View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9869_high_4 (Length: 549)

Name: NF9869_high_4
Description: NF9869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9869_high_4
NF9869_high_4
[»] chr6 (15 HSPs)
chr6 (17-531)||(27772981-27773481)
chr6 (476-531)||(27656493-27656548)
chr6 (479-531)||(8026639-8026691)
chr6 (483-531)||(19712987-19713035)
chr6 (480-531)||(15081906-15081957)
chr6 (481-531)||(8026424-8026474)
chr6 (481-531)||(15082143-15082193)
chr6 (481-531)||(27653252-27653302)
chr6 (481-531)||(30256847-30256897)
chr6 (483-531)||(4868578-4868626)
chr6 (483-531)||(4868814-4868862)
chr6 (483-531)||(5648673-5648721)
chr6 (483-531)||(13740951-13740999)
chr6 (483-531)||(13746451-13746499)
chr6 (483-531)||(33494574-33494622)
[»] chr1 (15 HSPs)
chr1 (483-531)||(52650772-52650820)
chr1 (483-529)||(51459706-51459752)
chr1 (483-527)||(7653515-7653559)
chr1 (480-527)||(25137301-25137348)
chr1 (481-531)||(3169801-3169851)
chr1 (483-529)||(29265990-29266036)
chr1 (483-521)||(51460443-51460481)
chr1 (481-531)||(51589027-51589077)
chr1 (481-531)||(51590073-51590123)
chr1 (495-531)||(856016-856052)
chr1 (483-531)||(4113007-4113055)
chr1 (483-531)||(17452680-17452728)
chr1 (483-531)||(25255346-25255394)
chr1 (483-531)||(31181514-31181562)
chr1 (483-531)||(40079187-40079235)
[»] chr2 (9 HSPs)
chr2 (481-531)||(5509114-5509164)
chr2 (483-522)||(30701126-30701165)
chr2 (481-531)||(17854691-17854741)
chr2 (481-531)||(19191609-19191659)
chr2 (479-532)||(15451446-15451499)
chr2 (483-531)||(16419537-16419585)
chr2 (483-531)||(31700746-31700794)
chr2 (483-531)||(40379210-40379258)
chr2 (483-531)||(40379445-40379493)
[»] chr7 (15 HSPs)
chr7 (483-531)||(36993075-36993123)
chr7 (483-531)||(3038085-3038133)
chr7 (483-527)||(7786255-7786299)
chr7 (483-529)||(21861331-21861377)
chr7 (481-531)||(31257266-31257316)
chr7 (481-531)||(34027428-34027478)
chr7 (478-531)||(43085533-43085586)
chr7 (483-531)||(9688871-9688919)
chr7 (483-531)||(15317587-15317635)
chr7 (483-531)||(18826489-18826537)
chr7 (483-531)||(21054954-21055002)
chr7 (483-531)||(25620171-25620219)
chr7 (481-529)||(29469642-29469690)
chr7 (483-531)||(32474535-32474583)
chr7 (479-531)||(40746533-40746585)
[»] chr5 (17 HSPs)
chr5 (483-531)||(9368630-9368678)
chr5 (481-531)||(8098352-8098402)
chr5 (481-531)||(8287836-8287886)
chr5 (481-531)||(21209920-21209970)
chr5 (483-531)||(8081114-8081162)
chr5 (483-531)||(15480594-15480642)
chr5 (483-531)||(24528575-24528623)
chr5 (481-531)||(21209707-21209757)
chr5 (481-531)||(24487644-24487694)
chr5 (481-531)||(27132992-27133042)
chr5 (478-531)||(18333461-18333514)
chr5 (483-531)||(15480357-15480405)
chr5 (483-531)||(25258095-25258143)
chr5 (483-531)||(25321885-25321933)
chr5 (483-531)||(26137346-26137394)
chr5 (483-531)||(41666758-41666806)
chr5 (483-531)||(41666994-41667042)
[»] chr4 (19 HSPs)
chr4 (483-531)||(28073182-28073230)
chr4 (481-531)||(20822008-20822058)
chr4 (481-531)||(53814673-53814723)
chr4 (479-531)||(21498830-21498882)
chr4 (483-531)||(21685033-21685081)
chr4 (483-531)||(39902564-39902612)
chr4 (483-531)||(52559602-52559650)
chr4 (481-531)||(14783186-14783236)
chr4 (481-531)||(16066100-16066150)
chr4 (481-531)||(53814928-53814978)
chr4 (483-531)||(400566-400614)
chr4 (483-531)||(5398477-5398525)
chr4 (483-531)||(13555248-13555296)
chr4 (483-531)||(22231309-22231357)
chr4 (483-531)||(22845448-22845496)
chr4 (483-531)||(25052887-25052935)
chr4 (479-531)||(28245523-28245575)
chr4 (483-531)||(35788929-35788977)
chr4 (483-531)||(40726756-40726804)
[»] chr8 (15 HSPs)
chr8 (481-531)||(4963389-4963439)
chr8 (473-531)||(19256577-19256635)
chr8 (480-534)||(34653182-34653236)
chr8 (483-531)||(24532422-24532470)
chr8 (484-531)||(4828328-4828375)
chr8 (483-530)||(22638180-22638227)
chr8 (483-534)||(37001496-37001547)
chr8 (483-530)||(38476074-38476121)
chr8 (483-529)||(10615157-10615203)
chr8 (481-531)||(19256819-19256869)
chr8 (481-531)||(24075305-24075355)
chr8 (484-530)||(26800514-26800560)
chr8 (483-527)||(12317085-12317129)
chr8 (483-531)||(39960227-39960275)
chr8 (483-531)||(42846606-42846654)
[»] chr3 (22 HSPs)
chr3 (481-531)||(9272996-9273046)
chr3 (481-531)||(20327848-20327898)
chr3 (483-531)||(7697399-7697447)
chr3 (483-531)||(8019003-8019051)
chr3 (483-531)||(16239626-16239674)
chr3 (483-531)||(33640080-33640128)
chr3 (483-531)||(45828281-45828329)
chr3 (481-531)||(11589820-11589870)
chr3 (481-531)||(13574920-13574970)
chr3 (481-531)||(20303384-20303434)
chr3 (483-529)||(47702410-47702456)
chr3 (481-531)||(50052538-50052588)
chr3 (487-531)||(389640-389684)
chr3 (483-531)||(1723077-1723125)
chr3 (483-531)||(12930129-12930177)
chr3 (483-531)||(16926950-16926998)
chr3 (483-531)||(17638269-17638317)
chr3 (483-531)||(24866232-24866280)
chr3 (483-531)||(31317263-31317311)
chr3 (483-531)||(35038195-35038243)
chr3 (493-529)||(35038439-35038475)
chr3 (483-531)||(54567927-54567975)
[»] scaffold0692 (1 HSPs)
scaffold0692 (483-531)||(5545-5593)
[»] scaffold0181 (1 HSPs)
scaffold0181 (483-531)||(20974-21022)
[»] scaffold0005 (2 HSPs)
scaffold0005 (483-531)||(288658-288706)
scaffold0005 (481-531)||(56494-56544)


Alignment Details
Target: chr6 (Bit Score: 432; Significance: 0; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 17 - 531
Target Start/End: Complemental strand, 27773481 - 27772981
Alignment:
Q  17 agggagacagaaaaccatgcagaatccaattgataaatcataaaccagttgatattgatggatgaacatgagcttctacacactactagtgtagtgattc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27773481 agggagacagaaaaccatgcagaatccaattgataaatcataaaccagttgatattgatggatgaacatgagcttctacacactactagtgtagtgattc 27773382  T
Q  117 agaagtcagcacatggaaaggctcaaaatttaactggcacagattattagctcaactactcattacttctatgataagtattttctaagttccaactact 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27773381 agaagtcagcacatggaaaggctcaaaatttaactggcacagattattagctcaactactcattacttctatgataagtattttctaagttccaactact 27773282  T
Q  217 caaacaccaaaagctgaaccatcggagctatagctaacagtaacaccgtgacttcctaacctcaaccagtaggaattcaacttaccattaatgttttatg 316  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27773281 caaacaccaaaagctgaaccaacggagctatagctaacagtaacaccgtgacttcctaacctcaaccagtaggaattcaacttatcattaatgttttatg 27773182  T
Q  317 atatttttatacgttaccattaaattctcctccatttgtcagagcatattattcagagcatctttaatagggtatctaaatgagttgcataggagactgt 416  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||| ||| |||    
T  27773181 atatttttatacgttatcattaaattctcctccatttgtcagagcatattattc--------------agggtatctaaatgagttgcatagaagaatgt 27773096  T
Q  417 gatctgtcaggtgaagatggatggtggctacgccggtaaaggcacggtgcggtggagatgtaattattagaaattatggttgggcttaacacaatcccac 516  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27773095 gatctgtcaggtgaggatggatggtggctacgtcggtaatggcacggtgcgatggagatgtaattattagaaattatggttgggcttaacacaatcccac 27772996  T
Q  517 aaaaccagcttgtga 531  Q
    |||||||||||||||    
T  27772995 aaaaccagcttgtga 27772981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 27656548 - 27656493
Alignment:
Q  476 gtaattattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||| ||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  27656548 gtaagtattagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtga 27656493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 531
Target Start/End: Complemental strand, 8026691 - 8026639
Alignment:
Q  479 attattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  8026691 attattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 8026639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 19713035 - 19712987
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||||||||||||||| ||||||||    
T  19713035 ttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgtga 19712987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 531
Target Start/End: Original strand, 15081906 - 15081957
Alignment:
Q  480 ttattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||||||  || |||||| |||||||||||||||||||| ||||||||    
T  15081906 ttattagaaatcgtgtttgggcctaacacaatcccacaaaaccggcttgtga 15081957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 8026474 - 8026424
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  8026474 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 8026424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 15082143 - 15082193
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  || |||||| |||||||||||||||||||| ||||||||    
T  15082143 tattagaaatcgtgtttgggcctaacacaatcccacaaaaccggcttgtga 15082193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 27653302 - 27653252
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| ||||||||||||||||||||  |||||||    
T  27653302 tattagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtga 27653252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 30256897 - 30256847
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  30256897 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 30256847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 4868578 - 4868626
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  4868578 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 4868626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 4868814 - 4868862
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  4868814 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 4868862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 5648673 - 5648721
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||||||| | |||||||| | ||||||||| ||||||||    
T  5648673 ttagaaattatggttggacctaacacaacctcacaaaaccggcttgtga 5648721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 13740999 - 13740951
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||||||| |||||||| |||||||||||  |||||||    
T  13740999 ttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtga 13740951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 13746499 - 13746451
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||||||| |||||||| |||||||||||  |||||||    
T  13746499 ttagaaattgtggttgggcctaacacaaccccacaaaaccgacttgtga 13746451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 33494622 - 33494574
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  33494622 ttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtga 33494574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 52650772 - 52650820
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  52650772 ttagaaattatggttgggcctaacacaaccccacaaaaccagcttgtga 52650820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 529
Target Start/End: Original strand, 51459706 - 51459752
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  51459706 ttagaaattgtggttgggcctaatacaatcccacaaaaccagcttgt 51459752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 527
Target Start/End: Complemental strand, 7653559 - 7653515
