View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9873_2D_low_1 (Length: 795)

Name: NF9873_2D_low_1
Description: NF9873_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9873_2D_low_1
NF9873_2D_low_1
[»] chr5 (57 HSPs)
chr5 (1-187)||(40833935-40834121)
chr5 (5-186)||(2094737-2094918)
chr5 (1-186)||(20769712-20769897)
chr5 (1-186)||(32936366-32936551)
chr5 (1-187)||(13600606-13600792)
chr5 (1-187)||(18485820-18486006)
chr5 (1-187)||(7145532-7145723)
chr5 (1-187)||(3539757-3539942)
chr5 (1-186)||(30370671-30370856)
chr5 (1-187)||(35363144-35363336)
chr5 (1-187)||(35362078-35362264)
chr5 (1-187)||(15178950-15179136)
chr5 (19-186)||(27843023-27843189)
chr5 (1-187)||(132209-132393)
chr5 (1-187)||(32994307-32994501)
chr5 (57-186)||(19558088-19558218)
chr5 (1-186)||(25363016-25363200)
chr5 (65-186)||(35362984-35363106)
chr5 (65-187)||(32936205-32936328)
chr5 (85-186)||(18485659-18485760)
chr5 (85-186)||(40834180-40834281)
chr5 (65-187)||(2094574-2094697)
chr5 (65-186)||(7145762-7145884)
chr5 (85-186)||(30370511-30370612)
chr5 (65-187)||(13600443-13600568)
chr5 (65-184)||(20769935-20770056)
chr5 (16-114)||(14274308-14274405)
chr5 (128-187)||(20339155-20339214)
chr5 (19-113)||(3294396-3294489)
chr5 (135-187)||(37093738-37093790)
chr5 (85-187)||(25363260-25363362)
chr5 (85-183)||(3539600-3539699)
chr5 (47-114)||(33568984-33569050)
chr5 (16-187)||(29171444-29171611)
chr5 (129-187)||(32458075-32458133)
chr5 (58-164)||(38981778-38981884)
chr5 (85-186)||(15178789-15178890)
chr5 (16-114)||(27342832-27342930)
chr5 (70-113)||(42858555-42858598)
chr5 (387-496)||(24541419-24541527)
chr5 (34-113)||(19850483-19850559)
chr5 (128-183)||(132048-132103)
chr5 (196-282)||(24541363-24541449)
chr5 (402-504)||(38015340-38015442)
chr5 (43-174)||(21258340-21258470)
chr5 (128-187)||(1643538-1643597)
chr5 (128-171)||(2467074-2467117)
chr5 (387-438)||(9012263-9012314)
chr5 (128-187)||(16736800-16736859)
chr5 (128-171)||(24858418-24858461)
chr5 (16-115)||(26065781-26065879)
chr5 (128-187)||(40952066-40952125)
chr5 (128-186)||(2426229-2426287)
chr5 (128-186)||(14871734-14871792)
chr5 (128-186)||(19131126-19131184)
chr5 (128-186)||(33429789-33429847)
chr5 (128-186)||(39589615-39589673)
[»] chr3 (56 HSPs)
chr3 (5-187)||(22316719-22316901)
chr3 (1-187)||(37513090-37513276)
chr3 (5-187)||(22975344-22975526)
chr3 (1-183)||(36229766-36229948)
chr3 (1-187)||(8851965-8852152)
chr3 (1-187)||(25847444-25847630)
chr3 (1-187)||(49620977-49621163)
chr3 (1-185)||(48433963-48434147)
chr3 (1-186)||(28829753-28829937)
chr3 (1-186)||(23043350-23043535)
chr3 (1-168)||(49984871-49985038)
chr3 (1-163)||(55009121-55009282)
chr3 (1-185)||(49711560-49711743)
chr3 (1-183)||(44506049-44506231)
chr3 (1-109)||(9296542-9296650)
chr3 (1-187)||(11121282-11121468)
chr3 (1-187)||(17574372-17574555)
chr3 (65-187)||(25847668-25847791)
chr3 (85-187)||(8851803-8851905)
chr3 (90-186)||(37513340-37513436)
chr3 (1-183)||(3612757-3612938)
chr3 (85-186)||(22316964-22317065)
chr3 (65-186)||(49621202-49621324)
chr3 (85-184)||(11121526-11121626)
chr3 (85-184)||(22975589-22975688)
chr3 (65-183)||(48433801-48433922)
chr3 (65-187)||(28829975-28830099)
chr3 (85-183)||(36230007-36230106)
chr3 (65-187)||(49711400-49711522)
chr3 (16-186)||(35850827-35850994)
chr3 (65-187)||(9296382-9296504)
chr3 (128-186)||(33491692-33491750)
chr3 (85-186)||(44506288-44506389)
chr3 (65-184)||(55009321-55009442)
chr3 (85-183)||(3612598-3612697)
chr3 (128-187)||(33491601-33491660)
chr3 (37-115)||(1341957-1342034)
chr3 (16-107)||(7603570-7603660)
chr3 (128-183)||(23043186-23043241)
chr3 (64-113)||(12012782-12012831)
chr3 (16-113)||(43006934-43007029)
chr3 (16-164)||(45279432-45279578)
chr3 (128-184)||(10687880-10687936)
chr3 (128-187)||(2862700-2862759)
chr3 (128-187)||(41944132-41944191)
chr3 (128-186)||(39930633-39930691)
chr3 (128-183)||(1342180-1342235)
chr3 (231-282)||(29195980-29196031)
chr3 (128-187)||(31574509-31574568)
chr3 (128-187)||(50711251-50711310)
chr3 (128-186)||(11220992-11221050)
chr3 (128-186)||(14463379-14463437)
chr3 (128-186)||(20209150-20209208)
chr3 (128-186)||(44664621-44664679)
chr3 (128-186)||(51000641-51000699)
chr3 (70-115)||(34333730-34333775)
[»] chr1 (54 HSPs)
chr1 (1-187)||(2026720-2026906)
chr1 (2-187)||(1549326-1549511)
chr1 (1-187)||(17611585-17611771)
chr1 (1-187)||(30562783-30562968)
chr1 (1-184)||(30002370-30002552)
chr1 (1-174)||(40902488-40902661)
chr1 (1-186)||(7114024-7114208)
chr1 (2-183)||(25780051-25780231)
chr1 (1-187)||(12139023-12139209)
chr1 (1-187)||(17985449-17985634)
chr1 (1-184)||(12114954-12115138)
chr1 (1-187)||(19897338-19897525)
chr1 (1-170)||(4969380-4969550)
chr1 (85-186)||(40902327-40902428)
chr1 (65-187)||(17611424-17611547)
chr1 (65-186)||(2026943-2027065)
chr1 (85-183)||(17985290-17985388)
chr1 (91-187)||(7113864-7113960)
chr1 (65-183)||(30002214-30002333)
chr1 (85-187)||(12115196-12115298)
chr1 (90-186)||(12139273-12139370)
chr1 (85-187)||(30563027-30563130)
chr1 (65-184)||(25779887-25780011)
chr1 (85-186)||(19897176-19897277)
chr1 (85-187)||(4969609-4969711)
chr1 (376-505)||(28961975-28962104)
chr1 (47-115)||(47193936-47194003)
chr1 (43-114)||(30306852-30306922)
chr1 (132-187)||(40290073-40290128)
chr1 (43-113)||(44066929-44066997)
chr1 (39-186)||(25267181-25267323)
chr1 (129-187)||(25267441-25267499)
chr1 (128-187)||(5586486-5586545)
chr1 (128-171)||(26874483-26874526)
chr1 (128-187)||(29233686-29233745)
chr1 (443-505)||(31089937-31090000)
chr1 (128-187)||(35521463-35521522)
chr1 (128-171)||(45315512-45315555)
chr1 (42-112)||(9172240-9172308)
chr1 (42-112)||(9180222-9180290)
chr1 (128-186)||(34480440-34480498)
chr1 (128-186)||(49564185-49564243)
chr1 (362-504)||(31421019-31421163)
chr1 (131-186)||(49564599-49564655)
chr1 (128-187)||(5618070-5618129)
chr1 (128-171)||(6489128-6489171)
chr1 (128-187)||(25012646-25012705)
chr1 (128-187)||(34480183-34480242)
chr1 (128-186)||(4695192-4695250)
chr1 (128-186)||(7349770-7349828)
chr1 (129-187)||(8853352-8853410)
chr1 (128-186)||(28554190-28554248)
chr1 (128-186)||(31289254-31289312)
chr1 (128-186)||(39672836-39672894)
[»] chr8 (58 HSPs)
chr8 (1-186)||(30904521-30904705)
chr8 (1-183)||(17875771-17875953)
chr8 (1-187)||(35482701-35482887)
chr8 (1-182)||(10682220-10682402)
chr8 (1-187)||(2967869-2968056)
chr8 (1-187)||(27912094-27912281)
chr8 (1-187)||(27958513-27958700)
chr8 (196-547)||(758811-759164)
chr8 (1-186)||(44379522-44379707)
chr8 (3-184)||(17844045-17844224)
chr8 (1-187)||(13327423-13327611)
chr8 (1-187)||(20223098-20223290)
chr8 (1-187)||(3691581-3691768)
chr8 (1-186)||(30928474-30928658)
chr8 (9-187)||(23792749-23792926)
chr8 (1-174)||(4128753-4128926)
chr8 (1-187)||(27523116-27523301)
chr8 (16-186)||(38464641-38464809)
chr8 (1-187)||(42123862-42124051)
chr8 (65-187)||(2968093-2968216)
chr8 (65-187)||(17875993-17876116)
chr8 (65-187)||(35482925-35483048)
chr8 (85-187)||(27912342-27912444)
chr8 (85-187)||(27958761-27958863)
chr8 (1-116)||(7899830-7899945)
chr8 (65-187)||(30904360-30904483)
chr8 (65-187)||(10682060-10682182)
chr8 (65-187)||(14577087-14577212)
chr8 (85-187)||(3691830-3691932)
chr8 (129-187)||(20178370-20178428)
chr8 (90-186)||(38464887-38464982)
chr8 (129-186)||(13327262-13327319)
chr8 (374-505)||(14714909-14715041)
chr8 (85-173)||(44379771-44379859)
chr8 (129-184)||(30928315-30928370)
chr8 (70-113)||(31231317-31231360)
chr8 (128-186)||(20223394-20223452)
chr8 (128-186)||(21660983-21661041)
chr8 (128-186)||(30253882-30253940)
chr8 (85-185)||(42123703-42123802)
chr8 (128-171)||(30463929-30463972)
chr8 (128-171)||(34213400-34213443)
chr8 (128-186)||(28828472-28828530)
chr8 (43-104)||(9734600-9734660)
chr8 (128-184)||(13795516-13795572)
chr8 (1-41)||(14577010-14577050)
chr8 (128-184)||(37727201-37727257)
chr8 (128-187)||(148292-148351)
chr8 (128-187)||(21660725-21660784)
chr8 (129-184)||(26938441-26938496)
chr8 (128-171)||(27712779-27712822)
chr8 (128-187)||(33279194-33279253)
chr8 (128-167)||(34632244-34632283)
chr8 (128-186)||(10925358-10925416)
chr8 (128-186)||(27713020-27713078)
chr8 (128-186)||(34199091-34199149)
chr8 (128-185)||(29596403-29596460)
chr8 (130-187)||(39198614-39198671)
[»] chr2 (55 HSPs)
chr2 (3-187)||(9319965-9320149)
chr2 (1-186)||(20364131-20364316)
chr2 (5-187)||(17846007-17846189)
chr2 (1-187)||(18916624-18916810)
chr2 (2-186)||(10044745-10044929)
chr2 (1-183)||(44536344-44536527)
chr2 (1-174)||(2318505-2318677)
chr2 (1-186)||(10108813-10108999)
chr2 (1-183)||(4261156-4261337)
chr2 (1-187)||(27360118-27360306)
chr2 (1-186)||(601327-601514)
chr2 (1-186)||(30337424-30337609)
chr2 (67-187)||(8322411-8322529)
chr2 (65-187)||(27360345-27360468)
chr2 (65-184)||(9319804-9319924)
chr2 (65-187)||(17846231-17846354)
chr2 (65-187)||(18916848-18916971)
chr2 (65-186)||(20363970-20364092)
chr2 (85-187)||(2318735-2318836)
chr2 (65-185)||(10109038-10109160)
chr2 (65-187)||(4261376-4261502)
chr2 (2-108)||(5547241-5547347)
chr2 (128-187)||(601620-601679)
chr2 (57-183)||(13862496-13862621)
chr2 (16-113)||(31769961-31770057)
chr2 (129-183)||(5547339-5547393)
chr2 (128-186)||(10045035-10045092)
chr2 (16-108)||(43520347-43520439)
chr2 (18-96)||(40044477-40044556)
chr2 (69-115)||(37084688-37084734)
chr2 (129-186)||(18178377-18178434)
chr2 (619-664)||(20117722-20117767)
chr2 (10-86)||(37084743-37084819)
chr2 (58-113)||(9991921-9991976)
chr2 (128-187)||(44536178-44536237)
chr2 (129-187)||(31769781-31769839)
chr2 (16-101)||(41385734-41385817)
chr2 (72-113)||(10520866-10520907)
chr2 (16-87)||(8236858-8236929)
chr2 (128-187)||(30337716-30337775)
chr2 (128-186)||(10714008-10714066)
chr2 (128-185)||(33274653-33274710)
chr2 (393-505)||(3395029-3395141)
chr2 (128-187)||(1650759-1650818)
chr2 (128-171)||(11723720-11723763)
chr2 (128-187)||(30488336-30488395)
chr2 (128-187)||(40710315-40710374)
chr2 (145-187)||(981780-981822)
chr2 (143-185)||(5547103-5547145)
chr2 (129-187)||(26499421-26499479)
chr2 (128-186)||(26499667-26499725)
chr2 (128-186)||(35412133-35412191)
chr2 (70-104)||(44769387-44769421)
chr2 (128-165)||(2450109-2450146)
chr2 (128-185)||(28789123-28789180)
[»] chr6 (34 HSPs)
chr6 (1-187)||(3218302-3218487)
chr6 (1-185)||(33595320-33595504)
chr6 (1-187)||(4242922-4243108)
chr6 (1-186)||(3922699-3922884)
chr6 (8-185)||(14763319-14763496)
chr6 (1-187)||(23068858-23069042)
chr6 (1-158)||(6754946-6755102)
chr6 (9-187)||(10810145-10810322)
chr6 (65-187)||(23068695-23068818)
chr6 (65-187)||(33595543-33595666)
chr6 (65-187)||(4243146-4243269)
chr6 (65-186)||(6755140-6755262)
chr6 (65-185)||(3218152-3218273)
chr6 (91-187)||(3922538-3922634)
chr6 (85-187)||(14763550-14763654)
chr6 (16-115)||(20491668-20491766)
chr6 (128-184)||(14655078-14655134)
chr6 (128-186)||(28852188-28852246)
chr6 (423-499)||(15633800-15633876)
chr6 (128-187)||(2316745-2316804)
chr6 (128-187)||(9899194-9899253)
chr6 (128-187)||(9899451-9899510)
chr6 (56-111)||(11000042-11000096)
chr6 (128-171)||(13178479-13178522)
chr6 (128-171)||(22569019-22569062)
chr6 (128-187)||(24896429-24896488)
chr6 (128-183)||(30121584-30121639)
chr6 (128-171)||(32557393-32557436)
chr6 (129-187)||(1925408-1925466)
chr6 (35-113)||(7808847-7808923)
chr6 (128-186)||(10026140-10026198)
chr6 (129-187)||(10027124-10027182)
chr6 (129-187)||(21926063-21926121)
chr6 (227-285)||(24176096-24176156)
[»] chr7 (54 HSPs)
chr7 (1-174)||(32523213-32523386)
chr7 (1-187)||(32177854-32178040)
chr7 (1-187)||(8437465-8437652)
chr7 (1-187)||(19305904-19306090)
chr7 (1-187)||(49113861-49114046)
chr7 (8-184)||(37453234-37453410)
chr7 (1-184)||(28408244-28408427)
chr7 (1-186)||(7417511-7417697)
chr7 (1-187)||(45746884-45747070)
chr7 (16-187)||(2933444-2933615)
chr7 (1-174)||(32832246-32832420)
chr7 (1-187)||(1511347-1511533)
chr7 (1-187)||(44307610-44307802)
chr7 (1-187)||(10878624-10878811)
chr7 (1-187)||(31894257-31894440)
chr7 (1-119)||(29226337-29226454)
chr7 (65-184)||(32523426-32523546)
chr7 (65-187)||(28408465-28408587)
chr7 (65-187)||(8437304-8437427)
chr7 (65-183)||(32178078-32178197)
chr7 (65-187)||(7417736-7417858)
chr7 (82-183)||(32832475-32832576)
chr7 (85-183)||(2933289-2933387)
chr7 (65-187)||(49114085-49114209)
chr7 (128-187)||(19305739-19305798)
chr7 (1-113)||(30060564-30060675)
chr7 (85-187)||(24986719-24986819)
chr7 (85-187)||(31894500-31894601)
chr7 (85-186)||(1511190-1511290)
chr7 (17-100)||(30154627-30154709)
chr7 (57-115)||(27612271-27612329)
chr7 (65-171)||(45746739-45746846)
chr7 (128-186)||(44307906-44307964)
chr7 (128-187)||(7172930-7172989)
chr7 (387-437)||(4119569-4119619)
chr7 (389-505)||(24708831-24708945)
chr7 (128-161)||(37452478-37452511)
chr7 (128-184)||(8869584-8869640)
chr7 (128-187)||(8522323-8522382)
chr7 (128-171)||(10543667-10543710)
chr7 (128-171)||(34287773-34287816)
chr7 (128-187)||(38495170-38495229)
chr7 (128-187)||(41922281-41922340)
chr7 (128-187)||(43575306-43575365)
chr7 (128-187)||(45055321-45055380)
chr7 (128-187)||(45055578-45055637)
chr7 (129-183)||(10878921-10878975)
chr7 (128-186)||(12423845-12423903)
chr7 (128-186)||(21733068-21733126)
chr7 (128-186)||(31283409-31283467)
chr7 (85-119)||(37453145-37453179)
chr7 (128-186)||(42391296-42391354)
chr7 (128-186)||(44458040-44458098)
chr7 (133-186)||(43161650-43161703)
[»] chr4 (75 HSPs)
chr4 (1-186)||(33692262-33692447)
chr4 (1-184)||(50161277-50161460)
chr4 (1-187)||(23163440-23163626)
chr4 (1-187)||(48419377-48419563)
chr4 (1-186)||(28458682-28458867)
chr4 (5-187)||(21053460-21053642)
chr4 (1-187)||(49621438-49621624)
chr4 (1-186)||(26202522-26202707)
chr4 (1-187)||(9525969-9526155)
chr4 (1-186)||(21707763-21707948)
chr4 (1-186)||(42856962-42857147)
chr4 (1-184)||(3546490-3546674)
chr4 (1-187)||(33369508-33369697)
chr4 (1-174)||(5260206-5260378)
chr4 (1-187)||(20931137-20931324)
chr4 (1-186)||(41689389-41689577)
chr4 (2-187)||(46143433-46143617)
chr4 (3-174)||(13294614-13294786)
chr4 (1-186)||(55140198-55140381)
chr4 (1-186)||(52690257-52690443)
chr4 (5-186)||(37872767-37872944)
chr4 (2-187)||(23549659-23549847)
chr4 (1-187)||(25297679-25297867)
chr4 (1-186)||(2685985-2686164)
chr4 (1-186)||(55742621-55742793)
chr4 (1-186)||(30055208-30055395)
chr4 (65-187)||(49621661-49621784)
chr4 (85-187)||(13294847-13294949)
chr4 (65-186)||(23163281-23163403)
chr4 (82-187)||(20930974-20931079)
chr4 (1-116)||(30799391-30799505)
chr4 (16-167)||(22335454-22335602)
chr4 (65-183)||(33369735-33369854)
chr4 (16-112)||(50977627-50977723)
chr4 (65-186)||(9525805-9525930)
chr4 (65-187)||(42856803-42856925)
chr4 (65-184)||(28458523-28458644)
chr4 (65-185)||(46143273-46143394)
chr4 (85-183)||(50161118-50161218)
chr4 (65-187)||(55742831-55742954)
chr4 (65-187)||(33692486-33692608)
chr4 (65-187)||(37872986-37873109)
chr4 (65-187)||(3546712-3546837)
chr4 (65-187)||(52690095-52690217)
chr4 (128-183)||(30799295-30799350)
chr4 (128-185)||(30799611-30799668)
chr4 (376-505)||(37531594-37531723)
chr4 (131-187)||(30055494-30055550)
chr4 (85-186)||(5260437-5260538)
chr4 (85-172)||(23549473-23549560)
chr4 (128-187)||(32488583-32488642)
chr4 (65-183)||(41689615-41689734)
chr4 (374-505)||(50158506-50158637)
chr4 (70-114)||(53232328-53232372)
chr4 (129-185)||(55140485-55140541)
chr4 (28-115)||(563681-563765)
chr4 (65-155)||(21053329-21053420)
chr4 (129-183)||(25297969-25298023)
chr4 (58-115)||(17872388-17872445)
chr4 (131-171)||(23963107-23963147)
chr4 (128-187)||(9902652-9902711)
chr4 (128-187)||(10993624-10993683)
chr4 (128-187)||(20983913-20983972)
chr4 (128-187)||(20984170-20984229)
chr4 (128-187)||(32922323-32922382)
chr4 (229-285)||(42728384-42728442)
chr4 (128-187)||(52654188-52654247)
chr4 (47-113)||(8646117-8646182)
chr4 (128-186)||(21360457-21360515)
chr4 (128-186)||(45655948-45656006)
chr4 (128-186)||(52538135-52538193)
chr4 (128-186)||(52653931-52653989)
chr4 (130-171)||(9644767-9644808)
chr4 (369-398)||(22192582-22192611)
chr4 (77-114)||(43914640-43914676)
[»] scaffold0169 (1 HSPs)
scaffold0169 (196-543)||(2612-2959)
[»] scaffold0029 (2 HSPs)
scaffold0029 (4-187)||(137079-137260)
scaffold0029 (65-187)||(136915-137038)
[»] scaffold0002 (2 HSPs)
scaffold0002 (4-187)||(330360-330541)
scaffold0002 (65-187)||(330196-330319)
[»] scaffold1577 (1 HSPs)
scaffold1577 (2-183)||(1034-1214)
[»] scaffold0311 (2 HSPs)
scaffold0311 (1-151)||(12632-12782)
scaffold0311 (85-187)||(12841-12943)
[»] scaffold0347 (2 HSPs)
scaffold0347 (1-187)||(12098-12280)
scaffold0347 (131-186)||(11940-11995)
[»] scaffold0012 (1 HSPs)
scaffold0012 (376-505)||(96248-96377)
[»] scaffold0053 (1 HSPs)
scaffold0053 (34-114)||(15232-15310)
[»] scaffold0114 (1 HSPs)
scaffold0114 (373-418)||(1070-1115)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 2e-79; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 40834121 - 40833935
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40834121 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 40834022  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40834021 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 40833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 2094737 - 2094918
Alignment:
Q  5 taggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2094737 taggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataatataaa 2094836  T
Q  105 ggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2094837 ggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 2094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 20769897 - 20769712
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20769897 ctcataggcaaacgcaaatcttcaacatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 20769798  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  20769797 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttgcc 20769712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 32936366 - 32936551
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32936366 ctcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 32936465  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32936466 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 32936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 13600606 - 13600792
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  13600606 ctcataggcaaacgcaaatctttatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattatcattttataaca 13600705  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  13600706 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaagagactaattgtgtaattttgcct 13600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18485820 - 18486006
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  18485820 ctcataggcaaacgtaaatcttcatcatacaagcatagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaga 18485919  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  18485920 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcct 18486006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7145723 - 7145532
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7145723 ctcatatgcaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 7145624  T
Q  101 taaaggactaaatcgtgac-----nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  7145623 taaaggactaaatcgtgacaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcct 7145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3539757 - 3539942
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3539757 ctcataggcaaacataaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 3539856  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         |||||||||||||||||||||||||||||| ||| | |||||||||  |||||||||||    
T  3539857 taaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattatgagactaattgtataattttgcct 3539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30370671 - 30370856
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaat-tctcataaaaaatgataagatattgtcattttataac 99  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  30370671 ctcataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaaatttcataaaaaatgataagatattgtcattttataac 30370770  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  30370771 ataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgtaattttgcc 30370856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 35363144 - 35363336
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaa-----aatgataagatattgtcatttta 95  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||     | |||||||||||||||||||||    
T  35363144 ctcataggcaaacgtaaatcttcatcatacaagcctagaaagtcaaatttctttgaaaaaaatctcataaaattaaaactgataagatattgtcatttta 35363243  T
Q  96 taacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35363244 taacataaaggactaaatcgtgacaaaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 35363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 35362078 - 35362264
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||  ||||||||||| ||| |||||||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  35362078 ctcatagacaaacacaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 35362176  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||        ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  35362177 ataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgcct 35362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 15178950 - 15179136
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||  ||||||||||| ||| || | ||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  15178950 ctcatagacaaactcaaatcttcatcatactagtcaagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 15179048  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| |         |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  15179049 ataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 15179136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 27843189 - 27843023
Alignment:
Q  19 tcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga 118  Q
    |||||||| ||||| |||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |    
T  27843189 tcttcatcatacaaacctagaaaatcaaatttcattggaaaaat-ctcataaaaaatgataaaatattgtcattttataacataaaagactaaatcgtta 27843091  T
Q  119 cnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |        |||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||||    
