctatcaa 30274535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 43207767 - 43207651
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||       || ||||  ||||  || ||| ||||||||||||| |||||    
T  43207767 caaaataatttatacatcctaaatatttactttatttctaaattgagattaa-------cttgtgggaacgatatt-ttttattacttcgatacgttttt 43207676  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||    
T  43207675 agtacacttgctaaaatatctatca 43207651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 8888860 - 8888973
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  8888860 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttagtacact 8888956  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  8888957 tgctaaaatatctatca 8888973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 38460663 - 38460590
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||||||||||||||||| ||||| ||||||||| | |||||||||  ||||||||||||||||||||||    
T  38460663 ttgagattaacacagtcctcgtagatacaaacttattttactacttcgatgtatttttagtacacttgctaaaa 38460590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29440706 - 29440782
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacga 77  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||| ||||    
T  29440706 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtggaaacga 29440782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 42368588 - 42368466
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||  | ||||  ||||  |  ||| ||||||||||||  | |||    
T  42368588 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtttttgtgggaacga--tatttttattacttcgata-gtattt 42368492  T
Q  106 agtacacttgct-aaaatatctatca 130  Q
    |||||||||||| |||||||||||||    
T  42368491 agtacacttgctaaaaatatctatca 42368466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45499252 - 45499182
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  45499252 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 45499182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 5105934 - 5105994
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcct 66  Q
    ||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  5105934 caaaataatttatacatcctgaatatttactttatttctaaattgagattaacacagtcct 5105994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 9185312 - 9185248
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  9185312 aaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgg 9185248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 25874398 - 25874462
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  25874398 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 25874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37279564 - 37279500
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  37279564 aaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcctcgtgg 37279500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 13137257 - 13137319
Alignment:
Q  67 cgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||    
T  13137257 cgtggatacgaacttattttattatttcgatgcatttttagtacacttgctaaaa-atctatca 13137319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 34682914 - 34682992
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttattt 85  Q
    |||||| ||||| ||||||| ||||| ||  |||||| |||||||||||| || |||||||||||||||||||||||||    
T  34682914 aaaataatttattcatcctagatattaacactattgctaaattgagattaccatagtcctcgtggatacgaacttattt 34682992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 24235317 - 24235381
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| ||||||||| |||| || ||||||| |||||||||||||||||||||||||||    
T  24235317 aaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgg 24235381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 24238589 - 24238653
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| ||||||||| |||| || ||||||| |||||||||||||||||||||||||||    
T  24238589 aaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcctcgtgg 24238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 33310890 - 33311005
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | ||| |||||||    
T  33310890 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttggtacact 33310986  T
Q  114 tgctaaaatatctatcaag 132  Q
    ||| |||||||||||||||    
T  33310987 tgccaaaatatctatcaag 33311005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 38015742 - 38015799
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  38015742 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 38015799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 3252556 - 3252658
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| |  |||||||||||||||| |||||||| || ||    ||| ||||||||||||  |||||||||||||    
T  3252556 tttacacatcctagatattaactttattgctatgttgagattaacacagttctcgtggaaacaaa---tttttattacttcgata-gtttttagtacact 3252651  T
Q  114 tgctaaa 120  Q
    |||||||    
T  3252652 tgctaaa 3252658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 9188540 - 9188476
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| || |||||||  |||||||||||||||||| |||||||    
T  9188540 aaaataatttacacatcctaaatattaaccttattgctgaattgagattaacacagtactcgtgg 9188476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 40677647 - 40677583
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| |  ||||||| ||||||| |||||||||||||||||||    
T  40677647 aaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 40677583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 30720095 - 30720134
Alignment:
Q  82 atttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  30720095 attttattacttcgatatatttttagtacacttgctaaaa 30720134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 35521244 - 35521138
Alignment:
Q  12 attttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat-ttgattacttcgatacatttttagtac 110  Q
    ||||||||||||| | ||| | ||  |||||| ||||||| |||||| |||| ||||| |||||||| |||| || |||||||||||| |   |||||||    
T  35521244 attttatacatccgagataataacaatattgctaaattgatattaacgcagttctcgtagatacgaatttatatttattacttcgataaa---ttagtac 35521148  T
Q  111 acttgctaaa 120  Q
    ||||||||||    
T  35521147 acttgctaaa 35521138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 52200230 - 52200359
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52200230 ggcatcaaaatattttatacatccttaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgataca 52200329  T
Q  101 tttttagtacacttgctaaaatatctatca 130  Q
    |||||| |||||||||||||||||||||||    
T  52200330 tttttaatacacttgctaaaatatctatca 52200359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 10881809 - 10881941
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10881809 caaaataatttatatatcctaaatatttactttattgctaaattgatattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 10881908  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||| ||||||||  |||||||||||||||    
T  10881909 agtacacatgctaaaaattctatcaagtttttg 10881941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 10902269 - 10902393
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  10902269 caaaataatttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttagatacattttt 10902368  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||| | ||||||    
T  10902369 agtacacttgctaaaaaagctatca 10902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 20728510 - 20728386
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  20728510 caaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcatggatacgaacttattttattacttcgattcattttt 20728411  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||| ||||||||||||||    
T  20728410 agtacacttgttaaaatatctatca 20728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 10885191 - 10885308
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacac 112  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||    
T  10885191 ttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtggatacaaacttattttattactttgatgcatttttagtacac 10885290  T
Q  113 ttgctaaaatatctatca 130  Q
    ||||||||||||||||||    
T  10885291 ttgctaaaatatctatca 10885308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 52309497 - 52309382
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  52309497 caaaataatttatacatcctaaatatttactttattgctaaattgaaattaacattgtcctcgtggatacgaacttattttattacttcgatacattttt 52309398  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  52309397 agtacacttgctaaaa 52309382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 28007944 - 28007829
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||||| ||| |||    
T  28007944 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacatagtcctcgtggatacgaacttattttatcacttcgatgcatattt 28007845  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  28007844 agtacacttgctaaaa 28007829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 41977331 - 41977454
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  41977331 aaaataatttatatatcctaaatatttattttattgctaaattaagattaacacagtcctcgtagatacaaacttattttattacttcgatacattttta 41977430  T
Q  107 gtacacttgctaaaatatctatcaa 131  Q
     |||||||||||||| |||||||||    
T  41977431 atacacttgctaaaa-atctatcaa 41977454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 16244202 - 16244317
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| |||| ||||||||| |||||||||||  ||||||    
T  16244202 caaaataatttatacatcctaaatatttactttattactaaattgagattaacacggtcctcgtgtatacaaacttattttattacttcgatgtattttt 16244301  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  16244302 agtacacttgctaaaa 16244317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 31549513 - 31549622
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |||||    
T  31549513 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcatcgtggatacgaacttattttattacttcgata-gttttt 31549611  T
Q  106 agtacacttgc 116  Q
     ||||||||||    
T  31549612 ggtacacttgc 31549622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 2784355 - 2784469
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||| | |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  2784355 tttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 2784452  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  2784453 tgctaaaatatctatca 2784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 16184562 - 16184427
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||  |  ||| | ||||||||||      
T  16184562 ggcatcaaaatattttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggaaacga--tatttttactacttcgata-g 16184466  T
Q  101 tttttagtacacttgct-aaaatatctatcaagtttttg 138  Q
    | ||||||||||||||| |||| ||||||||||||||||    
T  16184465 tatttagtacacttgctaaaaaaatctatcaagtttttg 16184427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 54461330 - 54461445
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||| || |||| ||||||||||||||| ||||||||||| ||| |||    
T  54461330 caaaataatttttacatcctaaatatttactttattgctaaattgagattaatacattcttcgtagatacgaacttattttattacttcgatgcatgttt 54461429  T
Q  106 agtacacttgctaaaa 121  Q
    | ||||||||||||||    
T  54461430 aatacacttgctaaaa 54461445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 55034774 - 55034667
Alignment:
Q  28 atatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatcta 127  Q
    |||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  55034774 atatttactttattgctaaattgaaattaacatagttcttgtggatacgaacttattttattacttcgatgcatttttagtacacttgctaaaatatcca 55034675  T
Q  128 tcaagttt 135  Q
     |||||||    
T  55034674 acaagttt 55034667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 23298480 - 23298365
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | |||||||||||||||||||||||||    
T  23298480 tttacacatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgatacatttttagtacact 23298383  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||||||||||    
T  23298382 tgctaaaatatctatcaa 23298365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 43809899 - 43809996
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||| |||||||||||||| | ||||||||||    