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagctt 527  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||    
T  7653559 ttagaaattgtggttgggcctaacacaatcccacaaaatcagctt 7653515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 527
Target Start/End: Original strand, 25137301 - 25137348
Alignment:
Q  480 ttattagaaattatggttgggcttaacacaatcccacaaaaccagctt 527  Q
    |||||||||||| ||||||||| |||||||| ||||||||||| ||||    
T  25137301 ttattagaaattgtggttgggcctaacacaaccccacaaaaccggctt 25137348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 3169851 - 3169801
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  3169851 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 3169801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 529
Target Start/End: Complemental strand, 29266036 - 29265990
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  29266036 ttagaaatcgtggttgggcctaacacaaccccacaaaaccagcttgt 29265990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 51460443 - 51460481
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaac 521  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  51460443 ttagaaattatggttgggcctaacacaaccccacaaaac 51460481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 51589077 - 51589027
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  51589077 tattagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtga 51589027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 51590123 - 51590073
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  || |||||| |||||||||||||||||||| ||||||||    
T  51590123 tattagaaatcgtgcttgggcctaacacaatcccacaaaaccggcttgtga 51590073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 531
Target Start/End: Complemental strand, 856052 - 856016
Alignment:
Q  495 gttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  856052 gttgggcctaacacaatctcacaaaaccagcttgtga 856016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 4113007 - 4113055
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  4113007 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 4113055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 17452680 - 17452728
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  17452680 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 17452728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 25255394 - 25255346
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  25255394 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 25255346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 31181514 - 31181562
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||| || ||||||||| |||||||| |||| |||||||||||||||    
T  31181514 ttagaatttgtggttgggcctaacacaaccccataaaaccagcttgtga 31181562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 40079235 - 40079187
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  40079235 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 40079187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 5509164 - 5509114
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  5509164 tattagaaatcatggttgggcctaacacaaccccacaaaaccagcttgtga 5509114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 522
Target Start/End: Original strand, 30701126 - 30701165
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaacc 522  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  30701126 ttagaaattgtggttgggcttaacacaaccccacaaaacc 30701165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 17854691 - 17854741
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| ||||||||||||||||||||  |||||||    
T  17854691 tattagaaatcgtggttgggcctaacacaatcccacaaaaccgacttgtga 17854741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 19191609 - 19191659
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  19191609 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 19191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 532
Target Start/End: Original strand, 15451446 - 15451499
Alignment:
Q  479 attattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtgat 532  Q
    ||||||| ||||| ||||||||| || ||||||||||||||| | |||||||||    
T  15451446 attattaaaaattgtggttgggcctaccacaatcccacaaaatcggcttgtgat 15451499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 16419585 - 16419537
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  16419585 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 16419537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 31700746 - 31700794
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  31700746 ttagaaatcgtggttgggcctaacacaaacccacaaaaccggcttgtga 31700794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 40379210 - 40379258
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  40379210 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 40379258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 40379445 - 40379493
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  40379445 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 40379493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 36993075 - 36993123
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  36993075 ttagaaatcatggttgggcctaacacaaccccacaaaaccagcttgtga 36993123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 3038085 - 3038133
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  3038085 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtga 3038133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 527