T  27843090 caaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 132209 - 132393
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||  ||||||||||| ||| |||||||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  132209 ctcatagacaaacacaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 132307  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||        ||||||||||||||||||||||||||  |||||||||  |||||||| | ||||||||||    
T  132308 ataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaa--aaagttaagtaactaattgtgcaattttgcct 132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 32994307 - 32994501
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| || | ||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  32994307 ctcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 32994405  T
Q  100 ataaaggactaaatcgtgac--------nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||                |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  32994406 ataaaggactaaatcgttacaaaaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 32994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 19558088 - 19558218
Alignment:
Q  57 aaaaattctcata-aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaat 155  Q
    ||||| ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||    
T  19558088 aaaaaatctcatacaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaat 19558187  T
Q  156 aaagttaagggactaattgcgtaattttgcc 186  Q
     |||||||||||||||||| |||||||||||    
T  19558188 taagttaagggactaattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 25363200 - 25363016
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| || | ||||||||||||||| ||||| |||| |||| | ||||||||||| ||| ||||||||||||||    
T  25363200 ctcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcattgaataaat-ctcaaacaaaaatgataaaatagtgtcattttataac 25363102  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  25363101 ataaaggactaaatcgttac-aaaaaaagataaatgacgaaagtgttacctaaaattaagttaagggactgtttgtgtaattttgcc 25363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 35363106 - 35362984
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  35363106 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaa 35363007  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    ||||||||||| |||||||||||    
T  35363006 gggactaattgtgtaattttgcc 35362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 32936328 - 32936205
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  32936328 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 32936229  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    | ||||||||| ||||||||||||    
T  32936228 gtgactaattgtgtaattttgcct 32936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 18485760 - 18485659
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18485760 ttgttattttataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 18485661  T
Q  185 cc 186  Q
    ||    
T  18485660 cc 18485659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 40834180 - 40834281
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40834180 ttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40834279  T
Q  185 cc 186  Q
    ||    
T  40834280 cc 40834281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 2094697 - 2094574
Alignment:
Q  65 tcataaaaaatgataagata-ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    ||||||||||||||||  |  |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||    
T  2094697 tcataaaaaatgataactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaa 2094598  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    |||| |||||| ||||||||||||    
T  2094597 gggattaattgtgtaattttgcct 2094574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 7145762 - 7145884
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||    
T  7145762 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 7145861  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    |||| |||||  |||||||||||    
T  7145862 gggattaattatgtaattttgcc 7145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 30370612 - 30370511
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||| ||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30370612 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 30370513  T
Q  185 cc 186  Q
    ||    
T  30370512 cc 30370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 13600568 - 13600443
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtt 161  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| |    
T  13600568 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggt 13600469  T
Q  162 aagggactaattgcgtaattttgcct 187  Q
    || |||||||||| ||||||||||||    
T  13600468 aaaggactaattgtgtaattttgcct 13600443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 20769935 - 20770056
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagtta 162  Q
    |||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| ||||    
T  20769935 tcataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgtta 20770034  T
Q  163 agggactaattgcgtaattttg 184  Q
    |||||||||||| |||||||||    
T  20770035 agggactaattgtgtaattttg 20770056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 14274405 - 14274308
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaa-tcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatc 114  Q
    ||||||||||| ||||| |||  |||| ||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14274405 aaatcttcatcatacaaaccttaaaaactcaaatttcgttgaaaaa--tctcataaaaaataataagatattgtcattttataacataaaggactaaatc 14274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 20339214 - 20339155
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20339214 gataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcct 20339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 3294489 - 3294396
Alignment:
Q  19 tcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    |||||||| ||||| | || ||||||||||| | |||||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  3294489 tcttcatcatacaaacttaaaaaatcaaattccattgaaaaaat-cacataaaaaataataagatattatcattttataacataaaggactaaat 3294396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 37093738 - 37093790
Alignment:
Q  135 gacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37093738 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 37093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 25363260 - 25363362
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| || |||||| |||||||| |||||||||    
T  25363260 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaaattaaggaactaattgtgtaattttg 25363359  T
Q  185 cct 187  Q
    |||    
T  25363360 cct 25363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 3539699 - 3539600
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| |||||||||||||||||||||||| |||||         |||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||    
T  3539699 ttgttattttataacataaaggactaaattgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtataatttt 3539600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 33569050 - 33568984
Alignment:
Q  47 atttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatc 114  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  33569050 atttcattgaaaaaat-ctcattaaaaatgataagatattgtcattttataacataaatgattaaatc 33568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 29171444 - 29171611
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||||||||| ||||| ||| |||| ||| ||||| |||||||||| |||| |||||||| ||| ||||||||||||||||||||||| || ||||| |    
T  29171444 aaatcttcatcatacaaacctggaaa-tcagatttcattgaaaaaat-ctca-aaaaaatgttaaaatattgtcattttataacataaaagaataaattg 29171540  T
Q  116 tgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
     |||        ||| ||||||||||||||||| | |||| |||||||| ||  ||||| ||||||||||||    
T  29171541 ggac-aaaaaaagatgaaggacgaaagtgttacgtgaaattaagttaagagataaattgtgtaattttgcct 29171611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 38981778 - 38981884
Alignment:
Q  58 aaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataa 157  Q
    |||| ||||||||||| ||||||| | ||||||||||||||||||| ||||||||||| ||         ||| |||||||||||||||||||||||| |    
T  38981778 aaaaatctcataaaaattgataaggtgttgtcattttataacataagggactaaatcgagatgaaaaaaagatgaaggacgaaagtgttacctaaaatta 38981877  T
Q  158 agttaag 164  Q
    | |||||    
T  38981878 aattaag 38981884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 15178890 - 15178789
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||| ||||||||||| ||        |||||||||||||| | ||| ||||||| ||||||| |||||||| |||||||||||    
T  15178890 ttgttattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatattatctaaaattaagttaaaggactaatcgcgtaattttg 15178791  T
Q  185 cc 186  Q
    ||    
T  15178790 cc 15178789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 27342832 - 27342930
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaa-aatgataagatattgtcattttataacataaaggactaaatc 114  Q
    ||||||||||| || || | |||||||||| ||||| || ||||||  ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||    
T  27342832 aaatcttcatcataaaaacttagaaaatcatatttcattcaaaaaac-ctcataaaaaaatgataaggtatcgccattttataacataaaggactaaatc 27342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 42858555 - 42858598
Alignment:
Q  70 aaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  42858555 aaaaatgataagatattgacattttataacataaaggactaaat 42858598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 387 - 496
Target Start/End: Complemental strand, 24541527 - 24541419
Alignment:
Q  387 ggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatat 486  Q
    |||||||||||||  || || |||||||| ||||||||| ||||||||||||    |||| ||||||||||||| ||||| | |||||||||| | || |    
T  24541527 ggtaattttataacattattgaaggagttggagattactggataattatgctaccaaaattttagactcattaa-aaaatgtcacatcaattttaaatgt 24541429  T
Q  487 ctaataaaca 496  Q
    ||||||||||    
T  24541428 ctaataaaca 24541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 19850483 - 19850559
Alignment:
Q  34 cctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    |||||||||||| ||||  ||||||||  ||||||||||| ||| ||| |||||| ||||||||||||||||||||||||    
T  19850483 cctagaaaatcagattttattgaaaaa--tctcataaaaa-tgagaaggtattgtaattttataacataaaggactaaat 19850559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 132103 - 132048
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||| ||||||||    
T  132103 gataaaggacgaaaatgttacctaaaattaaattaagggattaattgtgtaatttt 132048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 24541449 - 24541363
Alignment:
Q  196 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 282  Q
    |||||||| | ||| |||||||||||| |   ||| ||||| |||||||||||||||||  |||||| ||||| |||||||||||||    
T  24541449 tgtcacatcaattttaaatgtctaataaacaagtattttgtaaactcaacataacacatacatttttccattggtagatcccaccaa 24541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 38015340 - 38015442
Alignment:
Q  402 ttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgttt 501  Q
    ||||| |||||||| || |||| | |||||||||||| |  ||||| |||| ||||||| ||||| | |||||||||||| || ||||||||| |||| |    
T  38015340 ttgttgaaggagttggaaattattggataattatgctatcaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaataaatatgtat 38015439  T
Q  502 ttt 504  Q
    |||    
T  38015440 ttt 38015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 21258470 - 21258340
Alignment:
Q  43 tcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaa 141  Q
    ||||||||| ||||||||  ||| ||||||| ||||||||||||| |||||| |||||| || |||||||| | |||         ||||||||| ||||    
T  21258470 tcaaatttcattgaaaaa--tcttataaaaattgataagatattgacattttgtaacatgaatgactaaattgagacaacaaaaaagataaaggatgaaa 21258373  T
Q  142 gtgttacctaaaataaagttaagggactaattg 174  Q
    |||||| |||| || |||||||||||| |||||    
T  21258372 gtgttatctaatattaagttaagggacgaattg 21258340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 1643597 - 1643538
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1643597 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1643538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 2467117 - 2467074
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  2467117 gataaaggaccaaactgttacctaaaattaagttaagggactaa 2467074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 9012263 - 9012314
Alignment:
Q  387 ggtaattttataaatttgttaaaggagttagagattactagataattatgct 438  Q
    ||||||||||| |||||||| || ||||| ||||||||||| ||||||||||    
T  9012263 ggtaattttatgaatttgttgaaagagttggagattactaggtaattatgct 9012314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 16736859 - 16736800
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  16736859 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 16736800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 24858461 - 24858418
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  24858461 gataaaggaccaaactgttacctaaaattaagttaagggactaa 24858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 26065781 - 26065879
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||||||||| ||||||| || |||  || ||||| ||||||||| | |||| |||| |||||  || |||||||||||||||||||| || |||||||    
T  26065781 aaatcttcatcatacaagcataaaaatacatatttcattgaaaaaaatgtcatcaaaa-tgatacaattttgtcattttataacataaatgattaaatcg 26065879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 40952125 - 40952066
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  40952125 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 40952066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 2426287 - 2426229
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  2426287 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 2426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 14871792 - 14871734
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14871792 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14871734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 19131126 - 19131184
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  19131126 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 19131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 33429789 - 33429847
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  33429789 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 33429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 39589673 - 39589615
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39589673 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 4e-77; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 22316901 - 22316719
Alignment:
Q  5 taggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22316901 taggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacataaa 22316802  T
Q  105 ggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22316801 ggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 22316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 37513276 - 37513090
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  37513276 ctcataggcaaatgtaaatcttcatcatacaagcctagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatattgtcattttataaca 37513177  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||    
T  37513176 taaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgttattttgcct 37513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 22975526 - 22975344
Alignment:
Q  5 taggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  22975526 taggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaataataagatattgtcattttataacataaa 22975427  T
Q  105 ggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||        |||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  22975426 ggactaaatcgtgacaaaaaaaagataaatgacaaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 22975344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 36229948 - 36229766
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||| ||||||||||||||||||| |||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36229948 ctcataagcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 36229849  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36229848 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 36229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 8851965 - 8852152
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8851965 ctcataggcaaacgtaaatcttcatcaaacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 8852064  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  8852065 taaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcct 8852152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 25847630 - 25847444
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||| || || | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25847630 ctcataggcaaacgtaaatcttcatcatacacgcatatagaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 25847531  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||| ||||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  25847530 taaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagggactaattgtataattttgcct 25847444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 49621163 - 49620977
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  49621163 ctcataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgatgagatattgtcattttataaca 49621064  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||  ||| |||| | ||||||||||||    
T  49621063 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttagaggattaatcgtgtaattttgcct 49620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 48433963 - 48434147
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  48433963 ctcataggcaaacgcaaatcttcatcatacaaacctagaaaatcaaatttctttgaaaaaat-ctcataaaaaatgataagctattgtcattttataaca 48434061  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48434062 taaaggactaaatcgtgacaaaaaaatatataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 48434147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 28829937 - 28829753
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28829937 ctcataggtaaacgcaaatcttcatcatacaagcttagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 28829838  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||    
T  28829837 taaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaaagaactaattgtgtaattttgcc 28829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 23043350 - 23043535
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23043350 ctcataggcaaacgcaaaccttcatcatacaagcctagaaaatcaaatttctttgaaaaaat-ctcataaaaaatgataagatattgtcattttataaca 23043448  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||          ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  23043449 taaaggactaaatcgtgacaaaaaaataaataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttgcc 23043535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 49984871 - 49985038
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||| |||||||||||||| |||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49984871 ctcacaggcaaacgtaaatattcatcatacaaacttagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 49984970  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 168  Q
    |||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||    
T  49984971 taaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggac 49985038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 55009282 - 55009121
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  55009282 ctcataggtaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgattagatattgttattttataaca 55009183  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  55009182 taaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 55009121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 49711560 - 49711743
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttcttt-gaaaaaattctcataaaaaatgataagatattgtcattttataac 99  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||||||| ||||||||    
T  49711560 ctcataggcaaacgtaaatcttcatcatacaagcctaaaaaatcaaatttctttaaaaaaaaatctcataaaaaatgataagatattgtca-tttataac 49711658  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    | |||||||||||| |||||         |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  49711659 aaaaaggactaaattgtgacaaaaaaaa-ataacggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgc 49711743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 44506231 - 44506049
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||  ||||||||||| ||| |||||||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  44506231 ctcatagacaaacacaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 44506133  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  44506132 ataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaatttt 44506049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9296542 - 9296650
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9296542 ctcacaggcaaacgtaaatcttcatcatacatgcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 9296641  T
Q  101 taaaggact 109  Q
    |||||||||    
T  9296642 taaaggact 9296650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 11121468 - 11121282
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| |||||  ||||||||||| ||||||||||||||||||||||||||    
T  11121468 ctcatagttaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttcaaaaa--tctcataaaaattgataagatattgtcattttataaca 11121371  T
Q  101 taaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |  ||||||||| ||||||           |||||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||    
T  11121370 tttaggactaaaccgtgacaaaaaaaaaatataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgctattttgcct 11121282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 17574555 - 17574372
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||| |||| |||||| || ||||||| ||||||||||| | ||||||||  |||||||||||||||||| ||||||| |||||||||||    
T  17574555 ctcatagacaaacgcaaattttcatcataaaagcctaaaaaatcaaattgcattgaaaaa--tctcataaaaaatgataaaatattgtaattttataaca 17574458  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||| ||         ||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||||    
