View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9871_low_10 (Length: 260)
Name: NF9871_low_10
Description: NF9871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9871_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 5663561 - 5663734
Alignment:
| Q |
14 |
ggacgttggagtttgctagacttaaaatttgtatgtttggcattgagtagaatccaaaataggtttattctattgtacttgatttatttctaattgtttt |
113 |
Q |
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| T |
5663561 |
ggacgttggagtttgctagacttaaaatttttacgtttggcattgagtagaatcaaaaacaggtttattctattgtccttgatttatttctaatggtttt |
5663660 |
T |
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| Q |
114 |
tatgctactgttgttgtgattttttatcaatgcagtcaattttcaatagagctgcttctatatactgttaattg |
187 |
Q |
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| T |
5663661 |
tatgctactgttgttgtcattttttatcaatgcagtcaattttcaatagagctgcttctgtatatttttaattg |
5663734 |
T |
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