Target Start/End: Original strand, 7786255 - 7786299
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagctt 527  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||    
T  7786255 ttagaaatcatggttgggcctaacacaaccccacaaaaccagctt 7786299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 529
Target Start/End: Complemental strand, 21861377 - 21861331
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||  ||||||||| |||||||||||||||||||| ||||||    
T  21861377 ttagaaatggtggttgggcctaacacaatcccacaaaaccggcttgt 21861331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 31257266 - 31257316
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  31257266 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 31257316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 34027478 - 34027428
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  34027478 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 34027428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 531
Target Start/End: Original strand, 43085533 - 43085586
Alignment:
Q  478 aattattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||| ||||||||  |||||| ||||||||||| |||||||||||| |||||||    
T  43085533 aattcttagaaatcgtggttgagcttaacacaaccccacaaaaccaacttgtga 43085586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 9688871 - 9688919
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  |||||||| |||||||||||||| ||||||||| |||||    
T  9688871 ttagaaatcctggttgggtttaacacaatcccataaaaccagcctgtga 9688919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 15317635 - 15317587
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||||||||| ||||||||  ||||||||| || ||||||    
T  15317635 ttagaaattatggttgggcctaacacaacaccacaaaactagtttgtga 15317587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 18826489 - 18826537
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||||||  | |||||||| ||||||||| ||||||||||    
T  18826489 ttagaaattatggttgaacctaacacaaccccacaaaatcagcttgtga 18826537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 21054954 - 21055002
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  21054954 ttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtga 21055002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 25620219 - 25620171
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  25620219 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 25620171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 529
Target Start/End: Complemental strand, 29469690 - 29469642
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||    
T  29469690 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgt 29469642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 32474583 - 32474535
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||||||| |||| ||| ||||||||||| ||||||||    
T  32474583 ttagaaattgtggttgggcctaacgcaaacccacaaaaccggcttgtga 32474535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 531
Target Start/End: Complemental strand, 40746585 - 40746533
Alignment:
Q  479 attattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||||||| |||||||||| |||||||| | ||||||||  ||||||||    
T  40746585 attattagaaatcatggttgggcctaacacaacctcacaaaactggcttgtga 40746533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 9368678 - 9368630
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  9368678 ttagaaattatggttgggcctaacacaaccccacaaaaccggcttgtga 9368630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 8098402 - 8098352
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  |||||||||||||||||| ||||||||||| ||||||||    
T  8098402 tattagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtga 8098352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 8287886 - 8287836
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  8287886 tattagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtga 8287836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 21209920 - 21209970
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  |||||||||||||||||| ||||||||||| ||||||||    
T  21209920 tattagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtga 21209970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 8081114 - 8081162
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  8081114 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtga 8081162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 15480642 - 15480594
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  15480642 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtga 15480594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 24528623 - 24528575
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  24528623 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtga 24528575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 21209707 - 21209757
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  |||||| ||||||||||| ||||||||||| ||||||||    
T  21209707 tattagaaatcgtggttgtgcttaacacaaccccacaaaaccggcttgtga 21209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 24487644 - 24487694
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  |||||||||||||||||| | ||||||||| ||||||||    
T  24487644 tattagaaatcgtggttgggcttaacacaacctcacaaaaccggcttgtga 24487694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 27132992 - 27133042
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  27132992 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 27133042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 531