T  43809899 ggcatcaaaatattttatacatcctaaatatttactttattgctaaattaaaattaacacagtccccgtgaatacgaacttattttactacttcgata 43809996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 10960136 - 10960262
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta----tttgattacttcgatacatttttagta 109  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||    ||| |||||||||||  | ||||||||    
T  10960136 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattatttttattacttcgat--agttttagta 10960233  T
Q  110 cacttgctaaaatatctatcaagtttttg 138  Q
    | |||||||||||||||||||||||||||    
T  10960234 cgcttgctaaaatatctatcaagtttttg 10960262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 10963643 - 10963769
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta----tttgattacttcgatacatttttagta 109  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||    ||| |||||||||||  | ||||||||    
T  10963643 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattatttttattacttcgat--agttttagta 10963740  T
Q  110 cacttgctaaaatatctatcaagtttttg 138  Q
    | |||||||||||||||||||||||||||    
T  10963741 cgcttgctaaaatatctatcaagtttttg 10963769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 19304572 - 19304437
Alignment:
Q  2 gcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacat 101  Q
    ||||||||||| |||| ||||||| |||||| ||  ||||||  |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| ||     
T  19304572 gcatcaaaataatttacacatcctcaatattaaccatattgctgaattaagattaacagagtcctcgtggatacaaacttattttattacttcgatgcaa 19304473  T
Q  102 ttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||||||||  |||||||||||||||    
T  19304472 ttttagtacacttgctaaaa-gtctatcaagtttttg 19304437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 18883461 - 18883575
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||| | ||||| |||  | ||||||||||||    
T  18883461 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgaatacgaacttattttactactttgat--agttttagtacact 18883558  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  18883559 tgctaaaatatctatca 18883575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 49742784 - 49742654
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||    ||||  || ||| ||||||||||||| |||||    
T  49742784 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtaagaacgatatt-ttttattacttcgatacgttttt 49742686  T
Q  106 agtacacttgctaaaatatctatcaagttttt 137  Q
    ||||||||||||||||  |||||||| |||||    
T  49742685 agtacacttgctaaaaattctatcaaattttt 49742654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 35412825 - 35412946
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||    
T  35412825 caaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattt 35412921  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||    
T  35412922 agtacacttgctaaaatatctatca 35412946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 2279499 - 2279415
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2279499 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgata 2279415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 42354282 - 42354177
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||  || |||||||| ||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  42354282 tttacacatcctagatattaactttattgttaagttgagattgacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 42354185  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  42354184 tgctaaaa 42354177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 25585006 - 25585120
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | || || |||||||||||||||| ||||  ||||  || ||| ||||||||||||| |||||    
T  25585006 caaaataatttatacatcctaaatatttactttatttctaagttaagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacgttttt 25585104  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  25585105 agtacacttgctaaaa 25585120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3306086 - 3306214
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||| ||||| |||||||||| |  ||||||||||||||||||||||||||||||||||| || ||||||||||||      
T  3306086 ggcattaaaataatttacacatcctagatattaactttattgctaggttgagattaacacagtcctcgtggatacgaacttaatttattacttcgata-g 3306184  T
Q  101 tttttagtacacttgctaaaatatctatcaa 131  Q
    || || ||||||||||  |||||||||||||    
T  3306185 ttattggtacacttgc-caaatatctatcaa 3306214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 24125827 - 24125949
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  24125827 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttagtacact 24125923  T
Q  114 tgct-aaaatatctatcaagtttttg 138  Q
    |||| |||| ||||||||||||||||    
T  24125924 tgctaaaaaaatctatcaagtttttg 24125949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 138
Target Start/End: Original strand, 47051846 - 47051947
Alignment:
Q  37 ttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaaatatctatcaagttt 135  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||  |||  ||||||||||||    
T  47051846 ttattgctaaattgagattaacatagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgc-caaacctctatcaagttt 47051944  T
Q  136 ttg 138  Q
    |||    
T  47051945 ttg 47051947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 2775814 - 2775943
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||  |  ||| ||||||||||||  | |||    
T  2775814 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgata-gtattt 2775910  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||  ||| ||||||||||||||||    
T  2775911 agtacacttgcacaaaaatctatcaagtttttg 2775943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 2779056 - 2779185
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||  |  ||| ||||||||||||  | |||    
T  2779056 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgata-gtattt 2779152  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||  ||| ||||||||||||||||    
T  2779153 agtacacttgcacaaaaatctatcaagtttttg 2779185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 4250635 - 4250739
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||| |||||| |||||| |||||||||||  | ||||||||||||    
T  4250635 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgg-tacgaatttattttattacttcgat--agttttagtacact 4250731  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  4250732 tgctaaaa 4250739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 30157911 - 30157827
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  30157911 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttaatttattacttcgata 30157827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 54736083 - 54735978
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||| || ||||||||  | ||||| ||||||    
T  54736083 tttacacatcctagatattaactttattgctaagttgagattaacacaatcctcgtggatacgaacttattttataacttcgat--aattttaatacact 54735986  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  54735985 tgctaaaa 54735978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 19301144 - 19301027
Alignment:
Q  4 atcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattt 103  Q
    ||||||||| |||| ||||||| |||||| ||  |||||   |||||||||||||||| | ||| ||||||||||||||||| ||||||||||| |||||    
T  19301144 atcaaaataatttacacatcctgaatattaaccatattgttgaattgagattaacacaatgctcatggatacgaacttattttattacttcgatgcattt 19301045  T
Q  104 ttagtacacttgctaaaa 121  Q
    | ||||||||| ||||||    
T  19301044 tgagtacacttactaaaa 19301027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 43927169 - 43927234
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  43927169 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 43927234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 25888351 - 25888246
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| ||||| || ||||| | |||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||||  | |||||||| |||    
T  25888351 tttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtcgatacgaacttattttattacttcgat--agttttagtatact 25888254  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  25888253 tgctaaaa 25888246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 539141 - 539268
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||      
T  539141 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-g 539237  T
Q  101 tttttagtacacttgctaaaatatctatcaa 131  Q
    | ||||||| |||||||||||||||||||||    
T  539238 tatttagtatacttgctaaaatatctatcaa 539268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2873879 - 2874005
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| ||||| |||||||||||||||||||||  ||||  |  ||| | ||||||||||      
T  2873879 ggcattaaaataatttacacatcctaaatattaacattattgctaaattaagattaacacagtcctcgtgggaacga--tatttttactacttcgata-g 2873975  T
Q  101 tttttagtacacttgctaaaatatctatca 130  Q
    | ||||||||||||||||||||||||||||    
T  2873976 tatttagtacacttgctaaaatatctatca 2874005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 10967152 - 10967222
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatt 84  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  10967152 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttatt 10967222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 24129104 - 24129158
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcg 68  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24129104 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcg 24129158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 22993534 - 22993450
Alignment:
Q  46 aattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    |||||||||||||||  |||||||||| |||||||| |||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  22993534 aattgagattaacacgatcctcgtggaaacgaactttattttattacttcgatag-tttttagtacacttgctaaaatatctatca 22993450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 45896710 - 45896775
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  45896710 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgg 45896775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 3840846 - 3840969
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||| | |||||  ||||| ||||| | | ||||  ||||  || ||| |||| |||||| |||||||    
T  3840846 caaaataatttatagatcctaaatatttactttatttctaaattacgattaccacagactttgtgggaacgatatttttt-attatttcgatgcattttt 3840944  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||    
T  3840945 agtacacttgctaaaatatctatca 3840969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 54724062 - 54724178
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| |||||||||||||| |||||||||| ||||||| |||||||| ||||||||||  ||||  |  ||| | |||||||||| || ||||    
T  54724062 aaaataatttacacatcctaaatattaactttattgctaaattgaaattaacacggtcctcgtgggaacga--tatttttactacttcgata-atattta 54724158  T
Q  107 gtacacttgctaaaatatct 126  Q
    ||||||||||||||||||||    
T  54724159 gtacacttgctaaaatatct 54724178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30691050 - 30691120
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  30691050 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 30691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 6922840 - 6922905
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  6922840 caaaataatttacacatcctaaatattaactttattgctaaattgagattaacacagtcttcgtgg 6922905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 47055253 - 47055341
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaa-cttatttgattacttcgatacat 101  Q
    |||| |||||||| ||||| || ||||| | ||||||||||||||||| |||||||||||||||| || |||| |||||||||||||||    
T  47055253 tttacacatcctagatattaacgttatttctaaattgagattaacacaatcctcgtggatacgaacctaattttattacttcgatacat 47055341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 7486899 - 7487013
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||||| ||||  ||||  |  ||| ||||||||||||  | |||||||||||    
T  7486899 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgata-gtatttagtacact 7486995  T
Q  114 tgct-aaaatatctatca 130  Q
    |||| |||||||||||||    
T  7486996 tgctaaaaatatctatca 7487013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12541179 - 12541113
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctc 67  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||    
