View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9869_low_70 (Length: 210)
Name: NF9869_low_70
Description: NF9869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9869_low_70 |
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Alignment Details
Target: chr3 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 1529346 - 1529530
Alignment:
| Q |
17 |
catatggatgattgcattaaatagcgtctcacctattctttgtttccaatgtgcctcccatgccactatctacatgtatgttctgttaacaacttgcttt |
116 |
Q |
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| T |
1529346 |
catatggatgattgcattaaatagcgtctcacctattctttgtttccaatgtgcctcccatgccactatctacatgtatgttctgttaacaacttgcttt |
1529445 |
T |
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| Q |
117 |
gccttttccaatgcattatagatcacattcttttactctcacctattctcgaaattctgcactacagatctacaatctctgctcc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
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| T |
1529446 |
gccttttccaatgcattatagatcacattcttttactctcacctattctcaaaattctgcactacagatctacaatctcttctcc |
1529530 |
T |
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