View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9868_high_7 (Length: 418)
Name: NF9868_high_7
Description: NF9868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9868_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 390; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 18 - 415
Target Start/End: Complemental strand, 36724306 - 36723909
Alignment:
| Q |
18 |
accttaaaacctgacttgtaaccattaagattgatgttgctaaggttgttggtgttattgttaaggttgttaacataaggagatgaataaattcccttat |
117 |
Q |
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| T |
36724306 |
accttaaaacctgacttgtaaccattaagattgatgttgctaaggttgttggtgttattgttaaggttgttaacatagggagatgaataaattcccttat |
36724207 |
T |
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| Q |
118 |
tgaatccagcaaaagaagagttattattgtgtggcatggaaaaaagaggtccattggaattgttcatcatcttccatccatcattgagatcactacttgg |
217 |
Q |
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| T |
36724206 |
tgaatccagcaaaagaagagttattattgtgtggcatggaaaaaagaggtccattggaattgttcatcatcttccatccatcattgagatcactacttgg |
36724107 |
T |
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| Q |
218 |
tttcgagttgaaattagtgaaggagttgttgatatcagaatttttgacatcaaagtttcttctttgatcaggtcttttggtcatgttggtgctccaaatt |
317 |
Q |
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| T |
36724106 |
tttcgagttgaaattagtgaaggagttgttgatatcagaatttttgacatcaaagtttcttctttgatcaggtcttttggtcatgttggtgctccaaatt |
36724007 |
T |
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| Q |
318 |
gaatcatttagtgatagattagccaaatttgatgtttgatgccttagttgatcactaaattgccaaaaagaattttcattgttgttgttgatgtccat |
415 |
Q |
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| T |
36724006 |
gaatcatttagtgatagactagccaaatttgatgtttgatgccttagttgatcactaaattgccaaaaagaattttcattgttgttgttgatgtccat |
36723909 |
T |
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