T  12541179 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctc 12541113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 31857913 - 31857979
Alignment:
Q  25 taaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattac 91  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||  ||||||||| |||||    
T  31857913 taaatatttactttattgctaaattgagattaacacaatccgcgtggataataacttattttattac 31857979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 8461368 - 8461307
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctc 67  Q
    ||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  8461368 caaaataatttataaatcctaaatatttactttatttctaaattgagattaacacattcctc 8461307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 28266246 - 28266303
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  28266246 tttacacatcctaaatatttagcttattgctaaattgagattaacacagtcctcgtgg 28266303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 44509023 - 44509095
Alignment:
Q  57 acacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatcaa 131  Q
    |||||| |||||||||||| ||||||||| |||||||||||  | ||||||||||||| ||||||||| ||||||    
T  44509023 acacagccctcgtggatacaaacttattttattacttcgat--agttttagtacacttactaaaatatttatcaa 44509095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 30219833 - 30219759
Alignment:
Q  47 attgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||||||| |||||| | ||||  ||||| |||||| ||||||||||| ||||||||||| |||||||||||    
T  30219833 attgagattaaaacagtctttgtgggaacgaatttattttattacttcgatgcatttttagtaaacttgctaaaa 30219759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 6434643 - 6434527
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacga-acttatttgattacttcgatacatttttagtacac 112  Q
    |||| ||||| |||||||| || ||||||  |||||||||||||||||||||||||||  |||| | || | | ||||||||||||  | |||||| |||    
T  6434643 tttacacatcataaatattaaccttattgttaaattgagattaacacagtcctcgtgggaacgatatttttattattacttcgata-gtatttagtgcac 6434545  T
Q  113 ttgctaaaatatctatca 130  Q
    ||||||||| ||||||||    
T  6434544 ttgctaaaaaatctatca 6434527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 55031905 - 55031856
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgattacttcgat 97  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  55031905 ttgaaattaacactgtcctcgtggatacgaacttattttattacttcgat 55031856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 11190841 - 11190969
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||| |||||| |||| ||||||||| |||| || ||||| | ||||||||||||| ||||| |||||||  ||||  |  ||| | ||||||||||      
T  11190841 ggcattaaaataatttacacatcctaagtattaaccttattactaaattgagattaatacagttctcgtgggaacga--tatttttactacttcgata-g 11190937  T
Q  101 tttttagtacacttgctaaaatatctatcaag 132  Q
    | |||||||||||| |||||||||||||||||    
T  11190938 tatttagtacacttactaaaatatctatcaag 11190969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 28327687 - 28327751
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| |  ||||||| ||||||| |||||||||||||||||||    
T  28327687 aaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 28327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 28331012 - 28331076
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| |  ||||||| ||||||| |||||||||||||||||||    
T  28331012 aaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcctcgtgg 28331076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 32287191 - 32287075
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| ||||||||||||||||||| |   ||||||| |||||    |||| |||||||||||  | |    
T  32287191 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagttcctatggatacaaacttataaattttattacttcgat--agt 32287094  T
Q  103 tttagtacacttgctaaaa 121  Q
    ||||||||||||| |||||    
T  32287093 tttagtacacttgttaaaa 32287075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 10106480 - 10106431
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagatt 55  Q
    ||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  10106480 caaaataatttatacatcctaaatatttactaaattgctaaattgagatt 10106431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 18641637 - 18641580
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||| || ||||| || ||||||| |||||||||||||||||||||||||||    
T  18641637 tttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgg 18641580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 18644633 - 18644576
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||| || ||||| || ||||||| |||||||||||||||||||||||||||    
T  18644633 tttacacatcttagatattaaccttattgctaaattgagattaacacagtcctcgtgg 18644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 282039 - 281995
Alignment:
Q  38 tattgcaaaattgagattaacacagtcctcgtggatacgaactta 82  Q
    |||||| || |||||||||||||||||||| ||||||||||||||    
T  282039 tattgctaatttgagattaacacagtcctcttggatacgaactta 281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 50461402 - 50461298
Alignment:
Q  28 atatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatcta 127  Q
    ||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | ||| |||||||||| ||||||||||    
T  50461402 atattaacgttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttggtacacttgccaaaatatcta 50461306  T
Q  128 tcaagttt 135  Q
    ||| ||||    
T  50461305 tcatgttt 50461298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 50096956 - 50097020
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaa 119  Q
    |||||||  ||||||||||||||||    || |||||||||||| ||||||||||||||||||||    
T  50096956 acagtccctgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaa 50097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 53816157 - 53816212
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgt 69  Q
    |||| |||||||||||||| || ||||||  ||||||||||||||| |||||||||    
T  53816157 tttacacatcctaaatattaaccttattgttaaattgagattaacatagtcctcgt 53816212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 18542912 - 18542986
Alignment:
Q  45 aaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaa 120  Q
    |||||||||||||||| |||||| |||| |||||||| |||| |||| ||||||  | |||||||||||||| ||||    
T  18542912 aaattgagattaacacggtcctcatggaaacgaacttgattttattaattcgat--agttttagtacacttgttaaa 18542986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 28266344 - 28266373
Alignment:
Q  103 tttagtacacttgctaaaatatctatcaag 132  Q
    ||||||||||||||||||||||||||||||    
T  28266344 tttagtacacttgctaaaatatctatcaag 28266373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 2405755 - 2405879
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2405755 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 2405854  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    ||||||||||||||||  |||||||    
T  2405855 agtacacttgctaaaaattctatca 2405879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 21111036 - 21110909
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  21111036 caaaataatttatacatcctaaatatttactttattgctaaattgagagtaacacagtcctcgtggatacgaacatattttattacttcgatgcattttt 21110937  T
Q  106 agtacacttgctaaaatatctatcaagtt 134  Q
    ||||||||||||||||  |||||||||||    
T  21110936 agtacacttgctaaaa-gtctatcaagtt 21110909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 49853016 - 49852900
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||||    
T  49853016 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcatgaatgcgaacttattttattacttcgatacattttt 49852917  T
Q  106 agtacacttgctaaaat 122  Q
    |||||||||||||||||    
T  49852916 agtacacttgctaaaat 49852900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 42022874 - 42022989
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  42022874 caaaataatttatacatcctaaatatttactttattgttaaattgagattaacacagtcctcgtggatacgaacttattttattacttcaatgcattttt 42022973  T
Q  106 agtacacttgctaaaa 121  Q
    |||| | |||||||||    
T  42022974 agtatatttgctaaaa 42022989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 21018345 - 21018230
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| || |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21018345 caaaataatttatatattctaaatatttactttattgttaaattgaggttaacacagtcctcgtggatacgaacttattttattacttcgatgcattttt 21018246  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||| || |||||    
T  21018245 agtacacctgttaaaa 21018230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 45941662 - 45941779
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||  || ||| |||||||||||||||||||    
T  45941662 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacattttt 45941760  T
Q  106 agtacacttgctaaaatat 124  Q
    |||||||||||||||||||    
T  45941761 agtacacttgctaaaatat 45941779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 41058180 - 41058071
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||       |||||||    
T  41058180 caaaataatttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattac------gcattttt 41058087  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  41058086 agtacacttgctaaaa 41058071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 29643081 - 29642994
Alignment:
Q  34 actttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  29643081 actttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcaatgcatttttagtacacttgctaaaa 29642994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 6070846 - 6070725
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| |||| ||||  ||||  |  ||| |||||||||||||  ||||    
T  6070846 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacaatccttgtgggaacga--tgtttttattacttcgatac-gtttt 6070750  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    | |||||||||||||||||||||||    
T  6070749 attacacttgctaaaatatctatca 6070725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 28111293 - 28111414
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | ||||    
T  28111293 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 28111389  T
Q  107 gtacacttgctaaaatatctatcaa 131  Q
    |||||||||||||||||||||||||    
T  28111390 gtacacttgctaaaatatctatcaa 28111414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 1950327 - 1950269
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  1950327 ttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgg 1950269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 23021800 - 23021687
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| |||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  23021800 tttatacatcctaaatatttacttgattgctaaattgagattaacagagtcctcatgggaacga--tatttttactacttcgata-gtatttagtacact 23021704  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  23021703 tgctaaaatatctatca 23021687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 2794464 - 2794584
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | ||||    
T  2794464 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 2794560  T
Q  107 gtacacttgctaaaatatctatca 130  Q
    ||||||||||||||| ||||||||    
T  2794561 gtacacttgctaaaagatctatca 2794584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 27536411 - 27536298
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||   ||||  |  ||| | ||||||||||  | |||||||||||    
T  27536411 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgtgaacga--tatttttactacttcgata-gtatttagtacact 27536315  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  27536314 tgctaaaatatctatca 27536298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 49498381 - 49498324
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  49498381 tttacacatcctaaatatttaccttattgctaaattgagattaacacaatcctcgtgg 49498324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 37183744 - 37183686
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgga 72  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||    
T  37183744 tttacacatcctagatattaacattattgctaaattgagattaacacagtcctcgtgga 37183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 20399097 - 20399154
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| |||||||||| ||||||||||||||||||| |||||||    
T  20399097 tttacacatcctagatattaactttattgctaaattgagattaacacagttctcgtgg 20399154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 45960625 - 45960568
