View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9869_high_7 (Length: 464)
Name: NF9869_high_7
Description: NF9869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9869_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 445; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 4 - 448
Target Start/End: Complemental strand, 43926358 - 43925914
Alignment:
| Q |
4 |
agggtaccatacccttagcaaggtcctccaacaacaacactatctcaggtaacacaccaataccactaaattctgcatcagcatccacaaatgaagatcc |
103 |
Q |
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| T |
43926358 |
agggtaccatacccttagcaaggtcctccaacaacaacactatctcaggtaacacaccaataccactaaattctgcatcagcatccacaaatgaagatcc |
43926259 |
T |
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| Q |
104 |
catagccctcacgtgcccattcttcgaagtcacgtgcccaagtggtttccctctataagataccgccacgtcaacagcaccaaagtccatggaatacacg |
203 |
Q |
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| T |
43926258 |
catagccctcacgtgcccattcttcgaagtcacgtgcccaagtggtttccctctataagataccgccacgtcaacagcaccaaagtccatggaatacacg |
43926159 |
T |
|
| Q |
204 |
tcaacattttgcactctcaacgtgaagagcatggagatatctactgtgatatgcggcacacgatgtaccttaatcttcttcagtttcaaccgtacgatct |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43926158 |
tcaacattttgcactctcaacgtgaagagcatggagatatctactgtgatatgcggcacacgatgtaccttaatcttcttcagtttcaaccgtacgatct |
43926059 |
T |
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| Q |
304 |
tgaggtatggatccgacggatagaaaatgtacatggtggtgaataagagtaagaggctcaacgtgcatgtaactcgaaaacggtttgaaaaaacaacgtg |
403 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43926058 |
tgaggtatggatccgacggatagaaaatgtacatggtggtgaataagagtaagaggctcaacgtgcatgtaactcgaaaacggtttgaaaaaacaacgtg |
43925959 |
T |
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| Q |
404 |
agtttgatccatacgaggttggcatggccataggagatttgtgta |
448 |
Q |
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| T |
43925958 |
agtttgatccatacgaggttggcatggccataggagatttgtgta |
43925914 |
T |
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