T  17574457 taaaggactaaatcgtaacaaaaaaaa-ataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 25847668 - 25847791
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||    
T  25847668 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaa 25847767  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  25847768 gggactaattgtgtaattttgcct 25847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 8851905 - 8851803
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8851905 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 8851806  T
Q  185 cct 187  Q
    |||    
T  8851805 cct 8851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 37513340 - 37513436
Alignment:
Q  90 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37513340 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 37513436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 3612757 - 3612938
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcat--aaaaaatgataagatattgtcattttataa 98  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||  |||||||||||| ||| | |||||||||||    
T  3612757 ctcatagacaaacgcaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaa-tctcataaaaaaaatgataaaatagtttcattttataa 3612855  T
Q  99 cataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||||||||||||||| || |         ||||||| |||||||||||||||||| | ||||||   ||||||||| ||||||||    
T  3612856 cataaaggactaaattgtta--aaaaaaagataaagaacgaaagtgttacctaaagttaagttacaagactaattgtgtaatttt 3612938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 22316964 - 22317065
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  22316964 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatcgtgtaattttg 22317063  T
Q  185 cc 186  Q
    ||    
T  22317064 cc 22317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 49621202 - 49621324
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||| ||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||    
T  49621202 tcataaaaaaggataactatgttgttattttataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaa 49621301  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    ||||||||||| |||||||||||    
T  49621302 gggactaattgtgtaattttgcc 49621324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 11121526 - 11121626
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11121526 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 11121625  T
Q  184 g 184  Q
    |    
T  11121626 g 11121626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 22975589 - 22975688
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22975589 ttgttattttataacataaaggactaaatcgtaacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 22975688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 48433922 - 48433801
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtt 161  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  48433922 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagtt 48433823  T
Q  162 aagggactaattgcgtaatttt 183  Q
    ||||||||||||||||||||||    
T  48433822 aagggactaattgcgtaatttt 48433801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 28829975 - 28830099
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagtta 162  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||         |||||||||||||||||||| ||||||||||||||    
T  28829975 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttagctaaaataaagtta 28830074  T
Q  163 agggactaattgcgtaattttgcct 187  Q
    |||||||||||| ||||||||||||    
T  28830075 agggactaattgtgtaattttgcct 28830099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 36230007 - 36230106
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36230007 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaatttt 36230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 49711522 - 49711400
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||| |||||||||||  || |||| ||||||||||||||| |||||||||||||         ||||||||||| ||||||||||||||||||||||||    
T  49711522 tcattaaaaatgataactatgttgttattttataacataaatgactaaatcgtga-taaaaaaagataaaggacgtaagtgttacctaaaataaagttaa 49711424  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  49711423 gggactaattgtgtaattttgcct 49711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 35850827 - 35850994
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||||||||| ||||| |||||||||| | ||||  ||||||||  ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  35850827 aaatcttcatcatacaaacctagaaaattagattttattgaaaaa--tctcataaaaagtgataaggtattgtcattttataacataaaagactaaatcg 35850924  T
Q  116 tgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
     |||        ||| ||| |||||||||||||||||||| || ||||  ||| ||||  |||||||||||    
T  35850925 ggac-aaaaaaagatgaagaacgaaagtgttacctaaaattaaattaaaagacgaattatgtaattttgcc 35850994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 9296504 - 9296382
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| | ||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  9296504 tcataaaaaaggataactatgttgttattttataacatagatgactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaa 9296406  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||| ||||||||    
T  9296405 gggactaattgtgtagttttgcct 9296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 33491692 - 33491750
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  33491692 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 33491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 44506288 - 44506389
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  44506288 ttgttattttataacataaaggactaaatcgttacaaaaaaataataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttg 44506387  T
Q  185 cc 186  Q
    ||    
T  44506388 cc 44506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 55009321 - 55009442
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagtta 162  Q
    |||| |||||||||||  || |||| |||| ||||||||||||||||||||||||          ||||||||||||||||||||| |||||||||||||    
T  55009321 tcatgaaaaatgataactatgttgttatttgataacataaaggactaaatcgtgataaaaaaaaagataaaggacgaaagtgttacttaaaataaagtta 55009420  T
Q  163 agggactaattgcgtaattttg 184  Q
    |||||||||||| |||||||||    
T  55009421 agggactaattgtgtaattttg 55009442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 3612697 - 3612598
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| ||||||||||||||||||||||||||| ||         | |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  3612697 ttgttattttataacataaaggactaaatcgttacaaaaaaaaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaatttt 3612598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 33491660 - 33491601
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||    
T  33491660 gataaaggacgaaactgttacctaaaataaagttaaggaactaattgtgtcattttgcct 33491601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 1342034 - 1341957
Alignment:
Q  37 agaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||| ||||||||| |||||||| | || || |||||||||||||||||||||||||| ||||||||||| |||||||    
T  1342034 agaaactcaaatttcattgaaaaagt-ctaattaaaaatgataagatattgtcattttaaaacataaaggaataaatcg 1341957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 7603570 - 7603660
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaagga 107  Q
    |||| |||||| ||||| | || ||| ||| ||||| |||||||||| ||||||||| |||||||||||||| |||||||||| ||||||||    
T  7603570 aaatattcatcatacaaacttaaaaactcagatttcattgaaaaaat-ctcataaaatatgataagatattgacattttataatataaagga 7603660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 23043241 - 23043186
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||    
T  23043241 gataaaggacgaaagtgttacctaaagtaaagttatgggacttattgtgtaatttt 23043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 12012831 - 12012782
Alignment:
Q  64 ctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  12012831 ctcataaaaaatgataaaatattgacattttataacataaaagactaaat 12012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 43006934 - 43007029
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    |||| |||||| ||||| ||  |||| ||| ||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||  |||||||    
T  43006934 aaatattcatcatacaaaccatgaaattcatatttcattgaaaaaat-ctcattaaaa-tgataagatattgtcattttataacataaaaaactaaat 43007029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 45279432 - 45279578
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||||||||| ||||| |||  ||||||| |||   ||||||||  |||||||||||  |||||| | || ||||||||||||| |||||||||||| |    
T  45279432 aaatcttcatcatacaaacctgaaaaatcagattatattgaaaaa--tctcataaaaaccgataaggtgttatcattttataacaaaaaggactaaattg 45279529  T
Q  116 tgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 164  Q
     |||        ||| |||||||||||||||||||||||| || |||||    
T  45279530 ggacgaaaaaaagatgaaggacgaaagtgttacctaaaattaaattaag 45279578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 10687880 - 10687936
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    ||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  10687880 gataaaggatgaaagtgttacctaaaattaagttaagagacgaattgtgtaattttg 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 2862759 - 2862700
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  2862759 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 2862700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 41944132 - 41944191
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | ||||||||||||    
T  41944132 gataaaggactaaactattacctaaaataaagttaagggactaaaagtgtaattttgcct 41944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 39930691 - 39930633
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||||||||||||||||| ||||||| |||| ||||| |||||| ||||    
T  39930691 gataaaggactaaagtgttacctaaaattaagttaaaggacgaattgtgtaattatgcc 39930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 1342180 - 1342235
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||||||||||||||||||||| ||| || |||||||||||  ||||| ||||||||    
T  1342180 gataaaggacgaaagtgttacttaatattaagttaagggataaattgtgtaatttt 1342235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 29196031 - 29195980
Alignment:
Q  231 ctttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 282  Q
    |||||| ||||||  | |||||||| ||||||||||||||||||||||||||    
T  29196031 ctttgtcaactcattaaaacacatgcattttttcattgttagatcccaccaa 29195980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 31574509 - 31574568
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  31574509 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 31574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 50711251 - 50711310
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  50711251 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 50711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 11221050 - 11220992
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  11221050 gataaaggatcaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 11220992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 14463379 - 14463437
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14463379 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14463437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 20209208 - 20209150
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  20209208 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 20209150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 44664679 - 44664621
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44664679 gataaaggactaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 51000699 - 51000641
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| |||  |||||||||||| ||| |||||||||  |||||||||||||||    
T  51000699 gataaaggactaaaacgttacctaaaattaagataagggactgtttgcgtaattttgcc 51000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 34333775 - 34333730
Alignment:
Q  70 aaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    |||||||||| ||||||| |||||||||||||||| || |||||||    
T  34333775 aaaaatgatatgatattgacattttataacataaaagattaaatcg 34333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 4e-77; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 2026906 - 2026720
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2026906 ctcataggcaaacgtaaatcttcttcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 2026807  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2026806 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 2026720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 1549511 - 1549326
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  1549511 tcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatattgtcattttataacat 1549412  T
Q  102 aaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  1549411 aaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcct 1549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 17611585 - 17611771
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  17611585 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgacattttataaca 17611684  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17611685 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcct 17611771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 30562968 - 30562783
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30562968 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 30562869  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||| || ||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  30562868 taaagaaccaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcct 30562783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 30002370 - 30002552
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  30002370 ctcataggcaaacgtaaatcttcatcatacaaacctagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatattgtcattttataaca 30002469  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  30002470 taaaggactaaatcgtgac-aaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttg 30002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 40902488 - 40902661
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||    
T  40902488 ctcataggcaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaataatctcataaaaaatgataagatattgtcatcttataaca 40902587  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    |||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40902588 taaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattg 40902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 7114024 - 7114208
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7114024 ctcataggcaaacgtaaatcttcatcatacaagcctaaaaaatcaaatttatttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 7114123  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||| |||||         ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  7114124 taaaggactaaattgtgacaaaaaaaa-ataaaggacgaaagtgttatctaaaataaagttaatggactaattgtgtaattttgcc 7114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 25780051 - 25780231
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25780051 tcatatgcaaacgtaaatcttcatcatacaagcttagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacat 25780150  T
Q  102 aaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||| ||||||||| ||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25780151 aaatgactaaatcatgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 25780231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 12139209 - 12139023
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12139209 ctcatatgcaaacgcaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 12139110  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         |||||| |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||    
T  12139109 taaaggactaaatcgtgacaaaaaaaaaataaagaacgaaagtattacctaaaataaaattaagagactaattgtgtaattttgcct 12139023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 17985449 - 17985634
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  17985449 ctcataggcaatcgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaat-ctcataaaaaatgataagatattgtcattttataata 17985547  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||| |||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |  |||||||||    
T  17985548 taaaggattaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgctattttgcct 17985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 12115138 - 12114954
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||| | ||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||| | |||||||||||||    
T  12115138 ctcatagacaaatgcaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaat-ctcataaaaaatgataaaatagtatcattttataaca 12115040  T
Q  101 taaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    ||||||| |||||||| ||          ||||||||| |||| ||||||||||||| |||||||||||||||||  |||||||||    
T  12115039 taaaggattaaatcgttacaaaaaaaaaagataaaggatgaaaatgttacctaaaattaagttaagggactaattatgtaattttg 12114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 19897338 - 19897525
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||| | |||||| |||| ||| |||||||||||||||||||| || ||||||| ||||||||||||||||| ||| |||||||||||||||    
T  19897338 ctcatagacaaatgcaaatctacatcatactagcctagaaaatcaaatttcattaaaaaaat-ctcataaaaaatgataaaatagtgtcattttataaca 19897436  T
Q  101 taaaggactaaatcgt--gacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||| ||||||||   |         ||||||||||||||||||||||||| || |||||||||| ||||||  ||||||||||||    
T  19897437 taaaggattaaatcgttaaaaaaaaaaaagataaaggacgaaagtgttacctaagattaagttaaggggctaattatgtaattttgcct 19897525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 4969550 - 4969380
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| || | ||||||||||||||| |||||||||| |||||| ||||||||||| ||| |||||||| |||||    
T  4969550 ctcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcatttaataac 4969452  T
Q  100 ataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggacta 170  Q
    ||||||||||||||||| ||         |||||||||||||||||||||||||||| ||||||| ||||||    
T  4969451 ataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaaggacta 4969380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 40902428 - 40902327
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40902428 ttgttattttataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40902329  T
Q  185 cc 186  Q
    ||    
T  40902328 cc 40902327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 17611547 - 17611424
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||    
T  17611547 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaa 17611448  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  17611447 gggactaattgtgtaattttgcct 17611424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 2026943 - 2027065
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||| ||||||||||||||    
T  2026943 tcataaaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaa 2027042  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    ||||||||||| |||||||||||    
T  2027043 gggactaattgtgtaattttgcc 2027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 17985388 - 17985290
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  17985388 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaatttt 17985290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 7113960 - 7113864
Alignment:
Q  91 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7113960 ttttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 7113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 30002333 - 30002214
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||| ||||||||||||||    
T  30002333 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaa 30002234  T
Q  164 gggactaattgcgtaatttt 183  Q
    ||||||||||| ||||||||    
T  30002233 gggactaattgtgtaatttt 30002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 12115196 - 12115298
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  12115196 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttg 12115295  T
Q  185 cct 187  Q
    |||    
T  12115296 cct 12115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 12139273 - 12139370
Alignment:
Q  90 attttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12139273 attttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 12139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 30563027 - 30563130
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| ||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30563027 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaatcgtgtaatttt 30563126  T
Q  184 gcct 187  Q
    ||||    
T  30563127 gcct 30563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 25780011 - 25779887
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn----gataaaggacgaaagtgttacctaaaataaag 159  Q
    ||||||||||||||||  || |||| |||||||||||||||| |||||||||||||            |||||||||||||||||||| |||||||||||    
T  25780011 tcataaaaaatgataactatgttgttattttataacataaagaactaaatcgtgacaaaaaaaaaaaagataaaggacgaaagtgttatctaaaataaag 25779912  T
Q  160 ttaagggactaattgcgtaattttg 184  Q
    ||||||||||||||| |||||||||    
T  25779911 ttaagggactaattgtgtaattttg 25779887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 19897277 - 19897176
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||| ||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  19897277 ttgttattttttaacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttg 19897178  T
Q  185 cc 186  Q
    ||    
T  19897177 cc 19897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 4969609 - 4969711
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||| ||| ||||| ||||||| |||||||| ||||||||| |||||||||    
T  4969609 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacaaaaatgttatctaaaattaagttaagtgactaattgtgtaattttg 4969708  T
Q  185 cct 187  Q
    |||    
T  4969709 cct 4969711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 376 - 505
Target Start/End: Complemental strand, 28962104 - 28961975
Alignment:
Q  376 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 475  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  28962104 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 28962005  T