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  45960625 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 45960568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 3796714 - 3796650
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| |  |||||||  ||||||||||||||||||||||||||    
T  3796714 aaaataatttacacatcctaaatattaaacttattgctgaattgagattaacacagtcctcgtgg 3796650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 20448093 - 20448189
Alignment:
Q  31 tttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||| |||||||||||||||||||||| ||||  ||||  |  ||| | ||||||||||  | |||||||||||||||||| |||||||||    
T  20448093 tttactttattgctaaattgagattaacacagtccttgtgggaacga--tatttttactacttcgata-gtatttagtacacttgctaaagtatctatca 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 20533860 - 20533956
Alignment:
Q  31 tttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||| |||||||||||||||||||||| ||||  ||||  |  ||| | ||||||||||  | |||||||||||||||||| |||||||||    
T  20533860 tttactttattgctaaattgagattaacacagtccttgtgggaacga--tatttttactacttcgata-gtatttagtacacttgctaaagtatctatca 20533956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 23441159 - 23441095
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| |  ||||||| ||||||| ||||||||||||| |||||    
T  23441159 aaaataatttacacatcctaaatattaatcttattgccaaattgaaattaacacagtccccgtgg 23441095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 8435439 - 8435478
Alignment:
Q  82 atttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  8435439 attttattacttcgatatatttttagtacacttgctaaaa 8435478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 34065040 - 34064974
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt 81  Q
    |||| |||||||||||||| |||||||||| |  |||||||||||||| || || |||||||||||||    
T  34065040 tttacacatcctaaatattaactttattgctag-ttgagattaacacaatcttcatggatacgaactt 34064974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 22456562 - 22456480
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||  ||||||||||||||||    || |||||||||||  ||||||||||||||||||||||  || ||||||||||||    
T  22456562 acagtccctgtggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagttc-atcaagtttttg 22456480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 31205104 - 31205138
Alignment:
Q  37 ttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||    
T  31205104 ttattgctaaattgagattaacacagtcctcgtgg 31205138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 50196829 - 50196767
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaac-acagtcctcgtggatac 75  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||| || ||||||||||||||    
T  50196829 tttacacatcctagatattaactttattgctaagttgagattaacaacggtcctcgtggatac 50196767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 121
Target Start/End: Complemental strand, 23990178 - 23990138
Alignment:
Q  82 atttgattacttcgatacattttt-agtacacttgctaaaa 121  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  23990178 atttgattacttcgatatattttttagtacacttgctaaaa 23990138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 34732247 - 34732171
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat 83  Q
    |||||| |||| |||||||| |||||  | ||||||  ||||||||||||||||||||   |||||||| |||||||    
T  34732247 aaaataatttacacatcctatatattagccttattgttaaattgagattaacacagtctctgtggatacaaacttat 34732171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 49716670 - 49716743
Alignment:
Q  62 gtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||| | | ||||||||||||  ||||| ||||||||| | || |||||||||||||||||    
T  49716670 gtcctcgtggatacgaactt-tattattacttcgata-gtttttggtacacttg-tcaattatctatcaagtttttg 49716743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 8e-51; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 5538663 - 5538535
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  5538663 ggcatcaaaatattttatacatcctaaatatttactttatttctaaattgaaattaacacagtcctcatggatacgaacttattttattacttcgataca 5538564  T
Q  101 tttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||||||||||| ||||||||    
T  5538563 tttttagtacacttgctaaaa-atctatca 5538535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 14421974 - 14422098
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  14421974 caaaataatttatacatcctaaatatttactttattactaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcattttt 14422073  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||| ||||||||||||||||||    
T  14422074 agtacatttgctaaaatatctatca 14422098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 12583252 - 12583383
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||    
T  12583252 caaaataatttatatatcctaaatatttactttattgctaaattgagattaacatagtcctcgtggatacaaacttattttattatttcgatacattttt 12583351  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||||  |||||||||||||||    
T  12583352 agtacacttgctaaaa-gtctatcaagtttttg 12583383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 23644052 - 23644180
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||  | ||||    
T  23644052 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtggatacgaacttattttattatttcgat--agtttt 23644149  T
Q  106 agtacacttgctaaaatatctatcaagtttt 136  Q
    ||| ||||||||||||  |||||||||||||    
T  23644150 agttcacttgctaaaaagtctatcaagtttt 23644180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 5980180 - 5980072
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||    
T  5980180 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttatgttattacttcgata-gttttt 5980082  T
Q  106 agtacacttg 115  Q
     |||||||||    
T  5980081 ggtacacttg 5980072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 30645721 - 30645835
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  30645721 tttacacatcctatatatttactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--aattttagtacact 30645818  T
Q  114 tgctaaaatatctatca 130  Q
    ||||||||||| |||||    
T  30645819 tgctaaaatatttatca 30645835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 14188407 - 14188522
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  14188407 tttacacatcctagatattaactttattgctaagttgagattaacgcagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 14188504  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||| ||||||    
T  14188505 tgctaaaatatttatcaa 14188522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 31981596 - 31981717
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||| | ||||||||||||||| |||||||||||  | ||||||||||||    
T  31981596 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaacttattttattacttcgat--agttttagtacact 31981693  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    ||||||||  |||||||||||||||    
T  31981694 tgctaaaa-gtctatcaagtttttg 31981717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 31986523 - 31986628
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||  | ||||||||||||    
T  31986523 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaacttattttattacttcgat--agttttagtacact 31986620  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  31986621 tgctaaaa 31986628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 33883206 - 33883122
Alignment:
Q  38 tattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  33883206 tattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaaaa 33883122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 20262791 - 20262905
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||| ||||||||||||||||| |  |||||||||||  | ||||||||||||    
T  20262791 tttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttactgtattacttcgat--agttttagtacact 20262888  T
Q  114 tgctaaaatatctatca 130  Q
    || ||||||||||||||    
T  20262889 tgttaaaatatctatca 20262905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 21049421 - 21049535
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||| ||||||||||||||||| |  |||||||||||  | ||||||||||||    
T  21049421 tttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttactgtattacttcgat--agttttagtacact 21049518  T
Q  114 tgctaaaatatctatca 130  Q
    || ||||||||||||||    
T  21049519 tgttaaaatatctatca 21049535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 22173820 - 22173692
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||  | |||| | |||||||||  | ||||    
T  22173820 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacactgtcctcgtggaaacga--taattttactacttcgat--agtttt 22173725  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
     |||||||||| ||||  |||||||||||||||    
T  22173724 ggtacacttgccaaaaattctatcaagtttttg 22173692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 18695857 - 18695744
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||| ||||||| ||||||||||||||||||||||||| |||||||||||  | ||||||| ||||    
T  18695857 tttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaacttattttattacttcgat--agttttagtgcact 18695760  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||| ||||||||    
T  18695759 tgctaaaa-atctatca 18695744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 5964492 - 5964576
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  5964492 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatggatacgaacttattttattacttcgata 5964576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 14589501 - 14589387
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt-atttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| | ||| || ||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||||||  | |||||||||||    
T  14589501 tttacacatcctacacattaacattattgctaaattgagattaacacagtcctcgtgaatacgaacttaattttattacttcgat--aattttagtacac 14589404  T
Q  113 ttgctaaaatatctatca 130  Q
    ||||||||| ||||||||    
T  14589403 ttgctaaaa-atctatca 14589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 23597439 - 23597504
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  23597439 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 23597504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 41836295 - 41836210
Alignment:
Q  37 ttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||  ||||||||||    
T  41836295 ttattgctaaattgagattaacacagtcctcatggatacgaacttatttttattatttcgatacatttttagtattcttgctaaaa 41836210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 43681762 - 43681658
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||           |||| ||||||||| ||||||||||| |||||||    
T  43681762 caaaataatttacacatcctaaatatttactttattgctaaattgagattaacac-----------atacaaacttattttattacttcgatgcattttt 43681674  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  43681673 agtacacttgctaaaa 43681658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 45155156 - 45155030
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| |||||||||||||||| ||||  ||||||||||||||    |||| |||||||||||  | |    
T  45155156 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctgtggatacgaacttataaattttattacttcgat--agt 45155059  T
Q  103 tttagtacacttgctaaaatatctatcaa 131  Q
    |||||||||||||||||||  ||||||||    
T  45155058 tttagtacacttgctaaaaagtctatcaa 45155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 20887776 - 20887889
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||  ||||  || ||| ||||||||||||  | |||    
T  20887776 caaaataatttatacatcctaaatatttcctttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgata-gtattt 20887873  T
Q  106 agtacacttgctaaaa 121  Q
    |||| |||||||||||    
T  20887874 agtatacttgctaaaa 20887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 4868490 - 4868575
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgata 98  Q
    |||| |||||||||||||| |||||||||| || |||| ||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  4868490 tttacacatcctaaatattaactttattgctaatttgatattaacacattcctcgttgatacgaacttatttttattacttcgata 4868575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 18721174 - 18721109
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  18721174 caaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgg 18721109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 25231316 - 25231429
