View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9869_low_38 (Length: 278)
Name: NF9869_low_38
Description: NF9869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9869_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 16807030 - 16807201
Alignment:
| Q |
96 |
gtcatcactgcgtttgttatcgcttaatttctaaggttgtttattcttcacggcttcagcttccaaccgcttctcctcgtagttcattcatgtaattggg |
195 |
Q |
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| T |
16807030 |
gtcatcactgcatttgttatcgcttaatttctaaggttgtttattcttcacggcttcagcttccaaccgcttctcctcgtagttcattcatgtaattgat |
16807129 |
T |
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| Q |
196 |
cttcttgagtactaactcttctttgaacttatagttgttttcatagacgaagcacttcaacttatcgttcat |
267 |
Q |
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||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16807130 |
cttgttgagtcctaactcttctttgaacttatagttgttttcatagacgaagcacttcaacttatcgttcat |
16807201 |
T |
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