Q  476 atttaacatatctaataaacatgtttttta 505  Q
    |||||| || |||||||| ||||| |||||    
T  28962004 atttaaaatgtctaataagcatgtatttta 28961975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 47193936 - 47194003
Alignment:
Q  47 atttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||| |||||||||| ||||| ||||| |||||||||||||||||| |||||||||| ||||||||||    
T  47193936 atttcattgaaaaaat-ctcattaaaaaagataagatattgtcatttaataacataaaagactaaatcg 47194003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 114
Target Start/End: Complemental strand, 30306922 - 30306852
Alignment:
Q  43 tcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatc 114  Q
    ||||||||| |||||||||  ||||| |||||| |||||||||||||||||||||| ||||| |||||||||    
T  30306922 tcaaatttcattgaaaaaaa-ctcattaaaaattataagatattgtcattttataatataaaagactaaatc 30306852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  132 aaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 44066929 - 44066997
Alignment:
Q  43 tcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||||||| ||||||||  ||| ||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  44066929 tcaaatttcattgaaaaa--tcttataaaaattgataagatattgacattttataacataaatgactaaat 44066997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 186
Target Start/End: Complemental strand, 25267323 - 25267181
Alignment:
Q  39 aaaatcaaatttctttgaaaaaattctcat-aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggac 137  Q
    |||| |||||||| |||||||||| ||||| ||||||||||||||||||||||||||| |    ||| ||||||||||| ||        ||||||||||    
T  25267323 aaaaacaaatttcattgaaaaaat-ctcattaaaaaatgataagatattgtcattttaca----aaatgactaaatcgtaac-aaaaaaagataaaggac 25267230  T
Q  138 gaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||||||| || |||||||| |||||   ||||||||||    
T  25267229 gaaagtgttatctaaaattaaattaagggattaattatataattttgcc 25267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 25267441 - 25267499
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||| |||||||||| ||||||| |||||||| |||| |||||||||||||||||    
T  25267441 ataaaggatgaaagtgttatctaaaattaagttaagagactgattgcgtaattttgcct 25267499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 5586545 - 5586486
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  5586545 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 5586486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 26874483 - 26874526
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  26874483 gataaaggactaaactgttacctaaaataaagttaagggactaa 26874526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 29233745 - 29233686
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||| |||||||| ||||||||||||||| ||| |||||  |||||||||||    
T  29233745 gataaaggacgagagtgttacttaaaataaagttaagagaccaattggataattttgcct 29233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 31089937 - 31090000
Alignment:
Q  443 aaatattagactcattaagaaaatttt-acatcaatttaacatatctaataaacatgtttttta 505  Q
    |||||||||||||||||| |||| | | |||||||||||| ||||||||||||||||| |||||    
T  31089937 aaatattagactcattaaaaaaaatgtcacatcaatttaaaatatctaataaacatgtatttta 31090000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 35521463 - 35521522
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  35521463 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 35521522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 45315512 - 45315555
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  45315512 gataaaggactaaattgttacctaaaataaagttaagggactaa 45315555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 9172240 - 9172308
Alignment:
Q  42 atcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaa 112  Q
    |||||||||| || ||||||| ||||||||| |||||||||||||||||||||| ||| |||||| |||||    
T  9172240 atcaaatttcattaaaaaaat-ctcataaaa-atgataagatattgtcattttagaacttaaagggctaaa 9172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 9180222 - 9180290
Alignment:
Q  42 atcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaa 112  Q
    |||||||||| || ||||||| ||||||||| |||||||||||||||||||||| ||| |||||| |||||    
T  9180222 atcaaatttcattaaaaaaat-ctcataaaa-atgataagatattgtcattttagaacttaaagggctaaa 9180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 34480440 - 34480498
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||  | |||||||||||    
T  34480440 gataaaggactaaattgttacttaaaataaagttaagggactaaaagtgtaattttgcc 34480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 49564243 - 49564185
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||    
T  49564243 gataaaggacaaaagtgttacctgaaattaagttaagagacgaattgtgtaattttgcc 49564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 504
Target Start/End: Complemental strand, 31421163 - 31421019
Alignment:
Q  362 agagtatatag--catagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatta 459  Q
    |||||||||||  |||||||| |||   ||||||||||  ||||| | ||||| |||||||||||||  ||||||||||     ||||||||||||| ||    
T  31421163 agagtatatagaacatagtgagttgcaagtaattttatggatttgctgaaggaattagagattactaagtaattatgctaccacaatattagactcaata 31421064  T
Q  460 agaaaattttacatcaatttaacatatctaataaacatgtttttt 504  Q
    | ||| | |  ||||||||||| || |||||||||||||| ||||    
T  31421063 aaaaattgtcccatcaatttaaaatgtctaataaacatgtatttt 31421019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 49564599 - 49564655
Alignment:
Q  131 aaaggacgaaagtgttacctaaaataaagtt-aagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||||||||||| ||||| || |||| ||||| |||||||||||    
T  49564599 aaaggacgaaagtgttacctaaaattaagttaaaaggacaaattgtgtaattttgcc 49564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 5618129 - 5618070
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  5618129 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 5618070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 6489128 - 6489171
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||    
T  6489128 gataaatgactaaactgttacctaaaataaagttaagggactaa 6489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 25012705 - 25012646
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  |  |||||||||||    
T  25012705 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagattaattttgcct 25012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 34480242 - 34480183
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  34480242 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 34480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 4695192 - 4695250
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  4695192 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 4695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 7349828 - 7349770
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||||||||| || |||| |||||||||||||||  | |||||||||||    
T  7349828 gataaaggaccaaagtgttatctgaaattaagttaagggactaaaagtgtaattttgcc 7349770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 8853352 - 8853410
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8853352 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 28554248 - 28554190
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  28554248 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 28554190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 31289312 - 31289254
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  31289312 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 31289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 39672894 - 39672836
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39672894 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39672836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 7e-76; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30904521 - 30904705
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30904521 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 30904620  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30904621 taaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 30904705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 17875953 - 17875771
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||| | ||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17875953 ctcataggcaaatgcaaatcttcatcatacaagtctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 17875854  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17875853 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 17875771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 35482887 - 35482701
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||| || || |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  35482887 ctcataggcaaacgtaaatcttcatcatacacgcatataaaatcgaatttctttgaaaaacatctcataaaaaatgataagatattgtcattttataaca 35482788  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35482787 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 35482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 10682220 - 10682402
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  10682220 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcacaaaaaatgataagatattgtcattttataaca 10682319  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 182  Q
    |||||||||||||||||||          |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  10682320 taaaggactaaatcgtgacaaaaaaaaaaataaaggacgaaagtgtttcctaaaataaagttaagggactaattgtgtaattt 10682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 2968056 - 2967869
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataa-aaaatgataagatattgtcattttataac 99  Q
    ||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  2968056 ctcataggcaaacataaatcttcatcatagaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaaatgataagatattgtcattttataac 2967957  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  2967956 ataaaggactaaatcgtgacaaaaataagataaatgacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcct 2967869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 27912281 - 27912094
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  27912281 ctcataggcaaacgtaaatcttcatcaaacaagcatagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatattgtaattttataaca 27912182  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  27912181 taaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcct 27912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 27958700 - 27958513
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  27958700 ctcataggcaaacgtaaatcttcatcaaacaagcatagaaaatcaaatttctttaaaaaaaatctcataaaaaatgataagatattgtaattttataaca 27958601  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  27958600 taaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttgcct 27958513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 196 - 547
Target Start/End: Complemental strand, 759164 - 758811
Alignment:
Q  196 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 295  Q
    ||||| |||||||| |||||| |||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||||||| ||||||   | |    
T  759164 tgtcatattattttaaaatgtttaatacacatgtactttgacaactcaacataacacatgcatttttccattgttagatcccaccaaagaccaaacatgg 759065  T
Q  296 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 395  Q
    |  ||||| ||| || ||||||||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||  | ||| | | ||| ||||||||||    
T  759064 aattttttaaaggtcggatataaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtatagggaataatcagttgcgggtaatttt 758965  T
Q  396 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 495  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| |  |||||||| |||||| | |||||||||||| ||  ||||||| |    
T  758964 atatatttgtagaaggagtttaagattactagataattatgctacctaaataatccactcattatgaaaatctcacatcaatttaaaatgcctaataagc 758865  T
Q  496 atg--ttttttaaggataatgaacatttattttgttgactcaacatatcacatc 547  Q
    |||  |||||||| |||||| ||||| |||||||| ||||| ||||||||||||    
T  758864 atgttttttttaaagataataaacatgtattttgtcgactcgacatatcacatc 758811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 44379707 - 44379522
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||| ||| ||||||||||||||    
T  44379707 ctcatagacaaacgcaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaa-tctcatacaaaaatgataaaatagtgtcattttataac 44379609  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  44379608 ataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaattttgcc 44379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 3 - 184
Target Start/End: Original strand, 17844045 - 17844224
Alignment:
Q  3 cataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacata 102  Q
    ||||| |||||| ||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  17844045 catagacaaacgcaaatcttcatcatacaagcctataaaatcaaatttcattgaaaaaa-tctcataagaaatgataaaatattgtcattttataacata 17844143  T
Q  103 aaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    || ||||||||||||||         ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17844144 aa-gactaaatcgtgacaaaaaataaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 13327423 - 13327611
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||| | ||||||||||| ||||||||||| |||||||||||  ||||||||| |||||||||||||||||| ||||| |||||||||| ||    
T  13327423 ctcatagacaaatgcaaatcttcatcatacaagcctagcaaatcaaattttattgaaaaaaatctcataaaaaatgataaaatattatcattttatatca 13327522  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa--gttaagggactaattgcgtaattttgcct 187  Q
    ||||||| |||||||||||        |||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  13327523 taaaggattaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaattaattgttaagggactaattgcgtaattttgcct 13327611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 20223290 - 20223098
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||| |    
T  20223290 ctcatagacaaacgtaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaa-tctcataaaaaatgataaaatagtgtcattttataata 20223192  T
Q  101 taaaggactaaatcgtgac-------nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||| ||                ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20223191 taaaggactaaatcgttacaaaaaaaaaaaaaaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 20223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 3691768 - 3691581
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||  ||||||||||| ||| |||||||||||| ||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  3691768 ctcatagacaaacacaaatcttcatcatactagcctagaaaattaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 3691670  T
Q  100 ataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||         |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||    
T  3691669 ataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggactaattgtgtaattttgcct 3691581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30928474 - 30928658
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||   ||||||||| ||| |||||||||||||||    
T  30928474 ctcatagacaaacgcaaatcttcatcataccagcctagaaaatcaaatttcattgaaaaaa-tctcat---aaatgataaaatagtgtcattttataaca 30928569  T
Q  101 taaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||| ||           |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  30928570 taaaggactaaatcgttacaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 23792749 - 23792926
Alignment:
Q  9 caaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataacataaagga 107  Q
    |||||| ||||||||||| ||| |||| ||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||    
T  23792749 caaacgcaaatcttcatcatactagccaagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaataatgtcattttataacataaagga 23792847  T
Q  108 ctaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||        |||||||||| ||||||||||||||||| |||||||||||||||||| || |||||||||    
T  23792848 ctaaatcgttac-aaaaaaagataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgttattttgcct 23792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4128926 - 4128753
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcat-aaaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| || ||||||||||||||||| ||||||||| |||||| |||||||||||| ||| | ||||||||||||    
T  4128926 ctcatagacaaacgcaaatcttcatcatactagtctagaaaatcaaatttcattgaaaaaa-tctcataaaaaaatgataaaatagtttcattttataac 4128828  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    ||||||||||||||||| |         |||||||||||||||||||||||||||| || |||| ||||||||||    
T  4128827 ataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggactaattg 4128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 27523116 - 27523301
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||  |||| |||||| |||||| ||||||||||||||||| |||||||| | |||  ||||| ||||||||||||||||||||||||||    
T  27523116 ctcatagacaaacacaaattttcatcatacaagtctagaaaatcaaatttcattgaaaaact-ctcggaaaaattgataagatattgtcattttataaca 27523214  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||| |||         |||||||| |||||||||| ||||||| ||||||| |||| ||||| ||||||||||||    
T  27523215 taaaggactaaatcgggacaagaaaaatataaaggatgaaagtgttaactaaaattaagttaaaggacgaattgtgtaattttgcct 27523301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 38464809 - 38464641
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||||||||| ||||  |||| ||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38464809 aaatcttcatcatacacacctaaaaaatcatattttattgaaaaaat-ctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 38464711  T
Q  116 tgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
     |||        |||||||||| |||||||||||| || | |||||||||||| | ||| |||||||||||    
T  38464710 ggac-aaaaaaagataaaggacaaaagtgttacctgaatttaagttaagggacgagttgtgtaattttgcc 38464641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 42123862 - 42124051
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||| ||||||| ||| |||||||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  42123862 ctcatagacaaacgcaaaccttcatcatactagcctagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 42123960  T
Q  100 ataaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||           |||||| ||||||||||||||||||||| || |||||  | |||||| ||||||||||||    
T  42123961 ataaaggactaaatcgttacaaaaaaaaaaagataaatgacgaaagtgttacctaaaattaaattaagaaattaattgtgtaattttgcct 42124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 2968093 - 2968216
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  2968093 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 2968192  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  2968193 gggactaattgtgtaattttgcct 2968216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 17875993 - 17876116
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  17875993 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 17876092  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  17876093 gggactaattgtgtaattttgcct 17876116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 35482925 - 35483048
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||    
T  35482925 tcataaaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 35483024  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  35483025 gggactaattgtgtaattttgcct 35483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 27912342 - 27912444
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27912342 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 27912441  T
Q  185 cct 187  Q
    |||    
T  27912442 cct 27912444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 27958761 - 27958863
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27958761 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 27958860  T
Q  185 cct 187  Q
    |||    
T  27958861 cct 27958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7899945 - 7899830
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaa-tgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||| ||||| ||| |||||||||||||||||||  |||||||||| ||||||||||| |||||| ||| ||||||||||||||    
T  7899945 ctcatagacaaacgcaaatcgtcatcatactagcctagaaaatcaaattttattgaaaaaat-ctcataaaaaaatgataaaatagtgtcattttataac 7899847  T
Q  100 ataaaggactaaatcgt 116  Q
    |||||||||||||||||    
T  7899846 ataaaggactaaatcgt 7899830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 30904483 - 30904360
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||    
T  30904483 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 30904384  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    |||| |||||| ||||||||||||    
T  30904383 gggattaattgtgtaattttgcct 30904360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 10682182 - 10682060
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  10682182 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgactaaaaaa-gataaagaacgaaagtgttacctaaaataaagttaa 10682084  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    |||| |||||| ||||||||||||    
T  10682083 gggattaattgtgtaattttgcct 10682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 14577087 - 14577212
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtt 161  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  14577087 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagtt 14577186  T
Q  162 aagggactaattgcgtaattttgcct 187  Q
    ||||||||||||| ||||||||||||    
T  14577187 aagggactaattgtgtaattttgcct 14577212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 3691830 - 3691932
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||| |||||| |||||| |||||||||    
T  3691830 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagtgaagggattaattgtgtaattttg 3691929  T
Q  185 cct 187  Q
    |||    
T  3691930 cct 3691932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 20178428 - 20178370
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20178428 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 20178370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 38464887 - 38464982
Alignment:
Q  90 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||| |||||||||| |||        |||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||    
T  38464887 attttataacataaaagactaaatcgggacaaaaaaaagataaaggacgaaagtgttacctaaaataaag-taagggatgaattgtgtaattttgcc 38464982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 13327319 - 13327262