Alignment:
Q  8 aaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat----ttgattacttcgatacattt 103  Q
    ||||| ||||| ||||||||||||| |  ||||||| ||||||||||||||||||| || ||||||||||||||||    || |||||||||||  | ||    
T  25231316 aaataatttatccatcctaaatattaaacttattgctaaattgagattaacacagt-cttgtggatacgaacttataaaatttattacttcgat--agtt 25231412  T
Q  104 ttagtacacttgctaaa 120  Q
    |||||||||||||||||    
T  25231413 ttagtacacttgctaaa 25231429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 10664191 - 10664304
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  10664191 tttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttagtacact 10664287  T
Q  114 tgctaaaatatctatcaa 131  Q
    |||||||| |||||||||    
T  10664288 tgctaaaa-atctatcaa 10664304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 36710517 - 36710448
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttat 83  Q
    |||| |||||||| ||||| | |||||||| |||||||||||||||||||||  ||||||||||||||||    
T  36710517 tttacacatcctagatattaaatttattgctaaattgagattaacacagtccctgtggatacgaacttat 36710448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 5584319 - 5584256
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtg 70  Q
    |||||| |||| |||||||||||||| || ||||||| ||||||| ||||||||||||||||||    
T  5584319 aaaataatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcctcgtg 5584256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 18824275 - 18824218
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  18824275 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 18824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 18825768 - 18825711
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  18825768 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 18825711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 16954008 - 16954072
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| |||||||||||||| || ||||||   ||||||||||||||||||||||||||    
T  16954008 aaaataatttacacatcctaaatattaacgttattgttgaattgagattaacacagtcctcgtgg 16954072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 37681408 - 37681291
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctc-gtggatacgaactt----atttgattacttcgatacat 101  Q
    |||||| |||| |||||||| ||| | || ||||||  ||||||||||||||||||||| | |||||||| |||||    |||| |||||||||||  ||    
T  37681408 aaaataatttacacatcctagatagtaaccttattgttaaattgagattaacacagtcccctgtggatacaaacttataaattttattacttcgat--at 37681311  T
Q  102 ttttagtacacttgctaaaa 121  Q
    | ||||||||||||||||||    
T  37681310 tattagtacacttgctaaaa 37681291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 14349314 - 14349363
Alignment:
Q  87 attacttcgatacatttttagtacacttgctaaaatatctatcaagttttt 137  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14349314 attacttcgatacatttttagtacacttgttaaaa-gtctatcaagttttt 14349363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 25591366 - 25591244
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| |||||||||||||| || |||| || |||||||||||||||||||  ||||||  ||||  |  ||| |  ||||||||| || ||||    
T  25591366 aaaataatttacacatcctaaatattaaccttatcgctaaattgagattaacacagttttcgtgggaacga--tatttttaccacttcgata-atattta 25591270  T
Q  107 gtacacttgct-aaaatatctatcaa 131  Q
    ||||||||||| ||||||||||||||    
T  25591269 gtacacttgctaaaaatatctatcaa 25591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 13097228 - 13097267
Alignment:
Q  82 atttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  13097228 attttattacttcgatatatttttagtacacttgctaaaa 13097267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21332568 - 21332448
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgataca 100  Q
    |||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21332568 ggcatcaaaatattttattcattctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattacttcgataca 21332469  T
Q  101 tttttagtacacttgctaaaa 121  Q
    |||||||||||||||||||||    
T  21332468 tttttagtacacttgctaaaa 21332448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 7271262 - 7271377
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7271262 caaaataatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 7271361  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  7271362 agtacacttgctaaaa 7271377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 28787208 - 28787093
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  28787208 caaaataatttatacatcctaaatatttactttattgctaaattgagactaacacggtcctcgtggatacgaacttattttattacttcgatacattttt 28787109  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  28787108 agtacacttgctaaaa 28787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 21335581 - 21335454
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  21335581 aaaatattttatacattctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacaaacttattttattacttcgatacattttta 21335482  T
Q  107 gtacacttgctaaaatatctatcaagttt 135  Q
    ||||||||| |||||  ||||||||||||    
T  21335481 gtacacttgttaaaa-gtctatcaagttt 21335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 4099414 - 4099299
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  4099414 caaaataatttatatatcctaaatatttactttattgctaaattgatattaacacagtcctcgtggatacgaacttattttattacttcgatgcattttt 4099315  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  4099314 agtacacttgctaaaa 4099299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 30066555 - 30066670
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  30066555 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacctattttattacttcgatgcattttt 30066654  T
Q  106 agtacacttgctaaaa 121  Q
    |||||| |||||||||    
T  30066655 agtacatttgctaaaa 30066670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 33552365 - 33552480
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33552365 caaaataatttatacatcctaaatatttactctattgttaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatacattttt 33552464  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||| || |||||    
T  33552465 agtacacatgttaaaa 33552480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 19686417 - 19686539
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  | ||||||||||||    
T  19686417 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttactacttcgat--agttttagtacact 19686514  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||| |||||||||    
T  19686515 tgctaaaatatctattaagtttttg 19686539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 26548327 - 26548449
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||| | |||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  26548327 tttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 26548424  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||    
T  26548425 tgctaaaatatctatcaagtttttg 26548449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 28565812 - 28565690
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||| | |||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||  | ||||||||||||    
T  28565812 tttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacctattttattacttcgat--agttttagtacact 28565715  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||    
T  28565714 tgctaaaatatctatcaagtttttg 28565690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 3195328 - 3195443
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  3195328 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 3195425  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||| ||||||    
T  3195426 tgctaaaatatttatcaa 3195443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 30764472 - 30764587
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  30764472 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 30764569  T
Q  114 tgctaaaatatctatcaa 131  Q
    ||||||||||| ||||||    
T  30764570 tgctaaaatatttatcaa 30764587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 30761653 - 30761775
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  30761653 tttacacatcctagatattaactttattgttaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 30761750  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    |||| |||||| |||||||||||||    
T  30761751 tgctgaaatatttatcaagtttttg 30761775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 34652639 - 34652525
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||  | ||||||||||||    
T  34652639 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacaaacttattttattacttcgat--agttttagtacact 34652542  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  34652541 tgctaaaatatctatca 34652525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 34832008 - 34832131
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||  || ||| ||||||||||||| |||||    
T  34832008 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacgatatt-ttttattacttcgatacgttttt 34832106  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    ||||||||||||||| |||||||||    
T  34832107 agtacacttgctaaagtatctatca 34832131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 26551886 - 26552000
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||| | |||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  26551886 tttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 26551983  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  26551984 tgctaaaatatctatca 26552000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 28562244 - 28562130
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||| | |||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||  | ||||||||||||    
T  28562244 tttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacctattttattacttcgat--agttttagtacact 28562147  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  28562146 tgctaaaatatctatca 28562130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 7625345 - 7625453
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaac-ttatttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  7625345 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactttattttactacttcgatgcatttttagtacac 7625444  T
Q  113 ttgctaaaa 121  Q
    |||||||||    
T  7625445 ttgctaaaa 7625453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 19689805 - 19689914
Alignment:
Q  19 acatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgcta 118  Q
    |||||||| ||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||| | |||||||||  | |||||||||||||||||    
T  19689805 acatcctagatattaactttattgctaagttgagattaacacagtgctcgtggatacgaacttattttactacttcgat--agttttagtacacttgcta 19689902  T
Q  119 aaatatctatca 130  Q
    ||||||||||||    
T  19689903 aaatatctatca 19689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 32838116 - 32838236
Alignment:
Q  9 aatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagt 108  Q
    |||| |||| |||||||||||||| || ||||||  |||||||||||||||||||||||||||| ||||  |  ||| ||||||||||||||||||||||    
T  32838116 aataatttacacatcctaaatattaaccttattgataaattgagattaacacagtcctcgtggaaacga--tatttttattacttcgatacatttttagt 32838213  T
Q  109 acacttgctaaaatatctatcaa 131  Q
    |||||||||||||||| ||||||    
T  32838214 acacttgctaaaatatttatcaa 32838236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 2453536 - 2453650
Alignment:
Q  21 atcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaa 120  Q
    |||||||||||| |||||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||  | |||||||||||||||||||    
T  2453536 atcctaaatattaactttattgctaagttgagattaacacagtcctcgtggatacaaacttattttattacttcgat--agttttagtacacttgctaaa 2453633  T
Q  121 atatctatcaagtttttg 138  Q
    |  | |||||||||||||    
T  2453634 a-gtttatcaagtttttg 2453650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 39192574 - 39192680
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||| |||||||||| ||| |||| |||||| |||||||    
T  39192574 caaaataatttatacatcctaaatatttaatttattgctaaattgagattaatacagtcttcgtgaatacgaacttcttttattaattcgatgcattttt 39192673  T
Q  106 agtacac 112  Q
    | |||||    
T  39192674 aatacac 39192680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 22936828 - 22936707