Target Start/End: Original strand, 18333461 - 18333514
Alignment:
Q  478 aattattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||| |||||| || ||||||||| |||||||| ||||||||||| ||||||||    
T  18333461 aattcttagaatttgtggttgggcctaacacaaccccacaaaaccggcttgtga 18333514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 15480405 - 15480357
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| ||||| || ||||||||||||||||||||    
T  15480405 ttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttgtga 15480357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 25258095 - 25258143
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  25258095 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 25258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 25321885 - 25321933
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  25321885 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 25321933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 26137346 - 26137394
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| ||||| ||||||||||||||| |||||||    
T  26137346 ttagaaatcgtggttgggcctaacataatcccacaaaaccaacttgtga 26137394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 41666758 - 41666806
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  41666758 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 41666806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 41666994 - 41667042
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  41666994 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 41667042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 28073182 - 28073230
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||    
T  28073182 ttagaaattgtggttgggcctaacacaaccccacaaaaccagcttgtga 28073230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 20822058 - 20822008
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||||||||||||||| ||||||||    
T  20822058 tattagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtga 20822008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 53814673 - 53814723
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||||||||||||||| ||||||||    
T  53814673 tattagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtga 53814723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 531
Target Start/End: Complemental strand, 21498882 - 21498830
Alignment:
Q  479 attattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  21498882 attattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 21498830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 21685081 - 21685033
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| |||||||||||||||||| ||||||||| | ||||||||    
T  21685081 ttagaaattgtggttgggcttaacacaaccccacaaaatcggcttgtga 21685033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 39902564 - 39902612
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  39902564 ttagaaatggtggttgggcctaacacaaccccacaaaaccagcttgtga 39902612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 52559650 - 52559602
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  52559650 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtga 52559602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 14783186 - 14783236
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  14783186 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 14783236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 16066150 - 16066100
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| ||||||||||| |||||||||| ||||||    
T  16066150 tattagaaatggtggttgggcctaacacaatcctacaaaaccagtttgtga 16066100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 53814928 - 53814978
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  |||||||||||||||||| |||||||||||  |||||||    
T  53814928 tattagaaatcgtggttgggcttaacacaaccccacaaaaccgacttgtga 53814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 400566 - 400614
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| |||||| ||||||||||| | ||||||||| ||||||||    
T  400566 ttagaaattgtggttgagcttaacacaacctcacaaaaccggcttgtga 400614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 5398477 - 5398525
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||| | |||||||| ||||||||||| ||||||||    
T  5398477 ttagaaatcatggttggacctaacacaaccccacaaaaccggcttgtga 5398525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 13555248 - 13555296
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  |||||||| |||||||||||||| ||||||||| |||||    
T  13555248 ttagaaatcctggttgggtttaacacaatcccataaaaccagcctgtga 13555296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 22231309 - 22231357
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  22231309 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 22231357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 22845448 - 22845496
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  22845448 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 22845496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 25052935 - 25052887
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  25052935 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 25052887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 531
Target Start/End: Original strand, 28245523 - 28245575
Alignment:
Q  479 attattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||  | ||||||| |||||||| ||||||||||| ||||||||    
T  28245523 attattagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtga 28245575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 35788977 - 35788929
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  35788977 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 35788929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 40726804 - 40726756
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| ||||||||||| |||||||| ||||||||    
T  40726804 ttagaaatcgtggttgggcctaacacaatcctacaaaaccggcttgtga 40726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 4963439 - 4963389
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  4963439 tattagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtga 4963389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 531
Target Start/End: Original strand, 19256577 - 19256635
Alignment:
Q  473 gatgtaattattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||| |||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  19256577 gatgtagttattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 19256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 34653236 - 34653182
Alignment:
Q  480 ttattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtgatgt 534  Q
    |||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||    
T  34653236 ttattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgt 34653182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 24532422 - 24532470
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  24532422 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtga 24532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 4828375 - 4828328
Alignment:
Q  484 tagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  4828375 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtga 4828328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 530
Target Start/End: Original strand, 22638180 - 22638227
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtg 530  Q
    ||||||||  |||||||||||||||||| ||||||||||| |||||||    
T  22638180 ttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtg 22638227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 534
Target Start/End: Complemental strand, 37001547 - 37001496
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtgatgt 534  Q
    ||||||||  ||||||||| |||||||| ||||||||||| |||||||||||    
T  37001547 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgatgt 37001496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 530
Target Start/End: Complemental strand, 38476121 - 38476074
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtg 530  Q
    ||||||||| ||||||||| ||||| |||||||||||||| |||||||    
T  38476121 ttagaaattgtggttgggcctaacataatcccacaaaaccggcttgtg 38476074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 529
Target Start/End: Original strand, 10615157 - 10615203
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||| |||||||||||||| ||| |||||||||| |||||||    
T  10615157 ttagaaattgtggttgggcttaacgcaaccccacaaaactagcttgt 10615203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 19256819 - 19256869
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  19256819 tattagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtga 19256869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 24075305 - 24075355
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  24075305 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 24075355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 530
Target Start/End: Original strand, 26800514 - 26800560
Alignment:
Q  484 tagaaattatggttgggcttaacacaatcccacaaaaccagcttgtg 530  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||||||    
T  26800514 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtg 26800560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 527
Target Start/End: Complemental strand, 12317129 - 12317085
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagctt 527  Q
    ||||||||  ||||||||| |||||||||||||||||| ||||||    
T  12317129 ttagaaatcgtggttgggcctaacacaatcccacaaaatcagctt 12317085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 39960275 - 39960227
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  39960275 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 39960227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 42846606 - 42846654
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  42846606 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 42846654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 9273046 - 9272996
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  |||||||||||||||||| ||||||||||| ||||||||    
T  9273046 tattagaaatggtggttgggcttaacacaaccccacaaaaccggcttgtga 9272996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 20327848 - 20327898
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  20327848 tattagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtga 20327898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 7697399 - 7697447
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||| ||| |||||||| ||||||||||||||||||||    
T  7697399 ttagaaattgtggttaggcctaacacaaccccacaaaaccagcttgtga 7697447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 8019051 - 8019003