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  13327319 ataaaggatgaaagtgttacctaaaattaagttaaggaactaattgtgtaattttgcc 13327262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 374 - 505
Target Start/End: Complemental strand, 14715041 - 14714909
Alignment:
Q  374 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatt-aagaaaattttaca 472  Q
    ||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||| || ||||| | |||    
T  14715041 atagtgaattgagggtaattttatagatttgttgaaggtgttggagattacttggtaattatgtcaccaaactattagattcattaaaaaaaatgtcaca 14714942  T
Q  473 tcaatttaacatatctaataaacatgtttttta 505  Q
    ||||||||| || |||||||| ||||| |||||    
T  14714941 tcaatttaaaatgtctaataagcatgtatttta 14714909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 44379771 - 44379859
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaatt 173  Q
    |||| ||||||||||||||||||||||||||| ||        ||||||| |||||| ||||||||||||| ||||||||| |||||||    
T  44379771 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaaggaactaatt 44379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 30928370 - 30928315
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||    
T  30928370 ataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttg 30928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 31231317 - 31231360
Alignment:
Q  70 aaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  31231317 aaaaatgataagatattgttattttataacataaaggactaaat 31231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 20223394 - 20223452
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  20223394 gataaagaacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 20223452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 21660983 - 21661041
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| |||  |||||||||||||||||||||||||||| || |||||||||||    
T  21660983 gataaaggactaaaccgttacctaaaataaagttaagggactaaatgtgtaattttgcc 21661041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 30253882 - 30253940
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||||    
T  30253882 gataaaggactaaactgttacctaaaataaagttaagggactaaaagtgtaattttgcc 30253940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 42123802 - 42123703
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||| ||||| ||        ||||||||| |||| | ||| ||||||| |||||||||||||||||| |||||||||    
T  42123802 ttgttattttataacataaaggactatatcgt-acaaaaaaaagataaaggatgaaaatattatctaaaattaagttaagggactaattgtgtaattttg 42123704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 30463972 - 30463929
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  30463972 gataaaggactaaactgttacctaaaataaagttaagggactaa 30463929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 34213443 - 34213400
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  34213443 gataaaggaccaaactgttacctaaaataaagttaagggactaa 34213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 28828472 - 28828530
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | |||||||||||    
T  28828472 gataaaggactaaattattacctaaaataaagttaagggactaaaagtgtaattttgcc 28828530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 9734660 - 9734600
Alignment:
Q  43 tcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    ||||||||| |||||||||| |||||||||| | | || |||||||||||||||||||||||    
T  9734660 tcaaatttcattgaaaaaat-ctcataaaaagttaaaaaatattgtcattttataacataaa 9734600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 13795572 - 13795516
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||| ||||||| ||||| ||||||| |||||||||||| ||||| |||||||||    
T  13795572 gataaatgacgaaaatgttagctaaaattaagttaagggacgaattgtgtaattttg 13795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14577050 - 14577010
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaa 41  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  14577050 ctcataggcaaacgcaaatcttcatcatacaagcctagaaa 14577010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 37727257 - 37727201
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||  | |||||||||    
T  37727257 gataaaggactaaactgttacctgaaataaagttaagggactaaaagtgtaattttg 37727201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 148351 - 148292
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||  | ||||||||||||    
T  148351 gataaaggaccaaattgttacctaaaattaagttaagggaccaaaagtgtaattttgcct 148292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 21660784 - 21660725
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21660784 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21660725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 26938441 - 26938496
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||    
T  26938441 ataaaggactaaattgttacctaaaattaagttaagggactaaaagtgtaattttg 26938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 27712822 - 27712779
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  27712822 gataaaggactaaactgttacctaaaataaaattaagggactaa 27712779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 33279194 - 33279253
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  33279194 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 33279253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 34632283 - 34632244
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaaggga 167  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  34632283 gataaaggactaaattgttacctaaaataaagttaaggga 34632244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 10925358 - 10925416
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||  ||| || ||||||||||||||||||||||||||  | |||||||||||    
T  10925358 gataaaggattaaattgatacctaaaataaagttaagggactaaaagtgtaattttgcc 10925416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 27713020 - 27713078
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  27713020 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 27713078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 34199091 - 34199149
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| |  | |||||||||||    
T  34199091 gataaaggaccaaactgttacctaaaattaagttaagggactgaaagtgtaattttgcc 34199149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 29596460 - 29596403
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  29596460 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 29596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 39198671 - 39198614
Alignment:
Q  130 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  39198671 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 39198614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 7e-76; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 9319965 - 9320149
Alignment:
Q  3 cataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacata 102  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9319965 cataggcaaacgtaaatcttcatcatacaagtctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacata 9320064  T
Q  103 aaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9320065 aaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 9320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 20364131 - 20364316
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20364131 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 20364230  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20364231 taaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttgcc 20364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 5 - 187
Target Start/End: Complemental strand, 17846189 - 17846007
Alignment:
Q  5 taggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17846189 taggcaaacgtaaatcttcatcatacaagtctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacataaa 17846090  T
Q  105 ggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  17846089 ggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18916810 - 18916624
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18916810 ctcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 18916711  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18916710 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 18916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 10044929 - 10044745
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10044929 tcataggcaaacgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacat 10044830  T
Q  102 aaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10044829 aaatgactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 10044745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 44536344 - 44536527
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaat-tctcataaaaaatgataagatattgtcattttataac 99  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  44536344 ctcataggcaaatgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaaatctcataaaaaatgataagatattgtcattttataac 44536443  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  44536444 ataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 44536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 2318677 - 2318505
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2318677 ctcataggcaaacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 2318578  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  2318577 taaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagggactaattg 2318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 10108999 - 10108813
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10108999 ctcataggcaaacgcaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 10108900  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||| ||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10108899 taaatgactaaatcgtgacaaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 10108813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 4261337 - 4261156
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4261337 ctcataggcaa-cgcaaatcttcatcatacaagcctagaaaatctaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 4261239  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||||| ||        ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4261238 taaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatttt 4261156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 27360306 - 27360118
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  27360306 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcttaaaaaatgataagatattgtcatttaataaca 27360207  T
Q  101 taaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||| |||||           ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  27360206 taaaggactaaattgtgacaaaaaaaaaatataaaggacgaaaatattacctaaaataaagttaagggactaattgtgtaattttgcct 27360118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 601514 - 601327
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||| ||||||||||||| || |||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  601514 ctcataggcaaatgtaaatcttcatcataaaagtatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttatatta 601415  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagtt-aagggactaattgcgtaattttgcc 186  Q
    |||| ||||||||||||||         |||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||||    
T  601414 taaaagactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaagagattaattgtgtaattttgcc 601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 30337609 - 30337424
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| |  | ||||||||||||||| |||||||| |||||||| ||||||||||| ||| ||||||||||||||    
T  30337609 ctcatagacaaacgcaaatcttcatcatactattcaagaaaatcaaatttcattgaaaaa-ttctcatacaaaaatgataaaatagtgtcattttataac 30337511  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||    
T  30337510 ataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 67 - 187
Target Start/End: Original strand, 8322411 - 8322529
Alignment:
Q  67 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggg 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||| ||||||||||    
T  8322411 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga--aaaaaaagataaaggacgaaaatgttacctaaaattaagttaaggg 8322508  T
Q  167 actaattgcgtaattttgcct 187  Q
    || ||||  ||||||||||||    
T  8322509 acgaattctgtaattttgcct 8322529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 27360345 - 27360468
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||    
T  27360345 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 27360444  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  27360445 gggactaattgtgtaattttgcct 27360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 9319924 - 9319804
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  9319924 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 9319825  T
Q  164 gggactaattgcgtaattttg 184  Q
    ||||||||||| ||| |||||    
T  9319824 gggactaattgtgtagttttg 9319804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 17846231 - 17846354
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  17846231 tcataaaaaaggataactatgttgttattttataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 17846330  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    |||||||||||  |||||||||||    
T  17846331 gggactaattgtataattttgcct 17846354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 18916848 - 18916971
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  18916848 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaa 18916947  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||  ||||||||||||    
T  18916948 gggactaattatgtaattttgcct 18916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 20364092 - 20363970
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||| ||||    
T  20364092 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaa 20363993  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    ||||||||||| |||||||||||    
T  20363992 gggactaattgtgtaattttgcc 20363970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 2318735 - 2318836
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2318735 ttgttattttataacataaaagactaaatcgtgacaaaagaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2318833  T
Q  185 cct 187  Q
    |||    
T  2318834 cct 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 10109038 - 10109160
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagtta 162  Q
    |||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||    
T  10109038 tcataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaatataaaggacgaaagtgttaactaaaataaagtta 10109137  T
Q  163 agggactaattgcgtaattttgc 185  Q
    ||||||||| |||||||||||||    
T  10109138 agggactaagtgcgtaattttgc 10109160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 4261376 - 4261502
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagt 160  Q
    ||||||||||||||||  || |||| ||||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  4261376 tcataaaaaatgataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagt 4261475  T
Q  161 taagggactaattgcgtaattttgcct 187  Q
    ||| |||||||||| ||||||||||||    
T  4261476 taacggactaattgtgtaattttgcct 4261502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 5547241 - 5547347
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcat-aaaaaatgataagatattgtcattttataaca 100  Q
    |||||| |||||  ||||||||||| ||| |||||||||||| ||||||| ||||||||| |||||| |||||||||||| ||| |||||||||||||||    
T  5547241 tcatagacaaacacaaatcttcatcatactagcctagaaaattaaatttcattgaaaaaa-tctcataaaaaaatgataaaataatgtcattttataaca 5547339  T
Q  101 taaaggac 108  Q
    ||||||||    
T  5547340 taaaggac 5547347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 601620 - 601679
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  601620 gataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 601679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 13862621 - 13862496
Alignment:
Q  57 aaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaata 156  Q
    ||||| |||||| |||||||| || |||||||||||||||||||||||||||||| ||| |||        |||||||||||||||| |||| ||||||     
T  13862621 aaaaaatctcattaaaaatgaaaaaatattgtcattttataacataaaggactaattcgagac-aaaaaaagataaaggacgaaagtattacttaaaatt 13862523  T
Q  157 aagttaagggactaattgcgtaatttt 183  Q
    ||||||| |||| ||||| ||||||||    
T  13862522 aagttaaaggacgaattgtgtaatttt 13862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 31769961 - 31770057
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||||||||| |||||| | ||||| ||||||||| |||||||| | ||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  31769961 aaatcttcatcatacaagtcaagaaactcaaatttcattgaaaaagt-ctcattaaaaatgataaaatattgtcattttaaaacatagaggactaaat 31770057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 5547339 - 5547393
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5547339 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 5547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 10045035 - 10045092
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10045035 gataaaggacgaaagtgttaactaaaa-aaagttaagggactaattgcgtaattttgcc 10045092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 43520347 - 43520439
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggac 108  Q
    |||| |||||| ||||| |  ||||||| | ||||  ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  43520347 aaattttcatcatacaaactaagaaaataagattttattgaaaaaaatctcattaaaattgataagatattgtcattttataacataaaggac 43520439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 40044477 - 40044556
Alignment:
Q  18 atcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaat-tctcataaaaaatgataagatattgtcattttat 96  Q
    ||||||||| ||||| || ||||||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||    
T  40044477 atcttcatcatacaaacccagaaaatcaaatttcattaaaaaaaaatctcataaaaaataataagatattgtcattttat 40044556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 37084734 - 37084688
Alignment:
Q  69 aaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37084734 aaaaaatgataagatattgtcattttataacataaatgactaaatcg 37084688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 18178377 - 18178434
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  18178377 ataaaggacgaaagtattacctaatataaagttaaaggactaattgtgtaattttgcc 18178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 619 - 664
Target Start/End: Complemental strand, 20117767 - 20117722
Alignment:
Q  619 atttagcactcaataagaattattccaaactttggcacttcttatc 664  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20117767 atttagcactcaataagaaatattccaaactttggcacttcttatc 20117722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 37084819 - 37084743
Alignment:
Q  10 aaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatatt 86  Q
    |||| |||||||||||| ||||| |||| ||||||| ||||| ||||||||| ||| |||| |||||||||||||||    
T  37084819 aaacctaaatcttcatcatacaaacctaaaaaatcagatttcattgaaaaaaatctaataacaaatgataagatatt 37084743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 9991976 - 9991921
Alignment:
Q  58 aaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    |||| |||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  9991976 aaaaatctcataaaaaatgataaaatattgtcattttagaatataaaggactaaat 9991921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 44536237 - 44536178
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| | ||| ||||||    
T  44536237 gataaaggacggaagtgttacctaaaataaagttaaaggactaattgtgcaatattgcct 44536178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 31769839 - 31769781
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  31769839 ataaaggactaaagtattacctaaaattaagttaagagacgaattgcgtaattttgcct 31769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 41385734 - 41385817
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    ||||||||||| |||||| |||  || ||| ||||| ||  ||||||||||||||||||||||||||||||  |||||||||||||    
T  41385734 aaatcttcatcatacaagtctactaactcatatttcatt--aaaaattctcataaaaaatgataagatattaacattttataacat 41385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 10520907 - 10520866
Alignment:
Q  72 aaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  10520907 aaatgataagatattgtcattttataatataaaggactaaat 10520866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 8236858 - 8236929
Alignment:
Q  16 aaatcttcatcgtacaagcctag-aaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattg 87  Q
    ||||||||||| |||||  |||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  8236858 aaatcttcatcatacaaatctaggaaaatcatatttcattgaaaaaat-ctcataaaaaatgataagatattg 8236929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 30337716 - 30337775
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||| | ||||| ||||||| |||||||||||||||||  ||||||||||||    
T  30337716 gataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcct 30337775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 10714066 - 10714008
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | |||||||||||    
T  10714066 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcc 10714008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 33274653 - 33274710
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||    
T  33274653 gataaaggaccaaattgttacctaaaattaagttaagggactaaaagtgtaattttgc 33274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 393 - 505
Target Start/End: Original strand, 3395029 - 3395141
Alignment:
Q  393 tttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaata 492  Q
    ||||| |||||||| ||||| ||  | |||| | ||||||||||||    ||||| |||| ||||||| ||||| | |||||||||||| || |||||||    
T  3395029 tttatgaatttgttgaaggaattgaaaattattggataattatgctaccaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaata 3395128  T
Q  493 aacatgtttttta 505  Q
    ||||||| |||||    
T  3395129 aacatgtatttta 3395141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 1650759 - 1650818
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1650759 gataaaggacaaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1650818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 11723763 - 11723720
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||    
T  11723763 gataaaggaccaaactgttacctgaaataaagttaagggactaa 11723720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 30488336 - 30488395