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||    
T  22936828 caaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattt 22936732  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||    
T  22936731 agtacacttgctaaaatatctatca 22936707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 41876642 - 41876520
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | |||    
T  41876642 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattt 41876546  T
Q  106 agtacacttgctaaaatatctatcaa 131  Q
    |||||||||||||||| |||||||||    
T  41876545 agtacacttgctaaaaaatctatcaa 41876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10629442 - 10629539
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    ||||| |||||| |||| |||||||||||| | | |||||||  ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  10629442 ggcattaaaataatttacacatcctaaataataattttattgttaaattgagattaacacagtcctcatggatacaaacttattttattacttcgata 10629539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 42063171 - 42063287
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata-catttttagtaca 111  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||  ||||  |  ||| | ||||||||||  ||||||||||||    
T  42063171 ttttatacatcttaaatatttactttattgctgaattgagattaacatagtcctcgtgggaacga--tatttttactacttcgatagtatttttagtaca 42063268  T
Q  112 cttgctaaaatatctatca 130  Q
    |||||||||| ||||||||    
T  42063269 cttgctaaaaaatctatca 42063287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 31863958 - 31864015
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  31863958 tttatacatcctaaatatttactttattgctaaattgagattaactcagtcctcgtgg 31864015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 43491991 - 43492056
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  43491991 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacggtccttgtgg 43492056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41306401 - 41306349
Alignment:
Q  19 acatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  41306401 acatcctaaatatttaccttattgctaaattgagattaacacagtcctcgtgg 41306349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 18239400 - 18239276
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcga 96  Q
    |||| ||||||| |||| |||||||| | | | || ||||||| | ||||||||||||| |||||  ||||||||||||||    |||| ||||||||||    
T  18239400 ggcaccaaaataatttacacatcctagacagtaaccttattgctagattgagattaacatagtccatgtggatacgaacttataaattttattacttcga 18239301  T
Q  97 tacatttttagtacacttgctaaaa 121  Q
    | |||||||| ||||||||||||||    
T  18239300 ttcatttttaatacacttgctaaaa 18239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40916050 - 40915985
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcct 66  Q
    ||||| |||||| |||| |||||||||||||| || ||||||| ||||||||||||||||||||||    
T  40916050 ggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcct 40915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 14016019 - 14015956
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacga 77  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||| ||||    
T  14016019 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggaaacga 14015956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 17944923 - 17944980
Alignment:
Q  68 gtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||||||||||||    || |||||||||||| ||||||||||||||||||||||    
T  17944923 gtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaa 17944980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 37215288 - 37215399
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| ||||||||||||||||| |||||     |||||||||||||||||||||||||  ||||  |  ||| | |||||||| |  | |||||||||||    
T  37215288 tttacacatcctaaatatttacgttatt-----attgagattaacacagtcctcgtgggaacga--tatttttactacttcgaca-gtatttagtacact 37215379  T
Q  114 tgctaaaatatctatcaagt 133  Q
    |||||||| |||||||||||    
T  37215380 tgctaaaaaatctatcaagt 37215399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28441345 - 28441314
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28441345 ggcatcaaaatattttatacatcctaaatatt 28441314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 40799776 - 40799728
Alignment:
Q  71 gatacgaacttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  40799776 gatacgaacttattttattacttcgat--atttttagcacacttgctaaaa 40799728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 18765577 - 18765527
Alignment:
Q  49 tgagattaacacagtcctcgtggatacgaactta-tttgattacttcgata 98  Q
    ||||||||||||||||||||| ||||||||||||  || ||||||||||||    
T  18765577 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 18765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 31575691 - 31575781
Alignment:
Q  46 aattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||||||| || ||||| ||||| ||||||||| ||| |||||||||||| |   |||||||||||| | ||||||||||||| ||||||    
T  31575691 aattgagattaatacggtccttgtggaaacgaacttatttttattacttcgataaa--attagtacacttg-ttaaatatctatcaaatttttg 31575781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 26752581 - 26752524
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||| || ||||| || ||||||| ||||||||||||||||||| |||||||    
T  26752581 tttacacatcttagatattaacgttattgctaaattgagattaacacagtactcgtgg 26752524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 21915399 - 21915481
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgatt-acttcgatacatttttagtacacttgctaaaatatctatcaa 131  Q
    ||||||||||||| |||||| || | ||||||||| ||| || ||||| |||  ||||||||||||||||| |||||||||||||    
T  21915399 ttgagattaacacggtcctcatgaaaacgaacttaattgttttacttcaatag-tttttagtacacttgct-aaatatctatcaa 21915481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 2731 - 2846
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2731 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcattttt 2830  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  2831 agtacacttgctaaaa 2846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 198389 - 198512
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  198389 caaaatattttata-atcctaaatatttactttattgctaaattgaaattaacacagtcctcgtggatacgaacttattttattactttgatgcattttt 198487  T
Q  106 agtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||    
T  198488 agtacacttgctaaaatatctatca 198512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 27355 - 27470
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  27355 caaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattacttcgatgcattttt 27454  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  27455 agtacacttgctaaaa 27470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 17106507 - 17106392
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  17106507 caaaataatttatacatcctaaatatttactttattgtgaaattgagattaacactgtcttcgtggatacgaacttattttattacttcgatacattttt 17106408  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  17106407 agtacacttgctaaaa 17106392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 10290228 - 10290344
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  10290228 tttatatatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacaaacttattttattacttcgatacatttttagtacact 10290327  T
Q  114 tgctaaaatatctatca 130  Q
    ||||||||  |||||||    
T  10290328 tgctaaaaagtctatca 10290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 23842677 - 23842568
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||    
T  23842677 caaaataatttatacatcctaaatatttattttattgctaaattgagattaacacagtcctcgtggatacgaacttattttattatttcgata-gttttt 23842579  T
Q  106 agtacacttgc 116  Q
     ||||||||||    
T  23842578 ggtacacttgc 23842568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 34502588 - 34502702
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  | ||||||||||||    
T  34502588 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttactacttcgat--agttttagtacact 34502685  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  34502686 tgctaaaatatctatca 34502702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 14966466 - 14966587
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  14966466 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttttagtacact 14966563  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    ||||||||  |||||||| ||||||    
T  14966564 tgctaaaa-gtctatcaaatttttg 14966587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 3826702 - 3826595
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||| | |||||||||||  | ||||||||||||    
T  3826702 tttacacatcctaaatattaactttattgctaagttgagattaacacagtccttgtggatacgaacttatcttattacttcgat--agttttagtacact 3826605  T
Q  114 tgctaaaata 123  Q
    ||||||||||    
T  3826604 tgctaaaata 3826595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 20186020 - 20186102
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||    
T  20186020 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtgcacttgctaaaaagtctatca 20186102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 22149971 - 22149889
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||    
T  22149971 ttgagattaacacagtcctcgtggatacgaacttattttattacttcgatacatttttagtgcacttgctaaaaagtctatca 22149889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 23848017 - 23848126
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||    
T  23848017 caaaataatttatacatcctaaatatttactttagtgttaaattgagattaacacagtcctcgtggatacgaacttattttattatgtcgata-gttttt 23848115  T
Q  106 agtacacttgc 116  Q
     ||||||||||    
T  23848116 ggtacacttgc 23848126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 23382050 - 23381928
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||  |  ||| ||||||||||||  | |||||||||||    
T  23382050 tttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttattacttcgata-gtatttagtacact 23381954  T
Q  114 tgct-aaaatatctatcaagtttttg 138  Q
    |||| |||| ||||||||||||||||    
T  23381953 tgctaaaaaaatctatcaagtttttg 23381928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 30655693 - 30655815
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||  |  ||| ||||||||||||  | |||    
T  30655693 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgggaacga--tatttttattacttcgata-gtattt 30655789  T
Q  106 agtacacttgctaaaatatctatcaa 131  Q
    ||||||||||||||||||||||||||    
T  30655790 agtacacttgctaaaatatctatcaa 30655815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 14969946 - 14970051
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||| ||||||| ||||||||||||||||| |||||||||||  | ||||||||||||    
T  14969946 tttacacatcctagatattaactttattgctaagttgagattaacatagtcctcatggatacgaacttattttattacttcgat--agttttagtacact 14970043  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  14970044 tgctaaaa 14970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 23008289 - 23008409
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatac 99  Q
    |||||||||||| |||| |||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||| ||||  || | ||||||||||     
T  23008289 ggcatcaaaataatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgata- 23008387  T
Q  100 atttttagtacacttgctaaaa 121  Q
     | |||||||||||||||||||    
T  23008388 gtatttagtacacttgctaaaa 23008409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 23780075 - 23779955
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatac 99  Q
    |||||||||||| |||| |||||||||||||| ||||||||||  |||||||||||||||||||||| ||||||||| ||||  || | ||||||||||     
T  23780075 ggcatcaaaataatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttagatttactacttcgata- 23779977  T
Q  100 atttttagtacacttgctaaaa 121  Q
     | |||||||||||||||||||    
T  23779976 gtatttagtacacttgctaaaa 23779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 5618089 - 5617984
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| ||||| || ||||| | |||||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||  | ||||||||||||    
T  5618089 tttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtggatacaaacttattttattacttcgat--agttttagtacact 5617992  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  5617991 tgctaaaa 5617984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 9954199 - 9954319