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  8019051 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtga 8019003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 16239674 - 16239626
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||||||||||||||| ||||||||    
T  16239674 ttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtga 16239626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 33640128 - 33640080
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||| || |||||| |||||||||||||||||||| ||||||||    
T  33640128 ttagaaattgtgattgggcctaacacaatcccacaaaaccggcttgtga 33640080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 45828329 - 45828281
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||||||||    
T  45828329 ttagaaatcatggttgggcctaacacaaccccacaaaacctgcttgtga 45828281  T

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Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 11589870 - 11589820
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  11589870 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 11589820  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 13574920 - 13574970
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||| ||||||||| |||||||| ||||||||||  ||||||||    
T  13574920 tattagaaattgtggttgggcctaacacaaccccacaaaactggcttgtga 13574970  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 20303384 - 20303434
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||| ||||||| | |||||||| ||||||||||| ||||||||    
T  20303384 tattagaaattgtggttggacctaacacaaccccacaaaaccggcttgtga 20303434  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 529
Target Start/End: Original strand, 47702410 - 47702456
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  47702410 ttagaaatcgtggttgggcctaacacaaccccacaaaaccagcttgt 47702456  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Original strand, 50052538 - 50052588
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  50052538 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 50052588  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 389640 - 389684
Alignment:
Q  487 aaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||| |||||| || |||||||||||||||||||| ||||||||    
T  389640 aaattgtggttgagcataacacaatcccacaaaaccggcttgtga 389684  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 1723077 - 1723125
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  1723077 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 1723125  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 12930129 - 12930177
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  12930129 ttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtga 12930177  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 16926950 - 16926998
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  |||||| ||||||||||| ||||||||||| ||||||||    
T  16926950 ttagaaatcgtggttgagcttaacacaaccccacaaaaccggcttgtga 16926998  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 17638317 - 17638269
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||| ||||||||||||||||    
T  17638317 ttagaaatcgtggttgggcctaacacaacccctcaaaaccagcttgtga 17638269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 24866280 - 24866232
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  24866280 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 24866232  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 31317311 - 31317263
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  |||||| || |||||||||||||||||||| ||||||||    
T  31317311 ttagaaatcgtggttgagcctaacacaatcccacaaaaccggcttgtga 31317263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 35038195 - 35038243
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  35038195 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 35038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 529
Target Start/End: Original strand, 35038439 - 35038475
Alignment:
Q  493 tggttgggcttaacacaatcccacaaaaccagcttgt 529  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  35038439 tggttgggcctaacacaaccccacaaaaccagcttgt 35038475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 54567975 - 54567927
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  54567975 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 54567927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 5545 - 5593
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  5545 ttagaaattatggttgggcctaacacaaccccgcaaaaccggcttgtga 5593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Complemental strand, 21022 - 20974
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||  |||||||||||||||||| ||||||||||| ||||||||    
T  21022 ttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtga 20974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 531
Target Start/End: Original strand, 288658 - 288706
Alignment:
Q  483 ttagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    |||||||| |||||||||| ||||||||  |||||||||||||||||||    
T  288658 ttagaaatcatggttgggcctaacacaactccacaaaaccagcttgtga 288706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 531
Target Start/End: Complemental strand, 56544 - 56494
Alignment:
Q  481 tattagaaattatggttgggcttaacacaatcccacaaaaccagcttgtga 531  Q
    ||||||||||  ||||||||| |||||||| ||||||||||| ||||||||    
T  56544 tattagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtga 56494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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