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  30488336 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 30488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 40710374 - 40710315
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| |||| | |||||| |||| |||||||||||| ||||| ||||||||||||    
T  40710374 gataaaggatgaaaatattacctgaaattaagttaagggacgaattgtgtaattttgcct 40710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 981822 - 981780
Alignment:
Q  145 ttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  981822 ttacctaaaattaagttaagggacaaattgtgtaattttgcct 981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 5547145 - 5547103
Alignment:
Q  143 tgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||    
T  5547145 tgttatctaaaattaagttaagggactaattgtgtaattttgc 5547103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 26499479 - 26499421
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  26499479 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 26499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 26499667 - 26499725
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  26499667 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 26499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 35412133 - 35412191
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  35412133 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 35412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 44769387 - 44769421
Alignment:
Q  70 aaaaatgataagatattgtcattttataacataaa 104  Q
    ||||||||||||| |||||||||||||||||||||    
T  44769387 aaaaatgataagaaattgtcattttataacataaa 44769421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 2450146 - 2450109
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagg 165  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  2450146 gataaaggactaaactgttacctaaaataaagttaagg 2450109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 28789123 - 28789180
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  28789123 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 28789180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 1e-74; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3218302 - 3218487
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  3218302 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcat-aaaaatgataagatattgtcattttataaca 3218400  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3218401 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 3218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 33595504 - 33595320
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33595504 ctcataggcaaacataaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 33595405  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    |||||||||||||||||||        ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  33595404 taaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgc 33595320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 4243108 - 4242922
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4243108 ctcataggcaaacgtaaatcttcatcatacaaatctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 4243009  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  4243008 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaaggactaattgtgtaattttgcct 4242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 3922699 - 3922884
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||||||||| |||||| |||| || || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  3922699 ctcataggcaaacgtaaattttcatcatacacgcatataaaatcaaatttctttgaaaaacatctcataaaaaatgataagatattgtcattttataaca 3922798  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3922799 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 3922884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 14763496 - 14763319
Alignment:
Q  8 gcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaagga 107  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14763496 gcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacataaagga 14763397  T
Q  108 ctaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    ||||| ||||||        ||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  14763396 ctaaaccgtgacaaaaaaaagataaagtacgaaagtgttacctaaaataaagttaagggactgattgtataattttgc 14763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 23068858 - 23069042
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||| ||||||||||||||||| |||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23068858 ctcataggaaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 23068957  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||| ||||||||||||||        |||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  23068958 taaa-gactaaatcgtgac-aaaaaaagataaatgacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcct 23069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 6755102 - 6754946
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6755102 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 6755003  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa 158  Q
    |||||||||||||||||||        |||||||||| ||||| ||||||||||||||    
T  6755002 taaaggactaaatcgtgac-aaaaaaagataaaggacaaaagtattacctaaaataaa 6754946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 10810145 - 10810322
Alignment:
Q  9 caaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggac 108  Q
    |||||| ||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||||||||| |||||| |||    
T  10810145 caaacgcaaatctttatcgtacaaccctagaaaatcaaatttcattgaaaaaa-tctcataaaaaataataaaatattgtcattttatatcataaaagac 10810243  T
Q  109 taaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||  ||||        |||||||||| | ||||||||||||||| || |||| |||||||||| ||||||||||||    
T  10810244 taaataatgacaaaaaaaagataaaggacaagagtgttacctaaaattaaattaaaggactaattgtgtaattttgcct 10810322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 23068818 - 23068695
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  23068818 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 23068719  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  23068718 gggactaattgtgtaattttgcct 23068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 33595543 - 33595666
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  33595543 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 33595642  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  33595643 gggactaattgtgtaattttgcct 33595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 4243146 - 4243269
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||    
T  4243146 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaa 4243245  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  4243246 gggactaattgtgtaattttgcct 4243269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 6755140 - 6755262
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||    
T  6755140 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaa 6755239  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    ||||||||||| |||||||||||    
T  6755240 gggactaattgtgtaattttgcc 6755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 3218273 - 3218152
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  3218273 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaa 3218174  T
Q  164 gggactaattgcgtaattttgc 185  Q
    ||||||||||| ||||||||||    
T  3218173 gggactaattgtgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 3922634 - 3922538
Alignment:
Q  91 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3922634 ttttataacataaaggactaattcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 3922538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 14763550 - 14763654
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 182  Q
    |||| ||||||||||| ||||||||||||||||||          |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  14763550 ttgttattttataacaaaaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtcttacctaaaataaagttaagggactaattgtgtaattt 14763649  T
Q  183 tgcct 187  Q
    |||||    
T  14763650 tgcct 14763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 20491668 - 20491766
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    |||| |||||| ||||| || ||||  ||| |||||  |||||||| |||||| |||| |||||||||||||||||||||||||||||| || |||||||    
T  20491668 aaattttcatcatacaaaccaagaacctcatatttcactgaaaaaaatctcattaaaa-tgataagatattgtcattttataacataaatgattaaatcg 20491766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 14655134 - 14655078
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||    
T  14655134 gataaaggaccaaactgttacctaaaataaagttaagggactaaaagtgtaattttg 14655078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 28852246 - 28852188
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  28852246 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 28852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 423 - 499
Target Start/End: Original strand, 15633800 - 15633876
Alignment:
Q  423 actagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgt 499  Q
    ||||| |||||||||| || |||||||||||||||||| ||||  | ||||||| |||| || ||||||||| ||||    
T  15633800 actaggtaattatgctattaaaatattagactcattaaaaaaaggtcacatcaaattaaaatgtctaataaagatgt 15633876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 2316745 - 2316804
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  2316745 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 2316804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 9899253 - 9899194
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899253 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 9899451 - 9899510
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899451 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 11000042 - 11000096
Alignment:
Q  56 aaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaa 111  Q
    |||||| |||||||||| |||||||||||||| |||||||||| |||||| |||||    
T  11000042 aaaaaaatctcataaaa-atgataagatattgccattttataatataaagaactaa 11000096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 13178479 - 13178522
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  13178479 gataaaggaccaaaatgttacctaaaattaagttaagggactaa 13178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 22569019 - 22569062
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  22569019 gataaaggaccaaactgttacctaaaattaagttaagggactaa 22569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 24896429 - 24896488
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||| ||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  24896429 gataaatgactaaactgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 24896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 30121584 - 30121639
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||||||||||||||||| || |||| |||| || || ||||||||    
T  30121584 gataaaggacgaaagtgttacctaaaattaatttaaaggacgaaatgtgtaatttt 30121639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 32557393 - 32557436
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  32557393 gataaaggaccaaattgttacctaaaattaagttaagggactaa 32557436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 1925408 - 1925466
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1925408 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1925466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 7808847 - 7808923
Alignment:
Q  35 ctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||||||| | | ||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||| || |||||    
T  7808847 ctagaaaattataattcattgaaaaaat-ctcataaaaaatgataaaatattatcatttt-taacataaatgattaaat 7808923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 10026198 - 10026140
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  10026198 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 10027124 - 10027182
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||| ||||||||||||| |||||||||||||| ||  |||||| |||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcct 10027182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 21926121 - 21926063
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21926121 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21926063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 24176156 - 24176096
Alignment:
Q  227 tgtactttgtgaactcaacataacacatgt--attttttcattgttagatcccaccaagga 285  Q
    |||||||||| ||||||||||||||||| |   |||||||||||  |||||||||||||||    
T  24176156 tgtactttgttaactcaacataacacattttatttttttcattgacagatcccaccaagga 24176096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 4e-74; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 32523386 - 32523213
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32523386 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 32523287  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  32523286 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 32523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 32178040 - 32177854
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32178040 ctcataggcaaacgtaaatcttcatcatacaaacctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 32177941  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  32177940 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttgcct 32177854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 8437465 - 8437652
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8437465 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattggcattttataaca 8437564  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8437565 taaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcct 8437652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 19305904 - 19306090
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19305904 ctcataggcaaacataaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 19306003  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||    
T  19306004 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttaactaaaataaagttaagggactaattgtgctattttgcct 19306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 49114046 - 49113861
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49114046 ctcataggcaa-cgtaaatcttcatcatacaagcctggaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 49113948  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||| ||        |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  49113947 taaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttgcct 49113861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 37453234 - 37453410
Alignment:
Q  8 gcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaagga 107  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  37453234 gcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatttcataaaaaatgataagatattgtcattttataacataaagga 37453333  T
Q  108 ctaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    ||||| ||||||        |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37453334 ctaaaccgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactgattgtgtaattttg 37453410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28408427 - 28408244
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28408427 ctcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 28408328  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  28408327 taaaggactaaatcatgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggggctaattgtgtaattttg 28408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 7417697 - 7417511
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  7417697 ctcataggcaaacgcaaatcttcatcatacaagtctagaaaatcaaatttctttaaaaaaaatctcatacaaaatgataagatattgtcattttataaca 7417598  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  7417597 taaaggactaaatcgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtgtaattttgcc 7417511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 45746884 - 45747070
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttg-aaaaaattctcataaaaaatgataagatattgtcattttataac 99  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  45746884 ctcataggcaaacgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaaatctcataaaaaatgataagatattgtcattttataac 45746983  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||| ||||||||||||||        ||||||||||||||||||||||||||||||| |||||  ||||||||  |||||||||||    
T  45746984 ataaa-gactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagaaactaattgtataattttgcct 45747070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 2933444 - 2933615
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    |||| |||||| ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2933444 aaattttcatcatacaagcatagaaaatcaaatttctttgaaaagaatctcataaaaaatgataagatattttcattttataacataaaggactaaatcg 2933543  T
Q  116 tgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||         ||||||||||||||||||||||||||||||||||||| |||||||| |  |||||||||    
T  2933544 tgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggaactaattgtgctattttgcct 2933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 32832420 - 32832246
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaat-tctcataaaaaatgataagatattgtcattttataac 99  Q
    |||| ||| |||||||||| |||||| ||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  32832420 ctcacaggtaaacgtaaattttcatcatacaagcatagaaaatcaaatttctttgaaaaaaaatctcataaaaaatgataagatattgtcattttataac 32832321  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    |||||||||||||| |||||        |||||| ||  |||||||||||||||||||| |||||||||||||||    
T  32832320 ataaaggactaaattgtgacaaaaaaaagataaaagataaaagtgttacctaaaataaaattaagggactaattg 32832246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 1511347 - 1511533
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcat--aaaaaatgataagatattgtcattttataa 98  Q
    ||||||| |||||||||||||||||| ||| | |||||||||||||||||| ||||||||| ||||||  |||||||||||| ||| |||||||||||||    
T  1511347 ctcatagacaaacgtaaatcttcatcatactaacctagaaaatcaaatttcattgaaaaaa-tctcataaaaaaaatgataaaatagtgtcattttataa 1511445  T
Q  99 cataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||| ||        |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  1511446 cataaaggactaaatcgttac-aaaaaaagataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcct 1511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 44307802 - 44307610
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||| |    
T  44307802 ctcatagacaaacgtaaatcttcatcatactagcctagaaaatcaaatttcattgaaaaaa-tctcataaaaaatgataaaatagtgtcattttataata 44307704  T
Q  101 taaaggactaaatcgtgac-------nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||| ||                ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  44307703 taaaggactaaatcgttacaaaaaaaaaaaaaaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 44307610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 10878811 - 10878624
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaa-tgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||| ||||| ||| |||||||||| ||||||||| |||||||||| ||||||||||| |||||| ||| ||||||||||||||    
T  10878811 ctcatagacaaacgcaaatcgtcatcatactagcctagaaa-tcaaatttcattgaaaaaat-ctcataaaaaaatgataaaatagtgtcattttataac 10878714  T
Q  100 ataaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||          |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  10878713 ataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 10878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 31894440 - 31894257
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcat-aaaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| || | | ||||| ||||||| ||||||||  |||||| |||||||||||| ||| ||||||||||||||    
T  31894440 ctcatagacaaacgcaaatcttcatcatactagtcaataaaattaaatttcattgaaaaa--tctcattaaaaaatgataaaatagtgtcattttataac 31894343  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||         ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  31894342 ataaaggactaaatcgttacaaaaaaa--ataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29226454 - 29226337
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||| ||||||||||  |||||   |||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||    
T  29226454 ctcatagacaaacgcaaatcttcattatacaattttagaaaatcaaatttcattgaaaaaaa-ctcataaaaaatgataagatattatcattttataaca 29226356  T
Q  101 taaaggactaaatcgtgac 119  Q
    |||||||||||||||||||    
T  29226355 taaaggactaaatcgtgac 29226337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 32523426 - 32523546
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  32523426 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaa 32523525  T
Q  164 gggactaattgcgtaattttg 184  Q
    ||||||||||| |||||||||    
T  32523526 gggactaattgtgtaattttg 32523546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 28408465 - 28408587
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  28408465 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaa 28408563  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  28408564 gggactaattgtgtaattttgcct 28408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 8437427 - 8437304
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||| ||||        ||||||||||||||||||||| ||||||||||||||    
T  8437427 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaa 8437328  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  8437327 gggactaattgtgtaattttgcct 8437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 183
Target Start/End: Original strand, 32178078 - 32178197
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||    
T  32178078 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaa 32178177  T
Q  164 gggactaattgcgtaatttt 183  Q
    ||||||||||| ||||||||    
T  32178178 gggactaattgtgtaatttt 32178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 7417736 - 7417858
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  7417736 tcataaaaaaggataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaa 7417834  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  7417835 gggactaattgtgtaattttgcct 7417858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 82 - 183
Target Start/End: Original strand, 32832475 - 32832576
Alignment:
Q  82 atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatt 181  Q
    ||||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  32832475 atattgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatt 32832574  T
Q  182 tt 183  Q
    ||    
T  32832575 tt 32832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 2933387 - 2933289
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||| |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2933387 ttgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 2933289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 49114085 - 49114209
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagtta 162  Q
    |||||||||| |||||  || |||| ||||||||||| | ||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  49114085 tcataaaaaaggataactatgttgttattttataacacagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagtta 49114184  T
Q  163 agggactaattgcgtaattttgcct 187  Q
    |||||||||||| ||||||||||||    
T  49114185 agggactaattgtgtaattttgcct 49114209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 19305798 - 19305739
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19305798 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 19305739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30060564 - 30060675
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||| ||||||  ||||||||||| ||||| |  ||||||||  ||||| |||||||||| ||| ||||||||||||| |||||||||||| ||||||    
T  30060564 ctcataagcaaacccaaatcttcatcatacaaacaaagaaaatccgatttcattgaaaaaat-ctcttaaaaaatgataaaatattgtcatttcataaca 30060662  T
Q  101 taaaggactaaat 113  Q
    |||||||||||||    
T  30060663 taaaggactaaat 30060675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 24986819 - 24986719
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||| |||||||||  |||||||||    
T  24986819 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaaattaaaggactaatt--gtaattttg 24986722  T
Q  185 cct 187  Q
    |||    
T  24986721 cct 24986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 31894500 - 31894601
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  31894500 ttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttg 31894598  T
Q  185 cct 187  Q
    |||    
T  31894599 cct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 1511290 - 1511190
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||    
T  1511290 ttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttg 1511192  T
Q  185 cc 186  Q
    ||    
T  1511191 cc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 30154709 - 30154627
Alignment:
Q  17 aatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||| |||| ||| ||| ||||| ||||||||||| ||||||||||||||||||||||  ||||||| ||||    
T  30154709 aatcttcatcgtacaaacctaaaaactcatatttcattgaaaaaatt-tcataaaaaatgataagatattaacattttagaaca 30154627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 27612271 - 27612329
Alignment:
Q  57 aaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  27612271 aaaaaatctcattaaaaatgataagatattgtcattttataacatataagactaaatcg 27612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 45746846 - 45746739
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| |||| |||||||||||         |||||||| |||||||||||||||||||||| |||    
T  45746846 tcataaaaaaggataactatgttgttattttataacatagaggattaaatcgtgacaaaaaataaataaaggaagaaagtgttacctaaaataaaggtaa 45746747  T
Q  164 gggactaa 171  Q
    ||||||||    
T  45746746 gggactaa 45746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 44307906 - 44307964
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  44307906 gataaagaacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 44307964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 7172989 - 7172930
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  7172989 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 7172930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 437
Target Start/End: Original strand, 4119569 - 4119619
Alignment:
Q  387 ggtaattttataaatttgttaaaggagttagagattactagataattatgc 437  Q
    |||||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  4119569 ggtaattttataaatttgttgaagcagttggagattactaggtaattatgc 4119619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 505
Target Start/End: Complemental strand, 24708945 - 24708831
Alignment:
Q  389 taattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatct 488  Q
    |||||||||  ||||||| |||||||| ||  ||| | ||||||||||||    ||||||||||||| |||| ||||| | |||||||||||| || |||    
T  24708945 taattttatggatttgttgaaggagttgga--ttattggataattatgctaccaaaatattagactctttaaaaaaatgtcacatcaatttaaaatgtct 24708848  T
Q  489 aataaacatgtttttta 505  Q
    ||||| ||||| |||||    
T  24708847 aataagcatgtatttta 24708831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 37452511 - 37452478
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagtt 161  Q
    ||||||||||||||||||||||||||||||||||    
T  37452511 gataaaggacgaaagtgttacctaaaataaagtt 37452478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 8869640 - 8869584
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||  ||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  8869640 gataaaggaataaaatgttacctaaaattaagttaagggacgaattgtgtaattttg 8869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 8522382 - 8522323
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8522382 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 10543667 - 10543710
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||  ||| |||||||||||||||||||||||||||||    
T  10543667 gataaaggatcaaactgttacctaaaataaagttaagggactaa 10543710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 34287773 - 34287816
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||||| |||||||||||| |||| |||||||||||||||    
T  34287773 gataaaggaccaaagtgttacctgaaattaagttaagggactaa 34287816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 38495170 - 38495229
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  38495170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 38495229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 41922340 - 41922281
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  41922340 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 41922281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 43575306 - 43575365
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  43575306 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 43575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 45055380 - 45055321
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055380 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 45055578 - 45055637
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055578 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 10878921 - 10878975
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||||||||||||| | ||| ||||||| ||||||||| |||||||| ||||||||    
T  10878921 ataaaggacgaaaatattagctaaaattaagttaaggtactaattgtgtaatttt 10878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 12423903 - 12423845
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  12423903 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 12423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 21733126 - 21733068
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||| ||| ||| |||||||| |||| |||||||||||||||| | |||||||||||    
T  21733126 gataaaagaccaaactgttacctgaaattaagttaagggactaatagtgtaattttgcc 21733068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 31283409 - 31283467
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||| |||||| |||||||||||||||  | |||||||||||    
T  31283409 gataaaggaccaaactgttacataaaattaagttaagggactaaaagtgtaattttgcc 31283467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 37453179 - 37453145
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgac 119  Q
    |||| ||||||||||||||||||||||||||||||    
T  37453179 ttgttattttataacataaaggactaaatcgtgac 37453145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 42391354 - 42391296
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  42391354 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 42391296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 44458040 - 44458098
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44458040 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44458098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 43161650 - 43161703
Alignment:
Q  133 aggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||| ||| || |||| |||||||||||| ||||| |||||||||||    
T  43161650 aggacgaaagtattagctgaaattaagttaagggacaaattgtgtaattttgcc 43161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 4e-74; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 33692447 - 33692262
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33692447 ctcataggcaaatgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 33692348  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33692347 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 33692262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 50161277 - 50161460
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50161277 ctcataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 50161376  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50161377 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 50161460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 23163440 - 23163626
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23163440 ctcataggcaaacgtaaatcttcattatacaagcatataaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 23163539  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23163540 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 23163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 48419377 - 48419563
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48419377 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttttttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 48419476  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||    
T  48419477 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttgcct 48419563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 28458682 - 28458867
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28458682 ctcataggcaaacgcaaatcttcaacatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 28458781  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  28458782 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttgcc 28458867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 5 - 187
Target Start/End: Original strand, 21053460 - 21053642
Alignment:
Q  5 taggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  21053460 taggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataatataaa 21053559  T
Q  105 ggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||| ||        ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21053560 ggactaaatcgtaacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 21053642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 49621624 - 49621438
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  49621624 ctcataggcaaacgtaaatcttcatcatacacgcatataaaatcaaatttctttgaaaaacatctcataaaaaatgataagatattgtcattttataaca 49621525  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49621524 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 49621438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 26202707 - 26202522
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||| ||||| ||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26202707 ctcataggtaaacgcaaatcttcatcatacaagccaagaaaattaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 26202608  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26202607 taaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 26202522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 9525969 - 9526155
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  9525969 ctcataggcaaacgtaaatcttcatcatacaagcttataaaatcaaatttcttttaaaaaaatctcataaaaaatgataagatattgtcattttataaca 9526068  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  9526069 taaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgttattttgcct 9526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 21707763 - 21707948
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  21707763 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcttaaaaaatgataagatattgtcatttaataaca 21707862  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  21707863 taaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtattacctaaaataaagttaagagactaattgtgtaattttgcc 21707948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 42856962 - 42857147
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||    
T  42856962 ctcataggcaaacgtaaatcttcatcatacaagcttagaaaatcaaatttttttgaaaaaaatctcataaaaaatgataagatattgcaattttataaca 42857061  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42857062 taaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcc 42857147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 3546674 - 3546490
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  3546674 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaagaatctcataaaaaatgataagatattgtcattttataaca 3546575  T
Q  101 taaaggactaaatcgtga-cnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||||||||||||||||| |        |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  3546574 taaaggactaaatcgtgaccaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattatgtaattttg 3546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 33369697 - 33369508
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataa-aaaatgataagatattgtcattttataac 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  33369697 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaaatgataagatattgtcattttataac 33369598  T
Q  100 ataaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||| ||||||||||||||          || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33369597 ataaatgactaaatcgtgacaaaaaaaaaagaaaaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 33369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5260378 - 5260206
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5260378 ctcataggcagacgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 5260279  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    |||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5260278 taaaggactaaatcgtgac-aaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattg 5260206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 20931137 - 20931324
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  20931137 ctcataggcaaacgtaaatcttcatcatacaagcttagaaaatcaaatttctttgaaaaaaatatcataaaaaatgataagatattgtcattttataaca 20931236  T
Q  101 taaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||    
T  20931237 taaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttatctaaaataaagttaaggaactaatcgtgtaattttgcct 20931324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 41689577 - 41689389
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaa-aaaattctcataaaaaatgataagatattgtcattttataac 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||    
T  41689577 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaaaattcataaaaaatgataagatattgtcattttataac 41689478  T
Q  100 ataaaggactaaatcgtg--acnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||||  |         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41689477 ataaaggactaaatcgtgaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 41689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 46143433 - 46143617
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||    
T  46143433 tcataggcaaacgtaaatcttcatcata-aagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataaaatattatcattttataatat 46143531  T
Q  102 aaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  46143532 aaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcct 46143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 13294786 - 13294614
Alignment:
Q  3 cataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacata 102  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13294786 cataggcaaatgtaaatcttcatcatacaagcatagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataacata 13294687  T
Q  103 aaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 174  Q
    |||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||||    
T  13294686 aaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattg 13294614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 55140381 - 55140198
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  55140381 ctcataggcaaacgcaaatcttcattatacaagcctagaaaatcaaatttctttgaaaaaat-ctcataaaaaatgataagatattgtcattttataaaa 55140283  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  55140282 taaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaatcgtgtaattttgcc 55140198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 52690257 - 52690443
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  52690257 ctcataggcaa-cgcaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataaaaaatgataagatattgtcattttataaca 52690355  T
Q  101 taaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||| ||||||||||| ||          ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  52690356 taaacgactaaatcgtaaccaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 52690443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 37872944 - 37872767
Alignment:
Q  5 taggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaa 104  Q
    |||||||||||||||||||||| |||||||||||||||||||||      ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37872944 taggcaaacgtaaatcttcatcatacaagcctagaaaatcaaat------gaaaaaaatctcataaaaaatgataagatattgtcattttataacataaa 37872851  T
Q  105 ggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  37872850 ggactaaatcgtgacaaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcc 37872767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 23549659 - 23549847
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  23549659 tcataggcaaacgcaaatcttcatcatacaagcctagaaaattaaatttttttgaaaaaaatctcataaaaaatgatgagatattgtcattttataacat 23549758  T
Q  102 aaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||           |||||||||||||||| ||| ||||||||||||||||| |||||| |  |||||||||||    
T  23549759 aaaggactaaaccgtgacaaaaaaaaaaagataaaggacgaaagtattatctaaaataaagttaaggaactaatcgtataattttgcct 23549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 25297867 - 25297679
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| |||||||| || ||| |||||||||||||| ||||| |||||||||| |||||| ||||||||||| ||  ||||||||||||||    
T  25297867 ctcatagacaaacgcaaatcttcgtcatactagcctagaaaatcagatttcattgaaaaaat-ctcatacaaaaatgataaaattgtgtcattttataac 25297769  T
Q  100 ataaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||| ||          |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  25297768 ataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 2686164 - 2685985
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    ||||||| |||||| ||||| ||||| ||| |||||||||||||||||||| ||||||||| |||||| ||||||||||| |||  ||||||||||||||    
T  2686164 ctcatagacaaacgcaaatcgtcatcatactagcctagaaaatcaaatttcattgaaaaaa-tctcat-aaaaatgataaaatagcgtcattttataaca 2686067  T
Q  101 taaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||||||||| ||         | ||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  2686066 taaaggactaaatcgttacaaaaa----aaaaaagacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 2685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 55742793 - 55742621
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataaca 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||             ||||||||||||||| |    
T  55742793 ctcataggcaaacgtaaatcttcatcatacaagcctagaaaatcaaatttctttgaaaaaaatctcataa-------------attgtcattttataata 55742707  T
Q  101 taaaggactaaatcgtga-cnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||||          ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  55742706 taaaggactaaatcgtgataaaaaaaaagat-aaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcc 55742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 30055395 - 30055208
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    |||||||||||||| ||||||| ||| ||| || | ||||||||||||||  |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  30055395 ctcataggcaaacgcaaatctttatcatactagtcaagaaaatcaaattttattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 30055297  T
Q  100 ataaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    ||||||||||||||||| ||           ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  30055296 ataaaggactaaatcgttacaaaaaaataaaataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 49621661 - 49621784
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  49621661 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 49621760  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  49621761 gggactaattgtgtaattttgcct 49621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 13294847 - 13294949
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13294847 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 13294946  T
Q  185 cct 187  Q
    |||    
T  13294947 cct 13294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 23163403 - 23163281
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  23163403 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 23163304  T
Q  164 gggactaattgcgtaattttgcc 186  Q
    ||||||||||| |||||||||||    
T  23163303 gggactaattgtgtaattttgcc 23163281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 20931079 - 20930974
Alignment:
Q  82 atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatt 181  Q
    ||||||| ||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20931079 atattgttattttataacataaaagactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatt 20930980  T
Q  182 ttgcct 187  Q
    ||||||    
T  20930979 ttgcct 20930974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 30799505 - 30799391