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | ||||    
T  9954199 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtattta 9954295  T
Q  107 gtacacttgctaaaatatctatca 130  Q
    ||||||||||||||||||||||||    
T  9954296 gtacacttgctaaaatatctatca 9954319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 11188086 - 11188021
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  11188086 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtccttgtgg 11188021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 23384630 - 23384526
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||  ||||  |  ||| ||||||||||||  | |||||||||||    
T  23384630 tttatacatcctaaatatttactttatttctaaattgaaattaacacagtcctcgtgggaacga--tatttttattacttcgata-gtatttagtacact 23384534  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  23384533 tgctaaaa 23384526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 24371486 - 24371567
Alignment:
Q  40 ttgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaat 122  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||  | |||||||||||||| ||||||    
T  24371486 ttgctaaattgagattaacacagtcctcgtggatacgaacttatttttattacttcgat--aattttagtacacttgttaaaat 24371567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 5260045 - 5260161
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| ||||||||||||||| |||||| ||||||||||||||    |||| |||||||||||  | |    
T  5260045 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacatagtccttgtggatacgaacttataaattttattacttcgat--agt 5260142  T
Q  103 tttagtacacttgctaaaa 121  Q
    ||||||||| |||||||||    
T  5260143 tttagtacatttgctaaaa 5260161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 13095588 - 13095497
Alignment:
Q  28 atatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||| |||||||||| || |||||||||||| |||| |||||||||| ||||||||| |||||||||||  | |||||||||| |||||||||    
T  13095588 atattaactttattgctaagttgagattaacaaagtcatcgtggatacaaacttattttattacttcgat--agttttagtacatttgctaaaa 13095497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11729218 - 11729161
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagt 63  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  11729218 caaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagt 11729161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 3596659 - 3596609
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtc 64  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  3596659 tttatacatcctaaatatttaccttattgctaaattgagattaacacagtc 3596609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 6514232 - 6514347
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || |||||  ||||||||||||||||||||||| || |||||||||||    |||| |||||||||||  | |    
T  6514232 aaaataatttacacatcctagatatt-accttattataaaattgagattaacacagtccttgtagatacgaacttataaattttattacttcgat--agt 6514328  T
Q  103 tttagtacacttgctaaaa 121  Q
    |||||||||||||||||||    
T  6514329 tttagtacacttgctaaaa 6514347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 1125615 - 1125502
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||| |||  ||||  |  ||| | ||||||||||  | |||||||||||    
T  1125615 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcatgggaacga--tatttttactacttcgata-gtatttagtacact 1125519  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||||||||||||    
T  1125518 tgctaaaatatctatca 1125502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 26942313 - 26942256
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||| |||||    
T  26942313 tttatacatcctaaatatttactttattgataatttgagattaacacagtccacgtgg 26942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 11192429 - 11192348
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttg-attacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||| || |||||||| ||||||||| ||| ||||||||||||  ||||||||||||||||| ||||||||||||    
T  11192429 ttgagattaacacggtactcgtggaaacgaacttaattgtattacttcgata-gtttttagtacacttgct-aaatatctatca 11192348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 11402503 - 11402608
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| ||||||||||| || || ||||||| ||| |||||||||||||||||| ||||  ||||  || ||| |||||||||||| || |||||||||||    
T  11402503 tttacacatcctaaattttaaccttattgctaaactgagattaacacagtccttgtgggaacgatatt-ttttattacttcgata-atatttagtacact 11402600  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  11402601 tgctaaaa 11402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 13005429 - 13005553
Alignment:
Q  8 aaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacattt 103  Q
    ||||| |||| |||||||| ||||| |  ||||||| |||||||||||||||||  ||  ||||||||||||||    |||| |||||||||||  | ||    
T  13005429 aaataatttaaacatcctagatattaatcttattgctaaattgagattaacacaacccatgtggatacgaacttataaattttattacttcgat--agtt 13005526  T
Q  104 ttagtacacttgctaaaatatctatca 130  Q
    ||||||||||||||||||  |||||||    
T  13005527 ttagtacacttgctaaaaattctatca 13005553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 14281405 - 14281289
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| ||||||||||||||||||||   |||||||| |||||    |||| ||||||||  || | |    
T  14281405 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtctctgtggatacaaacttataaattttattacttc--tatagt 14281308  T
Q  103 tttagtacacttgctaaaa 121  Q
    |||||||||||||||||||    
T  14281307 tttagtacacttgctaaaa 14281289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 28107640 - 28107524
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||| ||| ||||||||||||||||| |||  ||||||||||||||    |||| |||||||||||  | |    
T  28107640 aaaataatttacacatcctagatattaaccttagtgctaaattgagattaacacaatccctgtggatacgaacttataaattttattacttcgat--agt 28107543  T
Q  103 tttagtacacttgctaaaa 121  Q
    ||||||||||||| |||||    
T  28107542 tttagtacacttgttaaaa 28107524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 28111692 - 28111576
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| ||||  ||||||| |||||  | ||| ||| |||||||||||||||||||||  ||||||||||||||    |||| |||||||||||  | |    
T  28111692 aaaataatttacgcatcctagatattatccttagtgctaaattgagattaacacagtccatgtggatacgaacttataaattttattacttcgat--agt 28111595  T
Q  103 tttagtacacttgctaaaa 121  Q
    |||||||||||||||||||    
T  28111594 tttagtacacttgctaaaa 28111576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5737955 - 5737890
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcct 66  Q
    ||||| |||||| |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||    
T  5737955 ggcattaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtcct 5737890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 9313611 - 9313545
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||| ||||||||||||||||    || |||||||||||| |||||||||||||||| |||||    
T  9313611 acagtccttgtggatacgaacttataaattttattacttcgatatatttttagtacacttgttaaaa 9313545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 9839260 - 9839195
Alignment:
Q  34 actttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgata 98  Q
    |||||||||| || |||||||||||||| ||||||||| |||||| ||| ||| ||||||||||||    
T  9839260 actttattgctaagttgagattaacacaatcctcgtgggtacgaaattatttttattacttcgata 9839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 16731622 - 16731688
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||  ||||||||||||||||    || |||||||||||| ||||||||||||||||||||||    
T  16731622 acagtccctgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaa 16731688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 2379467 - 2379531
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||| ||||| |||||||| || ||||||| |||||||||||||||  ||||||||||    
T  2379467 aaaataatttacacatcttaaatattaaccttattgctaaattgagattaacagtgtcctcgtgg 2379531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 7559935 - 7559864
Alignment:
Q  44 aaaattgagattaacacagtcctcgtggatacgaacttat-ttgattacttcgatacatttttagtacacttg 115  Q
    |||||||||||||| |||||| ||||||| |||||||||| || ||||||||||| ||  |||||||||||||    
T  7559935 aaaattgagattaaaacagtcttcgtggaaacgaacttatctttattacttcgat-caaatttagtacacttg 7559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 13021099 - 13021013
Alignment:
Q  48 ttgagattaacacagtcctcgtggatacgaacttatttg-attacttcgatacatttttagtacacttgctaaaatatctatcaagttt 135  Q
    ||||||||||||| ||||||||||| || || ||| ||| |||||||||||   ||||||||||||||||| |||| ||||||||||||    
T  13021099 ttgagattaacacggtcctcgtggaaacaaatttaattgcattacttcgat-ggtttttagtacacttgct-aaatttctatcaagttt 13021013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 2773198 - 2773164
Alignment:
Q  87 attacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||||||| |||||||||||||||||||||||    
T  2773198 attacttcgattcatttttagtacacttgctaaaa 2773164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 2372568 - 2372625
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtc 64  Q
    |||||| |||| | |||||| ||||| || ||||||| ||||||||||||||||||||    
T  2372568 aaaataatttacaaatcctagatattaaccttattgctaaattgagattaacacagtc 2372625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 2846540 - 2846613
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaac 79  Q
    ||||||| |||| |||||||| ||| | || ||||||| | | ||||||||||||| |||| ||||||||||||    
T  2846540 caaaataatttacacatcctagatagtaaccttattgctagactgagattaacacaatccttgtggatacgaac 2846613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 11183878 - 11183841
Alignment:
Q  82 atttgattacttcgatacatttttagtacacttgctaa 119  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  11183878 attttattacttcgatatatttttagtacacttgctaa 11183841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 20527230 - 20527164
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||  ||||||||||||||||    || |||||||||||| |||| |||||||||||||||||    
T  20527230 acagtccctgtggatacgaacttataaattttattacttcgatatatttgtagtacacttgctaaaa 20527164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 22561039 - 22560954
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgata 98  Q
    ||||||||| |||||||| | ||  ||||| |  ||||||||||||| |||||| ||||  |||| ||||||| ||||||||||||    
T  22561039 ttttatacagcctaaataataacgctattgaattattgagattaacagagtccttgtgggaacgatcttattttattacttcgata 22560954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 28118126 - 28118192
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||  ||||||||||||||||    || |||||||||||| ||||||| ||||||||||||||    
T  28118126 acagtccctgtggatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaa 28118192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 12983440 - 12983383
Alignment:
Q  68 gtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    ||||||||||||||||    || |||||||||||  ||||||||||||||||||||||    
T  12983440 gtggatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaa 12983383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 5596 - 5726
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||| ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||||    
T  5596 caaaataatttatatatcctaaatatttactttattactaaattgagattaaaacagtcctcgtggatacgaacttattttattacttcgatgcagtttt 5695  T
Q  106 agtacacttgctaaaatatctatcaagttttt 137  Q
    ||||||||||||||||  ||||||||||||||    
T  5696 agtacacttgctaaaa-gtctatcaagttttt 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 1427 - 1312
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||    
T  1427 caaaataatttatacgtcctaaatatttactttattgctaaattgagattaacagagtcctcgtggacacgaacttattttattacttcgatgcattttt 1328  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  1327 agtacacttgctaaaa 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 8097 - 8039
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtc 64  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8097 caaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtc 8039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 377 - 508
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||  || |||||||    
T  377 caaaataatttatacatcctaaatatttactatattgctaaattgagattaacacagtcctcgtggatacaaacttattttattacttaaatgcattttt 476  T
Q  106 agtacacttgctaaaatatctatcaagtttttg 138  Q
    | |||||||| |||||  |||||||||||||||    
T  477 aatacacttgataaaa-gtctatcaagtttttg 508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 248764 - 248869
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  248764 caaaataatttatacatccttaatatttactttattgctaaattgagatcaacacagtcctcgtggacacgaacttattttattacttcgatgcattttt 248863  T
Q  106 agtaca 111  Q
    ||||||    
T  248864 agtaca 248869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 92668 - 92739
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatattta-ctttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| ||||||| |||| |||||||||||| | | ||||||||| || |||||| |||||||||||||||||    
T  92668 ggcaacaaaataatttacacatcctaaataataaactttattgccaagttgagaataacacagtcctcgtgg 92739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 90012 - 90119
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  90012 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaacttattttattacttcgatgcatttttagtacact 90111  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  90112 tgctaaaa 90119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 20303 - 20425
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| | ||| |||||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||| |  | ||||||||||||    
T  20303 tttacacatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatatgaacttattttattacttcggt--agttttagtacact 20400  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    |||||||||||||||||||||||||    
T  20401 tgctaaaatatctatcaagtttttg 20425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 13859 - 13968
Alignment:
Q  20 catcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaa 119  Q
    ||||||| | ||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | || | |||||||||||||    
T  13859 catcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttcttgtacacttgctaa 13956  T
Q  120 aatatctatcaa 131  Q
    ||||||||||||    
T  13957 aatatctatcaa 13968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 27875 - 27984
Alignment:
Q  20 catcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaa 119  Q
    ||||||| | ||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||  | || | |||||||||||||    
T  27875 catcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattttattacttcgat--agttcttgtacacttgctaa 27972  T
Q  120 aatatctatcaa 131  Q
    ||||||||||||    
T  27973 aatatctatcaa 27984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 309 - 423
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttt 105  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||  || |||| ||||||||| |||| |||||| |||||||    
T  309 caaaataatttattcatcctaaatatttactttattgctaaattgagattaacacagttct-ttgaatacaaacttattttattatttcgatgcattttt 407  T
Q  106 agtacacttgctaaaa 121  Q
    ||||||||||||||||    
T  408 agtacacttgctaaaa 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 7223 - 7107
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||| ||||||||||||||||||||| ||| |||||||||||  | |||||||||||    
T  7223 tttacacatcctagatattaactttattgctaagttgagattaacaccgtcctcgtggatacgaacttatttttattacttcgat--agttttagtacac 7126  T
Q  113 ttgctaaaatatctatcaa 131  Q
    |||||||||||||||||||    
T  7125 ttgctaaaatatctatcaa 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 223955 - 224076
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||| | ||||||||||||||| |||||||||||  | ||||||||||||    
T  223955 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaacttattttattacttcgat--agttttagtacact 224052  T
Q  114 tgctaaaatatctatcaagtttttg 138  Q
    ||||||||  |||||||||||||||    
T  224053 tgctaaaa-gtctatcaagtttttg 224076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 228881 - 228986
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||  | ||||||||||||    
T  228881 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaacttattttattacttcgat--agttttagtacact 228978  T
Q  114 tgctaaaa 121  Q
    ||||||||    
T  228979 tgctaaaa 228986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 6521 - 6626
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||    
T  6521 tttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttattttattacttcgat--atttttagtacact 6618  T
Q  114 tgctaaaa 121  Q
    || |||||    
T  6619 tggtaaaa 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 2689 - 2794
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||||||  ||||| ||||||||    
T  2689 tttacacatcctagatattaactttattgctaagttgagattaacacagtccttgtggatacgaacttattttattacttcgat--attttaagtacact 2786  T
Q  114 tgctaaaa 121  Q
    || |||||    
T  2787 tggtaaaa 2794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 293254 - 293382
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacattttta 106  Q
    |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||  ||  | |  ||| | ||||||||||  | ||||    
T  293254 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgggaac--aatatttttactacttcgata-gtattta 293350  T
Q  107 gtacacttgctaaaatatctatcaagtttttg 138  Q
    ||||||||||||||||||||||||||||||||    
T  293351 gtacacttgctaaaatatctatcaagtttttg 293382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 67713 - 67600
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||| ||  | ||||||||||||    
T  67713 tttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaacttattttattacttccat--agttttagtacact 67616  T
Q  114 tgctaaaatatctatca 130  Q
    || ||||| ||||||||    
T  67615 tggtaaaa-atctatca 67600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 52764 - 52651
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||| |||||||| ||||| |||||||||| || |||| ||||||| ||||||||||||||||||||||||| |||||||||||  | ||||||| ||||    
T  52764 tttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaacttattttattacttcgat--agttttagtgcact 52667  T
Q  114 tgctaaaatatctatca 130  Q
    |||||||| ||||||||    
T  52666 tgctaaaa-atctatca 52651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 138
Target Start/End: Complemental strand, 118328 - 118204
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacac 112  Q
    |||| |||||||| ||| | |||||||||   |||||||||||||||| |||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  118328 tttacacatcctagataataactttattgttgaattgagattaacacaatcctcgtggatacgaacttatttttattacttcgata-gtttttagtacac 118230  T
Q  113 ttgctaaaatatctatcaagtttttg 138  Q
    ||| |||||||||||| |||||||||    
T  118229 ttgttaaaatatctataaagtttttg 118204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 99094 - 99007
Alignment:
Q  34 actttattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaa 121  Q
    |||||||||| ||||||||||||||||  ||||||| |||||||| ||| ||| |||||||||||| ||||||||||||||||||||||    
T  99094 actttattgctaaattgagattaacaccatcctcgtagatacgaaattatttttattacttcgata-atttttagtacacttgctaaaa 99007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 1807 - 1690
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||||||||    |||| |||||||||||  | |    
T  1807 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgtggatacgaacttataaattttattacttcgat--agt 1710  T
Q  103 tttagtacacttgctaaaat 122  Q
    ||||||||||||||||||||    
T  1709 tttagtacacttgctaaaat 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 5286 - 5222
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  5286 aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtgg 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 153 - 211
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  153 ttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgg 211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 413 - 483
Alignment:
Q  1 ggcatcaaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||||||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  413 ggcatcaaaatattttttacatcttaaatatttactttatttctaaattgagattaacacagttctcgtgg 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 62763 - 62821
Alignment:
Q  13 ttttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  62763 ttttatacatcttaaatatttactttattgctaaattgagattaacacagtcctcgtgg 62821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 752 - 625
Alignment:
Q  7 aaaatattttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaactt----atttgattacttcgatacatt 102  Q
    |||||| |||| |||||||| ||||| || ||||||| |||||||||||||||||||||  ||||||||||||||    |||| || ||||||||  | |    
T  752 aaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccctgtggatacgaacttgtaaattttatcacttcgat--agt 655  T
Q  103 tttagtacacttgctaaaatatctatcaag 132  Q
    |||||||||||||||||||  |||||||||    
T  654 tttagtacacttgctaaaaagtctatcaag 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 48264 - 48173
Alignment:
Q  37 ttattgcaaaattgagattaacacagtcctcgtggatacgaacttat-ttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||| ||  | |||||||||||||||| ||||||||||||    
T  48264 ttattgctaaattgagattaacacagtcatcgtggatacgaacttatatttattacttcaat--agttttagtacacttgct-aaatatctatca 48173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 7591 - 7538
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctc 67  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  7591 tttatacatcctaaatatttactttatttctaaattgagattaacacagtcctc 7538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 3175 - 3047
Alignment:
Q  6 caaaatattttatacatcctaaatatttactttattgcaaaattga------gattaacacagtcctcgtggatacgaacttatttgattacttcgatac 99  Q
    ||||||| |||||||||||||||||||||||  ||||| |||||||      ||||||||||||||||||||  ||||  |  ||| | ||||||||||     
T  3175 caaaataatttatacatcctaaatatttactaaattgctaaattgagattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata- 3079  T
Q  100 atttttagtacacttgctaaaatatctatcaa 131  Q
     | |||||||||||||||||||||||||||||    
T  3078 gtatttagtacacttgctaaaatatctatcaa 3047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 3666 - 3554
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacact 113  Q
    |||||||||| ||| ||||||| ||||| | ||||||||||||||||||||||||||   ||||  |  ||| |||||||| |||  | |||||||||||    
T  3666 tttatacatcttaattatttaccttattactaaattgagattaacacagtcctcgtgagaacga--tatttttattacttcaata-gtatttagtacact 3570  T
Q  114 tgctaaaatatctatc 129  Q
    ||||||||||||||||    
T  3569 tgctaaaatatctatc 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 19645 - 19755
Alignment:
Q  20 catcctaaatatttactttattgcaaaattgagattaacacagtcctcgtggatacgaacttatttgattacttcgatacatttttagtacacttgctaa 119  Q
    ||||||||||||| || ||| ||| |||||||||||||||||||||||||||  ||||  |  ||| | ||||||||||  | ||| |||||||||| ||    
T  19645 catcctaaatattaacgttactgctaaattgagattaacacagtcctcgtgggaacga--tatttttactacttcgata-gtatttggtacacttgccaa 19741  T
Q  120 aatatctatcaagt 133  Q
    ||||||||||||||    
T  19742 aatatctatcaagt 19755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 7530 - 7612
Alignment:
Q  59 acagtcctcgtggatacgaacttat----ttgattacttcgatacatttttagtacacttgctaaaatatctatcaagtttttg 138  Q
    |||||||| ||||||||||||||||    || |||||||||||| ||||||||||||||||||||||  | |||||||||||||    
T  7530 acagtccttgtggatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaa-gtttatcaagtttttg 7612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 374 - 431
Alignment:
Q  14 tttatacatcctaaatatttactttattgcaaaattgagattaacacagtcctcgtgg 71  Q
    |||| |||||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  374 tttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgg 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 10206 - 10296
Alignment:
Q  38 tattgcaaaattgagattaacacagtcctcgtggatacgaactta-tttgattacttcgatacatttttagtacacttgctaaaatatctatca 130  Q
    |||||| ||||||||||||| | |||||||||||| || |||||| ||| ||||||| |||  | |||||||||||||||| ||||||||||||    
T  10206 tattgctaaattgagattaatagagtcctcgtggaaacaaacttatttttattactttgat--agttttagtacacttgct-aaatatctatca 10296  T

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Target: scaffold1657 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 273 - 233
Alignment:
Q  82 atttgattacttcgatacatttttagtacacttgctaaaat 122  Q
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T  273 attttattacttcgatgcatttttaatacacttgctaaaat 233  T

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