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| |||| |||||| ||| |||||||||||||||||||| ||||||||  ||||||| ||||||||||| ||| ||||||||||||||    
T  30799505 ctcatagacaaacgcaaatattcatcatactagcctagaaaatcaaatttcattgaaaaa--tctcatacaaaaatgataaaatagtgtcattttataac 30799408  T
Q  100 ataaaggactaaatcgt 116  Q
    |||||||||||||||||    
T  30799407 ataaaggactaaatcgt 30799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 22335602 - 22335454
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||||||||| ||||| |||||||||||| ||||| ||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  22335602 aaatcttcatcatacaaacctagaaaatcagatttcattgaaaaaattc--ataaaaaatgagaagatattgtcattttataacgtaaaggaataaatcg 22335505  T
Q  116 tgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 167  Q
     ||         |||||| |||||||||||||||| |||| |||||||||||    
T  22335504 -gaacacaaaaagataaaagacgaaagtgttacctgaaattaagttaaggga 22335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 183
Target Start/End: Original strand, 33369735 - 33369854
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| ||||||    
T  33369735 tcataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaatatagttaa 33369834  T
Q  164 gggactaattgcgtaatttt 183  Q
    | ||||||||| ||||||||    
T  33369835 gagactaattgtgtaatttt 33369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 50977627 - 50977723
Alignment:
Q  16 aaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaa 112  Q
    ||||||||||| ||||| |||| ||||||| ||| | ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  50977627 aaatcttcatcatacaaacctaaaaaatcatattccattgaaaaaaatctcataaaaaatgatacgatattgtcattttataatataaaggactaaa 50977723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 9525930 - 9525805
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaa---ggacgaaagtgttacctaaaataaagt 160  Q
    ||||||||||||||||  || |||| ||||||||||||||| ||||||||||||||        ||||||   |||||||||||||||||||||||||||    
T  9525930 tcataaaaaatgataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaaaaggacgaaagtgttacctaaaataaagt 9525831  T
Q  161 taagggactaattgcgtaattttgcc 186  Q
    |||||||||||||| |||||||||||    
T  9525830 taagggactaattgtgtaattttgcc 9525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 42856925 - 42856803
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    ||||||||||||||||  || |||| ||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||| ||||    
T  42856925 tcataaaaaatgataactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattaa 42856827  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  42856826 gggactaattgtgtaattttgcct 42856803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 28458644 - 28458523
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagtta 162  Q
    |||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| ||||    
T  28458644 tcataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgtta 28458545  T
Q  163 agggactaattgcgtaattttg 184  Q
    |||||||||||| |||||||||    
T  28458544 agggactaattgtgtaattttg 28458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 46143394 - 46143273
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| |||||||||||||||||||||||| |||||        |||||||||||||| |||||||||||||||| ||||    
T  46143394 tcataaaaaaggataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaa 46143295  T
Q  164 gggactaattgcgtaattttgc 185  Q
    ||||||||||| ||||||||||    
T  46143294 gggactaattgtgtaattttgc 46143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 50161218 - 50161118
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 182  Q
    |||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50161218 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 50161119  T
Q  183 t 183  Q
    |    
T  50161118 t 50161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 55742831 - 55742954
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||         ||||||||||||||||||| |||||||||||||||    
T  55742831 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaa 55742930  T
Q  164 gggactaattgcgtaattttgcct 187  Q
     |||||||||| ||||||||||||    
T  55742931 aggactaattgtgtaattttgcct 55742954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 33692486 - 33692608
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||        |||||| |||||||||||||||||||||||| ||||    
T  33692486 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaaattaa 33692584  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  33692585 gggactaattgtgtaattttgcct 33692608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 37872986 - 37873109
Alignment:
Q  65 tcataaaaaatgataagata-ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    ||||||||||||||||  |  |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||| | ||||||||||||||    
T  37872986 tcataaaaaatgataactttgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttgcataaaataaagttaa 37873085  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||   |||||||||||    
T  37873086 gggactaattatataattttgcct 37873109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 3546712 - 3546837
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtt 161  Q
    ||||||||||||||||  || |||| |||||||||||||||||||||||| |||||          |||||| |||||||||||||||||||||||||||    
T  3546712 tcataaaaaatgataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaagataaatgacgaaagtgttacctaaaataaagtt 3546811  T
Q  162 aagggactaattgcgtaattttgcct 187  Q
    |||  |||||||| ||||||||||||    
T  3546812 aagaaactaattgtgtaattttgcct 3546837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 52690217 - 52690095
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||| ||||||||||||||||        |||||||||||||| | |||||||||||||||||||    
T  52690217 tcataaaaaaggataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaaggacgaaaatattacctaaaataaagttaa 52690119  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    | ||||||||| ||||||||||||    
T  52690118 gcgactaattgtgtaattttgcct 52690095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 30799350 - 30799295
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  30799350 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30799295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 30799611 - 30799668
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  30799611 gataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 376 - 505
Target Start/End: Original strand, 37531594 - 37531723
Alignment:
Q  376 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 475  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  37531594 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 37531693  T
Q  476 atttaacatatctaataaacatgtttttta 505  Q
    |||||| || |||||||| ||||| |||||    
T  37531694 atttaaaatgtctaataagcatgtatttta 37531723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 30055494 - 30055550
Alignment:
Q  131 aaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  30055494 aaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 30055550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 5260437 - 5260538
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||| || |||||| ||||        |||||||||||||| |||||||||||||||||||||  ||||||||  |||||||||    
T  5260437 ttgttattttataacataaatgattaaatcatgacaaaacaaagataaaggacgaaaatgttacctaaaataaagttaaaagactaattatgtaattttg 5260536  T
Q  185 cc 186  Q
    ||    
T  5260537 cc 5260538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 23549560 - 23549473
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 172  Q
    |||| ||||||||||||| ||||||||||||| ||        |||||| ||| ||||| ||||||||||||||||||||||||||||    
T  23549560 ttgttattttataacatagaggactaaatcgtaacaaaaaaaagataaaagactaaagtattacctaaaataaagttaagggactaat 23549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 32488642 - 32488583
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  32488642 gataaaggactaaattgttacctaaaataaagttaagggactaaaagtgtaattttgcct 32488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 183
Target Start/End: Original strand, 41689615 - 41689734
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||| |||| || ||        |||||||||||||| | |||| ||||||||||||||    
T  41689615 tcataaaaaaggataactatgttgttattttataacataaaggacaaaattgtaacaaaaaaaagataaaggacgaaaatattacttaaaataaagttaa 41689714  T
Q  164 gggactaattgcgtaatttt 183  Q
    ||| ||||||| ||||||||    
T  41689715 ggggctaattgtgtaatttt 41689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 505
Target Start/End: Complemental strand, 50158637 - 50158506
Alignment:
Q  374 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacat 473  Q
    |||||||||| | |||||||||||||||||||| |||  ||| ||||||||| |  |||||||      |||||||| | ||||||| ||||| | ||||    
T  50158637 atagtgaattaatggtaattttataaatttgttgaagatgttggagattactgggcaattatgtcaccaaaatattaaattcattaaaaaaatgtcacat 50158538  T
Q  474 caatttaacatatctaataaacatgtttttta 505  Q
    |||||||| || |||||||||||||| |||||    
T  50158537 caatttaaaatgtctaataaacatgtatttta 50158506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 53232328 - 53232372
Alignment:
Q  70 aaaaatgataagatattgtcattttataacataaaggactaaatc 114  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  53232328 aaaaataataagatattgtcattttataatataaaggactaaatc 53232372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 55140485 - 55140541
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 185  Q
    ||||||||||||||| |||| |||||||||||||| ||| |||||| ||||||||||    
T  55140485 ataaaggacgaaagtattacttaaaataaagttaaaggattaattgtgtaattttgc 55140541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 563681 - 563765
Alignment:
Q  28 tacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    ||||| |||| ||||||| ||| | |||||||||| |||||||||| ||| ||||||||| |||||||||||| ||||||||||||||    
T  563681 tacaaacctaaaaaatcatattccattgaaaaaat-ctcataaaaa-tgacaagatattg-cattttataacacaaaggactaaatcg 563765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 21053420 - 21053329
Alignment:
Q  65 tcataaaaaatgataaga-tattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaat 155  Q
    ||||||||||||||||   | |||| ||||||||||||||||||||||||||||||        |||||||||| ||| |||||||||||||    
T  21053420 tcataaaaaatgataactgtgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaaatgttacctaaaat 21053329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 25297969 - 25298023
Alignment:
Q  129 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    |||||||| |||| |||||| |||||| |||||||||||||||||| ||||||||    
T  25297969 ataaaggatgaaaatgttacttaaaattaagttaagggactaattgtgtaatttt 25298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 17872445 - 17872388
Alignment:
Q  58 aaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatcg 115  Q
    |||| ||||||||||| ||||||| | ||||||||||||| ||||||||||| |||||    
T  17872445 aaaaatctcataaaaattgataaggtgttgtcattttatagcataaaggactcaatcg 17872388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 23963107 - 23963147
Alignment:
Q  131 aaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  23963107 aaaggacgaaattgttacctaaaattaagttaagggactaa 23963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 9902711 - 9902652
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9902711 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 10993683 - 10993624
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  10993683 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 10993624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 20983972 - 20983913
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| | |||||||||||||||||||||||| ||  | ||||||||||||    
T  20983972 gataaaggactaaattattacctaaaataaagttaagggaccaaaagtgtaattttgcct 20983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 20984170 - 20984229
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  20984170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 20984229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 32922323 - 32922382
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  32922323 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 32922382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 42728384 - 42728442
Alignment:
Q  229 tactttgtgaactcaacataacaca--tgtattttttcattgttagatcccaccaagga 285  Q
    |||||||| ||||||||||||||||  ||||||||| |||||  |||||||||||||||    
T  42728384 tactttgttaactcaacataacacatttgtatttttccattgacagatcccaccaagga 42728442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 52654188 - 52654247
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  52654188 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 52654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 8646182 - 8646117
Alignment:
Q  47 atttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaat 113  Q
    ||||| |||||||||| ||||||||||| ||||  |||||| |||||||||||||||| || |||||    
T  8646182 atttcattgaaaaaat-ctcataaaaaaagatacaatattgacattttataacataaatgattaaat 8646117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 21360515 - 21360457
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  21360515 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 21360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 45655948 - 45656006
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||| ||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  45655948 gataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 45656006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 52538135 - 52538193
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52538135 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52538193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 52653989 - 52653931
Alignment:
Q  128 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52653989 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52653931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 9644808 - 9644767
Alignment:
Q  130 taaaggacgaaagtgttacctaaaataaagttaagggactaa 171  Q
    |||||||| ||| ||||||||||||| |||||||||||||||    
T  9644808 taaaggaccaaattgttacctaaaattaagttaagggactaa 9644767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 398
Target Start/End: Complemental strand, 22192611 - 22192582
Alignment:
Q  369 atagcatagtgaattgagggtaattttata 398  Q
    ||||||||||||||||||||||||||||||    
T  22192611 atagcatagtgaattgagggtaattttata 22192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 43914640 - 43914676
Alignment:
Q  77 ataagatattgtcattttataacataaaggactaaatc 114  Q
    |||||||||||||||||||||||||||| |||||||||    
T  43914640 ataagatattgtcattttataacataaa-gactaaatc 43914676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 128; Significance: 9e-66; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 196 - 543
Target Start/End: Complemental strand, 2959 - 2612
Alignment:
Q  196 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 295  Q
    |||||||||||||| ||||||||||||||  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||| ||||||   | |    
T  2959 tgtcacattattttaaaatgtctaatacacatgtactttgacaactcaacataacacatgcatttttccactgttagatcccaccaaagaccaaacatgg 2860  T
Q  296 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 395  Q
    | |||||| ||| ||  ||| |||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||    |||||   |||  |||||||||    
T  2859 aagtttttaaaggtcgtatagaaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtataggaaatagtcggttggaggtaatttt 2760  T
Q  396 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 495  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| || |||||||| |||||| | |||||||||||| || |||||| | |    
T  2759 atagatttgtagaaggagtttaagattactagataattatgctacctaaataatacactcattatgaaaatctcacatcaatttaaaatgtctaatcagc 2660  T
Q  496 atgttttttaaggataatgaacatttattttgttgactcaacatatca 543  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  2659 atgttttttaaggataataaacatgtattttgttgactcgacatatca 2612  T

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Target: scaffold0029 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 137079 - 137260
Alignment:
Q  4 ataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataa 103  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  137079 ataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctca--aaaaatgataagatattgtcattttataacataa 137176  T
Q  104 aggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||        ||||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  137177 aggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttgcct 137260  T

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Target: scaffold0029; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 137038 - 136915
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||    
T  137038 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 136939  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  136938 gggactaattgtgtaattttgcct 136915  T

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Target: scaffold0002 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 4 - 187
Target Start/End: Original strand, 330360 - 330541
Alignment:
Q  4 ataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataa 103  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  330360 ataggcaaacgtaaatcttcatcatacaagcatataaaatcaaatttctttgaaaaaaatctca--aaaaatgataagatattgtcattttataacataa 330457  T
Q  104 aggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||||||||||||||        ||||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  330458 aggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttgcct 330541  T

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Target: scaffold0002; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 330319 - 330196
Alignment:
Q  65 tcataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 163  Q
    |||||||||| |||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||    
T  330319 tcataaaaaaggataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 330220  T
Q  164 gggactaattgcgtaattttgcct 187  Q
    ||||||||||| ||||||||||||    
T  330219 gggactaattgtgtaattttgcct 330196  T

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Target: scaffold1577 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 1034 - 1214
Alignment:
Q  2 tcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacat 101  Q
    |||||| |||||| ||||||| ||||||||| |||||||||||| ||||| |||||||||| |||||||||||| |||| |||| ||||||||||| |||    
T  1034 tcatagacaaacgcaaatctttatcgtacaaccctagaaaatcacatttcattgaaaaaat-ctcataaaaaataataaaatatagtcattttatatcat 1132  T
Q  102 aaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 183  Q
    ||| ||||||||||||||        ||||||| |||| ||||||||||||||| || |||| |||||||||| ||||||||    
T  1133 aaaagactaaatcgtgacaaaaaaaagataaagaacgagagtgttacctaaaattaaattaaaggactaattgtgtaatttt 1214  T

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Target: scaffold0311 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 12782 - 12632
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||||||||| ||| || | ||||||||||||||| |||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  12782 ctcatagacaaacgcaaatcttcatcatactagtcaagaaaatcaaatttcattgaaaaaat-ctcatacaaaaatgataaaatagtgtcattttataac 12684  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttaccta 151  Q
    ||||||||||||||||| ||        ||||||||||||||||||||||||    
T  12683 ataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttaccta 12632  T

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Target: scaffold0311; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 12841 - 12943
Alignment:
Q  85 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 184  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  12841 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttg 12940  T
Q  185 cct 187  Q
    |||    
T  12941 cct 12943  T

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Target: scaffold0347 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 12098 - 12280
Alignment:
Q  1 ctcataggcaaacgtaaatcttcatcgtacaagcctagaaaatcaaatttctttgaaaaaattctcata-aaaaatgataagatattgtcattttataac 99  Q
    ||||||| |||||| ||||| ||||  ||| |||| ||||||||||||||| ||||||||| ||||||| ||||||||||| ||| ||||||||||||||    
T  12098 ctcatagacaaacggaaatcatcattatactagccaagaaaatcaaatttcattgaaaaaa-tctcatacaaaaatgataaaatagtgtcattttataac 12196  T
Q  100 ataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 187  Q
    ||||| ||| ||  ||| ||        | |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12197 ataaa-gaccaa--cgttacaaaaaaagg-taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

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Target: scaffold0347; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 11995 - 11940
Alignment:
Q  131 aaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 186  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  11995 aaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 505
Target Start/End: Original strand, 96248 - 96377
Alignment:
Q  376 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 475  Q
    ||||||||||||||||||||||| ||||||| |||  ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  96248 agtgaattgagggtaattttatagatttgttgaagatgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 96347  T
Q  476 atttaacatatctaataaacatgtttttta 505  Q
    |||||| || |||||||| ||||| |||||    
T  96348 atttaaaatgtctaataagcatgtatttta 96377  T

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Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 15232 - 15310
Alignment:
Q  34 cctagaaaatcaaatttctttgaaaaaattctcataaaaaatgataagatattgtcattttataacataaaggactaaatc 114  Q
    |||||||||| | ||||| | ||||||  ||| ||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  15232 cctagaaaattagatttcatcgaaaaa--tcttataaaaaattataagaaattgtcattttataacataaagaactaaatc 15310  T

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Target: scaffold0114 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 1115 - 1070
Alignment:
Q  373 catagtgaattgagggtaattttataaatttgttaaaggagttaga 418  Q
    |||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  1115 catagtaaattgatggtaattatataagtttgttaaaggagttaga 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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